# terms

id: PR:000050560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the tif211 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC3G9.09c","termid":"PR:000050560"}


id: PBO:0085650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in microtubule morphogenesis; required for protection from excess free beta-tubulin; proposed to be involved the folding of beta-tubulin; similar to mouse beta-tubulin cofactor A; protein abundance increases in response to DNA replication stress","termid":"PBO:0085650"}


id: GO:0015826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of threonine, (2R*,3S*)-2-amino-3-hydroxybutanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"threonine transport","synonyms":[{"name":"L-threonine transport","type":"narrow"}],"termid":"GO:0015826"}


id: MONDO:0014606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-microcephaly-strabismus-behavioral abnormalities syndrome is a rare, genetic, syndromic intellectual disability disorder characterized by craniofacial dysmorphism (microcephaly, hypotonic facies, strabismus, long and flat malar region, posteriorly rotated ears, flat nasal bridge with broad nasal tip, short philtrum, thin vermillion border, open mouth with down-turned corners, high arched palate, pointed chin), global developmental delay, intellectual disability and variable neurobehavioral abnormalities (autism spectrum disorder, aggressiveness, self injury). Additional features include vision abnormalities and variable sensorineural hearing loss, as well as short stature, hypotonia and gastrointestinal manifestations (e.g. poor feeding, gastroesophageal reflux, constipation).","definition_xrefs":["Orphanet:468678"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability-microcephaly-strabismus-behavioral abnormalities syndrome","secondary_identifiers":["OMIM:616364","GARD:13774","UMLS:C4225351","DOID:0070067","MEDGEN:897984"],"synonyms":[{"name":"MRD37","type":"exact"},{"name":"WHITE-Sutton syndrome","type":"related"},{"name":"WHSUS","type":"exact"},{"name":"White-Sutton syndrome","type":"related"},{"name":"autosomal dominant intellectual disability 37","type":"exact"},{"name":"autosomal dominant mental retardation 37","type":"exact"},{"name":"intellectual disability, autosomal dominant 37","type":"related"},{"name":"intellectual disability, autosomal dominant type 37","type":"exact"},{"name":"intellectual disability-microcephaly-strabismus-behavioral abnormalities syndrome","type":"exact"},{"name":"mental retardation, autosomal dominant 37","type":"related"},{"name":"mental retardation, autosomal dominant type 37","type":"exact"}],"termid":"MONDO:0014606","xrefs":{"Monarch":{"xref_id":"0014606"}}}


id: SO:0001781
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant arising in the offspring that is not found in either of the parents.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de_novo_variant","synonyms":[{"name":"de novo variant","type":"exact"}],"termid":"SO:0001781"}


id: PBO:0052224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 2","termid":"PBO:0052224"}


id: PBO:0042960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 2","termid":"PBO:0042960"}


id: MONDO:0009429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemia, renal, with intracerebral calcifications","secondary_identifiers":["MEDGEN:383776","OMIM:241519","UMLS:C1855809","MESH:C565478"],"synonyms":[{"name":"hypophosphatemia, renal, with intracerebral calcifications","type":"exact"}],"termid":"MONDO:0009429","xrefs":{"Monarch":{"xref_id":"0009429"}}}


id: GO:1901914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"negatively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of capsule organization","synonyms":[{"name":"down regulation of capsule organisation","type":"exact"},{"name":"down regulation of capsule organization","type":"exact"},{"name":"down regulation of capsule organization and biogenesis","type":"related"},{"name":"down-regulation of capsule organisation","type":"exact"},{"name":"down-regulation of capsule organization","type":"exact"},{"name":"down-regulation of capsule organization and biogenesis","type":"related"},{"name":"downregulation of capsule organisation","type":"exact"},{"name":"downregulation of capsule organization","type":"exact"},{"name":"downregulation of capsule organization and biogenesis","type":"related"},{"name":"inhibition of capsule organisation","type":"narrow"},{"name":"inhibition of capsule organization","type":"narrow"},{"name":"inhibition of capsule organization and biogenesis","type":"related"},{"name":"negative regulation of capsule organisation","type":"exact"},{"name":"negative regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901914"}


id: PBO:0068288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease K","termid":"PBO:0068288"}


id: PBO:0036050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036050"}


id: FYPO:0000619
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121472],"is_not":false,"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[121473],"is_not":false,"summary":null,"term":"FYPO:0000619"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in anaphase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":2,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"abnormal cell cycle arrest in mitotic anaphase","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta"],"synonyms":[{"name":"abnormal cell cycle arrest in anaphase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase with condensed chromosomes","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in anaphase","type":"exact"},{"name":"mitotic cell cycle progression in late anaphase: arrested","type":"narrow"}],"termid":"FYPO:0000619","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: PR:G2TRQ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.19","synonyms":[{"name":"Spom972h-tam10","type":"exact"},{"name":"transcripts altered in meiosis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRQ9"}


id: PBO:0030999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_vegetative_growth","termid":"PBO:0030999"}


id: GO:0047788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(2-hydroxyphenyl)propanoate + NAD+ = trans-2-coumarate + H+ + NADH.","definition_xrefs":["RHEA:21444","EC:1.3.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-coumarate reductase activity","secondary_identifiers":["KEGG_REACTION:R03709","MetaCyc:COUMARATE-REDUCTASE-RXN"],"synonyms":[{"name":"3-(2-hydroxyphenyl)propanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"coumarate reductase activity","type":"exact"},{"name":"melilotate dehydrogenase activity","type":"related"}],"termid":"GO:0047788"}


id: PBO:0091377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family heat shock protein Ssa1","termid":"PBO:0091377"}


id: PBO:0088037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin conjugating enzyme; involved in the ER-associated protein degradation (ERAD) pathway and in the inner nuclear membrane-associated degradation (INMAD) pathway; requires Cue1p for recruitment to the ER membrane; proposed to be involved in chromatin assembly","termid":"PBO:0088037"}


id: GO:0004395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-hexaprenyl-4,5-dihydroxybenzoate = S-adenosyl-L-homocysteine + 3-hexaprenyl-4-hydroxy-5-methoxybenzoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hexaprenyldihydroxybenzoate methyltransferase activity (obsolete GO:0004395)","termid":"GO:0004395"}


id: GO:0042853
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70363],"is_not":false,"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine catabolic process","termid":"GO:0006524"},{"relation_name":"is_a","term_name":"pyruvate family amino acid catabolic process","termid":"GO:0009080"},{"relation_name":"is_a","term_name":"L-alanine metabolic process","termid":"GO:0042851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-alanine catabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"L-alanine breakdown","type":"exact"},{"name":"L-alanine catabolism","type":"exact"},{"name":"L-alanine degradation","type":"exact"}],"termid":"GO:0042853","terms_by_termid":{"GO:0042853":null}}


id: MONDO:0006935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The obstruction of the right ventricular outflow tract that originates within the body of the right ventricle, that exists at the time of birth; it often occurs in association with other intracardiac anomalies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary valve stenosis","termid":"MONDO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pulmonary subvalvular stenosis","secondary_identifiers":["DOID:8861","NANDO:2200276","ICD9:746.83","NANDO:2100092","SCTID:204370002","EFO:1001137","UMLS:C0034084","MESH:D011662","MEDGEN:11030","NCIT:C34961","ICD10CM:Q24.3"],"synonyms":[{"name":"congenital infundibular stenosis","type":"exact"},{"name":"infundibular pulmonic stenosis","type":"exact"},{"name":"infundibular pulmonic stenosis, congenital","type":"exact"},{"name":"pulmonary infundibular stenosis","type":"exact"},{"name":"subvalvular pulmonic stenosis","type":"exact"}],"termid":"MONDO:0006935","xrefs":{"Monarch":{"xref_id":"0006935"}}}


id: MONDO:0100411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloid leukemia, NPM1 gene mutation (obsolete MONDO:0100411)","termid":"MONDO:0100411","xrefs":{"Monarch":{"xref_id":"0100411"}}}


id: MONDO:0032573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"bone marrow failure syndrome 5","secondary_identifiers":["UMLS:C4748488","MEDGEN:1648380","OMIM:618165"],"synonyms":[{"name":"BMFS5","type":"related"},{"name":"BONE MARROW FAILURE SYNDROME 5","type":"related"}],"termid":"MONDO:0032573","xrefs":{"Monarch":{"xref_id":"0032573"}}}


id: PBO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.17","termid":"PBO:0002621"}


id: MONDO:0019569
data:
  {"annotated_genes":["SJAG_04540"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87955],"is_not":false,"summary":null,"term":"MONDO:0019569"}]},"cv_name":"mondo","definition":"Cockayne syndrome caused by mutation(s) in the ERCC8 gene, encoding DNA excision repair protein ERCC-8.","definition_xrefs":["NCIT:C135725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cockayne syndrome","termid":"MONDO:0016006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005066","MONDO:0006025","MONDO:0021190"],"is_obsolete":false,"name":"Cockayne syndrome type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:216400","DOID:0080907","GARD:1415","MEDGEN:155488","icd11.foundation:1271368066","Orphanet:90321","UMLS:C0751039"],"synonyms":[{"name":"CSA","type":"related"},{"name":"Cockayne syndrome A","type":"exact"},{"name":"Cockayne syndrome caused by mutation in ERCC8","type":"exact"},{"name":"Cockayne syndrome classic form","type":"related"},{"name":"Cockayne syndrome classical","type":"related"},{"name":"Cockayne syndrome type 1","type":"exact"},{"name":"Cockayne syndrome type A","type":"related"},{"name":"Cockayne syndrome type I","type":"exact"},{"name":"Cockayne syndrome type a","type":"exact"},{"name":"Cockayne syndrome, type A","type":"exact"},{"name":"ERCC8 Cockayne syndrome","type":"exact"}],"termid":"MONDO:0019569","terms_by_termid":{"MONDO:0019569":null},"xrefs":{"Monarch":{"xref_id":"0019569"}}}


id: GO:0046922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-L-fucosyl residue from GDP-beta-L-fucose to the serine hydroxy group of a protein acceptor.","definition_xrefs":["EC:2.4.1.221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"peptide-O-fucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.221-RXN","Reactome:R-HSA-5173192","Reactome:R-HSA-1912349"],"synonyms":[{"name":"GDP-L-fucose:polypeptide fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:polypeptide O-alpha-L-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose protein O-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:polypeptide fucosyltransferase activity","type":"related"}],"termid":"GO:0046922"}


id: GO:0160118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(7) in tRNA + S-adenosyl-L-methionine = H+ + N(2)-methylguanosine(7) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:34669960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0140101","GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"tRNA (guanine(7)-N2)-methyltransferase activity","termid":"GO:0160118"}


id: PATO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pressure which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pressure","termid":"PATO:0001025"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased pressure","synonyms":[{"name":"high pressure","type":"exact"}],"termid":"PATO:0001576"}


id: MONDO:0008085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuropathy, hereditary sensorimotor, with upper motor neuron, visual pathway and autonomic disturbance (obsolete MONDO:0008085)","secondary_identifiers":["MESH:C563517","OMIM:162380"],"synonyms":[{"name":"neuropathy, hereditary sensorimotor, with upper motor neuron, visual pathway and autonomic disturbance","type":"exact"}],"termid":"MONDO:0008085","xrefs":{"Monarch":{"xref_id":"0008085"}}}


id: GO:0003034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in an aortic body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of increased carbon dioxide by chemoreceptor signaling","termid":"GO:0003021"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","termid":"GO:0003033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003034"}


id: GO:0141135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a chemokine signaling pathway, a G protein-coupled receptor signal transduction pathway activated by a chemokine. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16581912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host G protein-coupled receptor signal transduction","termid":"GO:0075120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host chemokine signal transduction pathway","termid":"GO:0141135"}


id: SO:1001274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The incorporation of selenocysteine into a protein sequence is directed by an in-frame UGA codon (usually a stop codon) within the coding region of the mRNA. Selenoprotein mRNAs contain a conserved secondary structure in the 3' UTR that is required for the distinction of UGA stop from UGA selenocysteine. The selenocysteine insertion sequence (SECIS) is around 60 nt in length and adopts a hairpin structure which is sufficiently well-defined and conserved to act as a computational screen for selenoprotein genes.","direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SECIS_element","secondary_identifiers":["http://en.wikipedia.org/wiki/SECIS_element"],"synonyms":[{"name":"SECIS element","type":"exact"}],"termid":"SO:1001274"}


id: SO:0000070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene and on the opposite strand.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inside_intron","termid":"SO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron_antiparallel","synonyms":[{"name":"inside intron antiparallel","type":"exact"}],"termid":"SO:0000070"}


id: PBO:0084507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific subunit of the t-SNARE complex; required for prospore membrane formation during sporulation; similar to but not functionally redundant with Sec9p; binds to phosphatidic acid; SNAP-25 homolog","termid":"PBO:0084507"}


id: PATO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular placement quality inhering in a bearer by virtue of the bearer being changed in position in relation to another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced to","synonyms":[{"name":"mislocalised to","type":"related"}],"termid":"PATO:0002168"}


id: PBO:0082051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' DNA helicase of the conserved RecQ family; involved in Pso2p-mediated interstrand crosslink repair; acts with Rad4p in nucleotide-excision repair; binds telomeres, modulates telomerase activity with Pif1p and inhibits telomere addition to dsDNA breaks; role in telomerase-independent telomere maintenance; lacks ssDNA annealing and strand exchange activities; human RecQL4, a structural and functional homolog, is involved in Rothmund-Thomson, Baller-Gerold and RAPADILINO syndromes","termid":"PBO:0082051"}


id: GO:0022416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a chaeta over time, from its formation to the mature structure. A chaeta is a sensory multicellular cuticular outgrowth of a specifically differentiated cell.","definition_xrefs":["GOC:bf","GOC:isa_complete","GOC:dos","GOC:cjm","FBbt:00005177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chaeta development","synonyms":[{"name":"bristle development","type":"narrow"}],"termid":"GO:0022416"}


id: PBO:0030788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_volume_spherical_vegetative_cell","termid":"PBO:0030788"}


id: GO:0031080
data:
  {"annotated_genes":["SJAG_03907","SJAG_01374","SJAG_01293","SJAG_04017","SJAG_00471","SJAG_02424","SJAG_03986","SJAG_03299","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72291,73659,74686,74897,75640,75887,82294,90951,111842],"is_not":false,"summary":null,"term":"GO:0031080"}]},"cv_name":"cellular_component","definition":"A subcomplex of the nuclear pore complex (NPC) that forms the outer rings of the core scaffold, a lattice-like structure that gives the NPC its shape and strength. In S. cerevisiae, the two outer rings each contain multiple copies of the following proteins: Nup133p, Nup120p, Nup145Cp, Nup85p, Nup84p, Seh1p, and Sec13p. In vertebrates, the two outer rings each contain multiple copies of the following proteins: Nup133, Nup160, Nup96, Nup75, Nup107, Seh1, Sec13, Nup43, Nup37, and ALADIN. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. A single 'spoke', can be isolated and is sometimes referred to as the Nup84 complex (S. cerevisiae) or the Nup107-160 complex (vertebrates).","definition_xrefs":["PMID:19524430","PMID:18046406","PMID:20947011","PMID:22419078","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00471":null,"SJAG_01293":null,"SJAG_01374":null,"SJAG_02424":null,"SJAG_03299":null,"SJAG_03907":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005643","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear pore outer ring","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Nup107-120 complex","type":"exact"},{"name":"Nup107-160 complex","type":"exact"},{"name":"Nup84 complex","type":"exact"}],"termid":"GO:0031080","terms_by_termid":{"GO:0031080":null}}


id: MONDO:1040017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intestinal disorder characterized by an opening in the intestine to some epithelial surface.","definition_xrefs":["PMID:30480947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal fistula","secondary_identifiers":["MEDGEN:5862","UMLS:C0021833"],"termid":"MONDO:1040017","xrefs":{"Monarch":{"xref_id":"1040017"}}}


id: PBO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.4.2","termid":"PBO:0000186"}


id: PR:Q10086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C11D3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.07c","synonyms":[{"name":"Spom972h-toe4","type":"exact"}],"termid":"PR:Q10086"}


id: FYPO:0005750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Zeocin (phleomycin D1). Cells stop growing (and may die) at a concentration of Zeocin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to Zeocin","synonyms":[{"name":"hypersensitive to Zeocin","type":"exact"},{"name":"sensitive to Zeocin during mitotic cell cycle","type":"related"},{"name":"sensitive to Zeocin during vegetative growth","type":"exact"},{"name":"sensitive to phleomycin D1","type":"exact"}],"termid":"FYPO:0005750"}


id: PATO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001219 area_unit (obsolete PATO:0001219)","termid":"PATO:0001219"}


id: GO:1903815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["GO_REF:0000058","PMID:23897233","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of collecting lymphatic vessel constriction","termid":"GO:1903814"},{"relation_name":"negatively_regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"down regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"down regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"down-regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"down-regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"downregulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"downregulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"inhibition of collecting lymphatic vessel constriction","type":"narrow"},{"name":"inhibition of lymphatic vessel myogenic constriction","type":"narrow"},{"name":"negative regulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903815"}


id: GO:0007258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into a JUN protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"part_of","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"JUN phosphorylation","termid":"GO:0007258"}


id: GO:0048319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the axial mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm morphogenesis","termid":"GO:0048332"},{"relation_name":"part_of","term_name":"axial mesoderm development","termid":"GO:0048318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm morphogenesis","termid":"GO:0048319"}


id: MONDO:0005473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any condition affecting the anatomic and functional characteristics of the temporomandibular joint.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporomandibular joint disorder","secondary_identifiers":["ICD9:524.60","MESH:D013705","NCIT:C63709","SCTID:41888000","UMLS:C0039494","EFO:0005279","ICD9:524.69","MEDGEN:21092"],"synonyms":[{"name":"TMD","type":"exact"}],"termid":"MONDO:0005473","xrefs":{"Monarch":{"xref_id":"0005473"}}}


id: PBO:0072594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radical S-adenosyl methionine domain containing 1","termid":"PBO:0072594"}


id: PBO:0048644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 4","termid":"PBO:0048644"}


id: GO:0048184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to the peptide hormone follistatin.","definition_xrefs":["GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete follistatin binding (obsolete GO:0048184)","synonyms":[{"name":"follistatin binding","type":"exact"}],"termid":"GO:0048184"}


id: MONDO:0004813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pneumothorax in which air enters into the pleural cavity.","definition_xrefs":["DOID:9534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous pneumothorax","secondary_identifiers":["SCTID:29731002","ICD9:011.7","ICD9:011.70","ICD9:011.71","ICD9:011.76","ICD9:011.73","UMLS:C0152600","ICD9:011.72","MEDGEN:509067"],"termid":"MONDO:0004813","xrefs":{"Monarch":{"xref_id":"0004813"}}}


id: PBO:0045147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 5","termid":"PBO:0045147"}


id: GO:0120190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:22767443","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of bile acid secretion","termid":"GO:0120188"},{"relation_name":"negatively_regulates","term_name":"bile acid secretion","termid":"GO:0032782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of bile acid secretion","termid":"GO:0120190"}


id: PBO:0090762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Vps15","termid":"PBO:0090762"}


id: PBO:0089877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 1 Tsr401","termid":"PBO:0089877"}


id: PATO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in a homogeneous substance containing 6.02 x 1023 atoms or molecules.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Molar_mass"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass","termid":"PATO:0000125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molar mass","termid":"PATO:0001681"}


id: MONDO:0032601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory bowel disease, immunodeficiency, and encephalopathy","secondary_identifiers":["OMIM:618213","GARD:18000","Orphanet:565788","UMLS:C4748708","MEDGEN:1648434"],"synonyms":[{"name":"IBDIMDE","type":"related"},{"name":"INFLAMMATORY BOWEL DISEASE, IMMUNODEFICIENCY, AND ENCEPHALOPATHY","type":"related"}],"termid":"MONDO:0032601","xrefs":{"Monarch":{"xref_id":"0032601"}}}


id: FYPO:0006800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is decreased during interphase of the mitotic cell cycle. Centromere-kinetochore complexes normally cluster near the old spindle pole body during mitotic interphase.","definition_xrefs":["PMID:29180432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal centromere clustering at nuclear periphery during vegetative growth","termid":"FYPO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased centromere clustering at nuclear periphery during mitotic interphase","synonyms":[{"name":"centromere declustering during mitotic interphase","type":"exact"},{"name":"decreased centromere clustering at SPB during mitotic interphase","type":"related"},{"name":"decreased centromere clustering at nuclear periphery during interphase during vegetative growth","type":"exact"},{"name":"decreased centromere clustering at nuclear periphery during interphase of mitotic cell cycle","type":"related"},{"name":"decreased centromere clustering at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased centromere-SPB clustering during mitotic interphase","type":"related"},{"name":"decreased inter-centromere connection during mitotic interphase","type":"exact"},{"name":"decreased kinetochore clustering at SPB during mitotic interphase","type":"related"},{"name":"decreased kinetochore clustering at old mitotic spindle pole body during mitotic interphase","type":"related"},{"name":"decreased kinetochore clustering at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased kinetochore localization at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased mitotic centromere clustering at nuclear periphery during mitotic interphase","type":"exact"}],"termid":"FYPO:0006800"}


id: MONDO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic reaction to products containing processed natural rubber latex such as rubber gloves, condoms, catheters, dental dams, balloons, and sporting equipment. Both T-cell mediated (hypersensitivity, delayed) and IgE antibody-mediated (hypersensitivity, immediate) allergic responses are possible. Delayed hypersensitivity results from exposure to antioxidants present in the rubber; immediate hypersensitivity results from exposure to a latex protein.","definition_xrefs":["MESH:D020315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"latex allergy","secondary_identifiers":["DOID:0060532","ICD9:995.3","MEDGEN:107909","SCTID:300916003","ICD9:V15.07","UMLS:C0577628","ICD9:989.82"],"termid":"MONDO:0000807","xrefs":{"Monarch":{"xref_id":"0000807"}}}


id: PBO:0055429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2859","termid":"PBO:0055429"}


id: PBO:0012226
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type cyclin pombe","termid":"PBO:0012226"}


id: PATO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's one part being layered over another connected part.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folded","termid":"PATO:0001910"}


id: PBO:0051453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-48 (non-functional)","termid":"PBO:0051453"}


id: GO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in kidney development","termid":"GO:0072111"}


id: GO:0016075
data:
  {"annotated_genes":["SJAG_01191","SJAG_05029","SJAG_04818","SJAG_04264","SJAG_00854","SJAG_03276","SJAG_04153","SJAG_04321","SJAG_03984","SJAG_03179","SJAG_04283","SJAG_01818","SJAG_04084","SJAG_03728","SJAG_01521","SJAG_04824","SJAG_04006","SJAG_03745","SJAG_03507"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79788,99687,115262,115814],"is_not":false,"summary":null,"term":"GO:0016075"},{"annotations":[109517,109429,117443,120320,106355,117882,99443,104036,108434,95022,99188,94190,76435,107225,97864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070651"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of rRNA, ribosomal RNA, a structural constituent of ribosomes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"rRNA metabolic process","termid":"GO:0016072"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03276":null,"SJAG_03507":null,"SJAG_03728":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04264":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"rRNA breakdown","type":"exact"},{"name":"rRNA catabolism","type":"exact"},{"name":"rRNA degradation","type":"exact"}],"termid":"GO:0016075","terms_by_termid":{"GO:0016075":null,"GO:0070651":null}}


id: PBO:0049653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 7","termid":"PBO:0049653"}


id: MONDO:0006256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that infiltrates the breast parenchyma. The vast majority are adenocarcinomas arising from the terminal ductal lobular unit (TDLU). Often, the invasive adenocarcinoma co-exists with ductal or lobular carcinoma in situ. It is the most common carcinoma affecting women.","definition_xrefs":["NCIT:C9245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"},{"relation_name":"is_a","term_name":"invasive carcinoma","termid":"MONDO:0040677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive breast carcinoma","secondary_identifiers":["ONCOTREE:BRCA","MEDGEN:163435","UMLS:C0853879","EFO:1000307","SCTID:713609000"],"synonyms":[{"name":"BRCA","type":"related"},{"name":"infiltrating breast cancer","type":"exact"},{"name":"infiltrating breast carcinoma","type":"exact"},{"name":"infiltrating carcinoma of breast","type":"exact"},{"name":"infiltrating carcinoma of the breast","type":"exact"},{"name":"invasive breast cancer","type":"exact"},{"name":"invasive breast carcinoma","type":"exact"},{"name":"invasive carcinoma of breast","type":"exact"},{"name":"invasive carcinoma of the breast","type":"exact"},{"name":"invasive mammary carcinoma","type":"exact"}],"termid":"MONDO:0006256","xrefs":{"Monarch":{"xref_id":"0006256"}}}


id: GO:0008523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: multivitamin(out) + Na+(out) = multivitamin(in) + Na+(in). Multivitamins include pantothenate, biotin and lipoate.","definition_xrefs":["TC:2.A.21.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sodium-dependent multivitamin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-199219","Reactome:R-HSA-199206","Reactome:R-HSA-429581"],"termid":"GO:0008523"}


id: MONDO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CD3delta deficiency (obsolete MONDO:0000576)","termid":"MONDO:0000576","xrefs":{"Monarch":{"xref_id":"0000576"}}}


id: GO:0015938
data:
  {"annotated_genes":["SJAG_02247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79911],"is_not":false,"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A metabolic process","termid":"GO:0015936"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"coenzyme A catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0006765"],"synonyms":[{"name":"CoA catabolism","type":"exact"},{"name":"coenzyme A breakdown","type":"exact"},{"name":"coenzyme A catabolism","type":"exact"},{"name":"coenzyme A degradation","type":"exact"}],"termid":"GO:0015938","terms_by_termid":{"GO:0015938":null}}


id: GO:0042638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shedding phase of the hair cycle.","definition_xrefs":["PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle phase","termid":"GO:0044851"},{"relation_name":"part_of","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exogen","synonyms":[{"name":"hair shedding","type":"narrow"}],"termid":"GO:0042638"}


id: GO:1903227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthosine.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:7559336","PMID:7007809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"xanthosine metabolic process","synonyms":[{"name":"xanthosine metabolism","type":"exact"}],"termid":"GO:1903227"}


id: PBO:0073036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 1","termid":"PBO:0073036"}


id: MONDO:0020012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic or rheumatic disease (obsolete MONDO:0020012)","termid":"MONDO:0020012","xrefs":{"Monarch":{"xref_id":"0020012"}}}


id: PBO:0079090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-3","termid":"PBO:0079090"}


id: MONDO:0013953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary immunodeficiency disease in which the cause of the disease is a mutation in the IFNGR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 28","secondary_identifiers":["MEDGEN:862384","OMIM:614889","DOID:0111995","UMLS:C4013947"],"synonyms":[{"name":"IFNGR2 primary immunodeficiency disease","type":"exact"},{"name":"IMD28","type":"related"},{"name":"Ifngr2 deficiency","type":"related"},{"name":"immunodeficiency 28","type":"exact"},{"name":"immunodeficiency 28, Mycobacteriosis","type":"related"},{"name":"immunodeficiency type 28","type":"exact"},{"name":"primary immunodeficiency disease caused by mutation in IFNGR2","type":"exact"}],"termid":"MONDO:0013953","xrefs":{"Monarch":{"xref_id":"0013953"}}}


id: GO:0033836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol = UDP + a flavonol 7-O-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"flavonol 7-O-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.237-RXN","RHEA:23164"],"synonyms":[{"name":"UDP-glucose:flavonol 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:flavonol 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0033836"}


id: PBO:0050192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene","termid":"PBO:0050192"}


id: PBO:0120091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minus-end-directed microtubule motor; functions in mitosis and meiosis; localizes to the spindle pole body and localization is dependent on functional Cik1p; required for nuclear fusion during mating; required for ER-associated degradation (ERAD); potential Cdc28p substrate; kinesin 14 family member with a C-terminal motor domain","termid":"PBO:0120091"}


id: PBO:0046530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum lumenal protein 29 pseudogene 1","termid":"PBO:0046530"}


id: PBO:0075367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX5 pseudogene 1","termid":"PBO:0075367"}


id: PBO:0063349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pecanex 3","termid":"PBO:0063349"}


id: GO:0001949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epidermal cell acquires the specialized features of a sebaceous gland cell.","definition_xrefs":["PMID:15737203","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell differentiation","termid":"GO:0009913"},{"relation_name":"part_of","term_name":"sebaceous gland development","termid":"GO:0048733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland cell differentiation","synonyms":[{"name":"sebocytes differentiation","type":"narrow"}],"termid":"GO:0001949"}


id: GO:0017184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthamide, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthamide catabolic process (obsolete GO:0017184)","synonyms":[{"name":"peptidyl-diphthamide breakdown","type":"exact"},{"name":"peptidyl-diphthamide catabolism","type":"exact"},{"name":"peptidyl-diphthamide degradation","type":"exact"}],"termid":"GO:0017184"}


id: PBO:0040089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase family member I","termid":"PBO:0040089"}


id: MONDO:0017857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida-hypospadias syndrome is a rare developmental defect during embryogenesis characterized by the specific association of glandular hypospadias and lumbo-sacral spina bifida. Affected individuals may or may not present additional congenital anomalies, such as hydrocephaly, microstomia, patent ductus arteriosus, cryptorchidism, intestinal malrotation, rocker-bottom feet, and hypertrichosis.","definition_xrefs":["Orphanet:3176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida-hypospadias syndrome","secondary_identifiers":["UMLS:C4706660","GARD:4940","MEDGEN:1638294"],"termid":"MONDO:0017857","xrefs":{"Monarch":{"xref_id":"0017857"}}}


id: GO:0001324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in non-dividing cells as they age as a result of oxidative stress, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to oxidative stress involved in chronological cell aging (obsolete GO:0001324)","synonyms":[{"name":"age-dependent response to oxidative stress during chronological cell ageing","type":"related"},{"name":"age-dependent response to oxidative stress during chronological cell aging","type":"related"}],"termid":"GO:0001324"}


id: GO:0019083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.","definition_xrefs":["ISBN:0781702534","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral gene expression","termid":"GO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral transcription","secondary_identifiers":["Reactome:R-HSA-168273","Reactome:R-HSA-167172"],"termid":"GO:0019083"}


id: PBO:0056988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 31","termid":"PBO:0056988"}


id: PR:Q09866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein mio that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C12G12.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.01c","secondary_identifiers":["UniProtKB:Q09866"],"synonyms":[{"name":"Spom972h-MIOS","type":"exact"}],"termid":"PR:Q09866"}


id: GO:0016269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 3 O-glycan structure, GlcNAc-beta-(1->3)-GalNAc, which ultimately forms the core 3 O-glycan structure, GlcNAc-beta-(1->6)[GalNAc-beta-(1->3)]-GalNAc.","definition_xrefs":["PMID:10580130","PMID:33775405"],"gene_count":0,"genotype_count":0,"name":"obsolete core 3 and core 4 O-glycan biosynthetic process (obsolete GO:0016269)","synonyms":[{"name":"O-glycan processing, core 3","type":"exact"},{"name":"core 3 O-glycan biosynthesis","type":"exact"}],"termid":"GO:0016269"}


id: GO:0060086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homeostatic process in which an organism modulates its internal body temperature at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian temperature homeostasis","synonyms":[{"name":"circadian regulation of body temperature","type":"related"},{"name":"circadian thermoregulation","type":"exact"}],"termid":"GO:0060086"}


id: GO:0000235
data:
  {"annotated_genes":["SJAG_04387","SJAG_00655","SJAG_01613","SJAG_02695","SJAG_02509","SJAG_04003","SJAG_01297","SJAG_02286","SJAG_02045","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101155,105963,109180,109393,114119],"is_not":false,"summary":null,"term":"GO:0000235"},{"annotations":[89697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[80715,93325,63243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[98920],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"}]},"cv_name":"cellular_component","definition":"Any of the spindle microtubules that radiate in all directions from the spindle poles and are thought to contribute to the forces that separate the poles and position them in relation to the rest of the cell.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle microtubule","termid":"GO:0005876"},{"relation_name":"is_a","term_name":"cytoplasmic microtubule","termid":"GO:0005881"},{"relation_name":"part_of","term_name":"aster","termid":"GO:0005818"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"astral microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000235","terms_by_termid":{"GO:0000235":null,"GO:0061673":null,"GO:1905721":null,"GO:1990574":null}}


id: PBO:0012523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_morphogenesis_of","termid":"PBO:0012523"}


id: GO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-11 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-11 receptor binding","synonyms":[{"name":"IL-11","type":"narrow"},{"name":"interleukin-11 receptor ligand","type":"narrow"}],"termid":"GO:0005142"}


id: GO:0032701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["GOC:mah","PMID:23710316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-18 production","termid":"GO:0032661"},{"relation_name":"negatively_regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-18 production","secondary_identifiers":["GO:0045382","GO:0150121"],"synonyms":[{"name":"down regulation of interleukin-18 production","type":"exact"},{"name":"down-regulation of interleukin-18 production","type":"exact"},{"name":"downregulation of interleukin-18 production","type":"exact"},{"name":"inhibition of interleukin-18 production","type":"narrow"},{"name":"negative regulation of IL-18 production","type":"exact"},{"name":"negative regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032701"}


id: PBO:0056823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14A","termid":"PBO:0056823"}


id: GO:0061364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The apoptotic process that contributes to luteolysis.","definition_xrefs":["GOC:mtg_apoptosis","PMID:18566128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"luteolysis","termid":"GO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in luteolysis","synonyms":[{"name":"apoptosis involved in luteolysis","type":"narrow"},{"name":"structural luteolysis","type":"exact"}],"termid":"GO:0061364"}


id: MONDO:0009817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the OSTM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile osteopetrosis with neuroaxonal dysplasia","termid":"MONDO:0010866"},{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 5","secondary_identifiers":["DOID:0110939","MESH:C566883","OMIM:259720","UMLS:C1968603","GARD:4153","MEDGEN:409627"],"synonyms":[{"name":"OPTB5","type":"exact"},{"name":"OSTM1 osteopetrosis (disease)","type":"exact"},{"name":"autosomal recessive osteopetrosis 5","type":"exact"},{"name":"autosomal recessive osteopetrosis type 5","type":"exact"},{"name":"infantile malignant osteopetrosis 3","type":"exact"},{"name":"osteopetrosis (disease) caused by mutation in OSTM1","type":"exact"},{"name":"osteopetrosis autosomal recessive 5","type":"related"},{"name":"osteopetrosis infantile malignant 3","type":"related"},{"name":"osteopetrosis, autosomal recessive 5","type":"related"},{"name":"osteopetrosis, autosomal recessive type 5","type":"exact"},{"name":"osteopetrosis, infantile malignant 3","type":"related"}],"termid":"MONDO:0009817","xrefs":{"Monarch":{"xref_id":"0009817"}}}


id: PBO:0053291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain kinase 1","termid":"PBO:0053291"}


id: PBO:0039453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 1","termid":"PBO:0039453"}


id: PBO:0079003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 3-1","termid":"PBO:0079003"}


id: GO:0080160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of selenate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:18761637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"selenate transport","termid":"GO:0080160"}


id: PBO:0072714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide receptor 1","termid":"PBO:0072714"}


id: GO:0004725
data:
  {"annotated_genes":["SJAG_02000","SJAG_04166","SJAG_01667","SJAG_00214","SJAG_00082","SJAG_03263","SJAG_04332","SJAG_01161","SJAG_02013"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73872,74720,75367,107185,114350],"is_not":false,"summary":null,"term":"GO:0004725"},{"annotations":[96987,93617,72973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033550"},{"annotations":[64012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004726"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["EC:3.1.3.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00214":null,"SJAG_01161":null,"SJAG_01667":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_03263":null,"SJAG_04166":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0140096","GO:0016787","GO:0003824","GO:0003674","GO:0004721"],"is_obsolete":false,"name":"protein tyrosine phosphatase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-997314","Reactome:R-HSA-8852200","Reactome:R-HSA-997326","Reactome:R-HSA-1169192","Reactome:R-HSA-202214","Reactome:R-HSA-1169210","Reactome:R-HSA-9700200","Reactome:R-HSA-391868","Reactome:R-HSA-914036","Reactome:R-HSA-9635461","Reactome:R-HSA-877308","Reactome:R-HSA-8864036","Reactome:R-HSA-8867047","Reactome:R-HSA-6807008","Reactome:R-HSA-74747","Reactome:R-HSA-5683967","Reactome:R-HSA-8864029","Reactome:R-HSA-9865167","Reactome:R-HSA-9636439","MetaCyc:PROTEIN-TYROSINE-PHOSPHATASE-RXN","Reactome:R-HSA-9701507","Reactome:R-HSA-8849435","Reactome:R-HSA-8863804","Reactome:R-HSA-1549564","Reactome:R-HSA-203797","Reactome:R-HSA-74733","Reactome:R-HSA-997309","RHEA:10684","Reactome:R-HSA-74748","Reactome:R-HSA-8855381","Reactome:R-HSA-1169188","Reactome:R-HSA-377643","Reactome:R-HSA-9603719","Reactome:R-HSA-445089","Reactome:R-HSA-6807027","Reactome:R-HSA-8864125","Reactome:R-HSA-9674816","Reactome:R-HSA-8937767","Reactome:R-HSA-9698408","Reactome:R-HSA-389758","Reactome:R-HSA-8867658","Reactome:R-HSA-997311"],"synonyms":[{"name":"PPT-phosphatase activity","type":"related"},{"name":"PTP-phosphatase activity","type":"related"},{"name":"PTPase activity","type":"related"},{"name":"[phosphotyrosine]protein phosphatase activity","type":"related"},{"name":"phosphoprotein phosphatase (phosphotyrosine) activity","type":"related"},{"name":"phosphotyrosine histone phosphatase activity","type":"related"},{"name":"phosphotyrosine phosphatase activity","type":"related"},{"name":"phosphotyrosine protein phosphatase activity","type":"related"},{"name":"phosphotyrosylprotein phosphatase activity","type":"related"},{"name":"protein phosphotyrosine phosphatase activity","type":"related"},{"name":"protein-tyrosine-phosphatase activity","type":"related"},{"name":"protein-tyrosine-phosphate phosphohydrolase activity","type":"related"},{"name":"tyrosine O-phosphate phosphatase activity","type":"related"},{"name":"tyrosylprotein phosphatase activity","type":"related"}],"termid":"GO:0004725","terms_by_termid":{"GO:0004725":null,"GO:0004726":null,"GO:0033550":null}}


id: FYPO:0009036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of benzamidine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to benzamidine","synonyms":[{"name":"resistance to benzamidine during mitotic cell cycle","type":"related"},{"name":"resistance to benzamidine during vegetative growth","type":"exact"},{"name":"resistant to benzamidine","type":"exact"}],"termid":"FYPO:0009036"}


id: FYPO:0002797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein degradation","synonyms":[{"name":"decreased protein breakdown","type":"exact"},{"name":"decreased protein catabolic process","type":"exact"},{"name":"decreased protein catabolism","type":"exact"},{"name":"reduced protein degradation","type":"exact"}],"termid":"FYPO:0002797"}


id: GO:0009560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized embryo sac nucleus cellularizes and acquires the specialized features of an egg cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_plant","GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac egg cell differentiation","secondary_identifiers":["GO:0048233"],"synonyms":[{"name":"female gamete generation","type":"broad"},{"name":"female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0009560"}


id: SO:1000043
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non reciprocal translocation whereby the participating chromosomes break at their centromeres and the long arms fuse to form a single chromosome with a single centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Robertsonian_fusion","secondary_identifiers":["http://en.wikipedia.org/wiki/Robertsonian_fusion"],"synonyms":[{"name":"Robertsonian fusion","type":"exact"},{"name":"centric-fusion translocations","type":"exact"},{"name":"whole-arm translocations","type":"exact"}],"termid":"SO:1000043"}


id: MONDO:0035542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split cord malformation (obsolete MONDO:0035542)","secondary_identifiers":["Orphanet:573278"],"termid":"MONDO:0035542","xrefs":{"Monarch":{"xref_id":"0035542"}}}


id: GO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant) and the tumor suppressor protein adenomatous polyposis coli (APC); may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Scrib-APC complex","synonyms":[{"name":"hScrib-APC complex","type":"narrow"}],"termid":"GO:0034749"}


id: GO:1990024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Synaptic bouton found in spinal cord on the soma and proximal dendrites of motor neurons.","definition_xrefs":["NIF_Subcellular:nlx_subcell_100208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"C bouton","termid":"GO:1990024"}


id: PATO:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of inhering in a bearer by virtue of the bearer's disposition to move freely.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobility","termid":"PATO:0000004"}


id: GO:0052523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont programmed cell death (obsolete GO:0052523)","synonyms":[{"name":"enhancement or induction of symbiont programmed cell death","type":"exact"},{"name":"positive regulation by organism of symbiont programmed cell death","type":"exact"}],"termid":"GO:0052523"}


id: GO:0019872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of streptomycin, a commonly used antibiotic in cell culture media; it acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"streptomycin metabolic process","termid":"GO:0046343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"streptomycin biosynthetic process","synonyms":[{"name":"streptomycin anabolism","type":"exact"},{"name":"streptomycin biosynthesis","type":"exact"},{"name":"streptomycin formation","type":"exact"},{"name":"streptomycin synthesis","type":"exact"}],"termid":"GO:0019872"}


id: PBO:0005777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp18 (predicted)","termid":"PBO:0005777"}


id: GO:0102298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-selenocysteine + O-phosphonato-L-homoserine = hydrogenphosphate + L-selenocystathionine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete selenocystathione synthase activity (obsolete GO:0102298)","termid":"GO:0102298"}


id: GO:0050529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + polyneuridine aldehyde = 16-epivellosimine + CO2 + methanol.","definition_xrefs":["EC:3.1.1.78","RHEA:17501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"polyneuridine-aldehyde esterase activity","secondary_identifiers":["KEGG_REACTION:R05825","MetaCyc:3.1.1.78-RXN"],"synonyms":[{"name":"PNAE activity","type":"related"},{"name":"polyneuridine aldehyde esterase activity","type":"related"},{"name":"polyneuridine aldehyde hydrolase (decarboxylating)","type":"related"}],"termid":"GO:0050529"}


id: PR:Q09737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc202 gene.","definition_xrefs":["UniProtKB:Q09737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase C13A11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.06","synonyms":[{"name":"Spom972h-pdc202","type":"exact"}],"termid":"PR:Q09737"}


id: FYPO:0000069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of thiabendazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to thiabendazole","synonyms":[{"name":"resistance to TBZ","type":"exact"},{"name":"resistance to thiabendazole during mitotic cell cycle","type":"related"},{"name":"resistance to thiabendazole during vegetative growth","type":"exact"},{"name":"resistant to TBZ","type":"exact"},{"name":"resistant to thiabendazole","type":"exact"}],"termid":"FYPO:0000069"}


id: MONDO:0002459
data:
  {"annotated_genes":["SJAG_01787","SJAG_03453","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[87732,87733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of type IV hypersensitivity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type IV hypersensitivity disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3115","UMLS:C0020522","MEDGEN:9371","DOID:2916"],"synonyms":[{"name":"DTH","type":"exact"},{"name":"delayed hypersensitivity reaction","type":"exact"},{"name":"delayed-type hypersensitivity","type":"exact"},{"name":"delayed-type hypersensitivity response","type":"exact"},{"name":"disorder of type IV hypersensitivity","type":"exact"},{"name":"hypersensitivity reaction type IV disease","type":"related"},{"name":"immunoproliferative disease","type":"related"},{"name":"type 4 hypersensitivity reaction","type":"exact"},{"name":"type IV hypersensitivity","type":"exact"},{"name":"type IV hypersensitivity reaction","type":"exact"}],"termid":"MONDO:0002459","terms_by_termid":{"MONDO:0013767":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0002459"}}}


id: GO:0140932
data:
  {"annotated_genes":["SJAG_01625","SJAG_05010"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70558,93504],"is_not":false,"summary":null,"term":"GO:0140932"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-end (N2,N2,N7-trimethyl 5'-triphosphoguanosine)-ribonucleoside in mRNA + H2O = a 5'-end diphospho-ribonucleoside in mRNA + 2 H+ + N7-methyl-GMP. Can also use (N7-methyl 5'-triphosphoguanosine)-ribonucleoside in mRNA as a substrate.","definition_xrefs":["PMID:24742626","PMID:32723815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01625":null,"SJAG_05010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["EC:3.6.1.59"],"synonyms":[{"name":"m(7)GpppN m(7)GMP phosphohydrolase activity","type":"exact"},{"name":"m(7)GpppX diphosphatase activity","type":"exact"},{"name":"m(7)GpppX pyrophosphatase activity","type":"exact"}],"termid":"GO:0140932","terms_by_termid":{"GO:0140932":null}}


id: GO:0042142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The strong but reversible binding of a heavy metal ion by a larger molecule such as protein.","definition_xrefs":["ISBN:0124325653","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal chelation (obsolete GO:0042142)","synonyms":[{"name":"heavy metal chelation","type":"exact"}],"termid":"GO:0042142"}


id: GO:0045273
data:
  {"annotated_genes":["SJAG_01671","SJAG_02398","SJAG_03920","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76514,77897,78697,90760],"is_not":false,"summary":null,"term":"GO:0045273"}]},"cv_name":"cellular_component","definition":"A part of the respiratory chain, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"respiratory chain complex II (succinate dehydrogenase)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"electron transport complex II","type":"related"}],"termid":"GO:0045273","terms_by_termid":{"GO:0045273":null}}


id: PBO:0027065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_transport_phenotype","termid":"PBO:0027065"}


id: GO:0097537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Y-shaped protein complex in the ciliary transition zone that connects the cilium axoneme to the ciliary necklace. Both protein sorting and protein gating occur at this point in the cilium allowing some, but not all proteins to enter the cilium.","definition_xrefs":["GOC:cilia","PMID:22653444","PMID:4554367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Y-shaped link","synonyms":[{"name":"Y-link","type":"related"},{"name":"Y-link structure","type":"related"},{"name":"Y-shaped assemblage","type":"related"},{"name":"Y-shaped fiber","type":"related"},{"name":"Y-shaped fibre","type":"related"},{"name":"Y-shaped linker","type":"related"},{"name":"membrane-microtubule complex","type":"related"}],"termid":"GO:0097537"}


id: GO:0034102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective elimination of erythrocytes from the body by autoregulatory mechanisms.","definition_xrefs":["GOC:add","PMID:14754397","PMID:12905029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"erythrocyte homeostasis","termid":"GO:0034101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte clearance","synonyms":[{"name":"RBC clearance","type":"exact"},{"name":"neocytolysis","type":"narrow"},{"name":"red blood cell clearance","type":"exact"}],"termid":"GO:0034102"}


id: GO:0003937
data:
  {"annotated_genes":["SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71811],"is_not":false,"summary":null,"term":"GO:0003937"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide.","definition_xrefs":["EC:3.5.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"IMP cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:IMPCYCLOHYDROLASE-RXN","Reactome:R-HSA-73797","RHEA:18445"],"synonyms":[{"name":"IMP 1,2-hydrolase (decyclizing)","type":"related"},{"name":"IMP synthetase activity","type":"related"},{"name":"inosinate cyclohydrolase activity","type":"related"},{"name":"inosinicase activity","type":"related"}],"termid":"GO:0003937","terms_by_termid":{"GO:0003937":null}}


id: PBO:0059800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 26","termid":"PBO:0059800"}


id: PR:O74749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hse1 gene.","definition_xrefs":["UniProtKB:O74749","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class E vacuolar protein-sorting machinery protein hse1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.08","synonyms":[{"name":"Spom972h-hse1","type":"exact"}],"termid":"PR:O74749"}


id: PATO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer having an elongate structure, similar to a ridge, that extends longitudinally along an anatomical entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keel-shaped","termid":"PATO:0002522"}


id: GO:0140586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Bridging together a cis-regulatory element and a terminator DNA sequences on the chromatin, holding two loop anchors together, maintaining a chromatin loop.","definition_xrefs":["PMID:19933151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin loop anchoring activity","termid":"GO:0140587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"promoter-terminator loop anchoring activity","synonyms":[{"name":"terminator-promoter loop anchoring activity","type":"exact"}],"termid":"GO:0140586"}


id: PBO:0068386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF186 antisense RNA 1","termid":"PBO:0068386"}


id: PBO:0053138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A","termid":"PBO:0053138"}


id: PBO:0069663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 940, pseudogene","termid":"PBO:0069663"}


id: MONDO:0020845
data:
  {"annotated_genes":["SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88337],"is_not":false,"summary":null,"term":"MONDO:0020845"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0004069","MONDO:0002320"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648331","DOID:0111524","UMLS:C4748184","OMIM:618098"],"synonyms":[{"name":"PEOB5","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 5","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 5","type":"exact"}],"termid":"MONDO:0020845","terms_by_termid":{"MONDO:0020845":null},"xrefs":{"Monarch":{"xref_id":"0020845"}}}


id: GO:0140499
data:
  {"annotated_genes":["SJAG_02336","SJAG_03353","SJAG_01679","SJAG_03681","SJAG_00883","SJAG_02169","SJAG_01297","SJAG_04259","SJAG_02451","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96146],"is_not":false,"summary":null,"term":"GO:0140499"},{"annotations":[109202,92668,113954,110230,117899,116267,105846,101540,115780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of negative regulation of mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PMID:28017606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"positive regulation of mitotic metaphase/anaphase transition","termid":"GO:0045842"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid segregation","termid":"GO:0062033"},{"relation_name":"is_a","term_name":"negative regulation of spindle checkpoint","termid":"GO:0090233"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090266"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle assembly checkpoint signaling","termid":"GO:0007094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0023052","GO:0044772","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140499","terms_by_termid":{"GO:0140499":null,"GO:1902426":null}}


id: GO:1902682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in the pericentric heterochromatin.","definition_xrefs":["PMID:20211136","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, centromeric region","termid":"GO:0071459"},{"relation_name":"is_a","term_name":"protein localization to heterochromatin","termid":"GO:0097355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to pericentric heterochromatin","synonyms":[{"name":"protein localisation in centromeric heterochromatin","type":"exact"}],"termid":"GO:1902682"}


id: PR:Q04800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH oxidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02342","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric reductase transmembrane component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.09c","secondary_identifiers":["UniProtKB:Q04800"],"synonyms":[{"name":"Spom972h-NOX1","type":"exact"},{"name":"ferric-chelate reductase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q04800"}


id: GO:1903280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of calcium:sodium antiporter activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:19683723","GO_REF:0000059","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium:sodium antiporter activity (obsolete GO:1903280)","synonyms":[{"name":"down regulation of calcium:sodium antiporter activity","type":"exact"},{"name":"down regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"down regulation of sodium/calcium exchanger","type":"exact"},{"name":"down regulation of sodium:calcium exchange","type":"related"},{"name":"down-regulation of calcium:sodium antiporter activity","type":"exact"},{"name":"down-regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"down-regulation of sodium/calcium exchanger","type":"exact"},{"name":"down-regulation of sodium:calcium exchange","type":"related"},{"name":"downregulation of calcium:sodium antiporter activity","type":"exact"},{"name":"downregulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"downregulation of sodium/calcium exchanger","type":"exact"},{"name":"downregulation of sodium:calcium exchange","type":"related"},{"name":"inhibition of calcium:sodium antiporter activity","type":"narrow"},{"name":"inhibition of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"inhibition of sodium/calcium exchanger","type":"narrow"},{"name":"inhibition of sodium:calcium exchange","type":"related"},{"name":"negative regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"negative regulation of sodium/calcium exchanger","type":"exact"},{"name":"negative regulation of sodium:calcium exchange","type":"related"}],"termid":"GO:1903280"}


id: GO:0102210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a rhamnogalacturonan type I = [rhamnogalacturonan I oligosaccharide]-alpha-L-rhamnose + 4-deoxy-4,5-unsaturated D-galactopyranosyluronate-[rhamnogalacturonan I oligosaccharide].","definition_xrefs":["GOC:pz","EC:4.2.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rhamnogalacturonan endolyase activity","secondary_identifiers":["MetaCyc:RXN-12173"],"termid":"GO:0102210"}


id: MONDO:0013107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 11q13.5.","definition_xrefs":["PMID:19349984","DOID:0110103","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 7","secondary_identifiers":["MEDGEN:414058","MESH:C567796","OMIM:613064","UMLS:C2751599"],"synonyms":[{"name":"ATOD7","type":"exact"},{"name":"atopic dermatitis 7","type":"exact"},{"name":"atopic dermatitis type 7","type":"exact"},{"name":"dermatitis, ATOPIC, 7","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 7","type":"exact"}],"termid":"MONDO:0013107","xrefs":{"Monarch":{"xref_id":"0013107"}}}


id: PBO:0044366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 56","termid":"PBO:0044366"}


id: MONDO:0015457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum agenesis-double urinary collecting system syndrome","secondary_identifiers":["UMLS:C2930897","Orphanet:1492","MEDGEN:419659","MESH:C535427"],"synonyms":[{"name":"Ben Ari Shuper Mimouni syndrome","type":"related"},{"name":"Ben Ari-Shuper-Mimouni syndrome","type":"exact"},{"name":"agenesis of corpus callosum with double urinary collecting system, trigonocephaly and minor anomalies","type":"related"},{"name":"corpus callosum agenesis - double urinary collecting system","type":"related"},{"name":"corpus callosum agenesis double urinary collecting","type":"related"},{"name":"corpus callosum agenesis-double urinary collecting system syndrome","type":"exact"}],"termid":"MONDO:0015457","xrefs":{"Monarch":{"xref_id":"0015457"}}}


id: FYPO:0006776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of phosphatidylinositol-4-phosphate binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatidylinositol binding","termid":"FYPO:0008328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased phosphatidylinositol-4-phosphate binding","synonyms":[{"name":"decreased PtdIns-4-P binding","type":"exact"},{"name":"decreased phosphatidylinositol 4-phosphate binding","type":"exact"},{"name":"reduced phosphatidylinositol-4-phosphate binding","type":"exact"}],"termid":"FYPO:0006776"}


id: GO:1904863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904863"}


id: PATO:0001192
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A response quality inhering in a bearer by virtue of the bearer's excessive reaction to a stimulus or an agent.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"responsive to","termid":"PATO:0000487"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperresponsive to","synonyms":[{"name":"hyperresponsive","type":"exact"},{"name":"increased responsivity","type":"exact"}],"termid":"PATO:0001192"}


id: GO:0019631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quinate, the anion of quinic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"quinate catabolic process","secondary_identifiers":["MetaCyc:QUINATEDEG-PWY"],"synonyms":[{"name":"quinate breakdown","type":"exact"},{"name":"quinate catabolism","type":"exact"},{"name":"quinate degradation","type":"exact"},{"name":"quinic acid catabolic process","type":"exact"},{"name":"quinic acid catabolism","type":"exact"}],"termid":"GO:0019631"}


id: GO:0000715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The identification of lesions in DNA, such as pyrimidine-dimers, intrastrand cross-links, and bulky adducts. The wide range of substrate specificity suggests the repair complex recognizes distortions in the DNA helix.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA damage recognition","secondary_identifiers":["Reactome:R-HSA-5696394"],"synonyms":[{"name":"pyrimidine-dimer repair, DNA damage recognition","type":"related"}],"termid":"GO:0000715"}


id: PBO:0060971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYB pseudogene 1","termid":"PBO:0060971"}


id: PBO:0029870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation","termid":"PBO:0029870"}


id: GO:0031433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to telethonin, a protein found in the Z disc of striated muscle and which is a substrate of the titin kinase.","definition_xrefs":["PMID:10481174","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"telethonin binding","termid":"GO:0031433"}


id: GO:0008438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: diphosphate + a purine nucleoside = phosphate + a purine mononucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-5-phosphate kinase (obsolete GO:0008438)","synonyms":[{"name":"1-phosphatidylinositol-5-phosphate kinase","type":"exact"}],"termid":"GO:0008438"}


id: PBO:0072855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1B","termid":"PBO:0072855"}


id: PBO:0070063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 20, pseudogene","termid":"PBO:0070063"}


id: PBO:0014281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein Hmo1","termid":"PBO:0014281"}


id: PBO:0004293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad23 homolog Rhp23","termid":"PBO:0004293"}


id: PBO:0116726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD3 antisense RNA 1","termid":"PBO:0116726"}


id: GO:0008630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the detection of DNA damage, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:0008630"}


id: PBO:0066711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 8","termid":"PBO:0066711"}


id: SO:0000273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a valine anticodon, and a 3' valine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"valine_tRNA_primary_transcript","termid":"SO:0000230"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valyl_tRNA","synonyms":[{"name":"valyl tRNA","type":"exact"},{"name":"valyl-transfer RNA","type":"related"},{"name":"valyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000273"}


id: FYPO:0002999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to medial cortex during vegetative growth","termid":"FYPO:0002558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to medial cortical node","synonyms":[{"name":"normal protein localisation to medial cortical node","type":"exact"},{"name":"normal protein localization to cortical medial dot","type":"exact"},{"name":"normal protein localization to cytokinetic nodes","type":"related"},{"name":"normal protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"normal protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortical nodes","type":"exact"},{"name":"normal protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0002999"}


id: MONDO:0002787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A craniopharyngioma consisting of broad strands, cords and bridges of a multistratified squamous epithelium with peripheral palisading of nuclei. Diagnostic features include nodules of compact 'wet' keratin and dystrophic calcification. (Adapted from WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniopharyngioma","termid":"MONDO:0018907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adamantinous craniopharyngioma","secondary_identifiers":["DOID:3846","ICDO:9351/1","NCIT:C4726","MEDGEN:98126","UMLS:C0431129"],"synonyms":[{"name":"adamantinomatous craniopharyngioma","type":"exact"},{"name":"adamantinous Rathke's pouch neoplasm","type":"exact"},{"name":"adamantinous Rathke's pouch tumor","type":"exact"},{"name":"adamantinous Rathke's pouch tumour","type":"exact"},{"name":"adamantinous craniopharyngioma (morphologic abnormality)","type":"exact"},{"name":"adamantinous neoplasm of Rathke's pouch","type":"exact"},{"name":"adamantinous tumor of Rathke's pouch","type":"exact"},{"name":"adamantinous tumour of Rathke's pouch","type":"exact"},{"name":"craniopharyngioma, adamantinomatous","type":"exact"}],"termid":"MONDO:0002787","xrefs":{"Monarch":{"xref_id":"0002787"}}}


id: MONDO:0020664
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm characterized by the presence of neoplastic spindle cells.","definition_xrefs":["NCIT:C27263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"spindle cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0000705","UMLS:C1336052","MEDGEN:234806"],"synonyms":[{"name":"spindle cell neoplasm","type":"exact"},{"name":"spindle cell tumor","type":"exact"},{"name":"spindle cell tumour","type":"exact"}],"termid":"MONDO:0020664","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0020664"}}}


id: GO:0018042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-histidine amide by hydrolysis and oxidation of an interior His-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0089"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-histidine amidation (obsolete GO:0018042)","termid":"GO:0018042"}


id: PBO:0054981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2395","termid":"PBO:0054981"}


id: GO:0099605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the frequency of action potentials in a spike train.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential firing rate","termid":"GO:0099605"}


id: MONDO:0013598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myostatin-related muscle hypertrophy is a rare condition characterized by reduced body fat and increased muscle size. Affected individuals have up to twice the usual amount of muscle mass in their bodies. They also tend to have increased muscle strength. This condition is not known to cause any medical problems, and affected individuals are intellectually normal. Myostatin-related muscle hypertrophy is caused by mutations in the MSTN gene. It follows an incomplete autosomal dominant pattern of inheritance.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myostatin-related muscle hypertrophy","secondary_identifiers":["Orphanet:275534","DOID:0111072","MESH:C536106","UMLS:C2931112","HGNC:4223","SCTID:699185005","OMIM:614160","ICD9:756.89","MEDGEN:418994"],"synonyms":[{"name":"MSLHP","type":"exact"},{"name":"muscle hypertrophy","type":"related"}],"termid":"MONDO:0013598","xrefs":{"Monarch":{"xref_id":"0013598"}}}


id: MONDO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a Indian prawn.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete Indian prawn allergy (obsolete MONDO:0000802)","secondary_identifiers":["DOID:0060527"],"synonyms":[{"name":"Fenneropenaeus indicus allergy","type":"exact"},{"name":"Indian prawn allergic disease","type":"exact"},{"name":"allergy of Indian prawn","type":"exact"}],"termid":"MONDO:0000802","xrefs":{"Monarch":{"xref_id":"0000802"}}}


id: MONDO:0000493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Muckle-Wells syndrome (obsolete MONDO:0000493)","termid":"MONDO:0000493","xrefs":{"Monarch":{"xref_id":"0000493"}}}


id: GO:0017106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to negatively regulate the activity of activin, a nonsteroidal regulator synthesized in the pituitary gland and gonads that stimulates the secretion of follicle-stimulating hormone.","definition_xrefs":["ISBN:0198506732","ISBN:0721662544"],"gene_count":0,"genotype_count":0,"name":"obsolete activin inhibitor activity (obsolete GO:0017106)","synonyms":[{"name":"activin inhibitor activity","type":"exact"}],"termid":"GO:0017106"}


id: GO:0090123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The polysaccharide-based coating on the inner side of a lysosomal membrane. It may be involved in protecting the membrane from digestion by lysosomal enzymes.","definition_xrefs":["GOC:krc","PMID:10521503","GOC:ascb_2009","GOC:dph","PMID:29367433","GOC:tb","PMID:22809326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"lysosomal glycocalyx","termid":"GO:0090123"}


id: SO:0000960
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, circular DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"single_stranded_DNA_chromosome","termid":"SO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_single_stranded_DNA_chromosome","synonyms":[{"name":"circular single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000960"}


id: PBO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sodium_export","termid":"PBO:0030484"}


id: MONDO:0017633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare intoxication due to medical products (obsolete MONDO:0017633)","secondary_identifiers":["Orphanet:306640"],"termid":"MONDO:0017633","xrefs":{"Monarch":{"xref_id":"0017633"}}}


id: FYPO:0004769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular asparagine level","termid":"FYPO:0006953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar asparagine level","synonyms":[{"name":"increased level of asparagine in vacuole","type":"exact"},{"name":"increased vacuolar L-asparagine level","type":"exact"},{"name":"increased vacuolar asparagine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004769"}


id: PBO:0059816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 42","termid":"PBO:0059816"}


id: GO:0072204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the metanephros over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in kidney development","termid":"GO:0060995"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in metanephros development","synonyms":[{"name":"cell-cell signalling involved in metanephros development","type":"exact"}],"termid":"GO:0072204"}


id: GO:1990839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an endothelin stimulus. Endothelin is any of three secretory vasoconstrictive peptides (endothelin-1, -2, -3).","definition_xrefs":["PMID:16365184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to endothelin","termid":"GO:1990839"}


id: PBO:0084423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major isozyme of methylenetetrahydrofolate reductase; catalyzes the reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate in the methionine biosynthesis pathway","termid":"PBO:0084423"}


id: GO:1990806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by activation of a ligand-gated ion channel on the surface of a cell. The pathway begins with binding of an extracellular ligand to a ligand-gated ion channel and ends with a molecular function that directly regulates a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bhm","PMID:25869137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ligand-gated ion channel signaling pathway","synonyms":[{"name":"ligand-gated ion channel signalling pathway","type":"exact"}],"termid":"GO:1990806"}


id: PBO:0051474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-64 (pseudogene)","termid":"PBO:0051474"}


id: PBO:0087489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; involved in 3' end formation of mRNA via cleavage and polyadenylation of pre-mRNA; binds pre-mRNA via the zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of the endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; possible role in ubiquitination of Pap1p; relocalizes to the cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0087489"}


id: PBO:0004402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-diacylglycerol acyltransferase Plh1","termid":"PBO:0004402"}


id: MONDO:0012380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 14q11.2-q12.","definition_xrefs":["PMID:15958501","DOID:0110579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 53","secondary_identifiers":["MEDGEN:355336","UMLS:C1864957","OMIM:609965","GARD:9934","MESH:C566495"],"synonyms":[{"name":"DFNA53","type":"narrow"},{"name":"autosomal dominant deafness 53","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 53","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 53","type":"narrow"},{"name":"deafness, autosomal dominant 53","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 53","type":"narrow"}],"termid":"MONDO:0012380","xrefs":{"Monarch":{"xref_id":"0012380"}}}


id: PBO:0062138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 5","termid":"PBO:0062138"}


id: PBO:0088844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease activator Ctp1","termid":"PBO:0088844"}


id: PR:O74329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02488","PRO:DNx","PANTHER:PTHR12010:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.09","secondary_identifiers":["UniProtKB:O74329"],"synonyms":[{"name":"Spom972h-RPS29","type":"exact"}],"termid":"PR:O74329"}


id: PBO:0056708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of cell motility 1","termid":"PBO:0056708"}


id: GO:0021568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 2 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:curators","GOC:dph","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 development","termid":"GO:0021568"}


id: MONDO:0018590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABeta2M amyloidosis","secondary_identifiers":["GARD:21829","DOID:0080928","MEDGEN:1842860","icd11.foundation:448754119","UMLS:C5680053","Orphanet:439246"],"synonyms":[{"name":"Beta2-microglobulinic amyloidosis","type":"exact"}],"termid":"MONDO:0018590","xrefs":{"Monarch":{"xref_id":"0018590"}}}


id: PBO:0070588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 54","termid":"PBO:0070588"}


id: GO:0032158
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A diffuse ring composed of a series of septin bars that run parallel to the long axis of the cell. This type of septin structure has been observed in a number of locations associated with polarized grown and/or deposition of new membrane, but not with cytokinesis, such as at the shmoo (mating projection) neck, at the junction between the mother cell and the germ tube (hypha) of a fungal cell growing filamentously.","definition_xrefs":["GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"septin cytoskeleton","termid":"GO:0032156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin band","termid":"GO:0032158"}


id: MOD:00775
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"An artifactual protein modification that converts an L-histidine residue to L-asparagine by oxidative degradation.","definition_xrefs":["PubMed:9252331","Unimod:348","OMSSA:54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine residue","termid":"MOD:00012"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine (His)","synonyms":[{"name":"His->Asn","type":"related"},{"name":"his2asnh","type":"exact"},{"name":"histidine oxidation to aspargine","type":"related"}],"termid":"MOD:00775"}


id: FYPO:0004123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal glutathione disulfide oxidoreductase activity","termid":"FYPO:0004123"}


id: GO:0060413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which atrial septum is generated and organized. The atrial septum separates the upper chambers (the atria) of the heart from one another.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"},{"relation_name":"part_of","term_name":"atrial septum development","termid":"GO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum morphogenesis","secondary_identifiers":["GO:0003287"],"synonyms":[{"name":"interatrial septum morphogenesis","type":"exact"}],"termid":"GO:0060413"}


id: PBO:0065575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hormone","termid":"PBO:0065575"}


id: GO:0070115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers that surround an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"organellar chromatophore","termid":"GO:0070111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"organellar chromatophore intermembrane space","synonyms":[{"name":"Paulinella-type chromatophore intermembrane space","type":"exact"}],"termid":"GO:0070115"}


id: MONDO:0029134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disease","termid":"MONDO:0000001"},{"relation_name":"excluded_subClassOf","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"severe combined immunodeficiency due to CARMIL2 deficiency","secondary_identifiers":["OMIM:618131","Orphanet:542301","MEDGEN:1648422","DOID:0111984","GARD:17981","UMLS:C4748304"],"synonyms":[{"name":"IMD58","type":"related"},{"name":"immunodeficiency 58","type":"exact"}],"termid":"MONDO:0029134","xrefs":{"Monarch":{"xref_id":"0029134"}}}


id: GO:0050380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H+ + phosphate.","definition_xrefs":["PMID:18411271","RHEA:28094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyl diphosphate phosphatase activity","termid":"GO:0120556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"undecaprenyl-diphosphatase activity","secondary_identifiers":["EC:3.6.1.27","KEGG_REACTION:R05627","MetaCyc:UNDECAPRENYL-DIPHOSPHATASE-RXN"],"synonyms":[{"name":"C(55)-isoprenyl diphosphatase activity","type":"related"},{"name":"C(55)-isoprenyl pyrophosphatase activity","type":"related"},{"name":"C55-isoprenyl diphosphatase activity","type":"related"},{"name":"C55-isoprenyl pyrophosphatase activity","type":"related"},{"name":"isoprenyl pyrophosphatase activity","type":"related"},{"name":"undecaprenyl-diphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050380"}


id: MONDO:0019242
data:
  {"annotated_genes":["SJAG_03290","SJAG_03069","SJAG_00944","SJAG_04149","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[88198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[87436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100058"},{"annotations":[87038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[87127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of branched-chain amino acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00944":null,"SJAG_02433":null,"SJAG_03069":null,"SJAG_03290":null,"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of branched-chain amino acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:116020001","Orphanet:79197","UMLS:C0342712","GARD:18971","icd11.foundation:5456505","MEDGEN:87452"],"synonyms":[{"name":"branched chain amino acid metabolism disorder","type":"related"},{"name":"disorder of branched chain amino acid metabolism","type":"related"},{"name":"disorder of branched-chain amino acid metabolism","type":"exact"},{"name":"inborn branched-chain amino acid metabolic process disorder","type":"exact"},{"name":"inborn disorder of branched-chain amino acid metabolism","type":"exact"},{"name":"inborn error of branched-chain amino acid metabolic process","type":"exact"},{"name":"rare inborn error of branched-chain amino acid metabolic process","type":"exact"}],"termid":"MONDO:0019242","terms_by_termid":{"MONDO:0009529":null,"MONDO:0009603":null,"MONDO:0009666":null,"MONDO:0014057":null,"MONDO:0100058":null},"xrefs":{"Monarch":{"xref_id":"0019242"}}}


id: PBO:0053435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 380","termid":"PBO:0053435"}


id: GO:0060682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the primary ureteric bud grows along its axis dorsally toward the metanephric blastema.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ureteric bud growth","termid":"GO:0060682"}


id: GO:0018481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: <stereo>cis,trans</stereo>-4-hydroxymuconate semialdehyde + H2O + NAD+ = 2 H+ + maleylacetate + NADH.","definition_xrefs":["EC:1.2.1.61","RHEA:22420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxymuconic-semialdehyde dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0229","MetaCyc:1.2.1.61-RXN","KEGG_REACTION:R05236"],"synonyms":[{"name":"4-hydroxymuconic-semialdehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018481"}


id: FYPO:0007856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the duration of localization of a protein to the spindle is longer than normal during the first meiotic nuclear division.","definition_xrefs":["PMID:12606573","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein localization to spindle during meiosis I","synonyms":[{"name":"decreased protein phosphorylation during mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"decreased protein phosphorylation during mitotic spindle assembly checkpoint signalling","type":"exact"},{"name":"decreased protein phosphorylation during mitotic spindle checkpoint","type":"related"},{"name":"decreased protein phosphorylation during signal transduction involved in mitotic spindle assembly checkpoint","type":"exact"},{"name":"decreased protein phosphorylation during spindle assembly checkpoint signaling during mitotic cell cycle","type":"exact"},{"name":"reduced protein phosphorylation during mitotic spindle assembly checkpoint signaling","type":"exact"}],"termid":"FYPO:0007856"}


id: MONDO:1011865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axonopathy, non-human animal","secondary_identifiers":["OMIA:001106"],"termid":"MONDO:1011865","xrefs":{"Monarch":{"xref_id":"1011865"}}}


id: PBO:0071442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 48","termid":"PBO:0071442"}


id: MONDO:0100079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SCN1A gene.","definition_xrefs":["OMIM:607208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 6A","synonyms":[{"name":"DEE6A","type":"exact"},{"name":"Dravet syndrome","type":"related"},{"name":"EIEE6","type":"exact"},{"name":"developmental and epileptic encephalopathy, 6A","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 6","type":"exact"}],"termid":"MONDO:0100079","xrefs":{"Monarch":{"xref_id":"0100079"}}}


id: MONDO:0044919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the renal pelvis.","definition_xrefs":["NCIT:C7525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"renal pelvis neoplasm","termid":"MONDO:0003719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"malignant renal pelvis neoplasm","secondary_identifiers":["UMLS:C0153618","MEDGEN:57793"],"synonyms":[{"name":"cancer of renal pelvis","type":"exact"},{"name":"malignant neoplasm of renal pelvis","type":"exact"},{"name":"malignant neoplasm of the renal pelvis","type":"exact"},{"name":"malignant renal pelvis neoplasm","type":"exact"},{"name":"malignant renal pelvis tumor","type":"exact"},{"name":"malignant renal pelvis tumour","type":"exact"},{"name":"malignant tumor of renal pelvis","type":"exact"},{"name":"malignant tumor of the renal pelvis","type":"exact"},{"name":"malignant tumour of renal pelvis","type":"exact"},{"name":"malignant tumour of the renal pelvis","type":"exact"},{"name":"renal pelvis cancer","type":"exact"}],"termid":"MONDO:0044919","xrefs":{"Monarch":{"xref_id":"0044919"}}}


id: PBO:0060747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B2","termid":"PBO:0060747"}


id: GO:1900192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"positively_regulates","term_name":"single-species biofilm formation","termid":"GO:0044010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-species biofilm formation","synonyms":[{"name":"activation of single-species biofilm formation","type":"narrow"},{"name":"up regulation of single-species biofilm formation","type":"exact"},{"name":"up-regulation of single-species biofilm formation","type":"exact"},{"name":"upregulation of single-species biofilm formation","type":"exact"}],"termid":"GO:1900192"}


id: PBO:0029427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029427"}


id: PBO:0034050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_structural_homology_relationship_with","termid":"PBO:0034050"}


id: PBO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CLN3","termid":"PBO:0001311"}


id: GO:0019886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.","definition_xrefs":["PMID:15771591","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class II","secondary_identifiers":["GO:0048005","GO:0042591","Reactome:R-HSA-2132295"],"synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class II","type":"broad"},{"name":"antigen presentation, exogenous peptide antigen","type":"broad"},{"name":"antigen processing, exogenous antigen via major histocompatibility complex class II","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0019886"}


id: MONDO:0015503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nose and cavum anomaly (obsolete MONDO:0015503)","secondary_identifiers":["Orphanet:156246","icd11.foundation:484839707"],"termid":"MONDO:0015503","xrefs":{"Monarch":{"xref_id":"0015503"}}}


id: PBO:0028022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_polymerase_activity","termid":"PBO:0028022"}


id: PBO:0063449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 8A","termid":"PBO:0063449"}


id: MONDO:0000999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pneumoconiosis (obsolete MONDO:0000999)","termid":"MONDO:0000999","xrefs":{"Monarch":{"xref_id":"0000999"}}}


id: PBO:0039609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR cell adhesion molecule 2","termid":"PBO:0039609"}


id: PBO:0091604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Gem6","termid":"PBO:0091604"}


id: MONDO:0008157
data:
  {"annotated_genes":["SJAG_03449"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87260],"is_not":false,"summary":null,"term":"MONDO:0008157"}]},"cv_name":"mondo","definition":"Buschke-Ollendorff syndrome (BOS) is a benign disorder characterized by the association of osteopoikilosis lesions (``spotted bones'') in the skeleton and connective tissue nevi in the skin.","definition_xrefs":["Orphanet:1306"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteopetrosis","termid":"MONDO:0017198"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dermis elastic tissue disorder (obsolete MONDO:0019292)","termid":"MONDO:0019292"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":0,"is_obsolete":false,"name":"Buschke-Ollendorff syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:166700","icd11.foundation:1556522143","MEDGEN:120545","GARD:1044","UMLS:C0265514","MESH:C537415","DOID:0111536"],"synonyms":[{"name":"Bos","type":"related"},{"name":"Buschke Ollendorff syndrome","type":"related"},{"name":"Buschke-Ollendorff syndrome","type":"exact"},{"name":"Dermatoosteopoikilosis","type":"related"},{"name":"dermatofibrosis lenticularis disseminata with osteopoikilosis","type":"related"},{"name":"dermatofibrosis lenticularis disseminata, isolated","type":"related"},{"name":"dermatofibrosis, disseminated with osteopoikilosis","type":"related"},{"name":"dermatofibrosis, disseminated, with osteopoikilosis","type":"related"},{"name":"disseminated dermatofibrosis with osteopoikilosis","type":"exact"},{"name":"osteopathia condensans disseminata","type":"related"},{"name":"osteopoikilosis with melorheostosis","type":"related"},{"name":"osteopoikilosis with or without melorheostosis","type":"exact"},{"name":"osteopoikilosis, isolated","type":"related"}],"termid":"MONDO:0008157","terms_by_termid":{"MONDO:0008157":null},"xrefs":{"Monarch":{"xref_id":"0008157"}}}


id: MONDO:0008105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nose, anomalous shape of","secondary_identifiers":["MESH:C538354","OMIM:164000","UMLS:C1834118","MEDGEN:331668"],"synonyms":[{"name":"nose, anomalous shape of","type":"exact"},{"name":"potato Nose","type":"related"}],"termid":"MONDO:0008105","xrefs":{"Monarch":{"xref_id":"0008105"}}}


id: PR:P40370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1815.01","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno101","type":"exact"}],"termid":"PR:P40370"}


id: PBO:0049043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 34","termid":"PBO:0049043"}


id: GO:0040007
data:
  {"annotated_genes":["SJAG_03602","SJAG_00514","SJAG_03581","SJAG_02392","SJAG_04322","SJAG_03705","SJAG_00124","SJAG_04724","SJAG_00244","SJAG_04509","SJAG_04312","SJAG_02723","SJAG_03486","SJAG_01456","SJAG_02169","SJAG_02838","SJAG_00993","SJAG_00216","SJAG_01017","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91813,96527,97796],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[89836,95966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[90000,112751,105440,118479,119905,108824,101693],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051523"},{"annotations":[76319,78194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030447"},{"annotations":[121623,121622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030448"},{"annotations":[92671],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[108624],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0030307"},{"annotations":[117046],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"},{"annotations":[100382],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"The increase in size or mass of an entire organism, a part of an organism or a cell.","definition_xrefs":["GOC:ma","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01181":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03602":null,"SJAG_03705":null,"SJAG_04312":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:34427722":null},"secondary_identifiers":["GO:0048590"],"synonyms":[{"name":"growth pattern","type":"related"},{"name":"non-developmental growth","type":"related"}],"termid":"GO:0040007","terms_by_termid":{"GO:0030307":null,"GO:0030447":null,"GO:0030448":null,"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061387":null}}


id: GO:0050198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamoyl-CoA + 3 H+ + 3 malonyl-CoA = 4 CO2 + 4 CoA + pinosylvin.","definition_xrefs":["RHEA:12552","EC:2.3.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"pinosylvin synthase activity","secondary_identifiers":["KEGG_REACTION:R02505","MetaCyc:PINOSYLVIN-SYNTHASE-RXN"],"synonyms":[{"name":"malonyl-CoA:cinnamoyl-CoA malonyltransferase (cyclizing)","type":"related"},{"name":"pine stilbene synthase activity","type":"related"},{"name":"stilbene synthase activity","type":"broad"}],"termid":"GO:0050198"}


id: MOD:01066
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-phenylalanine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated phenylalanine","synonyms":[{"name":"HalPhe","type":"exact"}],"termid":"MOD:01066"}


id: PBO:0088766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Rpp40","termid":"PBO:0088766"}


id: PBO:0077644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 1","termid":"PBO:0077644"}


id: PR:Q9P797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup131 gene.","definition_xrefs":["UniProtKB:Q9P797","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup131 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.06c","synonyms":[{"name":"Spom972h-nup131","type":"exact"},{"name":"nuclear pore protein nup131 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P797"}


id: PBO:0084174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hippo-like kinase of the Mitotic Exit Network; promotes exit by activating the Dbf2p kinase; component of a non-canonical Hippo pathway with Sps1p required for prospore membrane closure, spindle disassembly and sustained release of Cdc14p during meiotic anaphase II; complexes with Sps1p and contributes to its phosphorylation; phosphorylates the RNAPII CTD during mitosis; localizes to the bud neck and SPB during anaphase and telophase; relocalizes to the cytoplasm upon DNA replication stress","termid":"PBO:0084174"}


id: GO:0043210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to alkanesulfonates, the anion of alkanesulfonic acids, sulfonic acid derivatives containing an aliphatic hydrocarbon group.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alkanesulfonate binding","termid":"GO:0043210"}


id: MONDO:0002824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cardiomyopathy that is not due to abnormalities in heart muscle cells.","definition_xrefs":["Wikipedia:Cardiomyopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"extrinsic cardiomyopathy","secondary_identifiers":["SCTID:195029002","UMLS:C1689817","DOID:3978","MEDGEN:739084","ICD9:425.8"],"synonyms":[{"name":"secondary cardiomyopathy","type":"exact"}],"termid":"MONDO:0002824","xrefs":{"Monarch":{"xref_id":"0002824"}}}


id: PBO:0069351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 611, pseudogene","termid":"PBO:0069351"}


id: MONDO:0017342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus-related tumor","secondary_identifiers":["Orphanet:289638","GARD:21146","UMLS:C5679942","MEDGEN:1842315"],"synonyms":[{"name":"EBV-related tumor","type":"exact"},{"name":"EBV-related tumour","type":"exact"}],"termid":"MONDO:0017342","xrefs":{"Monarch":{"xref_id":"0017342"}}}


id: GO:0072751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-thialysine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to L-thialysine","termid":"GO:1901345"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-thialysine","synonyms":[{"name":"cellular response to thialysine","type":"broad"}],"termid":"GO:0072751"}


id: PBO:0054809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2222","termid":"PBO:0054809"}


id: PBO:0114351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Dip5","termid":"PBO:0114351"}


id: GO:0102834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:0-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:0-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:7948918","PMID:8066133"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:0-monogalactosyldiacylglycerol acyl-lipid omega-6 desaturase activity (obsolete GO:0102834)","termid":"GO:0102834"}


id: PBO:0004167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthase (predicted)","termid":"PBO:0004167"}


id: GO:0002765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately leading to inhibition of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"immune response-inhibiting signal transduction","termid":"GO:0002765"}


id: MONDO:0009695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"myeloproliferative disease, autosomal recessive","secondary_identifiers":["UMLS:C1850779","MEDGEN:338119","MESH:C564977","OMIM:254700"],"synonyms":[{"name":"myeloproliferative disease, autosomal recessive","type":"exact"}],"termid":"MONDO:0009695","xrefs":{"Monarch":{"xref_id":"0009695"}}}


id: PBO:0038588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA carboxylase beta","termid":"PBO:0038588"}


id: PBO:0051315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-108 (non-functional)","termid":"PBO:0051315"}


id: PBO:0026957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_microtubule_depolymerization_ahead_of_moving_spindle_pole_body","termid":"PBO:0026957"}


id: PBO:0056734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 3","termid":"PBO:0056734"}


id: GO:1902681
data:
  {"annotated_genes":["SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105182],"is_not":false,"summary":null,"term":"GO:1902681"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of replication fork arrest at rDNA repeats.","definition_xrefs":["GOC:TermGenie","PMID:23260662","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"regulates","term_name":"replication fork arrest at rDNA repeats","termid":"GO:0031582"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of replication fork arrest at rDNA repeats","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"regulation of replication fork blocking at rDNA repeats","type":"exact"}],"termid":"GO:1902681","terms_by_termid":{"GO:1902681":null}}


id: PBO:0072976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2A member 2","termid":"PBO:0072976"}


id: MONDO:0012931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the APOL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal segmental glomerulosclerosis 4, susceptibility to","secondary_identifiers":["MEDGEN:390820","OMIM:612551","UMLS:C2675525"],"synonyms":[{"name":"APOL1 focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS4","type":"related"},{"name":"end-stage renal disease, nondiabetic, susceptibility to","type":"related"},{"name":"focal segmental glomerulosclerosis 4, susceptibility to","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in APOL1","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 4, susceptibility to","type":"exact"},{"name":"susceptibility to focal segmental glomerulosclerosis 4","type":"related"}],"termid":"MONDO:0012931","xrefs":{"Monarch":{"xref_id":"0012931"}}}


id: PBO:0086265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that stimulates strand exchange; stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad55p","termid":"PBO:0086265"}


id: MONDO:0100485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodevelopmental disorder in which the cause of the disease is a mutation in the KCNH1 gene. Variants in KCNH1 cause significant neurodevelopmental disabilities that lie along a phenotypic spectrum ranging from non-syndromic to syndromic. The most common phenotypes associated with variants in KCNH1 include intellectual disability, seizures, hypotonia, absence or hypoplasia of nails, and gingival enlargement. Hypoplastic terminal phalanges of fingers and toes, proximal placement and long thumb, and long toes present less frequently.","definition_xrefs":["PMID:25420144","PMID:25915598","PMID:33811134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"KCNH1 associated disorder","synonyms":[{"name":"KCNH1 related disorder","type":"exact"}],"termid":"MONDO:0100485","xrefs":{"Monarch":{"xref_id":"0100485"}}}


id: MONDO:0020751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited orthostatic hypotension","termid":"MONDO:0021272"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthostatic hypotension 2","secondary_identifiers":["OMIM:618182","UMLS:C4748569","MEDGEN:1648282"],"termid":"MONDO:0020751","xrefs":{"Monarch":{"xref_id":"0020751"}}}


id: GO:1903454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androst-4-ene-3,17-dione biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:24399684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"androst-4-ene-3,17-dione biosynthetic process","termid":"GO:1903449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of androst-4-ene-3,17-dione biosynthetic process","synonyms":[{"name":"regulation of androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"regulation of androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"regulation of androst-4-ene-3,17-dione formation","type":"exact"},{"name":"regulation of androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"regulation of androstenedione biosynthetic process","type":"exact"}],"termid":"GO:1903454"}


id: MONDO:0009647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 4","termid":"MONDO:0018938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"Morquio syndrome C","secondary_identifiers":["UMLS:C2931140","MESH:C536247","OMIM:252300","GARD:7059","MEDGEN:443986"],"synonyms":[{"name":"Morquio syndrome C","type":"exact"},{"name":"Morquio syndrome type C","type":"exact"},{"name":"Morquio syndrome, Nonkeratosulfate-Excreting type","type":"related"}],"termid":"MONDO:0009647","xrefs":{"Monarch":{"xref_id":"0009647"}}}


id: GO:0033606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a chemokine receptor within a lipid bilayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport within lipid bilayer","termid":"GO:0032594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"chemokine receptor transport within lipid bilayer","synonyms":[{"name":"chemokine receptor translocation within membrane","type":"exact"}],"termid":"GO:0033606"}


id: GO:1905518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of presynaptic active zone assembly.","definition_xrefs":["PMID:15797875","GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"presynaptic active zone assembly","termid":"GO:1904071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic active zone assembly","synonyms":[{"name":"regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"regulation of pre-synaptic active zone formation","type":"exact"},{"name":"regulation of presynaptic active zone formation","type":"exact"}],"termid":"GO:1905518"}


id: GO:0031940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chromatin silencing at telomeres.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chromatin silencing at telomere (obsolete GO:0031940)","synonyms":[{"name":"activation of chromatin silencing at telomere","type":"narrow"},{"name":"positive regulation of heterochromatic silencing at telomere","type":"exact"},{"name":"stimulation of chromatin silencing at telomere","type":"narrow"},{"name":"up regulation of chromatin silencing at telomere","type":"exact"},{"name":"up-regulation of chromatin silencing at telomere","type":"exact"},{"name":"upregulation of chromatin silencing at telomere","type":"exact"}],"termid":"GO:0031940"}


id: PBO:0058303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4677","termid":"PBO:0058303"}


id: PBO:0072157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 34","termid":"PBO:0072157"}


id: PBO:0083197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene KNS1","termid":"PBO:0083197"}


id: MONDO:0859175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis-like nephropathy 2","secondary_identifiers":["MEDGEN:1794163","UMLS:C5561953","OMIM:619468"],"termid":"MONDO:0859175","xrefs":{"Monarch":{"xref_id":"0859175"}}}


id: PBO:0044994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH1 antisense RNA 1","termid":"PBO:0044994"}


id: PBO:0086573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; contained within the solo Ty1 LTR element YDRWdelta7","termid":"PBO:0086573"}


id: GO:0004732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:  pyridoxal + H2O + O2 = 4-pyridoxate + H+ + H2O2.","definition_xrefs":["RHEA:23724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde oxidase activity","termid":"GO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pyridoxal oxidase activity","secondary_identifiers":["EC:1.2.3.8","MetaCyc:PYRIDOXAL-OXIDASE-RXN"],"synonyms":[{"name":"pyridoxal:oxygen 4-oxidoreductase activity","type":"related"}],"termid":"GO:0004732"}


id: MONDO:1012336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency due to amino-acid transport defect, non-human animal","termid":"MONDO:1011698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency due to amino-acid transport defect, sheep","secondary_identifiers":["OMIA:001234-9940"],"termid":"MONDO:1012336","xrefs":{"Monarch":{"xref_id":"1012336"}}}


id: FYPO:0002524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NADPH-hemoprotein reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal NADPH-hemoprotein reductase activity","termid":"FYPO:0002523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased NADPH-hemoprotein reductase activity","termid":"FYPO:0002524"}


id: PBO:0028197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hypothemycin","termid":"PBO:0028197"}


id: PBO:0038355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_ligand","termid":"PBO:0038355"}


id: FYPO:0003750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a normal number of nuclear pore complexes.","definition_xrefs":["PMID:9372936","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal nuclear pore density","synonyms":[{"name":"normal NPC density","type":"exact"},{"name":"normal nuclear pore complex density","type":"exact"},{"name":"normal nuclear pore density during mitotic cell cycle","type":"exact"},{"name":"normal nuclear pore density during vegetative growth","type":"exact"},{"name":"nuclear pore complexes present in normal number","type":"exact"},{"name":"nuclear pores present in normal number","type":"exact"}],"termid":"FYPO:0003750"}


id: MONDO:0018571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 5","termid":"MONDO:0016904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractures-developmental delay-Pierre Robin syndrome","secondary_identifiers":["GARD:21816","MEDGEN:1805516","UMLS:C5680042","Orphanet:436003"],"synonyms":[{"name":"5q23 microdeletion syndrome","type":"exact"}],"termid":"MONDO:0018571","xrefs":{"Monarch":{"xref_id":"0018571"}}}


id: MONDO:0015769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy of the short arm of chromosome 6 is characterized by pre- and postnatal growth retardation, a pattern of specific facial features (mostly of the eyes), microcephaly, and developmental delay.","definition_xrefs":["Orphanet:1745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 6","termid":"MONDO:0016943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 6p","secondary_identifiers":["UMLS:C4302551","GARD:18745","MEDGEN:928220","SCTID:722430008"],"synonyms":[{"name":"distal duplication 6p","type":"exact"},{"name":"distal trisomy type 6p","type":"exact"},{"name":"telomeric duplication 6p","type":"exact"},{"name":"trisomy 6pter","type":"exact"}],"termid":"MONDO:0015769","xrefs":{"Monarch":{"xref_id":"0015769"}}}


id: PBO:0038870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aarF domain containing kinase 1","termid":"PBO:0038870"}


id: GO:0098669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a preexisting viral infection prevents a secondary infection with the same or a closely related virus. Typically some aspect of viral entry is inhibited, but post entry mechanisms have also been documented.","definition_xrefs":["PMID:11985726","VZ:3971","PMID:8012757","PMID:23692331","PMID:24089557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superinfection exclusion","termid":"GO:0098669"}


id: PBO:0063132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP1 binding protein","termid":"PBO:0063132"}


id: GO:0050292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + pregna-4,9(11)-diene-3,20-dione = 9,11alpha-epoxypregn-4-ene-3,20-dione + A + H2O.","definition_xrefs":["RHEA:19557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"steroid 9-alpha-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04392","MetaCyc:STEROID-9-ALPHA-MONOOXYGENASE-RXN","EC:1.14.99.24"],"synonyms":[{"name":"steroid 9-alpha-hydroxylase activity","type":"related"},{"name":"steroid 9a-monooxygenase activity","type":"exact"},{"name":"steroid 9alpha-hydroxylase activity","type":"related"},{"name":"steroid 9alpha-monooxygenase activity","type":"related"},{"name":"steroid,hydrogen-donor:oxygen oxidoreductase (9-epoxidizing)","type":"related"}],"termid":"GO:0050292"}


id: FYPO:0001906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to thiamine starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to thiamine starvation","synonyms":[{"name":"abnormal cellular response to thiamin starvation","type":"exact"},{"name":"abnormal cellular response to thiamine depletion","type":"exact"},{"name":"abnormal cellular response to thiamine deprivation","type":"exact"},{"name":"abnormal cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"abnormal cellular response to vitamin B1 starvation","type":"exact"}],"termid":"FYPO:0001906"}


id: PBO:0038941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 5","termid":"PBO:0038941"}


id: PBO:0027473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mtDNA_absent_from_cell","termid":"PBO:0027473"}


id: MONDO:1010746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in dogs in which the cause of the disease is a mutation in the ADAMTS2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, dog","termid":"MONDO:1011493"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dermatosparaxis type, ADAMTS2-related, dog","secondary_identifiers":["OMIA:000328-9615"],"synonyms":[{"name":"dEDS","type":"exact"}],"termid":"MONDO:1010746","xrefs":{"Monarch":{"xref_id":"1010746"}}}


id: GO:0102259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 1,2-diacyl-sn-glycerol = a monoglyceride + a fatty acid.","definition_xrefs":["PMID:1477884","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-diacylglycerol acylhydrolase activity (obsolete GO:0102259)","termid":"GO:0102259"}


id: PBO:0084206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; phosphorylated by Cdc28p; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication","termid":"PBO:0084206"}


id: PBO:0091034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit Vps71","termid":"PBO:0091034"}


id: PBO:0052525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 40","termid":"PBO:0052525"}


id: GO:0030907
data:
  {"annotated_genes":["SJAG_00693","SJAG_01157","SJAG_04381","SJAG_01728","SJAG_02810","SJAG_00987"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77696,79286,79328,105908,108698,110207],"is_not":false,"summary":null,"term":"GO:0030907"}]},"cv_name":"cellular_component","definition":"A protein complex that binds to the Mlu1 cell cycle box (MCB) promoter element, consensus sequence ACGCGN, and is involved in regulation of transcription during the G1/S transition of the cell cycle. In Saccharomyces, the complex contains a heterodimer of the DNA binding protein Mbp1p and the activator Swi6p, and is associated with additional proteins known as Nrm1p, Msa1p, and Msa2p; in Schizosaccharomyces the complex contains Res1p, Res2p, and Cdc10p.","definition_xrefs":["PMID:9343385","PMID:18160399","GOC:mah","PMID:11206552","PMID:15838511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00693":null,"SJAG_00987":null,"SJAG_01157":null,"SJAG_01728":null,"SJAG_02810":null,"SJAG_04381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"MBF transcription complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DSC1 transcription factor complex","type":"exact"},{"name":"MBF","type":"exact"},{"name":"Mlu1-box binding factor","type":"exact"}],"termid":"GO:0030907","terms_by_termid":{"GO:0030907":null}}


id: PBO:0058324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4697","termid":"PBO:0058324"}


id: SO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ds_DNA_viral_sequence is a viral_sequence that is the sequence of a virus that exists as double stranded DNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_DNA_viral_sequence","synonyms":[{"name":"double stranded DNA virus","type":"exact"},{"name":"ds DNA viral sequence","type":"exact"}],"termid":"SO:0001198"}


id: RO:HOM0000009
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homoplasy that involves phenotypes similar to those seen in ancestors within the lineage.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homoplasy_relationship_with","termid":"RO:HOM0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_reversal_relationship_with","synonyms":[{"name":"atavism","type":"exact"},{"name":"reversion","type":"related"},{"name":"rudiment","type":"exact"}],"termid":"RO:HOM0000009"}


id: FYPO:0001999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased nucleoside diphosphate kinase activity","termid":"FYPO:0001999"}


id: PBO:0076556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymus, brain and testes associated","termid":"PBO:0076556"}


id: FYPO:0001760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell separation after cytokinesis","synonyms":[{"name":"normal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"normal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"normal cell separation after cytokinesis following mitosis","type":"exact"},{"name":"normal mitotic cytokinetic cell separation","type":"exact"},{"name":"normal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0001760"}


id: GO:0141204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dipeptide from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["PMID:38507452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"},{"relation_name":"is_a","term_name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"dipeptide transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"dipeptide export from lysosomal lumen","type":"exact"},{"name":"dipeptide export from lysosome","type":"exact"},{"name":"transmembrane dipeptide transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:0141204"}


id: FYPO:0000203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which ergosterol biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal ergosterol biosynthetic process","synonyms":[{"name":"abnormal ergosterol biosynthesis","type":"exact"},{"name":"abnormal ergosterol biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal ergosterol biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0000203"}


id: PBO:0026717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell","termid":"PBO:0026717"}


id: GO:0030705
data:
  {"annotated_genes":["SJAG_05319","SJAG_01662","SJAG_02761","SJAG_04001","SJAG_02737","SJAG_01775","SJAG_03540","SJAG_04143","SJAG_02731","SJAG_00113","SJAG_01371","SJAG_02651","SJAG_02336","SJAG_00851","SJAG_00397","SJAG_01546","SJAG_02431","SJAG_05220","SJAG_05185","SJAG_02286","SJAG_00140","SJAG_03073","SJAG_03673","SJAG_04597","SJAG_03437","SJAG_03011","SJAG_00594","SJAG_01370","SJAG_01613","SJAG_02045","SJAG_05266","SJAG_02561","SJAG_01297","SJAG_01863","SJAG_01224","SJAG_00918","SJAG_01211","SJAG_00368","SJAG_00332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93796,105212,102686,92939,104921,113044,113395,89702,97159,93332,99526,115943,118946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[103394,108560,113218],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[99601,101184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[78218,89706,101185,93334,99528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[96362],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[105700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[105857,110243,120687,102345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[110865,118917,98723,102482,100576,91089,91696,109479,116094,111877,92927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[93099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"},{"annotations":[118181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"},{"annotations":[106838,106505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of substances along cytoskeletal fibers such as microfilaments or microtubules within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03011":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cytoskeleton-dependent intracellular transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030705","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030050":null,"GO:0030989":null,"GO:0032118":null,"GO:0047496":null,"GO:0090561":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1990976":null}}


id: FYPO:0006485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4-bisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4)P2 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4-bisphosphate level","type":"exact"}],"termid":"FYPO:0006485"}


id: PBO:0045937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A2","termid":"PBO:0045937"}


id: MONDO:0018800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kallmann syndrome (KS) is a developmental genetic disorder characterized by the association of congenital hypogonadotropic hypogonadism (CHH) due to gonadotropin-releasing hormone (GnRH) deficiency, and anosmia or hyposmia (with hypoplasia or aplasia of the olfactory bulbs).","definition_xrefs":["Orphanet:478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kallmann syndrome","secondary_identifiers":["ICD9:253.4","NORD:1319","DOID:3614","MEDGEN:102469","MESH:D017436","GARD:10771","ICD10CM:E23.0","NANDO:2200381","NCIT:C75479","MedDRA:10053142","SCTID:93559003","UMLS:C0162809"],"synonyms":[{"name":"Kallman syndrome","type":"exact"},{"name":"Kallman's syndrome","type":"exact"},{"name":"Olfacto-genital pathological sequence","type":"exact"},{"name":"congenital hypogonadotropic hypogonadism with anosmia","type":"exact"},{"name":"familial hypogonadism with anosmia","type":"exact"},{"name":"hypogonadism with anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism with anosmia","type":"exact"}],"termid":"MONDO:0018800","xrefs":{"Monarch":{"xref_id":"0018800"}}}


id: GO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the rate or extent of the phosphorylation of IRF3 (interferon regulatory factor-3), thereby inhibiting IRF3 activation. In response to signaling from RIG-1/MDA-5 receptors, IRF3 is phosphorylated on multiple serine and threonine residues; phosphorylation results in the cytoplasm-to-nucleus translocation of IRF3, DNA binding, and increased transcriptional activation of interferon-encoding genes.","definition_xrefs":["PMID:11124948","PMID:20631144","PMID:12829834","PMID:9566918"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation (obsolete GO:0039549)","synonyms":[{"name":"inhibition of phosphorylation-induced activation of host IRF3","type":"related"},{"name":"inhibition of virus-induced IRF-3 phosphorylation","type":"broad"}],"termid":"GO:0039549"}


id: MONDO:0008115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Feingold syndrome type 1 (FS1) is a rare inherited malformation syndrome characterized by microcephaly, short stature and numerous digital anomalies.","definition_xrefs":["Orphanet:391641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Feingold syndrome","termid":"MONDO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Feingold syndrome type 1","secondary_identifiers":["GARD:17624","SCTID:702431004","OMIM:164280","UMLS:C4551774","MEDGEN:1637716","ICD9:759.89"],"synonyms":[{"name":"Brunner-Winter syndrome type 1","type":"exact"},{"name":"FGLDS1","type":"exact"},{"name":"FS1","type":"exact"},{"name":"Feingold syndrome","type":"related"},{"name":"Feingold syndrome 1","type":"related"},{"name":"Feingold syndrome caused by mutation in MYCN","type":"exact"},{"name":"Feingold syndrome type 1","type":"exact"},{"name":"MMT type 1","type":"exact"},{"name":"MODED syndrome type 1","type":"exact"},{"name":"MYCN Feingold syndrome","type":"exact"},{"name":"Mmt syndrome","type":"related"},{"name":"ODED syndrome type 1","type":"exact"},{"name":"Oded syndrome","type":"related"},{"name":"digital anomalies with short palpebral fissures and atresia of esophagus or duodenum","type":"related"},{"name":"digital anomalies with short palpebral fissures and atresia of esophagus or duodenum type 1","type":"exact"},{"name":"digital anomalies with short palpebral fissures and atresia of oesophagus or duodenum","type":"related"},{"name":"digital anomalies with short palpebral fissures and atresia of oesophagus or duodenum type 1","type":"exact"},{"name":"microcephaly and digital abnormalities with normal intelligence","type":"related"},{"name":"microcephaly, intellectual disability, and tracheoesophageal fistula syndrome","type":"related"},{"name":"microcephaly, mental retardation, and tracheoesophageal fistula syndrome","type":"related"},{"name":"microcephaly-digital anomalies-normal intelligence syndrome type 1","type":"exact"},{"name":"microcephaly-intellectual disability-tracheoesophageal fistula syndrome type 1","type":"exact"},{"name":"microcephaly-oculo-digito-esophageal-duodenal syndrome","type":"related"},{"name":"microcephaly-oculo-digito-esophageal-duodenal syndrome syndrome type 1","type":"exact"},{"name":"oculo-digito-esophageal-duodenal syndrome type 1","type":"exact"},{"name":"oculodigitoesophagoduodenal syndrome","type":"related"}],"termid":"MONDO:0008115","xrefs":{"Monarch":{"xref_id":"0008115"}}}


id: PBO:0082855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII)","termid":"PBO:0082855"}


id: PATO:0002411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and brown hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow brown","termid":"PATO:0002411"}


id: PBO:0011106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome C oxidase transmembrane region (subunit 2 variant)","termid":"PBO:0011106"}


id: PBO:0029196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_mitotic_M_phase","termid":"PBO:0029196"}


id: SO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_J_cluster","synonyms":[{"name":"V VJ J cluster","type":"exact"},{"name":"V-(VJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000525"}


id: PBO:0042242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 5","termid":"PBO:0042242"}


id: GO:1904050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spontaneous neurotransmitter secretion.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie","PMID:22314364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"regulation of spontaneous neurotransmitter secretion","termid":"GO:1904048"},{"relation_name":"positively_regulates","term_name":"spontaneous neurotransmitter secretion","termid":"GO:0061669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of spontaneous neurotransmitter secretion","synonyms":[{"name":"activation of spontaneous neurotransmitter secretion","type":"narrow"},{"name":"activation of stimulus-independent neurotransmitter secretion","type":"narrow"},{"name":"positive regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"up regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"up regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"up-regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"up-regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"upregulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"upregulation of stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:1904050"}


id: GO:0016651
data:
  {"annotated_genes":["SJAG_02016","SJAG_04270","SJAG_02154","SJAG_02697","SJAG_05033","SJAG_00235","SJAG_03098","SJAG_05015","SJAG_04152","SJAG_04397","SJAG_03476","SJAG_02794","SJAG_02395","SJAG_01539","SJAG_02191","SJAG_00972","SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65933,78969,97061,97062],"is_not":false,"summary":null,"term":"GO:0016651"},{"annotations":[79547,79912,60241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004128"},{"annotations":[80329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003955"},{"annotations":[114853,98669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050136"},{"annotations":[66159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003959"},{"annotations":[79115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003958"},{"annotations":[69677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016652"},{"annotations":[81917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016653"},{"annotations":[81056,81145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050664"},{"annotations":[76279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003960"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00972":null,"SJAG_01539":null,"SJAG_01869":null,"SJAG_02016":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02395":null,"SJAG_02697":null,"SJAG_02794":null,"SJAG_03098":null,"SJAG_03476":null,"SJAG_04152":null,"SJAG_04270":null,"SJAG_04397":null,"SJAG_05015":null,"SJAG_05033":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-109343","Reactome:R-HSA-8956458","EC:1.6.-.-"],"synonyms":[{"name":"NAD(P)H dehydrogenase","type":"narrow"},{"name":"oxidoreductase activity, acting on NADH or NADPH","type":"related"},{"name":"oxidoreductase activity, acting on NADH or NADPH, other acceptor","type":"narrow"}],"termid":"GO:0016651","terms_by_termid":{"GO:0003955":null,"GO:0003958":null,"GO:0003959":null,"GO:0003960":null,"GO:0004128":null,"GO:0016651":null,"GO:0016652":null,"GO:0016653":null,"GO:0050136":null,"GO:0050664":null}}


id: FYECO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which guanosine triphosphate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ GTP","synonyms":[{"name":"+ guanosine triphosphate","type":"exact"}],"termid":"FYECO:0000115"}


id: GO:0046329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of JNK cascade","termid":"GO:0046328"},{"relation_name":"negatively_regulates","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of JNK cascade","synonyms":[{"name":"down regulation of JNK cascade","type":"exact"},{"name":"down-regulation of JNK cascade","type":"exact"},{"name":"downregulation of JNK cascade","type":"exact"},{"name":"inhibition of JNK cascade","type":"narrow"}],"termid":"GO:0046329"}


id: MONDO:0013437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PDE6A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PDE6A-related retinopathy","termid":"MONDO:0700224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 43","secondary_identifiers":["GARD:15716","UMLS:C3151139","ICD10CM:H35.5","MEDGEN:462489","DOID:0110379","OMIM:613810"],"synonyms":[{"name":"PDE6A retinitis pigmentosa","type":"exact"},{"name":"RP43","type":"exact"},{"name":"retinitis pigmentosa 43","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PDE6A","type":"exact"},{"name":"retinitis pigmentosa type 43","type":"exact"}],"termid":"MONDO:0013437","xrefs":{"Monarch":{"xref_id":"0013437"}}}


id: PBO:0003981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR7 ortholog","termid":"PBO:0003981"}


id: GO:0072344
data:
  {"annotated_genes":["SJAG_00898","SJAG_03428","SJAG_03106","SJAG_05000","SJAG_02096","SJAG_01497","SJAG_00188","SJAG_02746","SJAG_03189","SJAG_01074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65565,71734,77246,78511,80077,105087,105565,107600,118086],"is_not":false,"summary":null,"term":"GO:0072344"},{"annotations":[116409],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"}]},"cv_name":"biological_process","definition":"A process of translational elongation that takes place when a ribosome has stalled during translation, and results in freeing the ribosome from the stalled translation complex.","definition_xrefs":["GOC:mah","PMID:20117091","PMID:20185543","PMID:19170872","PMID:18557701","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"is_a","term_name":"ribosome disassembly","termid":"GO:0032790"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03106":null,"SJAG_03189":null,"SJAG_03428":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"rescue of stalled ribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0072344","terms_by_termid":{"GO:0072344":null,"GO:0140708":null}}


id: GO:0039722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a toll-like receptor signaling pathway in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17299722","PMID:18327267","PMID:15944308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host toll-like receptor signaling pathway","synonyms":[{"name":"inhibition of host TLR pathway by virus","type":"narrow"},{"name":"suppression by virus of host TLR signaling pathway","type":"narrow"},{"name":"suppression by virus of host toll-like receptor signaling pathway","type":"narrow"}],"termid":"GO:0039722"}


id: SO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone invalidated because it is chimeric.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_chimeric_cDNA","termid":"SO:0000362"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chimeric_cDNA_clone","synonyms":[{"name":"chimeric cDNA clone","type":"exact"}],"termid":"SO:0000810"}


id: PBO:0051515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 5","termid":"PBO:0051515"}


id: PBO:0052849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-5","termid":"PBO:0052849"}


id: PBO:0029622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029622"}


id: MONDO:0015398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemifacial microsomia (obsolete MONDO:0015398)","termid":"MONDO:0015398","xrefs":{"Monarch":{"xref_id":"0015398"}}}


id: PBO:0041341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 38","termid":"PBO:0041341"}


id: GO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit mitochondrial RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["PMID:20701995","GOC:txnOH","PMID:2088182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-subunit type RNA polymerase binding","termid":"GO:0001050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"mitochondrial single-subunit type RNA polymerase binding","termid":"GO:0001001"}


id: PATO:0000099
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000099 plant growth hormone sensitivity (obsolete PATO:0000099)","termid":"PATO:0000099"}


id: PBO:0056158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACROD2 antisense RNA 1","termid":"PBO:0056158"}


id: GO:0046984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemoglobin biosynthetic process","synonyms":[{"name":"regulation of haemoglobin biosynthesis","type":"exact"},{"name":"regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"regulation of hemoglobin anabolism","type":"exact"},{"name":"regulation of hemoglobin biosynthesis","type":"exact"},{"name":"regulation of hemoglobin formation","type":"exact"},{"name":"regulation of hemoglobin synthesis","type":"exact"}],"termid":"GO:0046984"}


id: PBO:0001390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MutS protein Msh1 (predicted)","termid":"PBO:0001390"}


id: PBO:0110199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1.2","termid":"PBO:0110199"}


id: PBO:0031143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chromosome_loss_during_mitotic_chromosome_segregation","termid":"PBO:0031143"}


id: PBO:0003107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamine","termid":"PBO:0003107"}


id: MONDO:0002867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic adenocarcinoma that arises from the pancreas. It includes the acinar cell and serous cystadenocarcinoma subtypes.","definition_xrefs":["NCIT:C3874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"pancreatic adenocarcinoma","termid":"MONDO:0006047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic cystadenocarcinoma","secondary_identifiers":["MEDGEN:66767","DOID:4073","SCTID:235966007","UMLS:C0238337"],"synonyms":[{"name":"cystadenocarcinoma - pancreas","type":"exact"},{"name":"cystadenocarcinoma of pancreas","type":"exact"},{"name":"cystadenocarcinoma of the pancreas","type":"exact"},{"name":"pancreas cystadenocarcinoma","type":"exact"},{"name":"pancreatic cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0002867","xrefs":{"Monarch":{"xref_id":"0002867"}}}


id: GO:0097558
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left ventral basal body and exits the cell body proximally and dorsal to the ventral disc.","definition_xrefs":["PMID:16607022","GOC:giardia","ISBN:9780124260207","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left ventral flagellum","synonyms":[{"name":"left ventral cilium","type":"exact"}],"termid":"GO:0097558"}


id: GO:0106200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of amino acids and peptides linked to the hydrolysis of a nucleoside triphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on amio acids and peptides linked to the hydrolysis of a nucleoside triphosphate (obsolete GO:0106200)","termid":"GO:0106200"}


id: GO:0032934
data:
  {"annotated_genes":["SJAG_04018","SJAG_00054","SJAG_01329","SJAG_00355","SJAG_02375","SJAG_01722","SJAG_03718","SJAG_02323","SJAG_01407","SJAG_01590"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63185,64906,78882,92369],"is_not":false,"summary":null,"term":"GO:0032934"},{"annotations":[110185,96195,118221,113324,74206,72883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008142"}]},"cv_name":"molecular_function","definition":"Binding to a sterol, a steroid containing a hydroxy group in the 3 position, closely related to cholestan-3-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03718":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"sterol binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005498"],"synonyms":[{"name":"sterol carrier activity","type":"related"}],"termid":"GO:0032934","terms_by_termid":{"GO:0008142":null,"GO:0032934":null}}


id: PBO:0084601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR312C-B was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, SPH1/YLR313C","termid":"PBO:0084601"}


id: GO:0050067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + O2 = 5-aminopentanamide + CO2 + H2O.","definition_xrefs":["EC:1.13.12.2","RHEA:14601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"lysine 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00449","MetaCyc:LYSINE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"L-lysine-2-monooxygenase activity","type":"related"},{"name":"L-lysine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"lysine monooxygenase activity","type":"related"},{"name":"lysine oxygenase activity","type":"related"}],"termid":"GO:0050067"}


id: PBO:0053461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 421","termid":"PBO:0053461"}


id: SO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA that is generated by backsplicing of exons or introns, resulting in a covalently closed loop without a 5’ cap or 3’ polyA tail.","definition_xrefs":["PMID:29182528","PMID:29230098","PMID:29576969","PMID:29626935","PMID:29086764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_ncRNA","synonyms":[{"name":"circRNA","type":"broad"},{"name":"circular ncRNA","type":"exact"},{"name":"noncoding circRNA","type":"exact"}],"termid":"SO:0002291"}


id: MONDO:0008382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of retinoschisis.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"retinoschisis","termid":"MONDO:0004579"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"retinoschisis, autosomal dominant","secondary_identifiers":["GARD:9144","MEDGEN:357940","MESH:C000598640","OMIM:180270","UMLS:C1867235"],"synonyms":[{"name":"autosomal dominant retinoschisis","type":"exact"},{"name":"retinoschisis autosomal dominant","type":"related"},{"name":"retinoschisis, autosomal dominant","type":"exact"}],"termid":"MONDO:0008382","xrefs":{"Monarch":{"xref_id":"0008382"}}}


id: FYECO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which inositol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ inositol","termid":"FYECO:0000064"}


id: PBO:0061783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occludin","termid":"PBO:0061783"}


id: PBO:0086055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; S/T rich and highly similar to YOL155C, a putative glucan alpha-1,4-glucosidase; transcript is induced in both high and low pH environments; non-essential gene","termid":"PBO:0086055"}


id: GO:0034296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which zygospores are formed. Zygospores are characteristic of the zygomycete fungi (phylum Zygomycota) thick-walled and darkly colored, and usually heavily ornamented as well, with many spines or ridges. It is formed between two specialized organs called suspensors, which are themselves usually heavily ornamented, one from each mating partner. The zygospore forms between them and then breaks away.","definition_xrefs":["GOC:ds","GOC:mah","PMID:21858438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"zygospore formation","termid":"GO:0034296"}


id: PBO:0068476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 55, pseudogene","termid":"PBO:0068476"}


id: PATO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000775 learning value (obsolete PATO:0000775)","termid":"PATO:0000775"}


id: PBO:0076865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX13 family member C","termid":"PBO:0076865"}


id: PBO:0029684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_iron_ion_starvation","termid":"PBO:0029684"}


id: FYPO:0001154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of methylamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular methylamine level","synonyms":[{"name":"increased cellular methylamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular methylamine level during vegetative growth","type":"exact"},{"name":"increased methylamine accumulation","type":"related"}],"termid":"FYPO:0001154"}


id: GO:0002953
data:
  {"annotated_genes":["SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81545],"is_not":false,"summary":null,"term":"GO:0002953"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-phosphate + H2O = a 2'-deoxyribonucleoside + phosphate.","definition_xrefs":["RHEA:36167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01055":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"5'-deoxynucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.1.3.89"],"termid":"GO:0002953","terms_by_termid":{"GO:0002953":null}}


id: MOD:00200
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to D-methionine.","definition_xrefs":["PubMed:16033333","RESID:AA0193","ChEBI:29984","PubMed:2542051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-methionine","synonyms":[{"name":"(2R)-2-amino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butyric acid","type":"exact"},{"name":"D-Met","type":"exact"},{"name":"D-methionine","type":"exact"},{"name":"MOD_RES D-methionine","type":"exact"}],"termid":"MOD:00200"}


id: PBO:0083121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichol kinase; catalyzes the terminal step in dolichyl monophosphate (Dol-P) biosynthesis; required for viability and for normal rates of lipid intermediate synthesis and protein N-glycosylation","termid":"PBO:0083121"}


id: GO:0001223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription coactivator, a protein involved in positive regulation of transcription via protein-protein interactions with transcription factors and other proteins that positively regulate transcription. Transcription coactivators do not bind DNA directly, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coregulator binding","termid":"GO:0001221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"transcription coactivator binding","secondary_identifiers":["GO:0001225"],"synonyms":[{"name":"RNA polymerase II transcription coactivator binding","type":"related"}],"termid":"GO:0001223"}


id: PBO:0061870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one cut homeobox 2","termid":"PBO:0061870"}


id: PBO:0108551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone for translation factor EF2, armadillo-type fold, Hgh1","termid":"PBO:0108551"}


id: GO:0098999
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of endosome membrane","termid":"GO:0031313"},{"relation_name":"part_of","term_name":"postsynaptic endosome membrane","termid":"GO:0098895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of postsynaptic endosome membrane","termid":"GO:0098999"}


id: MONDO:0013613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the KCNJ13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 16","secondary_identifiers":["ICD10CM:H35.5","DOID:0110118","GARD:10885","MEDGEN:481692","OMIM:614186","UMLS:C3280062"],"synonyms":[{"name":"KCNJ13 Leber congenital amaurosis","type":"exact"},{"name":"LCA16","type":"exact"},{"name":"Leber congenital amaurosis 16","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in KCNJ13","type":"exact"},{"name":"Leber congenital amaurosis type 16","type":"exact"}],"termid":"MONDO:0013613","xrefs":{"Monarch":{"xref_id":"0013613"}}}


id: PBO:0075896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 antisense RNA 2","termid":"PBO:0075896"}


id: PBO:0047658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 9 pseudogene 1","termid":"PBO:0047658"}


id: FYPO:0005100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(U) polymerase activity (EC name RNA uridylyltransferase activity) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal poly(U) polymerase activity","synonyms":[{"name":"normal PUP activity","type":"exact"},{"name":"normal RNA uridylyltransferase activity","type":"exact"}],"termid":"FYPO:0005100"}


id: PBO:0084467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKK involved in the protein kinase C signaling pathway; involved in control of cell integrity; upon activation by Bck1p phosphorylates downstream target, Slt2p; functionally redundant with Mkk1p; MKK2 has a paralog, MKK1, that arose from the whole genome duplication","termid":"PBO:0084467"}


id: MONDO:0008007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dental ankylosis is a rare disorder characterized by the fusion of the tooth to the bone, preventing both eruption and orthodontic movement.","definition_xrefs":["Orphanet:1077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"},{"relation_name":"is_a","term_name":"ankylosis","termid":"MONDO:0002257"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth ankylosis","secondary_identifiers":["GARD:701","ICD10CM:K03.5","icd11.foundation:2066427602","MedDRA:10044019","MEDGEN:57843","ICD9:521.6","MESH:D020254","DOID:12661","SCTID:14901003","UMLS:C0155930","OMIM:157950"],"synonyms":[{"name":"abnormal fusion of dental cementum with alveolar bone","type":"related"},{"name":"ankylosis (disease) of calcareous tooth","type":"exact"},{"name":"ankylosis of teeth","type":"exact"},{"name":"ankylosis of tooth","type":"exact"},{"name":"calcareous tooth ankylosis (disease)","type":"exact"},{"name":"dental ankylosis","type":"related"},{"name":"molar 1 reinclusion","type":"related"},{"name":"molar I reinclusion","type":"related"},{"name":"permanent molars, secondary retention OF","type":"related"},{"name":"secondary retention of permanent molars","type":"related"}],"termid":"MONDO:0008007","xrefs":{"Monarch":{"xref_id":"0008007"}}}


id: SO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Bel-Pao superfamily are similar to LTRs in the Gypsy and Retrovirus superfamilies. Mainly described in metazoan genomes, this superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH and INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bel_Pao_LTR_retrotransposon","synonyms":[{"name":"Bel Pao LTR retrotransposon","type":"exact"},{"name":"Bel-Pao LTR retrotransposon","type":"exact"},{"name":"RLB retrotransposon","type":"exact"}],"termid":"SO:0002266"}


id: MONDO:0022403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by galactorrhea and amenorrhea with symptoms of estrogenic insufficiency and absence of urinary gonadotropins.","definition_xrefs":["PMID:13022752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ahumada Del Castillo syndrome","synonyms":[{"name":"Argonz Ahumada Del Castillo syndrome","type":"related"},{"name":"Argonz Del Castillo syndrome","type":"related"},{"name":"amenorrhea galactorrhea FSH decrease syndrome","type":"related"},{"name":"galactorrhea amenorrhea without pregnancy","type":"related"},{"name":"nonpuerperal galactorrhe amenorrhea","type":"related"}],"termid":"MONDO:0022403","xrefs":{"Monarch":{"xref_id":"0022403"}}}


id: PBO:0114425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 7","termid":"PBO:0114425"}


id: PBO:0028939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_growth","termid":"PBO:0028939"}


id: PBO:0083711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in regulation of OLE1 transcription; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting; MGA2 has a paralog, SPT23, that arose from the whole genome duplication","termid":"PBO:0083711"}


id: PBO:0067130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 177, pseudogene","termid":"PBO:0067130"}


id: PBO:0066287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member M, pseudogene","termid":"PBO:0066287"}


id: PBO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase Pub2","termid":"PBO:0001735"}


id: PBO:0047525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen alpha chain","termid":"PBO:0047525"}


id: MONDO:1011754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive perforating collagenosis, non-human animal","secondary_identifiers":["OMIA:001476"],"termid":"MONDO:1011754","xrefs":{"Monarch":{"xref_id":"1011754"}}}


id: PBO:0071574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 3","termid":"PBO:0071574"}


id: GO:0016092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"prenol catabolic process","synonyms":[{"name":"prenol breakdown","type":"exact"},{"name":"prenol catabolism","type":"exact"},{"name":"prenol degradation","type":"exact"}],"termid":"GO:0016092"}


id: GO:1901640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to XTP.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate binding","termid":"GO:0035639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"XTP binding","termid":"GO:1901640"}


id: GO:0043609
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71904],"is_not":false,"summary":null,"term":"GO:0043609"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of carbon utilization.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"carbon utilization","termid":"GO:0015976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of carbon utilization","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0043609","terms_by_termid":{"GO:0043609":null}}


id: MONDO:1011763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal acrodermatitis, non-human animal","secondary_identifiers":["OMIA:002146"],"termid":"MONDO:1011763","xrefs":{"Monarch":{"xref_id":"1011763"}}}


id: GO:0098621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phosphoseryl-tRNA(Sec) + selenophosphoric acid + H2O => L-selenocysteinyl-tRNA(Sec) + 2 phosphoric acid.","definition_xrefs":["PMID:17142313","PMID:19608919","RHEA:25041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenotransferase activity","termid":"GO:0016785"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"O-phosphoseryl-tRNA(Sec) selenium transferase activity","secondary_identifiers":["EC:2.9.1.2","Reactome:R-HSA-2408555"],"synonyms":[{"name":"O-phospho-L-seryl-tRNA(Sec):L-selenocysteinyl-tRNA synthase","type":"exact"},{"name":"O-phosphoseryl-tRNA:selenocysteinyl-tRNA synthase","type":"exact"},{"name":"SepSecS","type":"exact"},{"name":"phosphoseryl-selenocysteinyl-tRNA selenium transferase activity","type":"exact"}],"termid":"GO:0098621"}


id: PBO:0013769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EXOC1","termid":"PBO:0013769"}


id: PBO:0045952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 8","termid":"PBO:0045952"}


id: PR:Q10205
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP43 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03662","PRO:DNx","PANTHER:PTHR11097:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.03c","secondary_identifiers":["UniProtKB:Q10205"],"synonyms":[{"name":"Spom972h-EXOSC8","type":"exact"},{"name":"ribosomal RNA-processing protein 43 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10205"}


id: GO:0031035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"myosin filament disassembly","synonyms":[{"name":"myosin depolymerization","type":"related"}],"termid":"GO:0031035"}


id: RO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c executes activity in d if and only if c enables p and p occurs_in d.  Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure.","definition_xrefs":["GOC:dos","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_active_in","synonyms":[{"name":"enables activity in","type":"exact"}],"termid":"RO:0002432"}


id: MONDO:0004305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parathyroid gland adenoma composed predominantly or entirely of neoplastic cells with abundant granular eosinophilic cytoplasm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oncocytic adenoma","termid":"MONDO:0003424"},{"relation_name":"is_a","term_name":"parathyroid gland adenoma","termid":"MONDO:0006890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid oncocytic adenoma","secondary_identifiers":["UMLS:C1335351","NCIT:C27393","DOID:7611","MEDGEN:233845"],"synonyms":[{"name":"parathyroid gland oncocytic adenoma","type":"exact"},{"name":"parathyroid oncocytic adenoma","type":"exact"}],"termid":"MONDO:0004305","xrefs":{"Monarch":{"xref_id":"0004305"}}}


id: GO:1903557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tumor necrosis factor superfamily cytokine production.","definition_xrefs":["PMID:24187568","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"positively_regulates","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"activation of TNF superfamily production","type":"related"},{"name":"activation of TNFSF cytokine production","type":"narrow"},{"name":"activation of tumor necrosis factor superfamily cytokine production","type":"narrow"},{"name":"positive regulation of TNF superfamily production","type":"related"},{"name":"positive regulation of TNFSF cytokine production","type":"exact"},{"name":"up regulation of TNF superfamily production","type":"related"},{"name":"up regulation of TNFSF cytokine production","type":"exact"},{"name":"up regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"up-regulation of TNF superfamily production","type":"related"},{"name":"up-regulation of TNFSF cytokine production","type":"exact"},{"name":"up-regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"upregulation of TNF superfamily production","type":"related"},{"name":"upregulation of TNFSF cytokine production","type":"exact"},{"name":"upregulation of tumor necrosis factor superfamily cytokine production","type":"exact"}],"termid":"GO:1903557"}


id: MONDO:0043179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piepkorn karp hickok syndrome","secondary_identifiers":["UMLS:C2931016","MESH:C535774","MEDGEN:418962"],"synonyms":[{"name":"short ribs, polysyndactyly, cranial synostosis, cleft palate cardiovascular and urogenital anomalies and severe ossification defect","type":"related"}],"termid":"MONDO:0043179","xrefs":{"Monarch":{"xref_id":"0043179"}}}


id: PBO:0062108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 6","termid":"PBO:0062108"}


id: MONDO:0021421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete carcinoid tumors, intestina (obsolete MONDO:0021421)","termid":"MONDO:0021421","xrefs":{"Monarch":{"xref_id":"0021421"}}}


id: MONDO:0008078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis type 1","termid":"MONDO:0018975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis, familial spinal","secondary_identifiers":["MESH:C563523","UMLS:C1834235","DOID:0070482","OMIM:162210","MEDGEN:320296"],"synonyms":[{"name":"Fsnf","type":"related"},{"name":"neurofibromatosis, familial spinal","type":"exact"}],"termid":"MONDO:0008078","xrefs":{"Monarch":{"xref_id":"0008078"}}}


id: PBO:0030207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell","termid":"PBO:0030207"}


id: GO:0052173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of another organism.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defenses of other organism (obsolete GO:0052173)","synonyms":[{"name":"response to defenses of other organism during symbiotic interaction","type":"related"},{"name":"response to defenses of other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052173"}


id: GO:0150202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transport across blood-brain barrier.","definition_xrefs":["PMID:29377008","GOC:bc","PMID:30280653","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"negatively_regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"},{"relation_name":"part_of","term_name":"negative regulation of vascular permeability","termid":"GO:0043116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of transport across blood-brain barrier","termid":"GO:0150202"}


id: MONDO:0005513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methylmalonic aciduria and homocystinuria type cblE (obsolete MONDO:0005513)","termid":"MONDO:0005513","xrefs":{"Monarch":{"xref_id":"0005513"}}}


id: MONDO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated iridoschisis","secondary_identifiers":["GARD:22125","icd11.foundation:1870961422","Orphanet:519392","UMLS:C0154919","MEDGEN:509720"],"termid":"MONDO:0033810","xrefs":{"Monarch":{"xref_id":"0033810"}}}


id: PBO:0068750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 5, pseudogene","termid":"PBO:0068750"}


id: PBO:0063838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase inhibitor 3","termid":"PBO:0063838"}


id: PATO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000472 quality value (obsolete PATO:0000472)","termid":"PATO:0000472"}


id: GO:0036138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-histidine to form peptidyl-hydroxyhistidine.","definition_xrefs":["GOC:reh","PMID:21251231"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-histidine hydroxylation (obsolete GO:0036138)","termid":"GO:0036138"}


id: PBO:0040198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 11","termid":"PBO:0040198"}


id: PATO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being roundish, flattish shape, possibly with a slightly angled edge.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flat","termid":"PATO:0000407"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelike","synonyms":[{"name":"plate-like","type":"exact"}],"termid":"PATO:0002253"}


id: MONDO:0700049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious disease, non-human animal","termid":"MONDO:0700049","xrefs":{"Monarch":{"xref_id":"0700049"}}}


id: PBO:0084595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL017W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YJL016W","termid":"PBO:0084595"}


id: GO:1904191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of cyclin-dependent protein serine/threonine kinase activity that is involved in meiotic nuclear division.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:15791259"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in meiotic nuclear division (obsolete GO:1904191)","synonyms":[{"name":"activation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"narrow"},{"name":"positive regulation of CDK activity involved in meiotic nuclear division","type":"exact"},{"name":"positive regulation of cyclin-dependent protein kinase activity involved in meiosis","type":"broad"},{"name":"stimulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"narrow"},{"name":"up regulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"},{"name":"up-regulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"},{"name":"upregulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"}],"termid":"GO:1904191"}


id: PBO:0024808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-colocalizes_with","termid":"PBO:0024808"}


id: PBO:0091235
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.101871_101872insG","termid":"PBO:0091235"}


id: PBO:0071538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 3","termid":"PBO:0071538"}


id: PBO:0086289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in determining mitochondrial architecture; inner membrane protein that interacts physically and genetically with the MICOS complex and is required for its integrity","termid":"PBO:0086289"}


id: PBO:0052011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 1C","termid":"PBO:0052011"}


id: PBO:0043696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 2","termid":"PBO:0043696"}


id: PBO:0056827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase-glucoamylase","termid":"PBO:0056827"}


id: GO:0004735
data:
  {"annotated_genes":["SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79754],"is_not":false,"summary":null,"term":"GO:0004735"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+.","definition_xrefs":["EC:1.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70664","MetaCyc:PYRROLINECARBREDUCT-RXN","Reactome:R-HSA-6783955","Reactome:R-HSA-6783939","RHEA:14109"],"synonyms":[{"name":"1-pyrroline-5-carboxylate reductase activity","type":"related"},{"name":"L-proline oxidase activity","type":"related"},{"name":"L-proline-NAD(P)+ 5-oxidoreductase activity","type":"related"},{"name":"L-proline:NAD(P)+ 5-oxidoreductase activity","type":"related"},{"name":"NADPH-L-delta1-pyrroline carboxylic acid reductase activity","type":"related"},{"name":"P5CR activity","type":"related"}],"termid":"GO:0004735","terms_by_termid":{"GO:0004735":null}}


id: PBO:0057309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516b-2","termid":"PBO:0057309"}


id: PBO:0068353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 133","termid":"PBO:0068353"}


id: GO:0090671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which telomerase RNA (TERC) is transported to, or maintained in, a Cajal body.","definition_xrefs":["GOC:BHF","PMID:25467444","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization to Cajal body","termid":"GO:0090670"},{"relation_name":"is_a","term_name":"telomerase RNA localization","termid":"GO:0090672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"telomerase RNA localization to Cajal body","termid":"GO:0090671"}


id: PBO:0085737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription-coupled nucleotide excision repair; repairs UV-induced DNA lesions; recruitment to DNA lesions is dependent on an elongating RNA polymerase II; homolog of human CSB protein","termid":"PBO:0085737"}


id: MONDO:0014345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the KIZ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"KIZ-related retinopathy","termid":"MONDO:0700232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 69","secondary_identifiers":["MEDGEN:862749","DOID:0110410","GARD:16011","ICD10CM:H35.5","OMIM:615780","UMLS:C4014312"],"synonyms":[{"name":"KIZ retinitis pigmentosa","type":"exact"},{"name":"RP69","type":"exact"},{"name":"retinitis pigmentosa 69","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in KIZ","type":"exact"},{"name":"retinitis pigmentosa type 69","type":"exact"}],"termid":"MONDO:0014345","xrefs":{"Monarch":{"xref_id":"0014345"}}}


id: PBO:0084538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; role in misfolded protein quality control; forms a heterotrimeric complex with Erp1, Erp2p, and Emp24,","termid":"PBO:0084538"}


id: MONDO:0004421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast papilloma characterized by the presence of predominant sclerosing architectural features.","definition_xrefs":["NCIT:C27944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papilloma","termid":"MONDO:0021097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosing breast papilloma","secondary_identifiers":["DOID:7984","UMLS:C1335932","MEDGEN:233436"],"synonyms":[{"name":"Complex sclerosing papillary lesion","type":"exact"},{"name":"Complex sclerosing papillary lesion of the breast","type":"exact"},{"name":"sclerosing breast papilloma","type":"exact"}],"termid":"MONDO:0004421","xrefs":{"Monarch":{"xref_id":"0004421"}}}


id: GO:0170053
data:
  {"annotated_genes":["SJAG_01076","SJAG_04682","SJAG_05212","SJAG_00686"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140656"},{"annotations":[106885,91649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044692"},{"annotations":[79715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061632"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a nuclease.","definition_xrefs":["PMID:24736845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_01076":null,"SJAG_04682":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"nuclease activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0170053","terms_by_termid":{"GO:0044692":null,"GO:0061632":null,"GO:0140656":null}}


id: PR:Q10347
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- any2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.05","synonyms":[{"name":"Spom972h-any2","type":"exact"}],"termid":"PR:Q10347"}


id: GO:0009158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside monophosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate catabolic process","termid":"GO:0009125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside monophosphate catabolic process","synonyms":[{"name":"ribonucleoside monophosphate breakdown","type":"exact"},{"name":"ribonucleoside monophosphate catabolism","type":"exact"},{"name":"ribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009158"}


id: GO:0003918
data:
  {"annotated_genes":["SJAG_05295","SJAG_03567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70235,73639],"is_not":false,"summary":null,"term":"GO:0003918"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined, driven by ATP hydrolysis. The enzyme changes the linking number in multiples of 2.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03567":null,"SJAG_05295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:5.6.2.2","GO:0061505","MetaCyc:5.99.1.3-RXN","Wikipedia:Type_II_topoisomerase"],"synonyms":[{"name":"DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"DNA topoisomerase II","type":"narrow"},{"name":"DNA topoisomerase II activity","type":"narrow"},{"name":"DNA topoisomerase IV activity","type":"narrow"},{"name":"DNA topoisomerase type II activity","type":"exact"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"deoxyribonucleic topoisomerase activity","type":"broad"},{"name":"topoisomerase","type":"broad"},{"name":"topoisomerase II","type":"narrow"},{"name":"type II DNA topoisomerase activity","type":"related"}],"termid":"GO:0003918","terms_by_termid":{"GO:0003918":null}}


id: GO:0003266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardioblast proliferation in the second heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. The secondary heart field is the region of the heart that will form the majority of the mesodermal component of the right ventricle, the arterial pole (outflow tract) and the venous pole (inflow tract).","definition_xrefs":["GOC:mtg_heart","GOC:rl","PMID:17276708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast proliferation","termid":"GO:0003264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"regulation of SHF cardioblast proliferation","type":"exact"},{"name":"regulation of second heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003266"}


id: MONDO:0017883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multilocular cystic clear cell renal cell neoplasm of low malignant potential (obsolete MONDO:0017883)","termid":"MONDO:0017883","xrefs":{"Monarch":{"xref_id":"0017883"}}}


id: PBO:0034401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dependent_on_(obsolete_dependent_on)","termid":"PBO:0034401"}


id: PBO:0053733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 954","termid":"PBO:0053733"}


id: PBO:0090153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytochrome c-heme linkage protein Cyc2","termid":"PBO:0090153"}


id: PR:O94303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his4 gene.","definition_xrefs":["UniProtKB:O94303","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazole glycerol phosphate synthase hisHF (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC418.01c","synonyms":[{"name":"IGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IGPS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ImGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-his4","type":"exact"}],"termid":"PR:O94303"}


id: MONDO:0012764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disease characterized by increased radiosensitivity, immunodeficiency, mild motor control and learning difficulties, facial dysmorphism, and short stature that has material basis in homozygous or compound heterozygous mutation in the RNF168 gene on chromosome 3q29.","definition_xrefs":["DOID:0090113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"RIDDLE syndrome","secondary_identifiers":["MEDGEN:394368","Orphanet:420741","UMLS:C2677792","GARD:17701","NANDO:1200336","NANDO:2200710","MESH:C567453","OMIM:611943"],"synonyms":[{"name":"RIDDLE syndrome","type":"exact"},{"name":"RNF168 deficiency","type":"exact"},{"name":"radiosensitivity, immunodeficiency, dysmorphic features, and learning difficulties","type":"related"},{"name":"radiosensitivity-immunodeficiency-dysmorphic features-learning difficulties syndrome","type":"exact"}],"termid":"MONDO:0012764","xrefs":{"Monarch":{"xref_id":"0012764"}}}


id: GO:0003140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the lateral mesoderm with respect to the left and right halves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"lateral mesoderm development","termid":"GO:0048368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of left/right asymmetry in lateral mesoderm","termid":"GO:0003140"}


id: PBO:0077006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 8","termid":"PBO:0077006"}


id: MONDO:1010662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombocytopenia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, non-human animal","termid":"MONDO:1010080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, cattle","secondary_identifiers":["OMIA:001001-9913"],"termid":"MONDO:1010662","xrefs":{"Monarch":{"xref_id":"1010662"}}}


id: GO:0010238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a proline stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to proline","termid":"GO:0010238"}


id: PBO:0063269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 15","termid":"PBO:0063269"}


id: PBO:0072667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 receptor like 2","termid":"PBO:0072667"}


id: GO:1902278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic amylase secretion.","definition_xrefs":["GOC:jc","GOC:TermGenie","PMID:19028687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of pancreatic amylase secretion","termid":"GO:1902276"},{"relation_name":"positively_regulates","term_name":"pancreatic amylase secretion","termid":"GO:0036395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic amylase secretion","synonyms":[{"name":"activation of pancreatic amylase secretion","type":"narrow"},{"name":"up regulation of pancreatic amylase secretion","type":"exact"},{"name":"up-regulation of pancreatic amylase secretion","type":"exact"},{"name":"upregulation of pancreatic amylase secretion","type":"exact"}],"termid":"GO:1902278"}


id: GO:0018321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a protein by amino acid glucuronylation, the addition of a glucuronate group, the uronic acid derived from glucose.","definition_xrefs":["GOC:pr","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein glucuronylation (obsolete GO:0018321)","synonyms":[{"name":"protein amino acid glucuronylation","type":"exact"}],"termid":"GO:0018321"}


id: PBO:0063513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 1 pseudogene 2","termid":"PBO:0063513"}


id: FYECO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which SDS (sodium dodecyl sulfate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ SDS","synonyms":[{"name":"sodium dodecyl sulfate added","type":"exact"}],"termid":"FYECO:0000167"}


id: GO:0061085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K27 methylation (obsolete GO:0061085)","termid":"GO:0061085"}


id: MONDO:0032826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 21","secondary_identifiers":["UMLS:C5231498","MEDGEN:1684676","OMIM:618594","DOID:0112267"],"synonyms":[{"name":"NEPHROTIC SYNDROME, TYPE 21","type":"related"},{"name":"NPHS21","type":"related"}],"termid":"MONDO:0032826","xrefs":{"Monarch":{"xref_id":"0032826"}}}


id: MONDO:0002780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0002780 (obsolete MONDO:0002780)","termid":"MONDO:0002780","xrefs":{"Monarch":{"xref_id":"0002780"}}}


id: MONDO:0009001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macular coloboma-cleft palate-hallux valgus syndrome is characterized by the association of bilateral macular coloboma, cleft palate, and hallux valgus. It has been described in a brother and sister. Pelvic, limb and digital anomalies were also reported. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:91494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular coloboma-cleft palate-hallux valgus syndrome","secondary_identifiers":["SCTID:722463001","GARD:16802","MEDGEN:341812","OMIM:216800","UMLS:C1857619","MESH:C565686"],"synonyms":[{"name":"coloboma of macula and skeletal anomalies","type":"related"}],"termid":"MONDO:0009001","xrefs":{"Monarch":{"xref_id":"0009001"}}}


id: MONDO:0024257
data:
  {"annotated_genes":["SJAG_03328","SJAG_02695","SJAG_00853","SJAG_02399","SJAG_01260","SJAG_00754","SJAG_03894","SJAG_03923","SJAG_03598","SJAG_04321","SJAG_01352","SJAG_07000","SJAG_04387","SJAG_02242","SJAG_02509","SJAG_00459","SJAG_03106","SJAG_02289","SJAG_02286","SJAG_04489","SJAG_03495","SJAG_00668","SJAG_04907","SJAG_01317","SJAG_01848","SJAG_02919","SJAG_01522","SJAG_04178","SJAG_03170","SJAG_04084","SJAG_00237","SJAG_05289","SJAG_00053","SJAG_02096","SJAG_03345","SJAG_03815","SJAG_04567","SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88640,88639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008453"},{"annotations":[88508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[89223,87160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[88703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[88821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[87566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[87314,87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[88434,88433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[88564,88563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[87762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008026"},{"annotations":[87174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011436"},{"annotations":[87058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011585"},{"annotations":[88668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[87241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[87092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[88961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[88911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971150"},{"annotations":[87263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030055"},{"annotations":[88249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957874"},{"annotations":[87936,87937,87938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[88551,88553,88552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[88233,88232,88234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[87237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[88088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[87613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[88113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[87138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"},{"annotations":[88229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[88526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[89016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[89020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[88834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[88011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"},{"annotations":[87721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014806"},{"annotations":[87720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014807"},{"annotations":[87791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859279"},{"annotations":[88106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009669"},{"annotations":[88362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009673"},{"annotations":[87968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009672"},{"annotations":[88128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010056"},{"annotations":[89213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[88195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010338"}]},"cv_name":"mondo","definition":"An instance of motor neuron disease that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron disorder","termid":"MONDO:0020128"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"hereditary neuromuscular 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disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19478","Orphanet:98505","UMLS:C0270763","SCTID:49793008","MEDGEN:78728"],"synonyms":[{"name":"genetic anterior horn cell disease","type":"exact"},{"name":"genetic motor neuron disease","type":"exact"},{"name":"hereditary motor neuron disease","type":"exact"}],"termid":"MONDO:0024257","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008025":null,"MONDO:0008026":null,"MONDO:0008453":null,"MONDO:0008458":null,"MONDO:0009669":null,"MONDO:0009672":null,"MONDO:0009673":null,"MONDO:0010043":null,"MONDO:0010056":null,"MONDO:0010190":null,"MONDO:0010338":null,"MONDO:0010459":null,"MONDO:0010532":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0011436":null,"MONDO:0011585":null,"MONDO:0011879":null,"MONDO:0012077":null,"MONDO:0012080":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0012945":null,"MONDO:0013243":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0013853":null,"MONDO:0013884":null,"MONDO:0014485":null,"MONDO:0014531":null,"MONDO:0014806":null,"MONDO:0014807":null,"MONDO:0014874":null,"MONDO:0015353":null,"MONDO:0030055":null,"MONDO:0030860":null,"MONDO:0060585":null,"MONDO:0859279":null,"MONDO:0859529":null,"MONDO:0957874":null,"MONDO:0971150":null},"xrefs":{"Monarch":{"xref_id":"0024257"}}}


id: PR:Q10110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase I-specific transcription initiation factor RRN3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00921","PRO:DNx","PANTHER:PTHR12790:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.11c","secondary_identifiers":["UniProtKB:Q10110"],"synonyms":[{"name":"Spom972h-RRN3","type":"exact"}],"termid":"PR:Q10110"}


id: MONDO:0016301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenitally corrected transposition (CCT) of the great vessels is a rare cardiac malformation characterized by the combination of discordant atrioventricular and ventriculo-arterial connections, usually accompanied by other cardiovascular malformations.","definition_xrefs":["Orphanet:216694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposition of the great arteries","termid":"MONDO:0000153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenitally corrected transposition of the great arteries","secondary_identifiers":["NANDO:2100079","NCIT:C98902","UMLS:C0344616","NANDO:1200703","NANDO:1200701","MEDGEN:87489","ICD9:745.12","icd11.foundation:254915185","MESH:D000080041","NANDO:1200699","MedDRA:10011120","NANDO:2200259","SCTID:83799000","GARD:1544"],"synonyms":[{"name":"Double discordance","type":"exact"},{"name":"L-transposition of the great arteries","type":"exact"},{"name":"L-transposition of the great vessels","type":"exact"},{"name":"congenitally corrected transposition of the great vessels","type":"exact"},{"name":"discordant ventriculoarterial and atrioventricular connections","type":"exact"},{"name":"levo-transposition of the great arteries","type":"exact"},{"name":"levo-transposition of the great vessels","type":"exact"},{"name":"transposition of the great arteries, congenitally corrected","type":"related"},{"name":"transposition of the great vessels, congenitally corrected","type":"related"},{"name":"ventricular inversion","type":"exact"},{"name":"ventriculoarterial and atrioventricular discordance","type":"exact"}],"termid":"MONDO:0016301","xrefs":{"Monarch":{"xref_id":"0016301"}}}


id: GO:0044836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic enzymatic conversion of D-xylose to ethanol, yielding energy in the form of ATP.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete D-xylose fermentation (obsolete GO:0044836)","termid":"GO:0044836"}


id: GO:0036227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mitotic cell cycle is halted during G2 phase as a result of deprivation of glucose.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:958201","GOC:mah","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle","termid":"GO:0051726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic G2 cell cycle arrest in response to glucose starvation","termid":"GO:0036227"}


id: PBO:0034651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0034651"}


id: GO:0047317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 3-amino-6-acetamidohexanoate = L-glutamate + 3-oxo-6-acetamidohexanoate.","definition_xrefs":["EC:2.6.1.65","MetaCyc:2.6.1.65-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"N6-acetyl-beta-lysine transaminase activity","secondary_identifiers":["RHEA:16889"],"synonyms":[{"name":"6-acetamido-3-aminohexanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N(6)-acetyl-beta-lysine aminotransferase activity","type":"related"},{"name":"N6-acetyl-beta-lysine aminotransferase activity","type":"exact"},{"name":"epsilon-acetyl-beta-lysine aminotransferase activity","type":"related"}],"termid":"GO:0047317"}


id: GO:0070277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways by which iodide is converted to diiodine, with the concomitant loss of electrons.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete iodide oxidation (obsolete GO:0070277)","termid":"GO:0070277"}


id: PBO:0050329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 31","termid":"PBO:0050329"}


id: MONDO:0016327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial disease with hypertrophic cardiomyopathy (obsolete MONDO:0016327)","secondary_identifiers":["Orphanet:217587"],"termid":"MONDO:0016327","xrefs":{"Monarch":{"xref_id":"0016327"}}}


id: PBO:0067006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 12, pseudogene","termid":"PBO:0067006"}


id: PBO:0072637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1 pseudogene 3","termid":"PBO:0072637"}


id: PBO:0078191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-1","termid":"PBO:0078191"}


id: PBO:0059852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 5","termid":"PBO:0059852"}


id: PBO:0030389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_nuclear_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030389"}


id: PBO:0045986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 autophagy associated transmembrane protein","termid":"PBO:0045986"}


id: GO:0060514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of the urogenital sinus mesenchyme and the urogenital sinus epithelium that causes the cells of the urogenital sinus epithelium to change their fates and specify the development of the prostate gland.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ induction","termid":"GO:0001759"},{"relation_name":"is_a","term_name":"regulation of prostatic bud formation","termid":"GO:0060685"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"prostate field specification","termid":"GO:0060515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate induction","termid":"GO:0060514"}


id: MONDO:0011073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"transient neonatal diabetes mellitus","termid":"MONDO:0020525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0005015"],"is_obsolete":false,"name":"diabetes mellitus, transient neonatal, 1","secondary_identifiers":["UMLS:C1832386","GARD:1839","Orphanet:99886","OMIM:601410","MESH:C563322","SCTID:609579009","MEDGEN:371317"],"synonyms":[{"name":"Dmtn","type":"related"},{"name":"Tndm","type":"related"},{"name":"Tndm1","type":"related"},{"name":"diabetes mellitus, transient neonatal 1","type":"exact"},{"name":"diabetes mellitus, transient neonatal, 1","type":"exact"},{"name":"diabetes mellitus, transient neonatal, type 1","type":"exact"}],"termid":"MONDO:0011073","xrefs":{"Monarch":{"xref_id":"0011073"}}}


id: PBO:0067455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 580, pseudogene","termid":"PBO:0067455"}


id: GO:2000570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 2 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell activation","termid":"GO:2000569"},{"relation_name":"positively_regulates","term_name":"T-helper 2 cell activation","termid":"GO:0035712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 2 cell activation","synonyms":[{"name":"positive regulation of Th2 cell activation","type":"exact"}],"termid":"GO:2000570"}


id: GO:1903967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a micafungin stimulus.","definition_xrefs":["PMID:16928959","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to micafungin","termid":"GO:1903967"}


id: GO:0015100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of vanadium (V) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"vanadium ion transmembrane transporter activity","termid":"GO:0015100"}


id: PBO:0071102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 104","termid":"PBO:0071102"}


id: PBO:0068686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 67, pseudogene","termid":"PBO:0068686"}


id: GO:0047260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-D-glucose + glucose-6-phosphate = alpha,alpha-trehalose 6-phosphate + GDP.","definition_xrefs":["MetaCyc:2.4.1.36-RXN","EC:2.4.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (GDP-forming) activity","secondary_identifiers":["RHEA:14605"],"synonyms":[{"name":"GDP-glucose-glucosephosphate glucosyltransferase activity","type":"related"},{"name":"GDP-glucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"GDPglucose-glucose-phosphate glucosyltransferase activity","type":"related"},{"name":"GDPglucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"guanosine diphosphoglucose-glucose phosphate glucosyltransferase activity","type":"related"},{"name":"trehalose phosphate synthase (GDP-forming) activity","type":"related"}],"termid":"GO:0047260"}


id: PBO:0034224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_plesiomorphy_relationship_with","termid":"PBO:0034224"}


id: GO:0044693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: trehalose(out) + H+(out) = trehalose(in) + H+(in).","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"trehalose:proton symporter activity","synonyms":[{"name":"trehalose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0044693"}


id: PBO:0064145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX/knotted 1 homeobox 2","termid":"PBO:0064145"}


id: MONDO:0858992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive spastic paraplegia type 87 (obsolete MONDO:0858992)","termid":"MONDO:0858992","xrefs":{"Monarch":{"xref_id":"0858992"}}}


id: PBO:0058385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4757","termid":"PBO:0058385"}


id: MONDO:0008061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hereditary patellar dysostosis characterized by nail hypoplasia or aplasia, aplastic or hypoplastic patellae, elbow dysplasia, and the presence of iliac horns as well as renal and ocular anomalies.","definition_xrefs":["Orphanet:2614"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary glomerular disease (obsolete MONDO:0015163)","termid":"MONDO:0015163"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"nail-patella syndrome","secondary_identifiers":["OMIM:161200","icd11.foundation:1121867410","NANDO:1200967","DOID:9467","NORD:1488","MedDRA:10063431","SCTID:22199006","MEDGEN:10257","NCIT:C75120","MESH:D009261","ICD9:759.89","NANDO:2200132","UMLS:C0027341","GARD:7160"],"synonyms":[{"name":"Fong disease","type":"exact"},{"name":"NPS","type":"related"},{"name":"NPS 1","type":"exact"},{"name":"NPS1","type":"exact"},{"name":"Nail Patella Syndrome","type":"exact"},{"name":"Turner-Kieser syndrome","type":"exact"},{"name":"Turner-Kiser syndrome","type":"exact"},{"name":"arthro-onychodysplasia","type":"related"},{"name":"hereditary Osteo-onychodysplasia","type":"exact"},{"name":"hereditary onychoostedysplasia","type":"exact"},{"name":"iliac horn syndrome","type":"exact"},{"name":"nail patella syndrome","type":"exact"},{"name":"nail-patella syndrome","type":"exact"},{"name":"onychoosteodysplasia","type":"exact"},{"name":"osteo-onychodysplasia","type":"exact"}],"termid":"MONDO:0008061","xrefs":{"Monarch":{"xref_id":"0008061"}}}


id: GO:0007189
data:
  {"annotated_genes":["SJAG_01754","SJAG_03081","SJAG_00574","SJAG_02481","SJAG_01254","SJAG_00472","SJAG_01245","SJAG_01699","SJAG_04312","SJAG_00266","SJAG_04026","SJAG_02311","SJAG_02444","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108466,118562,107869,96174,111502,110992,108816,117532,103805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010619"},{"annotations":[118378,102398,109945,94038,94698],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of adenylyl cyclase activity which results in an increase in the intracellular concentration of cyclic AMP (cAMP). This pathway is negatively regulated by phosphodiesterase, which cleaves cAMP and terminates the signaling.","definition_xrefs":["ISBN:0815316194","GOC:dph","GOC:mah","GOC:signaling","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-modulating G protein-coupled receptor signaling pathway","termid":"GO:0007188"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010580","Reactome:R-HSA-170660","GO:0010579"],"synonyms":[{"name":"G protein signaling, adenylate cyclase activating pathway","type":"exact"},{"name":"G protein signaling, adenylyl cyclase activating pathway","type":"exact"},{"name":"G protein signalling, adenylate cyclase activating pathway","type":"exact"},{"name":"G protein signalling, adenylyl cyclase activating pathway","type":"exact"},{"name":"G-protein signaling, adenylate cyclase activating pathway","type":"exact"},{"name":"G-protein signaling, adenylyl cyclase activating pathway","type":"exact"},{"name":"G-protein signalling, adenylate cyclase activating pathway","type":"exact"},{"name":"G-protein signalling, adenylyl cyclase activating pathway","type":"exact"},{"name":"GPCR signaling pathway via activation of adenylate cyclase","type":"exact"},{"name":"GPCR signaling pathway via activation of adenylate cyclase activity","type":"exact"},{"name":"activation of adenylate cyclase activity by G-protein signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity involved in G-protein signaling","type":"related"},{"name":"adenylate cyclase-activating GPCR signaling pathway","type":"exact"},{"name":"positive regulation of adenylate cyclase activity by G-protein signaling pathway","type":"related"},{"name":"positive regulation of adenylate cyclase activity by G-protein signalling pathway","type":"related"},{"name":"positive regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0007189","terms_by_termid":{"GO:0010619":null,"GO:0110034":null}}


id: PBO:0047984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2","termid":"PBO:0047984"}


id: PBO:0109300
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low codon stabilization coefficient","termid":"PBO:0109300"}


id: PBO:0078315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta constant","termid":"PBO:0078315"}


id: MONDO:0018365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant non-epithelial tumor of ovary","secondary_identifiers":["GARD:21650","UMLS:C5680039","Orphanet:398940","MEDGEN:1843209"],"synonyms":[{"name":"non-epithelial cancer of ovary","type":"exact"},{"name":"ovarian malignant non-epithelial tumor","type":"exact"},{"name":"ovarian malignant non-epithelial tumour","type":"exact"},{"name":"ovarian non-epithelial cancer","type":"exact"}],"termid":"MONDO:0018365","xrefs":{"Monarch":{"xref_id":"0018365"}}}


id: PBO:0120856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGPD4 divergent transcript","termid":"PBO:0120856"}


id: FYPO:0008112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of U6 snRNP complex assembly is abnormal.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal U6 snRNP assembly","termid":"FYPO:0008112"}


id: PBO:0080122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 1","termid":"PBO:0080122"}


id: PBO:0090311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cul8-RING ubiquitin ligase complex WD repeat protein subunit Mms1","termid":"PBO:0090311"}


id: FYPO:0009031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of bleomycin than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to bleomycin","synonyms":[{"name":"resistance to bleomycin during mitotic cell cycle","type":"related"},{"name":"resistance to bleomycin during vegetative growth","type":"exact"},{"name":"resistant to bleomycin","type":"exact"}],"termid":"FYPO:0009031"}


id: PBO:0036007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0036007"}


id: FYPO:0005713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic cytokinesis checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the cytokinesis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle.","definition_xrefs":["PomBase:mah","GO:0044878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis checkpoint","termid":"FYPO:0003830"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished cytokinesis checkpoint","synonyms":[{"name":"abolished cytokinesis checkpoint during mitotic cell cycle","type":"exact"},{"name":"abolished cytokinesis checkpoint during vegetative growth","type":"exact"},{"name":"abolished mitotic cytokinesis checkpoint","type":"exact"}],"termid":"FYPO:0005713"}


id: MONDO:0000508
data:
  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intellectual disability that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00293":null,"SJAG_00379":null,"SJAG_00466":null,"SJAG_00992":null,"SJAG_01047":null,"SJAG_01448":null,"SJAG_01465":null,"SJAG_01540":null,"SJAG_01581":null,"SJAG_01926":null,"SJAG_02165":null,"SJAG_02286":null,"SJAG_02371":null,"SJAG_02523":null,"SJAG_02629":null,"SJAG_02774":null,"SJAG_02855":null,"SJAG_03286":null,"SJAG_03353":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03681":null,"SJAG_03900":null,"SJAG_04056":null,"SJAG_04176":null,"SJAG_04235":null,"SJAG_04631":null,"SJAG_04755":null,"SJAG_04980":null,"SJAG_05239":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"syndromic intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050888","MEDGEN:1842178","UMLS:C5680525"],"synonyms":[{"name":"syndrome associated with intellectual disability","type":"exact"},{"name":"syndromic intellectual 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id: PBO:0071227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 68","termid":"PBO:0071227"}


id: PBO:0069752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1035, pseudogene","termid":"PBO:0069752"}


id: FYPO:0005904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is normal (i.e. indistinguishable from wild type). Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"normal rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0005904"}


id: GO:0097307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to farnesol","termid":"GO:0097307"}


id: MONDO:1010524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, American mink","secondary_identifiers":["OMIA:000197-452646"],"termid":"MONDO:1010524","xrefs":{"Monarch":{"xref_id":"1010524"}}}


id: PBO:0025478
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schindler disease","termid":"PBO:0025478"}


id: GO:0180003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-homocysteine(out) + S-adenosyl-L-methionine(in) = S-adenosyl-L-homocysteine(in) + S-adenosyl-L-methionine(out).","definition_xrefs":["PMID:34375635","PMID:14674884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosyl-L-methionine transmembrane transporter activity","termid":"GO:0000095"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"purine nucleoside transmembrane transporter activity","termid":"GO:0015211"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:S-adenosyl-L-homocysteine antiporter activity","secondary_identifiers":["RHEA:75479"],"termid":"GO:0180003"}


id: PBO:0116478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRR/PPR or ankyrin containing protein","termid":"PBO:0116478"}


id: MONDO:0975867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B-lymphoblastic leukemia with ZNF384 rearrangement","secondary_identifiers":["DOID:0070628"],"termid":"MONDO:0975867","xrefs":{"Monarch":{"xref_id":"0975867"}}}


id: PBO:0089720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase non-catalytic subunit Gcd10","termid":"PBO:0089720"}


id: GO:0018650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: styrene + NADPH + FADH + O2 = NADP+ + FAD+ + H2O + styrene oxide.","definition_xrefs":["UM-BBD_reactionID:r0225"],"gene_count":0,"genotype_count":0,"name":"obsolete styrene monooxygenase activity (obsolete GO:0018650)","termid":"GO:0018650"}


id: PBO:0024876
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Xenopus XMog1","termid":"PBO:0024876"}


id: GO:0030103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of vasopressin from secretory granules into the blood.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"vasopressin secretion","termid":"GO:0030103"}


id: GO:0031346
data:
  {"annotated_genes":["SJAG_03453","SJAG_01794","SJAG_04509","SJAG_00514","SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92793,89840,113358,91817,95423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell projection organization","type":"narrow"},{"name":"positive regulation of cell projection organisation","type":"exact"},{"name":"positive regulation of cell projection organization and biogenesis","type":"related"},{"name":"stimulation of cell projection organization","type":"narrow"},{"name":"up regulation of cell projection organization","type":"exact"},{"name":"up-regulation of cell projection organization","type":"exact"},{"name":"upregulation of cell projection organization","type":"exact"}],"termid":"GO:0031346","terms_by_termid":{"GO:1902917":null}}


id: PBO:0086507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein kinase, potentially phosphorylated by Cdc28p; interacts with ribosome biogenesis factors, Cka2, Gus1 and Arc1; protein abundance increases in response to DNA replication stress","termid":"PBO:0086507"}


id: FYPO:0000654
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"},{"annotations":[121391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a catalytic activity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01458":null,"SJAG_02796":null},"genotype_count":2,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"catalytic activity phenotype","references_by_uniquename":{"PMID:31956022":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01458","SJAG_02796"],"single_locus_genotype_uniquenames":["acb1delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"enzymatic activity phenotype","type":"exact"},{"name":"fission yeast catalytic activity phenotype","type":"exact"}],"termid":"FYPO:0000654","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0000719":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: GO:0018410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the C-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein amino acid modification","synonyms":[{"name":"peptide or protein carboxyl-terminal blocking","type":"related"},{"name":"peptide/protein carboxyl-terminal blocking","type":"related"}],"termid":"GO:0018410"}


id: PBO:0074575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 31","termid":"PBO:0074575"}


id: PBO:0072482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 11","termid":"PBO:0072482"}


id: PBO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic (sorulation) septin Spn6","termid":"PBO:0018179"}


id: GO:0031890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"VIP receptor binding","type":"exact"},{"name":"vasoactive intestinal polypeptide receptor ligand","type":"narrow"}],"termid":"GO:0031890"}


id: FYPO:0007266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum (ER) colocalizes with eisosomes to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:32023460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes","synonyms":[{"name":"decreased colocalization of cortical ER with eisosomes","type":"exact"},{"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes during mitotic cell cycle","type":"related"},{"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes during vegetative growth","type":"exact"},{"name":"decreased colocalization of tubular cortical ER with eisosomes","type":"exact"},{"name":"decreased cortical ER-eisosome colocalization","type":"exact"},{"name":"reduced colocalization of cortical endoplasmic reticulum with eisosomes","type":"exact"}],"termid":"FYPO:0007266"}


id: GO:1900434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:0036170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:1900434"}


id: PBO:0067828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 130","termid":"PBO:0067828"}


id: GO:0045476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a nurse cell. During late oogenesis, following the transfer of substances from the nurse cells to the oocyte, nurse cell remnants are cleared from the egg chamber by apoptotic process.","definition_xrefs":["CL:0000026","GOC:mtg_apoptosis","PMID:11973306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nurse cell apoptotic process","synonyms":[{"name":"apoptosis of nurse cells","type":"exact"},{"name":"invertebrate nurse cell apoptosis","type":"narrow"},{"name":"nurse cell apoptosis","type":"narrow"},{"name":"nurse cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of nurse cells by apoptosis","type":"exact"}],"termid":"GO:0045476"}


id: PR:000027629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated in RxxS motifs by Sid2 family kinases. UniProtKB:Q9P7H1-1, Ser-396/Ser-408/Ser-467/Ser-468/Ser-493/Ser-513, MOD:00046.","definition_xrefs":["PMID:16085489","PomBase:MAH","PMID:18951025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clp1/Phos(S396,S408,S467,S468,S493,S513)","pombase_gene_id":"SPAC1782.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: tyrosine-protein phosphatase Clp1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-CDC14/Phos:1","type":"exact"},{"name":"Spom-clp1/Phos:1","type":"exact"},{"name":"clip1p phosphorylated","type":"related"},{"name":"clp1/Phos(S396,S408,S467,S468,S493,S513)","type":"exact"},{"name":"flp1p phosphorylated","type":"related"},{"name":"tyrosine-protein phosphatase CDC14 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000027629"}


id: GO:0005802
data:
  {"annotated_genes":["SJAG_04340","SJAG_00296","SJAG_05330","SJAG_03670","SJAG_03663","SJAG_02177","SJAG_04819","SJAG_01448","SJAG_01488","SJAG_04338","SJAG_01571","SJAG_02525","SJAG_01945","SJAG_01516","SJAG_01409","SJAG_03953","SJAG_04398","SJAG_02168","SJAG_01001","SJAG_05209","SJAG_03756","SJAG_03347","SJAG_02240","SJAG_00669","SJAG_02912","SJAG_04358"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72734,73810,75611,75656,76665,77373,78401,79474,79614,79624,79762,81151,81350,81481,81980,101421,101462,104615,105324,106016,120516],"is_not":false,"summary":null,"term":"GO:0005802"},{"annotations":[97679,109340,92681,93163,95170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"The network of interconnected tubular and cisternal structures located within the Golgi apparatus on the side distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination.","definition_xrefs":["ISBN:0815316194","PMID:9695800","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00669":null,"SJAG_01001":null,"SJAG_01409":null,"SJAG_01448":null,"SJAG_01488":null,"SJAG_01516":null,"SJAG_01571":null,"SJAG_01945":null,"SJAG_02168":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02525":null,"SJAG_02912":null,"SJAG_03347":null,"SJAG_03663":null,"SJAG_03670":null,"SJAG_03756":null,"SJAG_03953":null,"SJAG_04338":null,"SJAG_04340":null,"SJAG_04358":null,"SJAG_04398":null,"SJAG_04819":null,"SJAG_05209":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"trans-Golgi network","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao9456487"],"synonyms":[{"name":"Golgi trans face","type":"related"},{"name":"Golgi trans-face","type":"related"},{"name":"TGN","type":"exact"},{"name":"late Golgi","type":"related"},{"name":"maturing face","type":"related"},{"name":"trans Golgi network","type":"exact"},{"name":"trans face","type":"broad"}],"termid":"GO:0005802","terms_by_termid":{"GO:0005802":null,"GO:0032588":null}}


id: PBO:0109043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLTP3B divergent transcript","termid":"PBO:0109043"}


id: GO:1902336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retinal ganglion cell axon guidance.","definition_xrefs":["GOC:BHF","PMID:21658587","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinal ganglion cell axon guidance","termid":"GO:0090259"},{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"positively_regulates","term_name":"retinal ganglion cell axon guidance","termid":"GO:0031290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinal ganglion cell axon guidance","synonyms":[{"name":"activation of retinal ganglion cell axon guidance","type":"narrow"},{"name":"activation of retinal ganglion cell axon pathfinding","type":"narrow"},{"name":"positive regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"up regulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"up regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"up-regulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"up-regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"upregulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"upregulation of retinal ganglion cell axon pathfinding","type":"exact"}],"termid":"GO:1902336"}


id: GO:0061504
data:
  {"annotated_genes":["SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82145],"is_not":false,"summary":null,"term":"GO:0061504"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyclic threonylcarbamoyladenosine, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["PMID:23242255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"cyclic threonylcarbamoyladenosine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0061504","terms_by_termid":{"GO:0061504":null}}


id: PBO:0046696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS proto-oncogene 1, transcription factor","termid":"PBO:0046696"}


id: MONDO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal staphyloma","secondary_identifiers":["ICD10CM:H18.72","icd11.foundation:212928655","ICD9:371.73","DOID:12753","MEDGEN:509034","SCTID:52476003","UMLS:C0152440"],"termid":"MONDO:0001579","xrefs":{"Monarch":{"xref_id":"0001579"}}}


id: MONDO:0008598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trichodysplasia-xeroderma syndrome is an extremely rare, syndromic hair shaft anomaly characterized by sparse, coarse, brittle, excessively dry and slow-growing scalp hair, sparse axillary and pubic hair, sparse or absent eyelashes and eyebrows and dry skin. Hair shaft analysis shows pili torti, longitudinal splitting, grooves, peeling and scaling. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:3361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichodysplasia-xeroderma syndrome","secondary_identifiers":["GARD:5261","MEDGEN:349898","OMIM:190360","MESH:C566032","UMLS:C1860822"],"synonyms":[{"name":"trichodysplasia xeroderma","type":"related"},{"name":"trichodysplasia-xeroderma","type":"related"}],"termid":"MONDO:0008598","xrefs":{"Monarch":{"xref_id":"0008598"}}}


id: PR:Q9C116
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1786.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1786.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.04","synonyms":[{"name":"Spom972h-SPAC1786.04","type":"exact"}],"termid":"PR:Q9C116"}


id: GO:0018062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of an N-terminal peptidyl-tryptophan residue to form peptidyl-N2-succinyl-L-tryptophan.","definition_xrefs":["RESID:AA0130"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan succinylation (obsolete GO:0018062)","termid":"GO:0018062"}


id: PBO:0051533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 3 receptor subunit alpha","termid":"PBO:0051533"}


id: MONDO:0021527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the meningeal cluster.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"tumor of meninges","termid":"MONDO:0016743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of meninges","secondary_identifiers":["ICD10CM:D32","NCIT:C4957","UMLS:C0348426","MEDGEN:138093","SCTID:109913001","ICD10WHO:D32"],"synonyms":[{"name":"benign meningeal neoplasm","type":"exact"},{"name":"benign meningeal neoplasms","type":"exact"},{"name":"benign meningeal tumor","type":"exact"},{"name":"benign meningeal tumors","type":"exact"},{"name":"benign meningeal tumour","type":"exact"},{"name":"benign meningeal tumours","type":"exact"},{"name":"benign meninges neoplasm","type":"exact"},{"name":"benign meninges tumor","type":"exact"},{"name":"benign meninges tumour","type":"exact"},{"name":"benign neoplasm of the meninges","type":"exact"},{"name":"benign neoplasms of meninges","type":"exact"},{"name":"benign neoplasms of the meninges","type":"exact"},{"name":"benign tumor of meninges","type":"exact"},{"name":"benign tumor of the meninges","type":"exact"},{"name":"benign tumour of meninges","type":"exact"},{"name":"benign tumour of the meninges","type":"exact"},{"name":"meningeal cluster benign neoplasm","type":"exact"},{"name":"meningeal tumors, benign","type":"exact"}],"termid":"MONDO:0021527","xrefs":{"Monarch":{"xref_id":"0021527"}}}


id: MONDO:0013728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pregnancy loss, recurrent, susceptibility in which the cause of the disease is a mutation in the F2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility to, 2","secondary_identifiers":["OMIM:614390","UMLS:C3280672","MEDGEN:482302"],"synonyms":[{"name":"F2 pregnancy loss, recurrent, susceptibility","type":"exact"},{"name":"RPRGL2","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility caused by mutation in F2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, 2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013728","xrefs":{"Monarch":{"xref_id":"0013728"}}}


id: GO:0018156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-threonine and peptidyl-cysteine by the synthesis of (2S,3S,6R)-3-methyl-lanthionine (3-methyl-L-lanthionine).","definition_xrefs":["RESID:AA0112"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via (2S,3S,6R)-3-methyl-lanthionine (obsolete GO:0018156)","termid":"GO:0018156"}


id: PBO:0039795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAP1 antisense RNA 2","termid":"PBO:0039795"}


id: MONDO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign disorder of tyrosine metabolism detected upon newborn screening and often observed in premature infants. It shows no clinical symptoms. It is characterized by tyrosinemia, moderate hyperphenylalaninemia, and tyrosiluria that usually resolve after 2 months of age.","definition_xrefs":["Orphanet:3402"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"},{"relation_name":"is_a","term_name":"tyrosinemia","termid":"MONDO:0004741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"transient tyrosinemia of the newborn","secondary_identifiers":["UMLS:C0268485","MEDGEN:541331","GARD:5388"],"synonyms":[{"name":"transient neonatal tyrosinemia","type":"exact"},{"name":"transient tyrosinemia of the neonate","type":"exact"},{"name":"tyrosine-oxidase temporary deficiency","type":"related"}],"termid":"MONDO:0018083","xrefs":{"Monarch":{"xref_id":"0018083"}}}


id: FYPO:0006689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which insertion or deletion mutations occur at a higher frequency than normal.","definition_xrefs":["PMID:14599746","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mutator","termid":"FYPO:0000256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased insertion/deletion frequency","synonyms":[{"name":"increased indel frequency","type":"related"},{"name":"increased insertion or deletion frequency","type":"exact"}],"termid":"FYPO:0006689"}


id: GO:0160179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which iron is taken up from the contents of the intestine.","definition_xrefs":["PMID:17729393","PMID:16054062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal iron absorption","termid":"GO:0160179"}


id: PBO:0053080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer associated lncRNA 1","termid":"PBO:0053080"}


id: PBO:0074029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 17","termid":"PBO:0074029"}


id: PBO:0003038
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amino Acid Transporter","termid":"PBO:0003038"}


id: PBO:0078916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 5-1","termid":"PBO:0078916"}


id: PR:Q9UTL7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPN-loop GTPase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01930","PANTHER:PTHR21231:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.07c","secondary_identifiers":["UniProtKB:Q9UTL7"],"synonyms":[{"name":"ATP-binding domain 1 family member B homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GPN2","type":"exact"}],"termid":"PR:Q9UTL7"}


id: FYPO:0006101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the morphology of cytoplasmic microtubules is abnormal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002399","FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal interphase microtubules","synonyms":[{"name":"abnormal cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"abnormal interphase cytoplasmic microtubules","type":"exact"},{"name":"abnormal interphase microtubule morphology","type":"exact"},{"name":"abnormal interphase microtubule structure","type":"narrow"},{"name":"abnormal interphase microtubules during mitotic cell cycle","type":"related"},{"name":"abnormal interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006101"}


id: MONDO:0044646
data:
  {"annotated_genes":["SJAG_04074"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89140],"is_not":false,"summary":null,"term":"MONDO:0044646"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5567454","GARD:17911","OMIM:617193","DOID:0070423","MEDGEN:1798877","Orphanet:496641"],"synonyms":[{"name":"PEBAT","type":"exact"},{"name":"encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum","type":"exact"},{"name":"encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum; PEBAT","type":"exact"}],"termid":"MONDO:0044646","terms_by_termid":{"MONDO:0044646":null},"xrefs":{"Monarch":{"xref_id":"0044646"}}}


id: FYPO:0000818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of M-factor, the mating pheromone produced by mating type minus cells, released into the growth medium is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of pheromone in growth medium","termid":"FYPO:0000817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of M-factor in growth medium","synonyms":[{"name":"increased accumulation of M-factor in growth medium","type":"related"},{"name":"increased level of M-factor in growth medium","type":"exact"},{"name":"increased release of M-factor into growth medium","type":"related"}],"termid":"FYPO:0000818"}


id: GO:0098557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the smooth endoplasmic reticulum membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endoplasmic reticulum membrane","termid":"GO:0098554"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum membrane","termid":"GO:0030868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005789","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic side of smooth endoplasmic reticulum membrane","termid":"GO:0098557"}


id: PBO:0084082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine deaminase; a catabolic enzyme of the guanine salvage pathway producing xanthine and ammonia from guanine; activity is low in exponentially-growing cultures but expression is increased in post-diauxic and stationary-phase cultures","termid":"PBO:0084082"}


id: SO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which a change has occurred within the exonic region of the splice site, 1-2 bases from boundary.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_region_variant","termid":"SO:0001630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonic_splice_region_variant","synonyms":[{"name":"ANNOVAR:exonic;splicing","type":"exact"},{"name":"Seattleseq:coding-near-splice","type":"related"},{"name":"exonic splice region variant","type":"exact"}],"termid":"SO:0002084"}


id: PBO:0051604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 27","termid":"PBO:0051604"}


id: PBO:0003699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex large subunit Toa1 (predicted)","termid":"PBO:0003699"}


id: GO:1902701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to propan-2-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","PMID:19539744","PMID:18727018","GO_REF:0000093"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to propan-2-ol (obsolete GO:1902701)","synonyms":[{"name":"pentose breakdown to propan-2-ol","type":"exact"},{"name":"pentose catabolic process to isopropanol","type":"exact"},{"name":"pentose catabolic process to isopropyl alcohol","type":"exact"},{"name":"pentose catabolism to propan-2-ol","type":"exact"},{"name":"pentose degradation to propan-2-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902701"}


id: PBO:0051797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing M","termid":"PBO:0051797"}


id: GO:0021741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spinal trigeminal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:curators","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal trigeminal nucleus development","termid":"GO:0021741"}


id: GO:0071740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgD immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["PMID:11282392","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgD immunoglobulin complex","termid":"GO:0071738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"IgD B cell receptor complex","synonyms":[{"name":"membrane-bound IgD","type":"exact"},{"name":"surface IgD","type":"exact"}],"termid":"GO:0071740"}


id: GO:0160191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a C28-steroid + O2 + reduced NADPH--hemoprotein reductase = a (22S)-22-hydroxy C28-steroid + H+ + H2O + oxidized NADPH--hemoprotein reductase. Also catalyzes the C-22 hydroxylation of a variety of C27 and C29 steroids.","definition_xrefs":["EC:1.14.14.178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"steroid 22S-hydroxylase activity","synonyms":[{"name":"steroid C-22 hydroxylase activity","type":"exact"}],"termid":"GO:0160191"}


id: PBO:0043262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 20","termid":"PBO:0043262"}


id: PBO:0051475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-65 (pseudogene)","termid":"PBO:0051475"}


id: PR:O94527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD and tetratricopeptide repeats protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03590","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein iqw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.03","secondary_identifiers":["UniProtKB:O94527"],"synonyms":[{"name":"Spom972h-WDTC1","type":"exact"}],"termid":"PR:O94527"}


id: PBO:0060509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAPA antisense RNA 1","termid":"PBO:0060509"}


