# terms

id: MONDO:0012412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a late component of complement deficiency","termid":"MONDO:0015700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 7 deficiency","secondary_identifiers":["NANDO:2200785","UMLS:C1864694","MESH:C566443","DOID:0060300","MEDGEN:355270","GARD:18290","OMIM:610102"],"synonyms":[{"name":"C7 classic complement early component deficiency","type":"exact"},{"name":"C7 deficiency","type":"related"},{"name":"C7D","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C7","type":"exact"},{"name":"complement component 7 deficiency","type":"exact"}],"termid":"MONDO:0012412","xrefs":{"Monarch":{"xref_id":"0012412"}}}


id: GO:0002597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002594"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002595"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide antigen via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation of peptide antigen via MHC class Ib","type":"narrow"},{"name":"positive regulation of peptide antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide antigen via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide antigen via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide antigen via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide antigen via MHC class Ib","type":"exact"}],"termid":"GO:0002597"}


id: GO:0019934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic GMP (cGMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cGMP-mediated signaling","synonyms":[{"name":"cGMP-mediated signalling","type":"exact"}],"termid":"GO:0019934"}


id: GO:0098663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transmembrane transporter activity that is involved in importing some substance into a cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane transporter activity involved in import into cell (obsolete GO:0098663)","termid":"GO:0098663"}


id: MONDO:0023167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal alopecia congenital megalencephaly","termid":"MONDO:0023167","xrefs":{"Monarch":{"xref_id":"0023167"}}}


id: GO:0030782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (S)-7,8,13,14-tetrahydroprotoberberine + S-adenosyl-L-methionine = an (S)-cis-N-methyl-7,8,13,14-tetrahydroprotoberberine + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:76067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"(S)-tetrahydroprotoberberine N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-23969","EC:2.1.1.122"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-7,8,13,14-tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"},{"name":"tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"}],"termid":"GO:0030782"}


id: PBO:0027732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_DNA_replication_initiation","termid":"PBO:0027732"}


id: PBO:0077295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 38A","termid":"PBO:0077295"}


id: PBO:0055693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIX1 and RIOK2 antisense RNA 1","termid":"PBO:0055693"}


id: GO:0021892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a GABAergic interneuron residing in the cerebral cortex.","definition_xrefs":["PMID:12626695","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex neuron differentiation","termid":"GO:0021895"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex GABAergic interneuron differentiation","termid":"GO:0021892"}


id: GO:0018545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of a nitrate group to an amino or hydroxylamino group on toluene or a toluene derivative.","definition_xrefs":["UM-BBD_enzymeID:e0346"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H nitroreductase activity (obsolete GO:0018545)","termid":"GO:0018545"}


id: GO:0009861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The jasmonic acid and ethylene (ethene) dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.","definition_xrefs":["GOC:jy","PMID:10234273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"jasmonic acid and ethene-dependent systemic resistance","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance","type":"exact"}],"termid":"GO:0009861"}


id: GO:1904314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methamphetamine hydrochloride stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22174933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amine stimulus","termid":"GO:0071418"},{"relation_name":"is_a","term_name":"response to methamphetamine hydrochloride","termid":"GO:1904313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methamphetamine hydrochloride","synonyms":[{"name":"cellular response to methamphetamine HCL","type":"exact"}],"termid":"GO:1904314"}


id: SO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 57 to 71 nucleotide RNA that is a component of the U7 small nuclear ribonucleoprotein complex (U7 snRNP). The U7 snRNP is required for histone pre-mRNA processing.","definition_xrefs":["PMID:15526162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U7_snRNA","synonyms":[{"name":"U7 small nuclear RNA","type":"exact"},{"name":"U7 snRNA","type":"exact"},{"name":"small nuclear RNA U7","type":"exact"},{"name":"snRNA U7","type":"exact"}],"termid":"SO:0002338"}


id: FYPO:0001087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal glucosyltransferase activity","termid":"FYPO:0001087"}


id: PBO:0067578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 735, pseudogene","termid":"PBO:0067578"}


id: PBO:0040801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e23","termid":"PBO:0040801"}


id: GO:0033863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 1,5-diphosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + ADP + H+.","definition_xrefs":["RHEA:20109","EC:2.7.4.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"ribose 1,5-bisphosphate phosphokinase activity","secondary_identifiers":["MetaCyc:RXN0-1401","KEGG_REACTION:R06836"],"synonyms":[{"name":"ATP:ribose-1,5-bisphosphate phosphotransferase activity","type":"related"},{"name":"PhnN","type":"related"},{"name":"ribose 1,5-bisphosphokinase activity","type":"related"}],"termid":"GO:0033863"}


id: PBO:0071736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 34","termid":"PBO:0071736"}


id: PBO:0046722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EvC ciliary complex subunit 2","termid":"PBO:0046722"}


id: GO:0006627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of peptide bonds in proteins, usually near the N terminus, contributing to the process of import into the mitochondrion. Several different peptidases mediate cleavage of proteins destined for different mitochondrial compartments.","definition_xrefs":["PMID:12191769","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein processing","termid":"GO:0034982"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"protein processing involved in protein targeting to mitochondrion","synonyms":[{"name":"mitochondrial processing","type":"broad"},{"name":"mitochondrial protein processing during import","type":"related"}],"termid":"GO:0006627"}


id: GO:0071485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to absence of light","termid":"GO:0009646"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to absence of light","synonyms":[{"name":"cellular response to darkness","type":"related"}],"termid":"GO:0071485"}


id: PATO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a cytoplasm that contains fluid filled cavities.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolated","termid":"PATO:0000941"}


id: PR:P40234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cki2 gene.","definition_xrefs":["UniProtKB:P40234","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.05c","synonyms":[{"name":"Spom972h-cki2","type":"exact"}],"termid":"PR:P40234"}


id: PBO:0028774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_nitroprusside","termid":"PBO:0028774"}


id: PBO:0079599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E3","termid":"PBO:0079599"}


id: GO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a proplastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid nucleoid","termid":"GO:0042646"},{"relation_name":"part_of","term_name":"proplastid stroma","termid":"GO:0009571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proplastid nucleoid","termid":"GO:0042647"}


id: GO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response resulting from recognition of immune complexes via complement or Fc receptors on effector cells leading to activation of neutrophils and other leukocytes and damage to bystander tissue.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"},{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type III hypersensitivity","secondary_identifiers":["Wikipedia:Type_III_hypersensitivity"],"termid":"GO:0001802"}


id: MONDO:1011892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal intradural arachnoid cyst, non-human animal","secondary_identifiers":["OMIA:001923"],"termid":"MONDO:1011892","xrefs":{"Monarch":{"xref_id":"1011892"}}}


id: GO:0061452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the retrotrapezoid nucleus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"retrotrapezoid nucleus development","termid":"GO:0061451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotrapezoid nucleus neuron differentiation","termid":"GO:0061452"}


id: GO:0043773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) GTP + F420-0 + L-glutamate = GDP + phosphate + F420-1, and (2) GTP + F420-1 + L-glutamate = GDP + phosphate + gamma-F420-2. This is the GTP-dependent successive addition of two L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form F420-0-glutamyl-glutamate (F420-2), with a gamma-linkage between the two glutamates.","definition_xrefs":["PMID:17669425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"coenzyme F420-0 gamma-glutamyl ligase activity","synonyms":[{"name":"F420-0 gamma-glutamyl ligase activity","type":"exact"}],"termid":"GO:0043773"}


id: PATO:0000117
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"size","termid":"PATO:0000117"}


id: PBO:0068442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 16, pseudogene","termid":"PBO:0068442"}


id: PBO:0049404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1C","termid":"PBO:0049404"}


id: GO:1904397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular junction development.","definition_xrefs":["GO_REF:0000058","PMID:7722643","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuromuscular junction development","termid":"GO:1904396"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuromuscular junction development","synonyms":[{"name":"down regulation of NMJ stability","type":"related"},{"name":"down regulation of neuromuscular junction development","type":"exact"},{"name":"down regulation of neuromuscular junction organization","type":"exact"},{"name":"down regulation of neuromuscular junction stability","type":"related"},{"name":"down-regulation of NMJ stability","type":"related"},{"name":"down-regulation of neuromuscular junction development","type":"exact"},{"name":"down-regulation of neuromuscular junction organization","type":"exact"},{"name":"down-regulation of neuromuscular junction stability","type":"related"},{"name":"downregulation of NMJ stability","type":"related"},{"name":"downregulation of neuromuscular junction development","type":"exact"},{"name":"downregulation of neuromuscular junction organization","type":"exact"},{"name":"downregulation of neuromuscular junction stability","type":"related"},{"name":"inhibition of NMJ stability","type":"related"},{"name":"inhibition of neuromuscular junction development","type":"narrow"},{"name":"inhibition of neuromuscular junction organization","type":"narrow"},{"name":"inhibition of neuromuscular junction stability","type":"related"},{"name":"negative regulation of NMJ stability","type":"related"},{"name":"negative regulation of neuromuscular junction organization","type":"exact"},{"name":"negative regulation of neuromuscular junction stability","type":"related"}],"termid":"GO:1904397"}


id: FYPO:0006318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is lower than normal. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PomBase:mah","PMID:29215009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased DNA resection during replication fork processing","synonyms":[{"name":"decreased DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"decreased DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"decreased DNA resectioning during replication fork processing","type":"exact"},{"name":"decreased extent of DNA resection during replication fork processing","type":"exact"},{"name":"decreased extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"},{"name":"reduced DNA resection during replication fork processing","type":"exact"}],"termid":"FYPO:0006318"}


id: PBO:0079351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB bipartite transcription factor","termid":"PBO:0079351"}


id: PBO:0062498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily D member 2","termid":"PBO:0062498"}


id: MONDO:1011831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal axonopathy, non-human animal","secondary_identifiers":["OMIA:000098"],"termid":"MONDO:1011831","xrefs":{"Monarch":{"xref_id":"1011831"}}}


id: GO:1900221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid-beta clearance.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid-beta clearance","synonyms":[{"name":"regulation of beta-amyloid clearance","type":"exact"}],"termid":"GO:1900221"}


id: MONDO:0005129
data:
  {"annotated_genes":["SJAG_01242","SJAG_02919","SJAG_04567","SJAG_01745","SJAG_03815","SJAG_00404","SJAG_00624","SJAG_02645","SJAG_03581","SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88847,88848,88849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013411"},{"annotations":[88862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011547"},{"annotations":[88231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013859"},{"annotations":[87351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014565"},{"annotations":[87007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014673"},{"annotations":[87903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008925"},{"annotations":[89056,89055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032735"},{"annotations":[87306,87307,87305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011413"}]},"cv_name":"mondo","definition":"Partial or complete opacity of the crystalline lens of one or both eyes that decreases visual acuity and eventually results in blindness. Some cataracts appear in infancy or in childhood, but most develop in older individuals. (Sternberg Diagnostic Surgical Pathology, 3rd ed.)","definition_xrefs":["NCIT:C26713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00624":null,"SJAG_00750":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_02645":null,"SJAG_02919":null,"SJAG_03581":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:366.8","UMLS:C0086543","MEDGEN:39462","ICD9:366.9","SCTID:193570009","DOID:83","icd11.foundation:109841337","ICD9:366","MESH:D002386","OMIMPS:116200","ICD9:366.44","HP:0000518"],"synonyms":[{"name":"cataract","type":"exact"},{"name":"cataract (disease)","type":"exact"},{"name":"opacity of the lens","type":"exact"}],"termid":"MONDO:0005129","terms_by_termid":{"MONDO:0008925":null,"MONDO:0011413":null,"MONDO:0011547":null,"MONDO:0013411":null,"MONDO:0013859":null,"MONDO:0014565":null,"MONDO:0014673":null,"MONDO:0032735":null},"xrefs":{"Monarch":{"xref_id":"0005129"}}}


id: GO:0071596
data:
  {"annotated_genes":["SJAG_04619","SJAG_01253","SJAG_02705"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65790,76273,98891],"is_not":false,"summary":null,"term":"GO:0071596"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the N-end rule pathway. In the N-end rule pathway, destabilizing N-terminal residues (N-degrons) in substrates are recognized by E3 ligases (N-recognins), whereupon the substrates are linked to ubiquitin and then delivered to the proteasome for degradation.","definition_xrefs":["GOC:rb","GOC:mah","PMID:19246002","PMID:9112437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01253":null,"SJAG_02705":null,"SJAG_04619":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-dependent protein catabolic process via the N-end rule pathway","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin-dependent protein breakdown via the N-end rule pathway","type":"exact"},{"name":"ubiquitin-dependent protein catabolism via the N-end rule pathway","type":"exact"},{"name":"ubiquitin-dependent protein degradation via the N-end rule pathway","type":"exact"}],"termid":"GO:0071596","terms_by_termid":{"GO:0071596":null}}


id: FYPO:0004581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter is increased.","definition_xrefs":["GO:0007329","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal positive regulation of transcription","termid":"FYPO:0000623"},{"relation_name":"is_a","term_name":"abnormal transcriptional response to pheromone","termid":"FYPO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased transcriptional response to pheromone","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0004581"}


id: PBO:0041566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 96","termid":"PBO:0041566"}


id: PBO:0034306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-preys_on","termid":"PBO:0034306"}


id: PBO:0075756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase","termid":"PBO:0075756"}


id: MONDO:0013198
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88380,88381],"is_not":false,"summary":null,"term":"MONDO:0013198"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the MYH6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1EE","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110453","GARD:15639","MEDGEN:412965","MESH:C567683","OMIM:613252","UMLS:C2750466"],"synonyms":[{"name":"CMD1EE","type":"exact"},{"name":"MYH6 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1EE","type":"related"},{"name":"cardiomyopathy, dilated, type 1Ee","type":"exact"},{"name":"dilated cardiomyopathy type 1EE","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in MYH6","type":"exact"}],"termid":"MONDO:0013198","terms_by_termid":{"MONDO:0013198":null},"xrefs":{"Monarch":{"xref_id":"0013198"}}}


id: GO:0042691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of crystal cell differentiation","termid":"GO:0042689"},{"relation_name":"is_a","term_name":"positive regulation of hemocyte differentiation","termid":"GO:0045612"},{"relation_name":"positively_regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of crystal cell differentiation","synonyms":[{"name":"activation of crystal cell differentiation","type":"narrow"},{"name":"stimulation of crystal cell differentiation","type":"narrow"},{"name":"up regulation of crystal cell differentiation","type":"exact"},{"name":"up-regulation of crystal cell differentiation","type":"exact"},{"name":"upregulation of crystal cell differentiation","type":"exact"}],"termid":"GO:0042691"}


id: PBO:0000262
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.4.1","termid":"PBO:0000262"}


id: GO:0106292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + 2 O2 = H+ + NADP+ + 2 superoxide.","definition_xrefs":["RHEA:63180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superoxide-generating NAD(P)H oxidase activity","termid":"GO:0016175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"superoxide-generating NADPH oxidase activity","termid":"GO:0106292"}


id: PBO:0062264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 1","termid":"PBO:0062264"}


id: PBO:0058384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4756","termid":"PBO:0058384"}


id: PATO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe mating type","termid":"PATO:0001343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"h minus","synonyms":[{"name":"M","type":"exact"},{"name":"h -","type":"exact"}],"termid":"PATO:0001345"}


id: PBO:0060928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofascin","termid":"PBO:0060928"}


id: GO:0071170
data:
  {"annotated_genes":["SJAG_04855","SJAG_00073","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117023],"is_not":false,"summary":null,"term":"GO:0071170"},{"annotations":[104225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071946"},{"annotations":[95300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that takes place at a specific termination site.","definition_xrefs":["GOC:mah","PMID:18723894","PMID:12009298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication termination","termid":"GO:0006274"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"site-specific DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071170","terms_by_termid":{"GO:0071170":null,"GO:0071171":null,"GO:0071946":null}}


id: PBO:0090737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic cohesin loader subunit Pds5","termid":"PBO:0090737"}


id: MONDO:0010703
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88975],"is_not":false,"summary":null,"term":"MONDO:0010703"}]},"cv_name":"mondo","definition":"Ornithine transcarbamylase deficiency (OTCD) is a disorder of urea cycle metabolism and ammonia detoxification characterized by either a severe, neonatal-onset disease found almost exclusively in males, or later-onset (partial) forms of the disease. Both present with episodes of hyperammonemia that can be fatal and which can lead to neurological complications.","definition_xrefs":["Orphanet:664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"ornithine carbamoyltransferase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1822444026","MedDRA:10052450","OMIM:311250","NCIT:C84957","UMLS:C0268542","EFO:0007409","GARD:8391","MEDGEN:75692","MESH:D020163","NANDO:2200479","SCTID:80908008","DOID:9271","NANDO:1200804"],"synonyms":[{"name":"OCT deficiency","type":"exact"},{"name":"OTC deficiency","type":"exact"},{"name":"OTCD","type":"exact"},{"name":"deficiency of citrulline phosphorylase","type":"exact"},{"name":"ornithine carbamoyltransferase deficiency","type":"exact"},{"name":"ornithine carbamoyltransferase deficiency disease","type":"exact"},{"name":"ornithine transcarbamylase deficiency","type":"exact"},{"name":"ornithine transcarbamylase deficiency, hyperammonemia due to","type":"related"},{"name":"valproate sensitivity","type":"related"}],"termid":"MONDO:0010703","terms_by_termid":{"MONDO:0010703":null},"xrefs":{"Monarch":{"xref_id":"0010703"}}}


id: GO:0072495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A class of nuclear body in the eukaryotic host cell, first seen after silver staining by Ramon y Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA. The host is the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"},{"relation_name":"part_of","term_name":"host cell nucleoplasm","termid":"GO:0044095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Cajal body","synonyms":[{"name":"coiled body of host","type":"exact"},{"name":"host cell coiled body","type":"exact"}],"termid":"GO:0072495"}


id: PBO:0062994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C and casein kinase substrate in neurons 3","termid":"PBO:0062994"}


id: GO:0090639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that involves a one-step direct condensation of choline with CDP-diacylglycerol to form phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY-6826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from choline and CDP-diacylglycerol","termid":"GO:0090639"}


id: PBO:0069590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 864, pseudogene","termid":"PBO:0069590"}


id: PBO:0113143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for yeast Rab family members; Ypt1p is the preferred in vitro substrate but also acts on Sec4p, Ypt31p and Ypt32p; involved in the regulation of ER to Golgi vesicle transport; localizes to the ER and peroxisomes","termid":"PBO:0113143"}


id: PBO:0079294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 11","termid":"PBO:0079294"}


id: MONDO:0017607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Caudal regression sequence is a rare congenital malformation of the lower spinal segments associated with aplasia or hypoplasia of the sacrum and lumbar spine.","definition_xrefs":["Orphanet:3027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"caudal regression sequence","secondary_identifiers":["MEDGEN:81254","NCIT:C124505","MedDRA:10054842","UMLS:C0300948","MedDRA:10068896","DOID:0080700","GARD:6007","MedDRA:10059387","NORD:902","icd11.foundation:269997265"],"synonyms":[{"name":"Caudal Regression Syndrome","type":"exact"},{"name":"caudal dysplasia","type":"exact"},{"name":"sacral agenesis syndrome","type":"exact"},{"name":"sacral regression syndrome","type":"exact"}],"termid":"MONDO:0017607","xrefs":{"Monarch":{"xref_id":"0017607"}}}


id: GO:0039645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the normal execution of the host cell G1/S transition checkpoint. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24501404","VZ:880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell cycle progression","termid":"GO:0044071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell cycle G1/S transition checkpoint","synonyms":[{"name":"G1/S host cell cycle checkpoint dysregulation by virus","type":"exact"},{"name":"modulation by virus of host G1/S transition checkpoint","type":"related"},{"name":"perturbation by virus of host G1/S transition checkpoint","type":"narrow"}],"termid":"GO:0039645"}


id: GO:2001115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a methanopterin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanopterin-containing compound metabolic process","synonyms":[{"name":"methanopterin metabolism","type":"exact"}],"termid":"GO:2001115"}


id: PBO:0044349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 34","termid":"PBO:0044349"}


id: GO:0019245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D(-)-lactate from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process from pyruvate","termid":"GO:0019244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D(-)-lactate biosynthetic process from pyruvate","synonyms":[{"name":"D(-)-lactate anabolism from pyruvate","type":"exact"},{"name":"D(-)-lactate formation from pyruvate","type":"exact"},{"name":"D(-)-lactate synthesis from pyruvate","type":"exact"}],"termid":"GO:0019245"}


id: FYPO:0002563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to nuclear periphery","synonyms":[{"name":"normal protein localisation to nuclear periphery","type":"exact"},{"name":"normal protein localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0002563"}


id: GO:0003932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete SAR small monomeric GTPase activity (obsolete GO:0003932)","synonyms":[{"name":"SAR small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003932"}


id: MONDO:0040501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"COL1A2-related Ehlers-Danlos syndrome","termid":"MONDO:0100606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, arthrochalasia type, 2","secondary_identifiers":["GARD:16256","DOID:0080728","OMIM:617821"],"synonyms":[{"name":"EDS 7B","type":"exact"},{"name":"EDS VIIB","type":"exact"},{"name":"EDSARTH2","type":"related"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type, 2","type":"exact"},{"name":"Ehlers-Danlos syndrome, type VIIb, autosomal dominant","type":"exact"}],"termid":"MONDO:0040501","xrefs":{"Monarch":{"xref_id":"0040501"}}}


id: GO:0030596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides.","definition_xrefs":["EC:3.2.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-L-rhamnosidase activity","secondary_identifiers":["MetaCyc:3.2.1.40-RXN","KEGG_REACTION:R02436","RHEA:17465"],"synonyms":[{"name":"alpha-L-rhamnosidase N","type":"related"},{"name":"alpha-L-rhamnosidase T","type":"related"},{"name":"alpha-L-rhamnoside rhamnohydrolase activity","type":"related"}],"termid":"GO:0030596"}


id: PBO:0081249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 20","termid":"PBO:0081249"}


id: FYPO:0006429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in subtelomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeres during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"normal histone H3K9me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006429"}


id: PBO:0051541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 receptor","termid":"PBO:0051541"}


id: GO:0098797
data:
  {"annotated_genes":["SJAG_02233","SJAG_00104","SJAG_05229","SJAG_02444","SJAG_00800","SJAG_02805","SJAG_03081","SJAG_01978","SJAG_04026","SJAG_04675","SJAG_01167","SJAG_04677"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76346,58827,80144,110309],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030122"},{"annotations":[72602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"},{"annotations":[76098,77187,108465,82273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005834"},{"annotations":[79605,79818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[76341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02444":null,"SJAG_02805":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane protein complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098797","terms_by_termid":{"GO:0005834":null,"GO:0005891":null,"GO:0030122":null,"GO:0033573":null,"GO:0038038":null}}


id: MONDO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized scleroderma is the skin localized form of scleroderma characterized by fibrosis of the skin causing cutaneous plaques or strips.","definition_xrefs":["Orphanet:90289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scleroderma","termid":"MONDO:0019340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"localized scleroderma","secondary_identifiers":["MESH:D012594","GARD:7058","NCIT:C72069","UMLS:C0036420","EFO:1001361","ICD10CM:L94.0","icd11.foundation:1430740369","DOID:8472","MEDGEN:48586","ICD9:701.0","MedDRA:10039712","SCTID:201048007"],"synonyms":[{"name":"Scleroderma, circumscribed or localised","type":"exact"},{"name":"Scleroderma, circumscribed or localized","type":"exact"},{"name":"Scleroderma, localised","type":"related"},{"name":"Scleroderma, localized","type":"related"},{"name":"circumscribed scleroderma","type":"exact"},{"name":"localised fibrosing scleroderma","type":"exact"},{"name":"localised morphea","type":"exact"},{"name":"localised morphoea","type":"exact"},{"name":"localised scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"localized fibrosing scleroderma","type":"exact"},{"name":"localized morphea","type":"exact"},{"name":"localized morphoea","type":"exact"},{"name":"localized scleroderma","type":"exact"},{"name":"localized scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"morphea","type":"exact"}],"termid":"MONDO:0019562","xrefs":{"Monarch":{"xref_id":"0019562"}}}


id: GO:0098542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to other organism","secondary_identifiers":["GO:0009814"],"synonyms":[{"name":"defence response incompatible interaction","type":"narrow"},{"name":"defence response to pathogen, incompatible interaction","type":"narrow"},{"name":"defense response, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogen","type":"narrow"}],"termid":"GO:0098542"}


id: PBO:0074299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted LY6/PLAUR domain containing 2","termid":"PBO:0074299"}


id: GO:0003349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an epicardial cell acquires the specialized structural and/or functional features of a cardiac endothelial cell.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac endothelial cell differentiation","termid":"GO:0003349"}


id: MONDO:0009156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, congenital limb malformation disorder characterized by hypoplasia or absence of central digital rays of the hands and/or feet and the presence of one or more, unilateral or bilateral, supernumerary digits on postaxial rays, ranging from hypoplastic digits devoid of osseous structures to complete duplication of a digit. Cutaneous syndactyly, symphalangism and clinodactyly have also been reported. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:1892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectrodactyly-polydactyly syndrome","secondary_identifiers":["MEDGEN:384042","OMIM:225290","MESH:C565601","UMLS:C1857040","GARD:2068"],"synonyms":[{"name":"ectrodactyly polydactyly","type":"exact"},{"name":"ectrodactyly-polydactyly","type":"exact"}],"termid":"MONDO:0009156","xrefs":{"Monarch":{"xref_id":"0009156"}}}


id: MONDO:0017651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary myoclonus (obsolete MONDO:0017651)","secondary_identifiers":["Orphanet:306750"],"termid":"MONDO:0017651","xrefs":{"Monarch":{"xref_id":"0017651"}}}


id: FYPO:0008309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell divides with a greater surface area than normal (i.e. compared to wild-type cells under the same conditions).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable swollen vegetative cell","termid":"FYPO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cell surface area at division","termid":"FYPO:0008309"}


id: PBO:0071474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 15","termid":"PBO:0071474"}


id: PBO:0055280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2707","termid":"PBO:0055280"}


id: FYPO:0006832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis begins earlier than normal.","definition_xrefs":["PomBase:mah","GO:0031671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"premature primary cell septum biogenesis","synonyms":[{"name":"advanced primary cell septum biogenesis","type":"exact"},{"name":"premature primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"premature primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"premature primary cell septum formation","type":"exact"},{"name":"premature primary septum biogenesis","type":"exact"},{"name":"premature primary septum synthesis","type":"related"}],"termid":"FYPO:0006832"}


id: PBO:0113006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aromatic aminotransferase II; involved in tyrosine, phenylalanine, and methionine metabolism; involved with Aro8p in production of kynurenic acid to detoxify excess tryptophan","termid":"PBO:0113006"}


id: PR:Q9P7U5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7U5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C977.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.03","synonyms":[{"name":"Spom972h-SPAC977.03","type":"exact"}],"termid":"PR:Q9P7U5"}


id: MONDO:0007799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemic bone disease","secondary_identifiers":["MESH:C564145","OMIM:146350","UMLS:C1840321","MEDGEN:333534"],"synonyms":[{"name":"HBD","type":"related"},{"name":"hypophosphatemic bone disease","type":"exact"}],"termid":"MONDO:0007799","xrefs":{"Monarch":{"xref_id":"0007799"}}}


id: _global:is_measurement_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_measurement_of","termid":"_global:is_measurement_of"}


id: GO:0036521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of protein localisation to the host phagosome. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25063865","GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host protein localization to phagocytic vesicle (obsolete GO:0036521)","synonyms":[{"name":"modulation by symbiont of host protein localisation to phagosome","type":"related"}],"termid":"GO:0036521"}


id: PR:O74807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mhf1 gene.","definition_xrefs":["UniProtKB:O74807","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHF histone-fold complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.16","synonyms":[{"name":"Spom972h-mhf1","type":"exact"}],"termid":"PR:O74807"}


id: PBO:0075509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2","termid":"PBO:0075509"}


id: PBO:0063865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIF1 5'-to-3' DNA helicase","termid":"PBO:0063865"}


id: PBO:0056994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR34A host gene","termid":"PBO:0056994"}


id: GO:1900984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of vindoline.","definition_xrefs":["GOC:yaf","GOC:TermGenie","MetaCyc:PWY-5292"],"gene_count":0,"genotype_count":0,"name":"obsolete vindoline catabolic process (obsolete GO:1900984)","synonyms":[{"name":"vindoline breakdown","type":"exact"},{"name":"vindoline catabolism","type":"exact"},{"name":"vindoline degradation","type":"exact"}],"termid":"GO:1900984"}


id: PR:Q00472
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleotide monophosphatase NagD that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03532","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitrophenylphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.15","secondary_identifiers":["UniProtKB:Q00472"],"synonyms":[{"name":"PNPPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nagD","type":"exact"}],"termid":"PR:Q00472"}


id: PBO:0047459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ficolin 3","termid":"PBO:0047459"}


id: MONDO:0010468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 5","secondary_identifiers":["MESH:C563670","DOID:0080968","GARD:18321","UMLS:C1835857","MEDGEN:324377","OMIM:300870"],"synonyms":[{"name":"ANIB5","type":"exact"},{"name":"aneurysm, intracranial BERRY, 5","type":"related"}],"termid":"MONDO:0010468","xrefs":{"Monarch":{"xref_id":"0010468"}}}


id: PBO:0069768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1051, pseudogene","termid":"PBO:0069768"}


id: GO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal execution of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction. For example, some viruses are able to activate host autophagy as a cellular survival mechanism, hence delaying or inhibiting apoptosis.","definition_xrefs":["GOC:bf","VZ:846","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host autophagy","termid":"GO:0075071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host autophagy","secondary_identifiers":["GO:0075044"],"synonyms":[{"name":"activation of host autophagy by virus","type":"exact"},{"name":"autophagy of host cells involved in interaction with symbiont","type":"related"},{"name":"induction by virus of host autophagy","type":"narrow"},{"name":"positive regulation by virus of host autophagy","type":"broad"}],"termid":"GO:0039520"}


id: PBO:0109827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex LRR repeat subunit Tel2","termid":"PBO:0109827"}


id: GO:1903188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:19467235","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of vitellogenesis","termid":"GO:1903186"},{"relation_name":"positively_regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vitellogenesis","synonyms":[{"name":"activation of vitellogenesis","type":"narrow"},{"name":"activation of yolk production","type":"narrow"},{"name":"positive regulation of yolk production","type":"exact"},{"name":"up regulation of vitellogenesis","type":"exact"},{"name":"up regulation of yolk production","type":"exact"},{"name":"up-regulation of vitellogenesis","type":"exact"},{"name":"up-regulation of yolk production","type":"exact"},{"name":"upregulation of vitellogenesis","type":"exact"},{"name":"upregulation of yolk production","type":"exact"}],"termid":"GO:1903188"}


id: PBO:0087038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L18B; homologous to mammalian ribosomal protein L18, no bacterial homolog; RPL18B has a paralog, RPL18A, that arose from the whole genome duplication","termid":"PBO:0087038"}


id: MONDO:0004858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the normal flow of the contents of the gallbladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"occlusion of gallbladder","secondary_identifiers":["ICD10CM:K82.0","icd11.foundation:1945915335","DOID:9714","ICD9:575.2","UMLS:C0156214","MEDGEN:57845","SCTID:197416005"],"synonyms":[{"name":"obstruction of gallbladder","type":"exact"}],"termid":"MONDO:0004858","xrefs":{"Monarch":{"xref_id":"0004858"}}}


id: PBO:0027637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_separation","termid":"PBO:0027637"}


id: PBO:0117146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 1L","termid":"PBO:0117146"}


id: FYPO:0007661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during metaphase of meiosis I.","definition_xrefs":["PomBase:mah","PMID:11331883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during meiosis I","termid":"FYPO:0004214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to kinetochore during meiotic metaphase I","synonyms":[{"name":"normal protein localisation to kinetochore during meiotic metaphase I","type":"exact"},{"name":"normal protein localization to kinetochore during meiosis I metaphase","type":"exact"}],"termid":"FYPO:0007661"}


id: PBO:0062754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily M member 1","termid":"PBO:0062754"}


id: PBO:0085543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; least basic of non-acidic ribosomal proteins; phosphorylated in vivo; essential for viability; homologous to mammalian ribosomal protein S5 and bacterial S7","termid":"PBO:0085543"}


id: PBO:0008887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi at silenced MAT3 locus","termid":"PBO:0008887"}


id: PBO:0087690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport and NPC biogenesis; also plays roles in several processes that may require localization of genes or chromosomes at the nuclear periphery, including double-strand break repair, transcription and chromatin silencing; homologous to human NUP107","termid":"PBO:0087690"}


id: PBO:0070033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1330, pseudogene","termid":"PBO:0070033"}


id: PBO:0077055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 1","termid":"PBO:0077055"}


id: MONDO:0007542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camurati-Englemann disease (CED) is a rare, clinically variable bone dysplasia syndrome characterized by hyperostosis of the long bones, skull, spine and pelvis, associated with severe pain in the extremities, a wide-based waddling gait, joint contractures, muscle weakness and easy fatigability.","definition_xrefs":["Orphanet:1328"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteosclerosis","termid":"MONDO:0002933"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Camurati-Engelmann disease","secondary_identifiers":["ICD9:756.59","GARD:1072","ICD10CM:Q78.3","NANDO:2200970","NCIT:C84610","NORD:885","UMLS:C0011989","SCTID:318761000119105","MEDGEN:4268","OMIM:131300","DOID:4997"],"synonyms":[{"name":"CAEND","type":"related"},{"name":"CED","type":"related"},{"name":"Camurati-Engelmann disease","type":"exact"},{"name":"Camurati-Engelmann syndrome","type":"exact"},{"name":"Camurati-Englemann disease","type":"exact"},{"name":"DPD1","type":"related"},{"name":"Engelman's disease","type":"exact"},{"name":"Engelmann disease","type":"related"},{"name":"diaphyseal dysplasia","type":"exact"},{"name":"diaphyseal dysplasia 1, progressive","type":"related"},{"name":"progressive diaphyseal dysplasia","type":"exact"}],"termid":"MONDO:0007542","xrefs":{"Monarch":{"xref_id":"0007542"}}}


id: GO:0060623
data:
  {"annotated_genes":["SJAG_01837","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118676,104334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of chromosome condensation, the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"regulates","term_name":"chromosome condensation","termid":"GO:0030261"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060623","terms_by_termid":{"GO:1903380":null}}


id: PBO:0004285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF866 domain protein","termid":"PBO:0004285"}


id: GO:0075175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cAMP-mediated signaling in response to host (obsolete GO:0075175)","synonyms":[{"name":"positive regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"positive regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"positive regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075175"}


id: MONDO:0011052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelia cleft lip palate hydrocephalus iris coloboma","secondary_identifiers":["MEDGEN:321957","OMIM:601357","UMLS:C1832434","MESH:C536713"],"synonyms":[{"name":"ACLH","type":"related"},{"name":"amelia cleft lip palate hydrocephalus iris coloboma","type":"exact"},{"name":"bilateral brachial amelia, facial clefts, encephalocele, orbital cyst and omphalocele","type":"related"},{"name":"brachial AMELIA, cleft LIP, and holoprosencephaly","type":"related"},{"name":"brachial amelia, forebrain defects and facial clefts","type":"related"},{"name":"brachial amelia, forebrain defects, and Facial clefts","type":"related"}],"termid":"MONDO:0011052","xrefs":{"Monarch":{"xref_id":"0011052"}}}


id: PBO:0028823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology","termid":"PBO:0028823"}


id: PBO:0058537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6082","termid":"PBO:0058537"}


id: PBO:0055616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3055","termid":"PBO:0055616"}


id: GO:1901634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle membrane organization","synonyms":[{"name":"activation of SLMV biogenesis","type":"narrow"},{"name":"activation of synaptic vesicle membrane organisation","type":"narrow"},{"name":"activation of synaptic vesicle membrane organization","type":"narrow"},{"name":"activation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"positive regulation of SLMV biogenesis","type":"narrow"},{"name":"positive regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"positive regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"up regulation of SLMV biogenesis","type":"narrow"},{"name":"up regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"up regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"up regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"up-regulation of SLMV biogenesis","type":"narrow"},{"name":"up-regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"up-regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"up-regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"upregulation of SLMV biogenesis","type":"narrow"},{"name":"upregulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"upregulation of synaptic vesicle membrane organization","type":"exact"},{"name":"upregulation of synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:1901634"}


id: MONDO:0957545
data:
  {"annotated_genes":["SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88290],"is_not":false,"summary":null,"term":"MONDO:0957545"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2I","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620462","UMLS:C5830685","MEDGEN:1841321"],"termid":"MONDO:0957545","terms_by_termid":{"MONDO:0957545":null},"xrefs":{"Monarch":{"xref_id":"0957545"}}}


id: GO:0043924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to suramin, a naphthalenesulfonic acid compound which is used in the treatment of diseases caused by trypanosomes and worms.","definition_xrefs":["Wikipedia:Suramin","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"suramin binding","synonyms":[{"name":"Germanin binding","type":"exact"}],"termid":"GO:0043924"}


id: MONDO:1011783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha fucosidosis, non-human animal","secondary_identifiers":["OMIA:000396"],"termid":"MONDO:1011783","xrefs":{"Monarch":{"xref_id":"1011783"}}}


id: GO:0033004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of mast cell activation","termid":"GO:0033003"},{"relation_name":"negatively_regulates","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell activation","termid":"GO:0033004"}


id: MONDO:0005605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm composed of transitional cells which show preservation of the nuclear polarity.","definition_xrefs":["NCIT:C4115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transitional cell papilloma","secondary_identifiers":["ICDO:8120/0","EFO:0006497","MEDGEN:137734","DOID:2670","UMLS:C0334266"],"synonyms":[{"name":"papilloma, transitional cell, benign","type":"exact"},{"name":"transitional cell papilloma","type":"exact"},{"name":"transitional cell papilloma NOS (morphologic abnormality)","type":"exact"},{"name":"transitional cell papilloma, benign","type":"exact"},{"name":"transitional cell papilloma, benign (morphologic abnormality)","type":"exact"},{"name":"transitional papilloma","type":"exact"}],"termid":"MONDO:0005605","xrefs":{"Monarch":{"xref_id":"0005605"}}}


id: PBO:0035968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_cable_assembly","termid":"PBO:0035968"}


id: GO:1904869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to Cajal body.","definition_xrefs":["GOC:BHF_telomere","GO_REF:0000058","GOC:BHF","GOC:nc","PMID:25467444","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"regulates","term_name":"protein localization to Cajal body","termid":"GO:1904867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to Cajal body","synonyms":[{"name":"regulation of protein localisation in Cajal body","type":"exact"},{"name":"regulation of protein localisation to Cajal body","type":"exact"},{"name":"regulation of protein localization in Cajal body","type":"exact"}],"termid":"GO:1904869"}


id: GO:2000683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to X-ray.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to X-ray","termid":"GO:0071481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to X-ray","synonyms":[{"name":"regulation of cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:2000683"}


id: MONDO:0013185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leprosy in which the cause of the disease is a mutation in the TLR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy, susceptibility to, 5","secondary_identifiers":["MEDGEN:442551","OMIM:613223","UMLS:C2750733"],"synonyms":[{"name":"LPRS5","type":"related"},{"name":"TLR1 leprosy","type":"exact"},{"name":"leprosy caused by mutation in TLR1","type":"exact"},{"name":"leprosy, protection against","type":"related"},{"name":"leprosy, susceptibility to, 5","type":"exact"},{"name":"leprosy, susceptibility to, type 5","type":"exact"},{"name":"susceptibility to leprosy 5","type":"related"}],"termid":"MONDO:0013185","xrefs":{"Monarch":{"xref_id":"0013185"}}}


id: PBO:0005909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonate/alpha-ketoglutare dioxygenase (predicted)","termid":"PBO:0005909"}


id: FYECO:0000163
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which FITC-conjugated lectin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000163 FITC-conjugated lectin added (obsolete FYECO:0000163)","termid":"FYECO:0000163"}


id: GO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A tRNA exon ligation process in which the splice junction phosphate is derived from exogenous GTP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in the yeast Saccharomyces cerevisiae where the ligation reaction also produces a 2'-phosphate at the splice junction which is subsequently removed as part of the ligation process.","definition_xrefs":["PMID:18217203","PMID:9299409","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA exon ligation utilizing GTP as source of linkage phosphate (obsolete GO:0000970)","termid":"GO:0000970"}


id: PBO:0049982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIKESHI pseudogene 3","termid":"PBO:0049982"}


id: PATO:0000652
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000652 substance value (obsolete PATO:0000652)","termid":"PATO:0000652"}


id: MONDO:0008174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pachyonychia congenita in which the cause of the disease is a mutation in the KRT17 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pachyonychia congenita","termid":"MONDO:0016471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita 2","secondary_identifiers":["MEDGEN:314107","GARD:15103","OMIM:167210","UMLS:C1721007"],"synonyms":[{"name":"KRT17 pachyonychia congenita","type":"exact"},{"name":"PC2","type":"related"},{"name":"pachyonychia congenita 2","type":"exact"},{"name":"pachyonychia congenita caused by mutation in KRT17","type":"exact"},{"name":"pachyonychia congenita type 2","type":"exact"},{"name":"pachyonychia congenita, Jackson-Lawler type","type":"related"},{"name":"pachyonychia congenita, Jackson-Lawler type, formerly","type":"related"}],"termid":"MONDO:0008174","xrefs":{"Monarch":{"xref_id":"0008174"}}}


id: PBO:0110069
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as ortholog of human WDR54","termid":"PBO:0110069"}


id: MONDO:0005308
data:
  {"annotated_genes":["SJAG_00773","SJAG_01370","SJAG_04003","SJAG_03794"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060650"},{"annotations":[87341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014552"},{"annotations":[89151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014909"},{"annotations":[88746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"A genetic disorder of the cellular cilia or the cilia anchoring structures, the basal bodies, or of ciliary function.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_01370":null,"SJAG_03794":null,"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"ciliopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4277690","DOID:0060340","GTR:AN0966173","GARD:21544","Orphanet:363250","EFO:0003900","MEDGEN:908923"],"synonyms":[{"name":"ciliopathies","type":"related"},{"name":"ciliopathy","type":"exact"}],"termid":"MONDO:0005308","terms_by_termid":{"MONDO:0014552":null,"MONDO:0014909":null,"MONDO:0054565":null,"MONDO:0060650":null},"xrefs":{"Monarch":{"xref_id":"0005308"}}}


id: PBO:0059435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A5","termid":"PBO:0059435"}


id: PBO:0077452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 2","termid":"PBO:0077452"}


id: MONDO:0020156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic ankyloblepharon (obsolete MONDO:0020156)","secondary_identifiers":["Orphanet:98565"],"termid":"MONDO:0020156","xrefs":{"Monarch":{"xref_id":"0020156"}}}


id: MONDO:0800364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX12 defect","termid":"MONDO:0100266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005559","MONDO:0006025","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder, complementation group 3","secondary_identifiers":["MEDGEN:356508","UMLS:C1866340"],"synonyms":[{"name":"CG3","type":"exact"}],"termid":"MONDO:0800364","xrefs":{"Monarch":{"xref_id":"0800364"}}}


id: MONDO:0002762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of esophageal squamous cell carcinoma. It is an exophytic, cauliflower-like or papillary mass that can arise in any part of the esophagus. This variant of squamous cell carcinoma grows slowly and invades locally, with a very low metastasizing potential. (WHO)","definition_xrefs":["NCIT:C27420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal squamous cell carcinoma","termid":"MONDO:0005580"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophagus verrucous carcinoma","secondary_identifiers":["DOID:3747","MEDGEN:272594","UMLS:C1333470"],"synonyms":[{"name":"esophageal verrucous cancer","type":"exact"},{"name":"esophageal verrucous carcinoma","type":"exact"},{"name":"esophagus verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of esophagus","type":"exact"},{"name":"verrucous carcinoma of oesophagus","type":"exact"},{"name":"verrucous carcinoma of the esophagus","type":"exact"},{"name":"verrucous carcinoma of the oesophagus","type":"exact"}],"termid":"MONDO:0002762","xrefs":{"Monarch":{"xref_id":"0002762"}}}


id: PBO:0090951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha SNAP","termid":"PBO:0090951"}


id: PBO:0079477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWSG1 divergent transcript","termid":"PBO:0079477"}


id: PBO:0006186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_upstream_or_downstream_target","termid":"PBO:0006186"}


id: PBO:0085240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; has a potential role in the secretory pathway; CPR4 has a paralog, CPR8, that arose from the whole genome duplication","termid":"PBO:0085240"}


id: MONDO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin or Hodgkin lymphoma that arises in the brain or spinal cord as a primary lesion. There is no evidence of lymphoma outside the central nervous system at the time of diagnosis.","definition_xrefs":["NCIT:C9301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"central nervous system hematopoietic neoplasm","termid":"MONDO:0003641"},{"relation_name":"is_a","term_name":"neoplasm of mature B-cells","termid":"MONDO:0004949"},{"relation_name":"is_a","term_name":"primary organ-specific lymphoma","termid":"MONDO:0017207"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated lymphoproliferative disorder","termid":"MONDO:0017343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"primary central nervous system lymphoma","secondary_identifiers":["icd11.foundation:1133193893","SCTID:307649006","UMLS:C0280803","DOID:3234","GARD:9318","MedDRA:10036685","MONDO:0018732","ONCOTREE:PCNSL","Orphanet:46135","EFO:1000157","MEDGEN:79187","NORD:2002","ICD9:200.5"],"synonyms":[{"name":"CNS lymphoma","type":"exact"},{"name":"PCNSL","type":"exact"},{"name":"central nervous system lymphoma","type":"exact"},{"name":"lymphoma of central nervous system","type":"exact"},{"name":"malignant lymphomas of CNS","type":"exact"},{"name":"malignant lymphomas of the CNS","type":"exact"},{"name":"microglioma","type":"exact"},{"name":"primary CNS lymphoma","type":"exact"},{"name":"primary brain lymphoma","type":"exact"},{"name":"primary central nervous system lymphoma","type":"exact"},{"name":"primary lymphoma, CNS","type":"related"}],"termid":"MONDO:0002571","xrefs":{"Monarch":{"xref_id":"0002571"}}}


id: GO:0061314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell and contributing to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling involved in heart development","synonyms":[{"name":"Notch signalling involved in heart development","type":"exact"}],"termid":"GO:0061314"}


id: PR:Q10135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsd2 gene.","definition_xrefs":["UniProtKB:Q10135","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine-specific histone demethylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.02","synonyms":[{"name":"Spom972h-lsd2","type":"exact"}],"termid":"PR:Q10135"}


id: MONDO:0850231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A panniculitis that is characterized by sudden onset of painful, erythematous, subcutaneous nodules mainly localized to the pretibial areas. Lesions are usually bilateral and symmetrical, ranging from 1 to 5 cm in diameter.","definition_xrefs":["DOID:0080750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythema nodosum","secondary_identifiers":["ICD10CM:L52","ICD10WHO:L52","UMLS:C0014743","MEDGEN:41858","icd11.foundation:1628519266"],"termid":"MONDO:0850231","xrefs":{"Monarch":{"xref_id":"0850231"}}}


id: GO:0070492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oligosaccharide, a molecule with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"oligosaccharide binding","termid":"GO:0070492"}


id: PBO:0054219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1600","termid":"PBO:0054219"}


id: FYPO:0005506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mitochondrial transport mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Mitochondrial transport mRNAs are transcribed from genes whose products are involved in transport to or from the mitochondrion.","definition_xrefs":["PomBase:mah","PMID:23236291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of mitochondrial transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of mitochondrial transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of mitochondrial transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased mitochondrial transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0005506"}


id: FYPO:0002682
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005152"},{"annotations":[121249,121252,121244,121223,121238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show increased resistance to a chemical stimulus. Resistance to a chemical is usually measured by determining the maximum concentration of the chemical at which a population of cells grow and divide, and cells are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null},"genotype_count":6,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"increased resistance to chemical","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_01787","SJAG_04551"],"single_locus_genotype_uniquenames":["pck1delta","pck2delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pmk1delta"],"synonyms":[{"name":"resistance to chemicals: increased","type":"related"},{"name":"resistant to chemical","type":"exact"}],"termid":"FYPO:0002682","terms_by_termid":{"FYPO:0005152":null,"FYPO:0007521":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0011521
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactic acidosis, hyperglycinemia","termid":"PBO:0011521"}


id: MONDO:0030928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"},{"relation_name":"is_a","term_name":"autosomal dominant primary microcephaly","termid":"MONDO:0007988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"microcephaly 26, primary, autosomal dominant","secondary_identifiers":["UMLS:C5543048","GARD:16432","MEDGEN:1779629","OMIM:619179"],"synonyms":[{"name":"MCPH26","type":"exact"},{"name":"microcephaly 26, primary, autosomal dominant","type":"exact"}],"termid":"MONDO:0030928","xrefs":{"Monarch":{"xref_id":"0030928"}}}


id: FYPO:0003487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to ionizing radiation. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to ionizing radiation (obsolete FYPO:0003487)","synonyms":[{"name":"cut during cellular response to IR","type":"exact"},{"name":"cut during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003487"}


id: GO:1990961
data:
  {"annotated_genes":["SJAG_03951","SJAG_03363","SJAG_01145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59020,64974,119956],"is_not":false,"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"A process that reduces or removes the toxicity of a xenobiotic by exporting it outside the cell.","definition_xrefs":["PMID:28355133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic export from cell","termid":"GO:0046618"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"},{"relation_name":"part_of","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179","GO:0098754"],"is_obsolete":false,"name":"xenobiotic detoxification by transmembrane export across the plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"drug transmembrane export","type":"narrow"}],"termid":"GO:1990961","terms_by_termid":{"GO:1990961":null}}


id: GO:0006728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine metabolic process","termid":"GO:0019889"},{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042559"],"is_obsolete":false,"name":"pteridine biosynthetic process","synonyms":[{"name":"pteridine anabolism","type":"exact"},{"name":"pteridine biosynthesis","type":"exact"},{"name":"pteridine formation","type":"exact"},{"name":"pteridine synthesis","type":"exact"},{"name":"pterin biosynthesis","type":"narrow"},{"name":"pterin biosynthetic process","type":"narrow"}],"termid":"GO:0006728"}


id: PBO:0051307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR1-1 (pseudogene)","termid":"PBO:0051307"}


id: MONDO:0006334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian embryonal carcinoma (obsolete MONDO:0006334)","termid":"MONDO:0006334","xrefs":{"Monarch":{"xref_id":"0006334"}}}


id: GO:0033254
data:
  {"annotated_genes":["SJAG_01319","SJAG_03442","SJAG_01080"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74714,80483,108644],"is_not":false,"summary":null,"term":"GO:0033254"}]},"cv_name":"cellular_component","definition":"A protein complex that contains four related proteins that have been implicated in several membrane-related processes, such as sorting of H+-translocating ATPases, endocytosis, ER-Golgi trafficking, vacuole fusion, vacuolar polyphosphate homeostasis and the microautophagic scission of vesicles into the vacuolar lumen. The complex is enriched at the vacuolar membrane, but also found in other cellular compartments, including the ER and the cell periphery. In Saccharomyces, the subunits are Vtc1p, Vtc2p, Vtc3p and Vtc4p.","definition_xrefs":["PMID:17079729","PMID:34544285","PMID:11823419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01080":null,"SJAG_01319":null,"SJAG_03442":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"vacuolar transporter chaperone complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"VTC complex","type":"exact"}],"termid":"GO:0033254","terms_by_termid":{"GO:0033254":null}}


id: PR:O42908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A presequence protease, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11851:SF68","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial presequence protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.17","secondary_identifiers":["UniProtKB:O42908"],"synonyms":[{"name":"SPBC119.17","type":"related"},{"name":"Spom972h-PITRM1","type":"exact"}],"termid":"PR:O42908"}


id: PBO:0029975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_dephosphorylation_during_mitotic_G2/M_transition","termid":"PBO:0029975"}


id: PBO:0069167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 419, pseudogene","termid":"PBO:0069167"}


id: FYPO:0007170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype an ascus contains four nuclei, as in wild type.","definition_xrefs":["PMID:20826461","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal number of nuclei in ascus","termid":"FYPO:0007170"}


id: GO:0035225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of embryonic cells to the genital imaginal disc founder populations. Early in development at the blastoderm stage, the anlage of the genital disc of both sexes consists of three primordia: the female genital primoridum lcoated anteriorly, the anal primoridum located posteriorly, and the male gential primordium between the two.","definition_xrefs":["PMID:11494318","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of imaginal disc primordium","termid":"GO:0007445"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of genital disc primordium","termid":"GO:0035225"}


id: GO:0045543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gibberellin + 2-oxoglutarate + O2 = a 2-beta-hydroxygibberellin + succinate + CO2.","definition_xrefs":["EC:1.14.11.13","PMID:32652020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gibberellin 2-beta-dioxygenase activity","synonyms":[{"name":"gibberellin 2-beta-hydroxylase activity","type":"related"},{"name":"gibberellin 2-oxidase activity","type":"exact"},{"name":"gibberellin 2beta-dioxygenase activity","type":"related"},{"name":"gibberellin 2beta-hydroxylase activity","type":"related"}],"termid":"GO:0045543"}


id: MONDO:0007666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma-sleep apnea syndrome is characterized by sleep apnoea associated with glaucoma. It has been described in five members of a family (the mother and four of her children).","definition_xrefs":["Orphanet:2085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma-sleep apnea syndrome","secondary_identifiers":["MESH:C564232","GARD:2483","OMIM:137763","MEDGEN:330749","UMLS:C1842025"],"synonyms":[{"name":"glaucoma and sleep apnea","type":"related"},{"name":"glaucoma sleep apnea","type":"related"}],"termid":"MONDO:0007666","xrefs":{"Monarch":{"xref_id":"0007666"}}}


id: PBO:0113380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative kinase; suppressor of GTPase mutant; dosage-sensitive modulator of mitochondrial DNA (mtDNA) homeostasis; localizes to the mitochondrial matrix, and to the cytosol and clathrin-coated vesicles in HTP studies; similar to bovine rhodopsin kinase; may have a role in intracellular sterol transport","termid":"PBO:0113380"}


id: FYPO:0002343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing terbinafine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on terbinafine","synonyms":[{"name":"normal cell population growth in presence of terbinafine","type":"exact"},{"name":"normal cell population growth on terbinafine","type":"exact"},{"name":"normal cellular response to terbinafine","type":"related"},{"name":"normal vegetative cell population growth on terbinafine","type":"exact"}],"termid":"FYPO:0002343"}


id: GO:1903838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GO_REF:0000059","GOC:als","GOC:TermGenie","PMID:19575011"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA 3'-UTR binding (obsolete GO:1903838)","synonyms":[{"name":"down regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"downregulation of mRNA 3' UTR binding","type":"exact"},{"name":"downregulation of mRNA 3'-UTR binding","type":"exact"},{"name":"inhibition of mRNA 3' UTR binding","type":"narrow"},{"name":"inhibition of mRNA 3'-UTR binding","type":"narrow"},{"name":"negative regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903838"}


id: PBO:0057531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 647","termid":"PBO:0057531"}


id: FYPO:0003307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is higher than normal. The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PMID:22684255","PMID:11683392","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased mitotic index","termid":"FYPO:0003307"}


id: FYPO:0007098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing vanadate ions (VO4(3-)).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on vanadate","synonyms":[{"name":"normal cell population growth in presence of vanadate","type":"exact"},{"name":"normal cell population growth on vanadate","type":"exact"},{"name":"normal cell population growth on vanadate ions","type":"exact"},{"name":"normal growth on orthovanadate","type":"exact"},{"name":"normal growth on vanadate(3-)","type":"exact"},{"name":"normal growth on vanadium oxoanion","type":"broad"},{"name":"normal vegetative cell population growth on vanadate","type":"exact"}],"termid":"FYPO:0007098"}


id: PBO:0035885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-asymmetric_mitochondrial_aggregation","termid":"PBO:0035885"}


id: FYPO:0004422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation","termid":"FYPO:0004422"}


id: PBO:0039810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 1","termid":"PBO:0039810"}


id: PBO:0049155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1C","termid":"PBO:0049155"}


id: PBO:0068888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 129, pseudogene","termid":"PBO:0068888"}


id: MONDO:1012767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cancer that occurs in golden hamster due to a mutation in the TP53 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, TP53-related, golden hamster","secondary_identifiers":["OMIA:001990-10036"],"termid":"MONDO:1012767","xrefs":{"Monarch":{"xref_id":"1012767"}}}


id: GO:0045821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide catabolic process","termid":"GO:0033123"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of ATP metabolic process","termid":"GO:1903580"},{"relation_name":"positively_regulates","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006091","GO:0055086","GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glycolytic process","synonyms":[{"name":"activation of glycolysis","type":"narrow"},{"name":"stimulation of glycolysis","type":"narrow"},{"name":"up regulation of glycolysis","type":"exact"},{"name":"up-regulation of glycolysis","type":"exact"},{"name":"upregulation of glycolysis","type":"exact"}],"termid":"GO:0045821"}


id: GO:0036343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that combines cognitive functions and physical movement. For example, driving a car, throwing a ball, or playing a musical instrument.","definition_xrefs":["Wikipedia:Psychomotor_learning","GOC:pr","PMID:17159989","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor behavior","termid":"GO:0061744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"psychomotor behavior","termid":"GO:0036343"}


id: GO:0022879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + trehalose(out) = protein histidine + trehalose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0016740","GO:0003824","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-trehalose phosphotransferase system transporter activity","synonyms":[{"name":"trehalose PTS transporter activity","type":"exact"}],"termid":"GO:0022879"}


id: PBO:0005643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein (predicted)","termid":"PBO:0005643"}


id: PBO:0053204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 3","termid":"PBO:0053204"}


id: GO:0006312
data:
  {"annotated_genes":["SJAG_00640","SJAG_05105","SJAG_00247","SJAG_01601","SJAG_01076","SJAG_02460","SJAG_01419","SJAG_01677","SJAG_04530","SJAG_01410","SJAG_01495","SJAG_02724","SJAG_03898","SJAG_02339","SJAG_05173","SJAG_02828","SJAG_06642","SJAG_01832","SJAG_03097","SJAG_03221","SJAG_02267","SJAG_02226","SJAG_00995","SJAG_02079","SJAG_05353","SJAG_05239","SJAG_06597","SJAG_02556","SJAG_00757"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74202,77001,77673,79028,105820,109725],"is_not":false,"summary":null,"term":"GO:0006312"},{"annotations":[99369,112810,120783,102540,89877,91112,101069,108603,98128,110489,118800,117020,91239,112288,108036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007534"},{"annotations":[81251],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045951"},{"annotations":[97968],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071140"},{"annotations":[114939,114942,82098,113726,114940,114941,98134,114938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"}]},"cv_name":"biological_process","definition":"The exchange, reciprocal or nonreciprocal, of genetic material between one DNA molecule and a homologous DNA region that occurs during mitotic cell cycles.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_00640":null,"SJAG_00757":null,"SJAG_00995":null,"SJAG_01076":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02339":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03898":null,"SJAG_04530":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05239":null,"SJAG_05353":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"mitotic recombination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Mitotic_crossover"],"termid":"GO:0006312","terms_by_termid":{"GO:0000722":null,"GO:0006312":null,"GO:0007534":null,"GO:0045951":null,"GO:0071140":null}}


id: PBO:0012832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Septum Promoting GTPase","termid":"PBO:0012832"}


id: PBO:0073000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 2","termid":"PBO:0073000"}


id: GO:0030510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of BMP signaling pathway","secondary_identifiers":["GO:0090097"],"synonyms":[{"name":"regulation of BMP receptor signaling pathway","type":"related"},{"name":"regulation of BMP signalling pathway","type":"exact"},{"name":"regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"regulation of decapentaplegic signaling pathway","type":"narrow"}],"termid":"GO:0030510"}


id: PBO:0034342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-distributary_of","termid":"PBO:0034342"}


id: GO:0031666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031664"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"activation of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"positive regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"},{"name":"stimulation of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"up regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"up-regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"upregulation of lipopolysaccharide-mediated signaling pathway","type":"exact"}],"termid":"GO:0031666"}


id: GO:0035589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by an extracellular purine nucleotide binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:9755289","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purinergic nucleotide receptor signaling pathway","termid":"GO:0035590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled purinergic nucleotide receptor signaling pathway","synonyms":[{"name":"G-protein coupled purinergic nucleotide receptor signaling pathway","type":"exact"},{"name":"G-protein coupled purinergic nucleotide receptor signalling pathway","type":"exact"},{"name":"P2Y receptor signaling pathway","type":"exact"}],"termid":"GO:0035589"}


id: PBO:0038572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABR antisense RNA 1","termid":"PBO:0038572"}


id: GO:0008531
data:
  {"annotated_genes":["SJAG_04845"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74731],"is_not":false,"summary":null,"term":"GO:0008531"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + riboflavin = ADP + FMN + 2 H+.","definition_xrefs":["EC:2.7.1.26","RHEA:14357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"riboflavin kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00549","Reactome:R-HSA-196964","MetaCyc:RIBOFLAVINKIN-RXN"],"synonyms":[{"name":"ATP:riboflavin 5'-phosphotransferase activity","type":"related"},{"name":"FK","type":"related"},{"name":"flavokinase activity","type":"related"},{"name":"riboflavin kinase (phosphorylating)","type":"related"},{"name":"riboflavine kinase activity","type":"related"}],"termid":"GO:0008531","terms_by_termid":{"GO:0008531":null}}


id: MONDO:0000019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectodermal dysplasia (obsolete MONDO:0000019)","termid":"MONDO:0000019","xrefs":{"Monarch":{"xref_id":"0000019"}}}


id: GO:0090001
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101313],"is_not":false,"summary":null,"term":"GO:0090001"}]},"cv_name":"biological_process","definition":"A process that impedes the progress of the DNA replication fork at natural replication fork pausing sites within the eukaryotic tRNA transcription unit.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork arrest","termid":"GO:0043111"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"replication fork arrest at tRNA locus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090001","terms_by_termid":{"GO:0090001":null}}


id: _global:regulates_o_occurs_in
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that holds between a regulatory process and the entity which the regulated biological process or molecular function occurs in.","definition_xrefs":["GOC:dph","GOC:mtg_berkeley_2012_08_27","GOC:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_process_that_occurs_in","secondary_identifiers":["GOREL:0001004"],"synonyms":[{"name":"regulates_o_occurs_in","type":"exact"}],"termid":"_global:regulates_o_occurs_in"}


id: MONDO:0003857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary fibrous tumor/hemangiopericytoma, grade 3 that arises from the brain and occurs in the adult population.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","termid":"MONDO:0002176"},{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"malignant central nervous system mesenchymal, non-meningothelial neoplasm","termid":"MONDO:0037740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult intracranial malignant hemangiopericytoma","secondary_identifiers":["NCIT:C9183","MEDGEN:235288","UMLS:C1334558","DOID:6333"],"synonyms":[{"name":"adult intracranial anaplastic hemangiopericytoma","type":"exact"},{"name":"adult intracranial solitary fibrous tumor/hemangiopericytoma, grade 3","type":"exact"},{"name":"adult malignant intracranial hemangiopericytoma","type":"exact"},{"name":"central nervous system solitary fibrous tumor/hemangiopericytoma, grade 3","type":"exact"},{"name":"malignant adult intracranial hemangiopericytoma","type":"exact"}],"termid":"MONDO:0003857","xrefs":{"Monarch":{"xref_id":"0003857"}}}


id: MONDO:0032802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 37","secondary_identifiers":["UMLS:C4760307","DOID:0070601","MEDGEN:1676950","OMIM:618533"],"synonyms":[{"name":"DEAFNESS, AUTOSOMAL DOMINANT 37","type":"narrow"},{"name":"DFNA37","type":"narrow"},{"name":"deafness, autosomal dominant 37","type":"narrow"}],"termid":"MONDO:0032802","xrefs":{"Monarch":{"xref_id":"0032802"}}}


id: GO:1902364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["PMID:21131906","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to spindle pole body","synonyms":[{"name":"down regulation of protein localisation to spindle pole body","type":"exact"},{"name":"down regulation of protein localization to spindle pole body","type":"exact"},{"name":"down-regulation of protein localisation to spindle pole body","type":"exact"},{"name":"down-regulation of protein localization to spindle pole body","type":"exact"},{"name":"downregulation of protein localisation to spindle pole body","type":"exact"},{"name":"downregulation of protein localization to spindle pole body","type":"exact"},{"name":"inhibition of protein localisation to spindle pole body","type":"narrow"},{"name":"inhibition of protein localization to spindle pole body","type":"narrow"},{"name":"negative regulation of protein localisation to spindle pole body","type":"exact"}],"termid":"GO:1902364"}


id: GO:0002135
data:
  {"annotated_genes":["SJAG_02288","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89684,92799],"is_not":false,"summary":null,"term":"GO:0002135"}]},"cv_name":"molecular_function","definition":"Binding to CTP, cytidine 5'-triphosphate.","definition_xrefs":["GOC:hjd","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide binding","termid":"GO:0032557"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02288":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CTP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002135","terms_by_termid":{"GO:0002135":null}}


id: GO:0051419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to nebulin, a large protein (approximately 800kD) that is anchored at the Z-disc by its C-terminal region and spans the length of the thin filament, ending at the edge of the H-zone.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete nebulin binding (obsolete GO:0051419)","synonyms":[{"name":"nebulin binding","type":"exact"}],"termid":"GO:0051419"}


id: GO:0033329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving O-glucosylated derivatives of kaempferol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kaempferol O-glucoside metabolic process","synonyms":[{"name":"kaempferol O-glucoside metabolism","type":"exact"}],"termid":"GO:0033329"}


id: PBO:0069060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 307, pseudogene","termid":"PBO:0069060"}


id: PBO:0040453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP11A upstream neighbor lncRNA","termid":"PBO:0040453"}


id: PBO:0031850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_spores","termid":"PBO:0031850"}


id: GO:0004757
data:
  {"annotated_genes":["SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110501],"is_not":false,"summary":null,"term":"GO:0004757"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: 7,8-dihydrobiopterin + NADP+ = sepiapterin + NADPH + H+ and (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin + 2 NADP+ = 6-pyruvoyl-5,6,7,8-tetrahydropterin + 2 H+ + 2 NADPH.","definition_xrefs":["EC:1.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sepiapterin reductase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1475414","Reactome:R-HSA-1497869","MetaCyc:SEPIAPTERIN-REDUCTASE-RXN"],"synonyms":[{"name":"7,8-dihydrobiopterin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0004757","terms_by_termid":{"GO:0004757":null}}


id: SO:0001250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fingerprint_map is a physical map composed of restriction fragments.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"restriction_fragment","termid":"SO:0000412"},{"relation_name":"is_a","term_name":"fragment_assembly","termid":"SO:0001249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fingerprint_map","synonyms":[{"name":"BACmap","type":"exact"},{"name":"FPC","type":"exact"},{"name":"FPCmap","type":"exact"},{"name":"fingerprint map","type":"exact"},{"name":"restriction map","type":"exact"}],"termid":"SO:0001250"}


id: PBO:0067284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 366, pseudogene","termid":"PBO:0067284"}


id: PBO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphosphate synthetase, VTC complex subunit Vtc2/3 (predicted)","termid":"PBO:0018260"}


id: GO:0015176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall of bacteria, where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded, these enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some catalyze export of nucleases.","definition_xrefs":["TC:1.A.38.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete holin (obsolete GO:0015176)","synonyms":[{"name":"holin","type":"exact"}],"termid":"GO:0015176"}


id: PBO:0030129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_magnesium_level","termid":"PBO:0030129"}


id: MONDO:0022568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional tachycardia","secondary_identifiers":["MEDGEN:418944","UMLS:C2930902","MESH:C535438"],"synonyms":[{"name":"bidirectional ventricular tachycardia","type":"related"}],"termid":"MONDO:0022568","xrefs":{"Monarch":{"xref_id":"0022568"}}}


id: FYPO:0005107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of mitotic DNA replication initiation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal regulation of DNA replication","termid":"FYPO:0002995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal regulation of mitotic DNA replication initiation","synonyms":[{"name":"normal regulation of DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"normal regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"normal regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005107"}


id: PBO:0088433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex subunit Vps41","termid":"PBO:0088433"}


id: GO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of lysine, carried by a specialized lysine-accepting tRNA (possessing a CUA anticodon), to pyrrolysine (a lysine with an amide linkage to a (4R,5R)-4-substituted pyrroline-5-carboxylate).","definition_xrefs":["PMID:12029131","PMID:12121639","PMID:12029132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"conversion of lysyl-tRNA to pyrrolysyl-tRNA","termid":"GO:0001720"}


id: GO:0045827
data:
  {"annotated_genes":["SJAG_02380","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117481,113365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving isoprenoid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"negatively_regulates","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isoprenoid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of isoprenoid metabolic process","type":"exact"},{"name":"down-regulation of isoprenoid metabolic process","type":"exact"},{"name":"downregulation of isoprenoid metabolic process","type":"exact"},{"name":"inhibition of isoprenoid metabolic process","type":"narrow"},{"name":"negative regulation of isoprenoid metabolism","type":"exact"}],"termid":"GO:0045827","terms_by_termid":{"GO:2001211":null}}


id: PBO:0066165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding fox-1 homolog 2","termid":"PBO:0066165"}


id: PBO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 28","termid":"PBO:0070493"}


id: PR:Q9UTK9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTK9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase C144.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.17c","synonyms":[{"name":"Spom972h-SPAC144.17c","type":"exact"}],"termid":"PR:Q9UTK9"}


id: GO:0031470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle consisting of a proteinaceous coat and enzymes for the fixation of CO2. It augments the concentration of CO2 in the vicinity of RuBisCO to increase the efficiency of CO2 fixation under atmospheric conditions.","definition_xrefs":["GOC:js","PMID:8157606","PMID:8491708","PMID:28934381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial microcompartment","termid":"GO:0031469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"carboxysome","secondary_identifiers":["Wikipedia:Carboxysome"],"termid":"GO:0031470"}


id: PBO:0077951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 9-2","termid":"PBO:0077951"}


id: PBO:0085466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-mRNA splicing factor; facilitates the cooperative formation of U2/U6 helix II in association with stem II in the spliceosome, function may be regulated by Slu7p","termid":"PBO:0085466"}


id: GO:0005936
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The characteristic projection formed in response to mating pheromone by cells of Saccharomyces and other fungi with similar life cycles. Named after the Al Capp cartoon character, whose shape it resembles.","definition_xrefs":["GOC:mah","GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete shmoo (obsolete GO:0005936)","synonyms":[{"name":"shmoo","type":"exact"}],"termid":"GO:0005936"}


id: GO:0031407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any oxylipin, any of a group of biologically active compounds formed by oxidative metabolism of polyunsaturated fatty acids.","definition_xrefs":["PMID:11960741","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"oxylipin metabolic process","synonyms":[{"name":"oxylipin metabolism","type":"exact"}],"termid":"GO:0031407"}


id: MOD:01545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01545"}


id: GO:0033330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of O-glucosylated derivatives of kaempferol.","definition_xrefs":["MetaCyc:PWY-5320","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kaempferol O-glucoside metabolic process","termid":"GO:0033329"},{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kaempferol O-glucoside biosynthetic process","synonyms":[{"name":"kaempferol O-glucoside anabolism","type":"exact"},{"name":"kaempferol O-glucoside biosynthesis","type":"exact"},{"name":"kaempferol O-glucoside formation","type":"exact"},{"name":"kaempferol O-glucoside synthesit","type":"exact"}],"termid":"GO:0033330"}


id: PBO:0016964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster biogenesis protein Iba57 (predicted)","termid":"PBO:0016964"}


id: PBO:0068484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 65, pseudogene","termid":"PBO:0068484"}


id: PBO:0051914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1 binding protein 1","termid":"PBO:0051914"}


id: GO:0042497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide containing a nonprotein moiety consisting of three acyl groups.","definition_xrefs":["PMID:12524386","PMID:2757794","PMID:12077222","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopeptide binding","termid":"GO:0071723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"triacyl lipopeptide binding","synonyms":[{"name":"bacterial triacyl lipopeptide binding","type":"narrow"},{"name":"bacterial triacyl lipoprotein binding","type":"related"},{"name":"triacylated lipopeptide binding","type":"exact"}],"termid":"GO:0042497"}


id: GO:0047028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 6-lactoyl-5,6,7,8-tetrahydropterin = NADPH + H+ + 6-pyruvoyltetrahydropterin.","definition_xrefs":["MetaCyc:1.1.1.220-RXN","EC:1.1.1.220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin 2'-reductase activity","secondary_identifiers":["RHEA:11772"],"synonyms":[{"name":"6-lactoyl-5,6,7,8-tetrahydropterin:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"6-pyruvoyl tetrahydropterin (2'-oxo)reductase activity","type":"related"},{"name":"6-pyruvoyl-tetrahydropterin 2'-reductase activity","type":"related"},{"name":"6-pyruvoyltetrahydropterin reductase activity","type":"related"},{"name":"6PPH4(2'-oxo) reductase activity","type":"related"},{"name":"pyruvoyl-tetrahydropterin reductase activity","type":"related"}],"termid":"GO:0047028"}


id: PBO:0039436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and death domain containing 1A","termid":"PBO:0039436"}


id: PBO:0120150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"START transcriptional repressor; binds SBF (Swi4p-Swi6p) at SCB promoter elements in G1 to repress transcription; retains Cdc28-Cln3 at the ER and acts with Ydj1p to release Cln3p from the ER at critical size in a positive feedback loop to trigger START; unstable and degraded by SCF-Grr1 after hyperphosphorylation; contains a G1/S transcription factor binding (GTB) motif; binds SBF-regulated promoters in HU-treated cells; cell wall stress enhances repressor function; Cdc28p and Pho85p substrate","termid":"PBO:0120150"}


id: PBO:0034806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin (predicted)","termid":"PBO:0034806"}


id: GO:0090697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis, during the post-embryonic phase, of a plant tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"post-embryonic plant organ development","termid":"GO:0090696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"}


id: PBO:0049668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan binding protein 4","termid":"PBO:0049668"}


id: PBO:0091430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule","termid":"PBO:0091430"}


id: PBO:0042160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 21","termid":"PBO:0042160"}


id: MONDO:0014857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without anomalies of the brain, eye, or heart","secondary_identifiers":["GARD:17902","OMIM:616975","UMLS:C4310772","EFO:0009645","MEDGEN:934739","Orphanet:494344"],"synonyms":[{"name":"NEDBEH","type":"exact"},{"name":"neurodevelopmental disorder with or without anomalies of the brain, eye, or heart","type":"exact"},{"name":"neurodevelopmental disorder with or without anomalies of the brain, eye, or heart; NEDBEH","type":"exact"},{"name":"rere-related neurodevelopmental syndrome","type":"exact"}],"termid":"MONDO:0014857","xrefs":{"Monarch":{"xref_id":"0014857"}}}


id: GO:0090374
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77512],"is_not":false,"summary":null,"term":"GO:0090374"}]},"cv_name":"biological_process","definition":"The process in which an oligopeptide is transported out of the mitochondrial matrix. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["PMID:11251115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"oligopeptide export from mitochondrion","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0090374","terms_by_termid":{"GO:0090374":null}}


id: MONDO:1012939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any syndromic disease characterized by perinatal mortality that occurs in cattle due to a mutation in the GCK gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perinatal mortality syndrome, GCK-related, cattle","secondary_identifiers":["OMIA:002579-9913"],"termid":"MONDO:1012939","xrefs":{"Monarch":{"xref_id":"1012939"}}}


id: GO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a pathway not requiring TAP (transporter associated with antigen processing). The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","termid":"GO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","type":"exact"},{"name":"TAP-independent endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway, TAP-independent","type":"exact"}],"termid":"GO:0002490"}


id: PBO:0090059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic glutamate-tRNA ligase Gus1","termid":"PBO:0090059"}


id: PBO:0064312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 1","termid":"PBO:0064312"}


id: PBO:0072591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis regulator 1 homolog","termid":"PBO:0072591"}


id: PBO:0116669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL6 interacting reticulophagy regulator 1","termid":"PBO:0116669"}


id: FYPO:0005500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements does not occur during a cellular response to miconazole.","definition_xrefs":["PomBase:mah","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription from CRE promoter","termid":"FYPO:0005497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"abolished transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"abolished transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"abolished transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"},{"name":"expression of CRE target genes abolished during cellular response to miconazole","type":"related"},{"name":"transcription from CRE promoter abolished during cellular response to miconazole","type":"exact"}],"termid":"FYPO:0005500"}


id: GO:0031784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melatonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"melatonin receptor binding","synonyms":[{"name":"melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031784"}


id: PBO:0111425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo4","termid":"PBO:0111425"}


id: MONDO:0018878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Branchiootic syndrome is a rare, genetic multiple congenital anomalies syndrome characterized by second branchial arch anomalies (branchial cysts and fistulae), malformations of the outer, middle and inner ear associated with sensorineural, mixed or conductive hearing loss, and the absence of renal abnormalities. Typical ear findings consist of malformed auricles (e.g. lop or cupped ears), preauricular pits and/or tags, and middle and/or inner ear dysplasias (including cochlear, vestibular and semicircular channel hypoplasia, malformation of the ossicles and of middle ear space).","definition_xrefs":["Orphanet:52429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchiootic syndrome","secondary_identifiers":["SCTID:764810000","MEDGEN:1636666","OMIMPS:602588","DOID:0060232","GARD:10148","NANDO:1200675","UMLS:C4273131","MESH:C537104"],"synonyms":[{"name":"BOR","type":"exact"},{"name":"bo syndrome","type":"exact"},{"name":"bor","type":"exact"},{"name":"branchiootic dysplasia","type":"exact"}],"termid":"MONDO:0018878","xrefs":{"Monarch":{"xref_id":"0018878"}}}


id: GO:1903236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte tethering or rolling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:18308860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"regulates","term_name":"leukocyte tethering or rolling","termid":"GO:0050901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of leukocyte tethering or rolling","termid":"GO:1903236"}


id: PBO:0001795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2,A","termid":"PBO:0001795"}


id: MONDO:0100486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acne that occurs in an adult.","definition_xrefs":["MONDO:patterns/adult"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acne","termid":"MONDO:0011438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"adult acne","secondary_identifiers":["MEDGEN:348960","OMIM:604324","MESH:C565791","UMLS:C1858506"],"synonyms":[{"name":"acne, adult","type":"exact"}],"termid":"MONDO:0100486","xrefs":{"Monarch":{"xref_id":"0100486"}}}


id: PBO:0017803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic septin Spn1","termid":"PBO:0017803"}


id: GO:2001151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renal water transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal water transport","termid":"GO:0003097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of renal water transport","termid":"GO:2001151"}


id: PBO:0027020
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phytochelatin_absent_from_vacuole","termid":"PBO:0027020"}


id: PBO:0049930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hedgehog acyltransferase like","termid":"PBO:0049930"}


id: GO:1990221
data:
  {"annotated_genes":["SJAG_01063","SJAG_03862","SJAG_00894","SJAG_01238","SJAG_04397","SJAG_00186","SJAG_00532"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115869,94906,95133,105061,111661,65280,108848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099128"}]},"cv_name":"cellular_component","definition":"A protein complex capable of cysteine desulfurase activity decomposing L-cysteine to L-alanine and sulfur. It belongs to a ubiquitous family of pyridoxal 5-phosphate (PLP)-dependent enzymes.","definition_xrefs":["PMID:11827487","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase complex","termid":"GO:1990228"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_03862":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"L-cysteine desulfurase complex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"IscS","type":"narrow"},{"name":"NifS","type":"narrow"},{"name":"SufS complex","type":"narrow"}],"termid":"GO:1990221","terms_by_termid":{"GO:0099128":null}}


id: PBO:0050074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase","termid":"PBO:0050074"}


id: SOFP:orf_classification
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"gene call confidence flag","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf_classification","termid":"SOFP:orf_classification"}


id: PBO:0078293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta locus","termid":"PBO:0078293"}


id: FYPO:0006891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}


id: GO:0060210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase in which there is subsiding follicular function.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metestrus","termid":"GO:0060210"}


id: GO:0106321
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105431],"is_not":false,"summary":null,"term":"GO:0106321"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione + NADP+ = S-formylglutathione + NADPH + H+.","definition_xrefs":["RHEA:19981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity","termid":"GO:0051903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106321","terms_by_termid":{"GO:0106321":null}}


id: GO:1905070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an anterior visceral endoderm cell from one site to another.","definition_xrefs":["GO_REF:0000091","GOC:TermGenie","PMID:17078044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior visceral endoderm cell migration","termid":"GO:1905070"}


id: GO:0038066
data:
  {"annotated_genes":["SJAG_02342","SJAG_03384","SJAG_00117","SJAG_00318","SJAG_02945","SJAG_01199","SJAG_05000","SJAG_06622","SJAG_04777","SJAG_06592","SJAG_03893","SJAG_01587","SJAG_02000","SJAG_00027","SJAG_03903","SJAG_02013","SJAG_02592","SJAG_04825","SJAG_03185","SJAG_06621","SJAG_03828","SJAG_01718","SJAG_02135","SJAG_02183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59575,71960,75019,96318,103713,108244],"is_not":false,"summary":null,"term":"GO:0038066"},{"annotations":[96985,101391,120337,93616,119083,97923],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903753"},{"annotations":[114476,120300,110922,110918,97209,110917,119376,110919,110920,110921,110923,113812],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900745"}]},"cv_name":"biological_process","definition":"A MAPK cascade containing at least the p38MAPK (MAPK14) MAP kinase, or Hog1 in yeast. It starts with the activation of a MAP3K, and the consecutive activation of a MPK2K and of p38MAPK. The cascade can also contain an additional tier: the upstream MAP4K. The kinases in each tier phosphorylate and activate the kinases in the downstream tier. The p38MAPK cascade is activated by stress signals, including hyperosmolarity, as well as by G protein-coupled receptors, growth factors, and cytokines, and results in cellular responses such as cell proliferation, cell differentiation, apoptosis and inflammation.","definition_xrefs":["PMID:20811974","PMID:23125017","PMID:32794416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00117":null,"SJAG_00318":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01718":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03384":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_04777":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"p38MAPK cascade","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-450302"],"synonyms":[{"name":"MAPK14 cascade","type":"related"},{"name":"osmosensory signaling MAPK cascade","type":"narrow"},{"name":"p38 MAPK cascade","type":"exact"},{"name":"p38 cascade","type":"exact"}],"termid":"GO:0038066","terms_by_termid":{"GO:0038066":null,"GO:1900745":null,"GO:1903753":null}}


id: GO:0002353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions that takes place outside the cell occurring in response to tissue damage and initiated within blood plasma by the action of activated Factor XII (Hageman Factor) on prekallikrein to convert it to plasma kallikrein, and the subsequent reaction of plasma kallikrein with high molecular weight kininogen. The ultimate product of the plasma kallikrein-kinin cascade is bradykinin, an agent known to induce smooth muscle contraction, vasoconstriction, and increased vascular permeability.","definition_xrefs":["GOC:add","PMID:14501145","ISBN:0721601871","PMID:11842287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"}


id: GO:0097297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of an inactive cysteine-type endopeptidase involved in the execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of cysteine-type endopeptidase activity involved in execution phase of apoptosis (obsolete GO:0097297)","synonyms":[{"name":"activation of effector caspase activity","type":"narrow"}],"termid":"GO:0097297"}


id: GO:0008741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate.","definition_xrefs":["EC:2.7.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribulokinase activity","secondary_identifiers":["RHEA:22072","MetaCyc:RIBULOKIN-RXN"],"synonyms":[{"name":"ATP:L(or D)-ribulose 5-phosphotransferase activity","type":"related"},{"name":"L-ribulokinase activity","type":"exact"},{"name":"ribulokinase (phosphorylating)","type":"related"}],"termid":"GO:0008741"}


id: PBO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, truncated","termid":"PBO:0000144"}


id: GO:0099699
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of synaptic membrane (obsolete GO:0099699)","termid":"GO:0099699"}


id: MONDO:0010559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MASA syndrome (Mental retardation, Aphasia, Spastic paraplegia, Adducted thumbs) is a historical term used to describe a phenotype now considered to be part of the X-linked L1 clinical spectrum (L1 syndrome). MASA is characterized by mild to moderate intellectual deficit, delayed development of speech, hypotonia progressing to spasticity or spastic paraplegia, adducted thumbs, and mild to moderate distension of the cerebral ventricles.","definition_xrefs":["Orphanet:2466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"L1 syndrome","termid":"MONDO:0017140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"MASA syndrome","secondary_identifiers":["GARD:6986","UMLS:C0795953","MEDGEN:162894","SCTID:716996008","NCIT:C129930","icd11.foundation:1973644723","OMIM:303350","DOID:0060246"],"synonyms":[{"name":"CRASH syndrome","type":"related"},{"name":"CRASH syndrome, X-linked recessive","type":"related"},{"name":"Clasped thumb and intellectual disability","type":"related"},{"name":"Clasped thumb and mental retardation","type":"related"},{"name":"Gareis-Mason syndrome","type":"exact"},{"name":"MASA syndrome","type":"exact"},{"name":"X-linked complicated hereditary spastic paraplegia type 1","type":"exact"},{"name":"X-linked corpus callosum agenesis","type":"exact"},{"name":"X-linked spastic paraplegia 1","type":"exact"},{"name":"adducted thumb with intellectual disability","type":"related"},{"name":"adducted thumb with mental retardation","type":"related"},{"name":"hereditary spastic paraplegia 1","type":"exact"},{"name":"intellectual disability aphasia shuffling Gait adducted thumbs (MASA)","type":"related"},{"name":"intellectual disability, aphasia, shuffling Gait, and adducted thumbs","type":"related"},{"name":"intellectual disability-aphasia-shuffling gait-adducted thumbs syndrome","type":"exact"},{"name":"masa syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation aphasia shuffling Gait adducted thumbs (MASA)","type":"related"},{"name":"mental retardation, aphasia, shuffling Gait, and adducted thumbs","type":"related"},{"name":"spastic paraplegia 1","type":"related"},{"name":"spastic paraplegia 1, X-linked","type":"related"},{"name":"spastic paraplegia, X-linked","type":"exact"},{"name":"thumb congenital clasped with intellectual disability","type":"related"},{"name":"thumb congenital clasped with mental retardation","type":"related"},{"name":"thumb, congenital Clasped, with intellectual disability","type":"related"},{"name":"thumb, congenital Clasped, with mental retardation","type":"related"}],"termid":"MONDO:0010559","xrefs":{"Monarch":{"xref_id":"0010559"}}}


id: PBO:0120388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLXNC1 antisense RNA 1","termid":"PBO:0120388"}


id: MONDO:0010345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular albinism (obsolete MONDO:0010345)","termid":"MONDO:0010345","xrefs":{"Monarch":{"xref_id":"0010345"}}}


id: GO:0033436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"AUG codon-amino acid adaptor activity","synonyms":[{"name":"ATG codon-amino acid adaptor activity","type":"exact"},{"name":"initiator methionine tRNA","type":"related"},{"name":"methionine tRNA","type":"related"}],"termid":"GO:0033436"}


id: FYPO:0003432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to histone H3 methylated on the lysine at position 9 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal histone H3K9me binding","synonyms":[{"name":"normal K9-methylated histone H3 binding","type":"exact"},{"name":"normal methylated histone H3K9me binding","type":"exact"}],"termid":"FYPO:0003432"}


id: GO:1990610
data:
  {"annotated_genes":["SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65221],"is_not":false,"summary":null,"term":"GO:1990610"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of acetolactate synthase.","definition_xrefs":["PMID:8972574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"acetolactate synthase regulator activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:1990610","terms_by_termid":{"GO:1990610":null}}


id: SO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001432 sequence_variant_affecting_polyadenylation (obsolete SO:0001432)","synonyms":[{"name":"mutation affecting polyadenylation","type":"related"},{"name":"sequence variant affecting polyadenylation","type":"exact"}],"termid":"SO:0001432"}


id: GO:0072592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diatomic oxygen (O2).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxygen metabolic process","synonyms":[{"name":"diatomic oxygen metabolic process","type":"exact"},{"name":"oxygen metabolism","type":"exact"}],"termid":"GO:0072592"}


id: GO:2000412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell migration","termid":"GO:2000406"},{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"positively_regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymocyte migration","synonyms":[{"name":"positive regulation of immature T cell migration","type":"related"},{"name":"positive regulation of immature T lymphocyte migration","type":"related"},{"name":"positive regulation of immature T-cell migration","type":"related"},{"name":"positive regulation of immature T-lymphocyte migration","type":"related"},{"name":"positive regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000412"}


id: MONDO:0003134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A constellation of renal disorders characterized by an increase number of cells in the glomerulus; these disorders generally present with nephrotic syndrome, and generally progress to end stage renal failure over a matter of weeks to years, depending on the etiology. Examples include IgA nephropathy, membranoproliferative glomerulonephritis, and rapidly progressive glomerulonephritis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"proliferative glomerulonephritis","secondary_identifiers":["UMLS:C0235618","NCIT:C35281","DOID:4778","ICD9:583.0","SCTID:441815006","MEDGEN:68617"],"termid":"MONDO:0003134","xrefs":{"Monarch":{"xref_id":"0003134"}}}


id: GO:0033528
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78224],"is_not":false,"summary":null,"term":"GO:0033528"}]},"cv_name":"biological_process","definition":"A cyclic series of interconversions involving S-methyl-L-methionine, S-adenosyl-L-homocysteine, S-adenosyl-L-methionine, L-homocysteine, and L-methionine. Converts the methionine group of adenosylmethionine back to free methionine, and may serve regulate the cellular adenosylmethionine level.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methylmethionine metabolic process","termid":"GO:0033477"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-methylmethionine cycle","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0033528","terms_by_termid":{"GO:0033528":null}}


id: GO:0044525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-cystine residue in a protein by the addition of sulfur, to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jsg","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfhydration","termid":"GO:0044524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cystine sulfhydration","termid":"GO:0044525"}


id: GO:0032380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"regulates","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intracellular sterol transport","termid":"GO:0032380"}


id: PBO:0062356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily Q member 1","termid":"PBO:0062356"}


id: MONDO:0010838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital disorder characterized by the complete absence of gonadal tissue.","definition_xrefs":["NCIT:C27228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadal agenesis","secondary_identifiers":["UMLS:C0949331","OMIM:600171","MEDGEN:181797"],"synonyms":[{"name":"gonadal agenesis","type":"exact"}],"termid":"MONDO:0010838","xrefs":{"Monarch":{"xref_id":"0010838"}}}


id: PBO:0044673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDC antisense RNA 1","termid":"PBO:0044673"}


id: GO:0033368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protease is transported to, or maintained in, a location within a secretory granule in a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mast cell secretory granule","termid":"GO:0033367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protease localization to mast cell secretory granule","synonyms":[{"name":"protease localisation in mast cell secretory granule","type":"exact"},{"name":"protease localization in mast cell secretory granule","type":"exact"}],"termid":"GO:0033368"}


id: MONDO:0030914
data:
  {"annotated_genes":["SJAG_01900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87151],"is_not":false,"summary":null,"term":"MONDO:0030914"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Clark-Baraitser syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9994","OMIM:617752","MESH:C536208","DOID:0080234","OMIM:300602","MEDGEN:443983","Orphanet:600731","UMLS:C2931130"],"synonyms":[{"name":"Baraitser syndrome","type":"related"},{"name":"Clark-Baraitser syndrome","type":"exact"},{"name":"MRD49","type":"exact"},{"name":"autosomal dominant intellectual disability 49","type":"related"},{"name":"autosomal dominant mental retardation 49","type":"related"},{"name":"intellectual disability, autosomal dominant 49","type":"exact"},{"name":"intellectual disability, tall stature, obesity, macrocephaly and typical facial features","type":"related"},{"name":"mental retardation, autosomal dominant 49","type":"related"},{"name":"mental retardation, tall stature, obesity, macrocephaly and typical facial features","type":"related"}],"termid":"MONDO:0030914","terms_by_termid":{"MONDO:0030914":null},"xrefs":{"Monarch":{"xref_id":"0030914"}}}


id: PBO:0058485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5680","termid":"PBO:0058485"}


id: PBO:0062608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 3 pseudogene","termid":"PBO:0062608"}


id: FYPO:0001515
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"},{"annotations":[121450,121448,121449,121452],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"},{"relation_name":"is_a","term_name":"abnormal telomere localization to nuclear periphery","termid":"FYPO:0007418"},{"relation_name":"is_a","term_name":"abnormal chromosome region phenotype during vegetative growth","termid":"FYPO:0008382"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null,"SJAG_03892":null},"genotype_count":5,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomere tethering at nuclear periphery during vegetative growth","references_by_uniquename":{"PMID:24184107":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892","SJAG_01834","SJAG_03449"],"single_locus_genotype_uniquenames":["man1delta","vps4delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","pom152delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal mitotic telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"abnormal telomere anchoring at nuclear periphery during vegetative growth","type":"exact"},{"name":"abnormal telomere tethering at nuclear periphery during mitotic cell cycle","type":"related"},{"name":"abnormal telomere tethering to NE during vegetative growth","type":"exact"}],"termid":"FYPO:0001515","terms_by_termid":{"FYPO:0004890":null,"FYPO:0007770":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0070920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 28","termid":"PBO:0070920"}


id: PBO:0073441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratifin","termid":"PBO:0073441"}


id: PBO:0071146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 10","termid":"PBO:0071146"}


id: MONDO:0012156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by defects in postsynaptic neuromuscular junctions with early-onset progressive muscle weakness that has material basis in mutation in the CHRNA1 gene on chromosome 2q.","definition_xrefs":["PMID:10195214","PMID:15079006","PMID:25792100","DOID:0110662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 1A","termid":"MONDO:0011088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenic syndrome, congenital, 1B, fast-channel","secondary_identifiers":["GARD:15445","MEDGEN:909200","OMIM:608930","UMLS:C4225405"],"synonyms":[{"name":"CMS1B","type":"exact"},{"name":"congenital myasthenic syndrome 1B","type":"related"},{"name":"congenital myasthenic syndrome 1B, fast-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 1B","type":"exact"},{"name":"myasthenic syndrome, congenital, 1B, FAST-channel","type":"related"},{"name":"myasthenic syndrome, congenital, 1B, fast-channel","type":"exact"}],"termid":"MONDO:0012156","xrefs":{"Monarch":{"xref_id":"0012156"}}}


id: MONDO:0010249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked B cell surface antigen, mouse, homolog-like 1 (obsolete MONDO:0010249)","termid":"MONDO:0010249","xrefs":{"Monarch":{"xref_id":"0010249"}}}


id: GO:0097287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["GOC:yaf","PMID:364423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine metabolic process","synonyms":[{"name":"7-cyano-7-deazaguanine metabolism","type":"exact"}],"termid":"GO:0097287"}


id: GO:0140068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: crotonyl-CoA + histone = CoA + crotonyl-histone.","definition_xrefs":["PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide crotonyltransferase activity","termid":"GO:0140064"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone crotonyltransferase activity","termid":"GO:0140068"}


id: MONDO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ganglioneuroblastoma arising from the mediastinum.","definition_xrefs":["NCIT:C6627"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mediastinal cancer","termid":"MONDO:0005843"},{"relation_name":"is_a","term_name":"mediastinum neuroblastoma","termid":"MONDO:0001095"},{"relation_name":"is_a","term_name":"peripheral ganglioneuroblastoma","termid":"MONDO:0003327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum ganglioneuroblastoma","secondary_identifiers":["DOID:10661","MEDGEN:235308","UMLS:C1334653"],"synonyms":[{"name":"ganglioneuroblastoma (disease) of mediastinum","type":"exact"},{"name":"ganglioneuroblastoma of mediastinum","type":"exact"},{"name":"ganglioneuroblastoma of the mediastinum","type":"exact"},{"name":"mediastinal ganglioneuroblastoma","type":"exact"},{"name":"mediastinum ganglioneuroblastoma (disease)","type":"exact"}],"termid":"MONDO:0001096","xrefs":{"Monarch":{"xref_id":"0001096"}}}


id: MOD:01535
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01535"}


id: GO:0043710
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a solid substrate, via cell adhesion molecules, contributing to the formation of a biofilm composed of microorganisms of different species.","definition_xrefs":["GOC:jl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in biofilm formation","termid":"GO:0043708"},{"relation_name":"part_of","term_name":"multi-species biofilm formation","termid":"GO:0044399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in multi-species biofilm formation","synonyms":[{"name":"cell adhesion during multi-species biofilm formation","type":"related"}],"termid":"GO:0043710"}


id: PBO:0070242
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 182 pseudogene","termid":"PBO:0070242"}


id: PBO:0120182
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-subunit of geranylgeranyltransferase type III; required with β subunit Bet2p to transfer a geranylgeranyl group to mono-farnsylated Ykt6p, regulating membrane localization and its function in cell wall integrity and autophagy; involved in cell wall maintenance; functions in a regulatory pathway determining cell division readiness under stress; null is sensitive to osmotic stress and resistant to calcofluor white; structural and functional homolog of human GGTase-III α subunit PTAR1","termid":"PBO:0120182"}


id: MONDO:0016275
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenocarcinoma of cervix uteri (obsolete MONDO:0016275)","termid":"MONDO:0016275","xrefs":{"Monarch":{"xref_id":"0016275"}}}


id: GO:1903908
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id: PBO:0073298
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 20","termid":"PBO:0073298"}


id: GO:0061757
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id: PBO:0000412
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding (predicted)","termid":"PBO:0000412"}


id: MONDO:0002730
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney neoplasm that occurs during childhood.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"childhood kidney neoplasm","secondary_identifiers":["DOID:3675","MEDGEN:232356","UMLS:C1333003","NCIT:C6563"],"synonyms":[{"name":"childhood kidney neoplasm","type":"exact"},{"name":"childhood kidney tumor","type":"exact"},{"name":"childhood kidney tumour","type":"exact"},{"name":"childhood renal neoplasm","type":"exact"},{"name":"childhood renal tumor","type":"exact"},{"name":"childhood renal tumour","type":"exact"},{"name":"kidney neoplasm","type":"broad"},{"name":"kidney neoplasm of childhood","type":"exact"},{"name":"paediatric kidney neoplasm","type":"exact"},{"name":"paediatric kidney tumour","type":"exact"},{"name":"paediatric renal neoplasm","type":"exact"},{"name":"paediatric renal tumour","type":"exact"},{"name":"pediatric kidney neoplasm","type":"exact"},{"name":"pediatric kidney tumor","type":"exact"},{"name":"pediatric renal neoplasm","type":"exact"},{"name":"pediatric renal tumor","type":"exact"}],"termid":"MONDO:0002730","xrefs":{"Monarch":{"xref_id":"0002730"}}}


id: PBO:0027601
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_morphology","termid":"PBO:0027601"}


id: GO:0045702
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id: GO:0051254
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id: PBO:0044630
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id: GO:0021599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the abducens nerve. This process pertains to the initial formation of a structure from unspecified parts. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"abducens nerve morphogenesis","termid":"GO:0021598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve formation","synonyms":[{"name":"CN VI biosynthesis","type":"related"},{"name":"CN VI formation","type":"related"}],"termid":"GO:0021599"}


id: MONDO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy resulting from trauma.","definition_xrefs":["NCIT:C35542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traumatic encephalopathy","secondary_identifiers":["MEDGEN:536661","SCTID:230282000","icd11.foundation:1673722101","UMLS:C0236959"],"synonyms":[{"name":"dementia due to head trauma","type":"narrow"},{"name":"post-traumatic brain syndrome","type":"narrow"},{"name":"post-traumatic dementia","type":"narrow"},{"name":"traumatic encephalopathy","type":"exact"}],"termid":"MONDO:0043512","xrefs":{"Monarch":{"xref_id":"0043512"}}}


id: PBO:0087953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination and ribosome biogenesis factor; ATP binding cassette protein that cosediments with polysomes and is required for biogenesis of the small ribosomal subunit; Asn/Gln-rich rich region supports [NU+] prion formation and susceptibility to [PSI+] prion induction","termid":"PBO:0087953"}


id: PBO:0091965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf16","termid":"PBO:0091965"}


id: PBO:0084953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multistep regulator of cAMP-PKA signaling; inhibits PKA downstream of Gpa2p and Cyr1p, thereby increasing cAMP dependency; promotes ubiquitin-dependent proteolysis of Ira2p; regulated by G-alpha protein Gpa2p; GPB1 has a paralog, GPB2, that arose from the whole genome duplication","termid":"PBO:0084953"}


id: GO:0097694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of RNA to a specific location in the telomeric region of a chromosome.","definition_xrefs":["GOC:rph","GOC:BHF_telomere","PMID:26586433","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of RNA localization","termid":"GO:0051236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of RNA localization to telomere","synonyms":[{"name":"establishment of RNA localisation to telomere","type":"exact"}],"termid":"GO:0097694"}


id: PR:Q9UT02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec71 gene.","definition_xrefs":["UniProtKB:Q9UT02","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec71 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.01c","synonyms":[{"name":"Spom972h-sec71","type":"exact"}],"termid":"PR:Q9UT02"}


id: PBO:0018213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal small subunit Var1","termid":"PBO:0018213"}


id: GO:0019334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-cymene, 1-methyl-4-isopropylbenzene, one of the alkyl-substituted aromatic hydrocarbons found in volatile oils from over 100 plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"p-cymene catabolic process","secondary_identifiers":["MetaCyc:PWY-741"],"synonyms":[{"name":"p-cymene breakdown","type":"exact"},{"name":"p-cymene catabolism","type":"exact"},{"name":"p-cymene degradation","type":"exact"}],"termid":"GO:0019334"}


id: GO:0061218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mesonephros development. Mesonephros development is the process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"negatively_regulates","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesonephros development","termid":"GO:0061218"}


id: MONDO:0008430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia with delayed epiphyseal and carpal bone ossification","secondary_identifiers":["OMIM:182255","MESH:C566687","UMLS:C1866939","MEDGEN:356650"],"synonyms":[{"name":"skeletal dysplasia with delayed epiphyseal and carpal bone ossification","type":"exact"}],"termid":"MONDO:0008430","xrefs":{"Monarch":{"xref_id":"0008430"}}}


id: PBO:0084796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein involved in lipid homeostasis; involved in mobilization of CoQ from its site of synthesis on the inner mitochondrial membrane to other sites of action; associates with mitochondrial ribosome; involved in mitochondrial morphology; non-essential gene which interacts genetically with MDM10, and other members of ERMES complex; transcription is periodic during metabolic cycle; homologous to human aarF domain containing kinase, ADCK1","termid":"PBO:0084796"}


id: GO:0046987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer, in a beta 1,3 linkage, of D-glucuronic acid (GlcUA) from UDP-D-glucuronic acid to N-acetyllactosamine (galactosyl beta-1,4-N-acetylglucosamine).","definition_xrefs":["PMID:12511570","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"N-acetyllactosamine beta-1,3-glucuronosyltransferase activity","synonyms":[{"name":"galactosyl beta-1,4 N-acetylglucosamine beta-1,3 glucuronosyltransferase activity","type":"exact"}],"termid":"GO:0046987"}


id: GO:0015136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sialic acid from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"}


id: MONDO:0011676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PHACE is an acronym used to describe a syndrome characterized by the association of posterior fossa brain malformations, large facial haemangiomas, anatomical anomalies of the cerebral arteries, aortic coarctation and other cardiac anomalies, and eye abnormalities. Sternal anomalies are also sometimes present, and in these cases the syndrome is referred to as PHACES. Two additional manifestations have recently been added to the clinical spectrum of PHACE syndrome: stenosis of the vessels at the base of the skull and segmental longitudinal dilations of the internal carotid artery.","definition_xrefs":["Orphanet:42775"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neurovascular malformation (obsolete MONDO:0015145)","termid":"MONDO:0015145"},{"relation_name":"excluded_subClassOf","term_name":"obsolete vascular tumor with associated anomalies (obsolete MONDO:0018718)","termid":"MONDO:0018718"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic vascular tumor (obsolete MONDO:0018729)","termid":"MONDO:0018729"},{"relation_name":"excluded_subClassOf","term_name":"obsolete Moyamoya syndrome (obsolete MONDO:0018792)","termid":"MONDO:0018792"},{"relation_name":"excluded_subClassOf","term_name":"obsolete palpebral tumor with a vascular malformation (obsolete MONDO:0020182)","termid":"MONDO:0020182"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022","MONDO:0005267"],"is_obsolete":false,"name":"PHACE syndrome","secondary_identifiers":["UMLS:C1847874","GARD:8338","OMIM:606519","NORD:1927","icd11.foundation:1825849023","MedDRA:10068032","MEDGEN:376231"],"synonyms":[{"name":"P-CIIS","type":"related"},{"name":"PHACE association","type":"related"},{"name":"Phaces association","type":"related"},{"name":"Posterior fossa brain malformations, hemangiomas of the face, arterial anomalies, cardiac anomalies, and eye abnormalities","type":"related"},{"name":"aortic aneurysm, giant congenital","type":"related"},{"name":"pascual-Castroviejo syndrome type 2","type":"exact"},{"name":"pascual-Castroviejo type II syndrome","type":"related"}],"termid":"MONDO:0011676","xrefs":{"Monarch":{"xref_id":"0011676"}}}


id: GO:1901597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbendazim","termid":"GO:1901597"}


id: GO:0160205
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62379],"is_not":false,"summary":null,"term":"GO:0160205"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [ADP-thiazole synthase]-L-cysteine + glycine + NAD(+) = [ADP-thiazole synthase]-dehydroalanine + ADP-5-ethyl-4-methylthiazole-2-carboxylate + 2 H(+) + 3 H2O + nicotinamide.","definition_xrefs":["RHEA:55708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"cysteine-dependent adenosine diphosphate thiazole synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.4.2.60"],"synonyms":[{"name":"ADP-thiazole synthase activity","type":"related"},{"name":"suicide thiamine thiazole synthase activity","type":"exact"}],"termid":"GO:0160205","terms_by_termid":{"GO:0160205":null}}


id: PBO:0042154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCL15-CCL14 readthrough (NMD candidate)","termid":"PBO:0042154"}


id: MONDO:0009659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme galactosamine-6-sulfatase. It is characterized by skeletal and central nervous system deficits.","definition_xrefs":["NCIT:C84901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 4","termid":"MONDO:0018938"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis type 4A","secondary_identifiers":["OMIM:253000","NANDO:1200106","DOID:0111391","NANDO:2201178","GARD:3785","Orphanet:309297","ICD10CM:E76.210","UMLS:C0086651","icd11.foundation:1919173641","SCTID:7259005","MEDGEN:43375"],"synonyms":[{"name":"GALNS deficiency","type":"exact"},{"name":"MPS 4A","type":"related"},{"name":"MPS IV A","type":"exact"},{"name":"MPS IVA","type":"related"},{"name":"MPS4A","type":"exact"},{"name":"MPSIVA","type":"exact"},{"name":"Morquio A disease","type":"broad"},{"name":"Morquio disease type A","type":"exact"},{"name":"Morquio syndrome A","type":"exact"},{"name":"N-acetylgalactosamine-6-sulfate sulfatase deficiency","type":"exact"},{"name":"galactosamine-6-sulfatase deficiency","type":"exact"},{"name":"mucopolysaccharidosis IVA","type":"exact"},{"name":"mucopolysaccharidosis type 4A","type":"exact"},{"name":"mucopolysaccharidosis type IVA","type":"exact"},{"name":"mucopolysaccharidosis, type 4A","type":"related"},{"name":"mucopolysaccharidosis, type IVA","type":"related"}],"termid":"MONDO:0009659","xrefs":{"Monarch":{"xref_id":"0009659"}}}


id: MONDO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by a fungus.","definition_xrefs":["NCIT:C3245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal infectious disease","secondary_identifiers":["ICD10CM:B35-B49","ICD9:117.9","DOID:1564","MESH:D009181","UMLS:C0026946","ICD9:110-118","MEDGEN:6486","SCTID:3218000"],"synonyms":[{"name":"Fungi caused disease or disorder","type":"exact"},{"name":"Fungi disease or disorder","type":"exact"},{"name":"Fungi infection","type":"exact"},{"name":"Fungi infectious disease","type":"exact"},{"name":"fungal infection","type":"related"},{"name":"infection, fungal","type":"related"},{"name":"infections, Fungi","type":"related"},{"name":"mycoses","type":"related"},{"name":"mycosis","type":"exact"}],"termid":"MONDO:0002041","xrefs":{"Monarch":{"xref_id":"0002041"}}}


id: PBO:0041963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 6","termid":"PBO:0041963"}


id: PBO:0076221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit","termid":"PBO:0076221"}


id: GO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bone mineralization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ossification","termid":"GO:0030279"},{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"negatively_regulates","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone mineralization","synonyms":[{"name":"down regulation of bone mineralization","type":"exact"},{"name":"down-regulation of bone mineralization","type":"exact"},{"name":"downregulation of bone mineralization","type":"exact"},{"name":"inhibition of bone mineralization","type":"narrow"}],"termid":"GO:0030502"}


id: PBO:0091400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A catalytic subunit Ppa1","termid":"PBO:0091400"}


id: PBO:0059530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded termination associated sequence","termid":"PBO:0059530"}


id: GO:0034594
data:
  {"annotated_genes":["SJAG_00063","SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016314"},{"annotations":[110282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol trisphosphate + H2O = phosphatidylinositol bisphosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol trisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034594","terms_by_termid":{"GO:0016314":null,"GO:0034485":null}}


id: GO:0035711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a T-helper 1 cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["CL:0000545","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell activation","synonyms":[{"name":"Th1 cell activation","type":"exact"}],"termid":"GO:0035711"}


id: PBO:0030118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_zinc_ion","termid":"PBO:0030118"}


id: GO:0004263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Tyr-Xaa > Trp-Xaa > Phe-Xaa > Leu-Xaa.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete chymotrypsin activity (obsolete GO:0004263)","synonyms":[{"name":"alpha-chymar","type":"related"},{"name":"alpha-chymar ophth","type":"related"},{"name":"alpha-chymotrypsin A","type":"related"},{"name":"alpha-chymotrypsin activity","type":"narrow"},{"name":"avazyme","type":"related"},{"name":"chymar","type":"related"},{"name":"chymotest","type":"related"},{"name":"chymotrypsin A activity","type":"narrow"},{"name":"chymotrypsin B activity","type":"narrow"},{"name":"chymotrypsin activity","type":"exact"},{"name":"chymotrypsins A and B","type":"related"},{"name":"enzeon","type":"related"},{"name":"quimar","type":"related"},{"name":"quimotrase activity","type":"related"}],"termid":"GO:0004263"}


id: MONDO:0011477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any tooth agenesis in which the cause of the disease is a mutation in the PAX9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, 3","secondary_identifiers":["UMLS:C1970291","MEDGEN:410035","MESH:C567036","GARD:18247","OMIM:604625"],"synonyms":[{"name":"PAX9 tooth agenesis","type":"exact"},{"name":"STHAG3","type":"related"},{"name":"hypodontia/oligodontia 3","type":"related"},{"name":"tooth agenesis caused by mutation in PAX9","type":"exact"},{"name":"tooth agenesis, selective, 3","type":"exact"},{"name":"tooth agenesis, selective, type 3","type":"exact"}],"termid":"MONDO:0011477","xrefs":{"Monarch":{"xref_id":"0011477"}}}


id: PBO:0062283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 7 pseudogene","termid":"PBO:0062283"}


id: MONDO:0021056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any attenuated familial adenomatous polyposis in which the cause of the disease is a mutation in the APC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attenuated familial adenomatous polyposis","termid":"MONDO:0016362"},{"relation_name":"is_a","term_name":"classic familial adenomatous polyposis","termid":"MONDO:0021055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis 1","secondary_identifiers":["MEDGEN:398651","DOID:0080409","OMIM:175100","UMLS:C2713442"],"synonyms":[{"name":"APC attenuated familial adenomatous polyposis","type":"exact"},{"name":"FAP1","type":"exact"},{"name":"Gardner syndrome","type":"related"},{"name":"adenoma, periampullary, somatic","type":"exact"},{"name":"adenomatous polyposis coli","type":"broad"},{"name":"adenomatous polyposis coli, attenuated","type":"related"},{"name":"adenomatous polyposis of the colon","type":"related"},{"name":"attenuated familial adenomatous polyposis caused by mutation in APC","type":"exact"},{"name":"brain tumor-polyposis syndrome 2","type":"related"},{"name":"familial adenomatous polyposis 1","type":"exact"},{"name":"familial adenomatous polyposis, attenuated","type":"related"},{"name":"familial polyposis of the colon","type":"related"},{"name":"polyposis, adenomatous intestinal","type":"related"}],"termid":"MONDO:0021056","xrefs":{"Monarch":{"xref_id":"0021056"}}}


id: PBO:0040341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit e","termid":"PBO:0040341"}


id: PBO:0080630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 77","termid":"PBO:0080630"}


id: MONDO:0022736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"occupational disorder","termid":"MONDO:0100366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupational lung disease","secondary_identifiers":["ICD9:508.9","SCTID:86157004","UMLS:C0264421","MEDGEN:538557"],"synonyms":[{"name":"Occupational inhalation disease","type":"related"},{"name":"Occupational lung disease","type":"related"},{"name":"Occupational lung disorder","type":"related"},{"name":"Occupational pulmonary disease","type":"related"},{"name":"Occupational respiratory disease","type":"related"}],"termid":"MONDO:0022736","xrefs":{"Monarch":{"xref_id":"0022736"}}}


id: PBO:0110353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4B-CDC7 kinase regulatory subunit","termid":"PBO:0110353"}


id: MONDO:0021029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of sebaceous gland anomaly that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary epidermal appendage anomaly","termid":"MONDO:0021026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary sebaceous gland anomaly","secondary_identifiers":["MEDGEN:1843175","GARD:20268","UMLS:C5680577","Orphanet:183460"],"synonyms":[{"name":"genetic sebaceous gland anomaly","type":"exact"}],"termid":"MONDO:0021029","xrefs":{"Monarch":{"xref_id":"0021029"}}}


id: GO:1905331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of morphogenesis of an epithelium.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25745997","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"negatively_regulates","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of morphogenesis of an epithelium","synonyms":[{"name":"down regulation of epithelium morphogenesis","type":"exact"},{"name":"down regulation of morphogenesis of an epithelium","type":"exact"},{"name":"down-regulation of epithelium morphogenesis","type":"exact"},{"name":"down-regulation of morphogenesis of an epithelium","type":"exact"},{"name":"downregulation of epithelium morphogenesis","type":"exact"},{"name":"downregulation of morphogenesis of an epithelium","type":"exact"},{"name":"inhibition of epithelium morphogenesis","type":"narrow"},{"name":"inhibition of morphogenesis of an epithelium","type":"narrow"},{"name":"negative regulation of epithelium morphogenesis","type":"exact"}],"termid":"GO:1905331"}


id: PBO:0038910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E5","termid":"PBO:0038910"}


id: PBO:0086724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-tagged protein is detected in highly purified mitochondria in high-throughput studies; contains a PH domain and binds phosphatidylinositols and phosphatidylethanolamine in a large-scale study; YNL144C has a paralog, YHR131C, that arose from the whole genome duplication","termid":"PBO:0086724"}


id: PBO:0076536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 63 pseudogene","termid":"PBO:0076536"}


id: PBO:0044792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 5","termid":"PBO:0044792"}


id: PBO:0059455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 5","termid":"PBO:0059455"}


id: MONDO:0957210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurooculorenal syndrome","secondary_identifiers":["MEDGEN:1841013","OMIM:620305","UMLS:C5830377"],"termid":"MONDO:0957210","xrefs":{"Monarch":{"xref_id":"0957210"}}}


id: GO:0018951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving p-xylene, (1,4-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete p-xylene metabolic process (obsolete GO:0018951)","synonyms":[{"name":"p-xylene metabolism","type":"exact"},{"name":"para-xylene metabolic process","type":"exact"},{"name":"para-xylene metabolism","type":"exact"}],"termid":"GO:0018951"}


id: FYPO:0004701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a cell does not alter the timing or rate of cell division when shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PomBase:mah","PMID:872891","PMID:689088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"abolished cell division timing change upon nitrogen source shift","synonyms":[{"name":"abolished cell division rate change upon nitrogen source shift","type":"related"},{"name":"abolished change in cell division rate upon nitrogen source shift","type":"related"},{"name":"abolished change in cell division timing upon nitrogen source shift","type":"exact"},{"name":"abolished nutritional modulation of cell division","type":"related"},{"name":"unchanged cell division timing upon nitrogen source shift","type":"related"}],"termid":"FYPO:0004701"}


id: MONDO:0019346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialidosis type 1 (ST-1) is a very rare lysosomal storage disease, and is the normosomatic form of sialidosis, characterized by gait abnormalities, progressive visual loss, bilateral macular cherry red spots and myoclonic epilepsy and ataxia, that usually presents in the second to third decade of life.","definition_xrefs":["Orphanet:812"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"sialidosis","termid":"MONDO:0017734"},{"relation_name":"is_a","term_name":"familial mucolipidosis","termid":"MONDO:0031422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"sialidosis type 1","secondary_identifiers":["MEDGEN:44174","SCTID:723675006","UMLS:C0023806","SCTID:34960006","icd11.foundation:1154773192","NANDO:1200117","NANDO:2201191","GARD:7639"],"synonyms":[{"name":"Normomorphic sialidosis","type":"exact"},{"name":"cherry red spot myoclonus syndrome","type":"related"},{"name":"cherry-red spot-myoclonus syndrome","type":"exact"},{"name":"lipomucopolysaccharidosis","type":"exact"},{"name":"myoclonus cherry red spot syndrome","type":"related"},{"name":"normosomatic sialidosis","type":"exact"},{"name":"sialidosis type I","type":"related"}],"termid":"MONDO:0019346","xrefs":{"Monarch":{"xref_id":"0019346"}}}


id: MONDO:0004713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a gingiva of lower jaw.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival cancer","termid":"MONDO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"lower gum cancer","secondary_identifiers":["UMLS:C0432581","DOID:9125","MEDGEN:609602","ICD9:143.1","SCTID:363384006"],"synonyms":[{"name":"cancer of gingiva of lower jaw","type":"exact"},{"name":"gingiva of lower jaw cancer","type":"exact"},{"name":"malignant gingiva of lower jaw neoplasm","type":"exact"},{"name":"malignant neoplasm of gingiva of lower jaw","type":"exact"},{"name":"malignant tumor of lower gingiva","type":"exact"},{"name":"malignant tumor of lower gum","type":"exact"},{"name":"malignant tumour of lower gingiva","type":"exact"},{"name":"malignant tumour of lower gum","type":"exact"}],"termid":"MONDO:0004713","xrefs":{"Monarch":{"xref_id":"0004713"}}}


id: MONDO:0004689
data:
  {"annotated_genes":["SJAG_02399","SJAG_03371","SJAG_02117","SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011417"},{"annotations":[87509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[87367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010651"},{"annotations":[86910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"},{"annotations":[89078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010200"}]},"cv_name":"mondo","definition":"An inherited metabolic disorder that involves metabolic disturbances in the processing or distribution of dietary minerals.","definition_xrefs":["DOID:896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02117":null,"SJAG_02399":null,"SJAG_03371":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn metal metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6325","UMLS:C0025534","MESH:D008664"],"synonyms":[{"name":"metal metabolism disorder","type":"broad"},{"name":"metal metabolism, inborn error","type":"related"}],"termid":"MONDO:0004689","terms_by_termid":{"MONDO:0010200":null,"MONDO:0010651":null,"MONDO:0011301":null,"MONDO:0011417":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0004689"}}}


id: PBO:0029450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_galactomannan_level","termid":"PBO:0029450"}


id: MONDO:0010645
data:
  {"annotated_genes":["SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89171],"is_not":false,"summary":null,"term":"MONDO:0010645"}]},"cv_name":"mondo","definition":"Oculocerebrorenal syndrome of Lowe (OCRL) is a multisystem disorder characterized by congenital cataracts, glaucoma, intellectual disabilities, postnatal growth retardation and renal tubular dysfunction with chronic renal failure.","definition_xrefs":["Orphanet:534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"oculocerebrorenal syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:79385002","GARD:3295","DOID:1056","icd11.foundation:1392767390","NORD:1379","UMLS:C0028860","NCIT:C84940","OMIM:309000","ICD9:270.8","MEDGEN:18145","MESH:D009800","NANDO:2100028","NANDO:2200188","MedDRA:10051707"],"synonyms":[{"name":"Lowe disease","type":"exact"},{"name":"Lowe oculo-cerebro-renal syndrome","type":"exact"},{"name":"Lowe oculocerebrorenal syndrome","type":"exact"},{"name":"Lowe syndrome","type":"exact"},{"name":"Lowe syndrome, X-linked recessive","type":"exact"},{"name":"OCR","type":"exact"},{"name":"OCRL","type":"exact"},{"name":"Ocrl1","type":"related"},{"name":"oculo-cerebro-renal dystrophy","type":"exact"},{"name":"oculo-cerebro-renal syndrome","type":"exact"},{"name":"oculocerebrorenal dystrophy","type":"exact"},{"name":"oculocerebrorenal syndrome","type":"exact"},{"name":"oculocerebrorenal syndrome of Lowe","type":"exact"},{"name":"phosphatidylinositol 4,5-biphosphate 5-phosphatase deficiency","type":"exact"},{"name":"phosphatidylinositol 4,5-bisphosphate 5-phosphatase deficiency","type":"related"}],"termid":"MONDO:0010645","terms_by_termid":{"MONDO:0010645":null},"xrefs":{"Monarch":{"xref_id":"0010645"}}}


id: GO:0052679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: terpentedienyl diphosphate = diphosphate + terpentetriene.","definition_xrefs":["RHEA:25617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"terpentetriene synthase activity","secondary_identifiers":["EC:4.2.3.36","MetaCyc:RXN-9455"],"synonyms":[{"name":"terpentedienyl-diphosphate diphosphate-lyase (terpentetriene-forming) activity","type":"exact"}],"termid":"GO:0052679"}


id: PR:Q9Y7L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC685.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C685.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.03","synonyms":[{"name":"Spom972h-SPBC685.03","type":"exact"}],"termid":"PR:Q9Y7L5"}


id: PBO:0066029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 20 pseudogene","termid":"PBO:0066029"}


id: PBO:0028650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rRNA_precursor_level","termid":"PBO:0028650"}


id: MONDO:0015787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hemophilia A that manifests in some women with mutations in the F8 gene (Xq28), encoding coagulation factor VIII.","definition_xrefs":["Orphanet:177926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A","termid":"MONDO:0010602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"symptomatic form of hemophilia A in female carriers","secondary_identifiers":["GARD:17076","MEDGEN:1843218","UMLS:C5680504"],"termid":"MONDO:0015787","xrefs":{"Monarch":{"xref_id":"0015787"}}}


id: FYPO:0003709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype in which cells adhere to other cells of compatible mating type less strongly or to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased agglutination","synonyms":[{"name":"decreased agglutination involved in conjugation with cellular fusion","type":"exact"},{"name":"reduced agglutination","type":"exact"}],"termid":"FYPO:0003709"}


id: GO:0070304
data:
  {"annotated_genes":["SJAG_03969","SJAG_00424","SJAG_03705","SJAG_00610","SJAG_01787","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69564,91384,90029,92715,94365,119909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the stress-activated protein kinase signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated protein kinase signaling cascade","termid":"GO:0070302"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_03969":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of stress-activated protein kinase signaling cascade","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"activation of stress-activated protein kinase signaling pathway","type":"narrow"},{"name":"positive regulation of SAPK signaling pathway","type":"exact"},{"name":"positive regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"positive regulation of stress-activated protein kinase signalling pathway","type":"exact"},{"name":"stimulation of stress-activated protein kinase signaling pathway","type":"narrow"},{"name":"up regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"up-regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"upregulation of stress-activated protein kinase signaling pathway","type":"exact"}],"termid":"GO:0070304","terms_by_termid":{"GO:1903139":null}}


id: MOD:00800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and a one-vanadium seven-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide.","definition_xrefs":["PubMed:2345152","RESID:AA0393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide","synonyms":[{"name":"CysHis-[V7Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-vanadium cofactor","type":"exact"}],"termid":"MOD:00800"}


id: PBO:0074081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 52","termid":"PBO:0074081"}


id: PBO:0120266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC4 antisense RNA 3","termid":"PBO:0120266"}


id: GO:1904035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell apoptotic process.","definition_xrefs":["GO_REF:0000058","PMID:19137015","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell apoptotic process","synonyms":[{"name":"regulation of epithelial cell apoptosis","type":"narrow"},{"name":"regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"regulation of epitheliocyte apoptotic process","type":"exact"}],"termid":"GO:1904035"}


id: FYPO:0008236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An RNA localization phenotype where the loading of siRNAs onto the RITs complex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA localization to chromatin","termid":"FYPO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal siRNA loading onto RITS complex","termid":"FYPO:0008236"}


id: PBO:0066633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab interacting lysosomal protein like 2","termid":"PBO:0066633"}


id: FYPO:0005732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which arginase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal arginase activity","termid":"FYPO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished arginase activity","synonyms":[{"name":"arginase activity abolished","type":"exact"}],"termid":"FYPO:0005732"}


id: PATO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A strength which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"strength","termid":"PATO:0001230"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased strength","synonyms":[{"name":"weak","type":"exact"}],"termid":"PATO:0001779"}


id: GO:0047404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 3-D-glucuronosyl-N2-,6-disulfo-beta-D-glucosamine = glucuronate + N2,6-disulfo-D-glucosamine.","definition_xrefs":["EC:3.2.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucuronosyl-disulfoglucosamine glucuronidase activity","secondary_identifiers":["MetaCyc:RXN-16484","RHEA:15073"],"synonyms":[{"name":"3-D-glucuronsyl-2-N,6-disulfo-beta-D-glucosamine glucuronohydrolase activity","type":"related"},{"name":"3-D-glucuronsyl-N2,6-disulfo-beta-D-glucosamine glucuronohydrolase activity","type":"related"},{"name":"glucuronosyl-disulphoglucosamine glucuronidase activity","type":"exact"}],"termid":"GO:0047404"}


id: GO:1901222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the non-canonical NF-kappaB signaling cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"non-canonical NF-kappaB signal transduction","termid":"GO:0038061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of non-canonical NF-kappaB signal transduction","secondary_identifiers":["GO:0042348","GO:0042345"],"synonyms":[{"name":"NF-KB import into nucleus","type":"narrow"},{"name":"NF-kappaB import into nucleus","type":"narrow"},{"name":"regulation of NF-kappaB import into nucleus","type":"narrow"},{"name":"regulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"regulation of NIK/NF-kappaB signaling","type":"exact"},{"name":"regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"regulation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"regulation of p52-dependent NF-kappaB signaling","type":"narrow"}],"termid":"GO:1901222"}


id: GO:0004486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NAD(P)+ = 5,10-methenyltetrahydrofolate + NAD(P)H + H+.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity (obsolete GO:0004486)","synonyms":[{"name":"5,10-methylene-THF dehydrogenase activity","type":"exact"},{"name":"N5,N10-methylenetetrahydrofolate dehydrogenase activity","type":"related"}],"termid":"GO:0004486"}


id: PBO:0030584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_arginine_level","termid":"PBO:0030584"}


id: PBO:0075392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp5 transcription factor","termid":"PBO:0075392"}


id: PBO:0121061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20 antisense RNA 1","termid":"PBO:0121061"}


id: PBO:0028736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-L-selenoneine_absent_from_cell","termid":"PBO:0028736"}


id: FYPO:0000145
data:
  {"alleles_by_uniquename":{"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_03360:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03360","name":"shc1delta","uniquename":"SJAG_03360:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[121473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[121129,121128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006545"},{"annotations":[121487,121582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the regulation of a molecular function, biological process, or biological quality.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00871":null,"SJAG_01330":null,"SJAG_03360":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":5,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"erg1delta":{"display_name":"erg1delta","display_uniquename":"erg1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00370:allele-1","expression":"Null"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"regulation phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_01330","SJAG_04284","SJAG_00370","SJAG_03360"],"single_locus_genotype_uniquenames":["nup61delta","shc1delta","erg1delta","mad2delta"],"synonyms":[{"name":"fission yeast regulation phenotype","type":"exact"}],"termid":"FYPO:0000145","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000619":null,"FYPO:0004318":null,"FYPO:0006545":null,"FYPO_EXT:0000001":null}}


id: MONDO:0006730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Psychotic organic mental disorders resulting from the toxic effect of drugs and chemicals or other harmful substance.","definition_xrefs":["MESH:D011605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug-induced mental disorder","termid":"MONDO:0001423"},{"relation_name":"is_a","term_name":"substance-induced psychosis","termid":"MONDO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"drug psychosis","secondary_identifiers":["SCTID:191483003","UMLS:C0033937","MEDGEN:46195","DOID:1742","ICD9:292.1","MedDRA:10045855"],"synonyms":[{"name":"drug-induced psychosis","type":"exact"},{"name":"drug-induced psychotic disorder","type":"exact"}],"termid":"MONDO:0006730","xrefs":{"Monarch":{"xref_id":"0006730"}}}


id: FYPO:0001001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition, instead of the normal G1 phase, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to nitrogen starvation","termid":"FYPO:0000710"},{"relation_name":"is_a","term_name":"cell cycle arrest at mitotic G2/M phase transition during starvation","termid":"FYPO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen depletion","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen deprivation","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during nitrogen starvation","type":"related"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition during nitrogen starvation","type":"related"},{"name":"advanced nitrogen deprivation-induced G1 arrest","type":"related"},{"name":"cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","type":"exact"},{"name":"mitotic G2/M phase transition arrest during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001001"}


id: PBO:0058936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sheath formation associated","termid":"PBO:0058936"}


id: PBO:0000587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Gos1 (predicted)","termid":"PBO:0000587"}


id: PBO:0087540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RAVE complex (Rav1p, Rav2p, Skp1p); the RAVE complex associates with the V1 domain of the vacuolar membrane (H+)-ATPase (V-ATPase) and promotes assembly and reassembly of the holoenzyme","termid":"PBO:0087540"}


id: PBO:0059392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S25 pseudogene 1","termid":"PBO:0059392"}


id: PBO:0055064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2480","termid":"PBO:0055064"}


id: MONDO:0003766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a dorsal plus ventral thalamus.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic cancer","termid":"MONDO:0002786"},{"relation_name":"is_a","term_name":"thalamic disorder","termid":"MONDO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thalamic cancer","secondary_identifiers":["DOID:6098","icd11.foundation:610018988","MEDGEN:83429","NCIT:C4576","SCTID:188287005","UMLS:C0346902"],"synonyms":[{"name":"cancer of dorsal plus ventral thalamus","type":"exact"},{"name":"dorsal plus ventral thalamus cancer","type":"exact"},{"name":"malignant dorsal plus ventral thalamus neoplasm","type":"exact"},{"name":"malignant neoplasm of dorsal plus ventral thalamus","type":"exact"},{"name":"malignant neoplasm of thalamus","type":"exact"},{"name":"malignant neoplasm of the thalamus","type":"exact"},{"name":"malignant thalamic neoplasm","type":"exact"},{"name":"malignant thalamic neoplasms","type":"exact"},{"name":"malignant thalamic tumor","type":"exact"},{"name":"malignant thalamic tumors","type":"exact"},{"name":"malignant thalamic tumour","type":"exact"},{"name":"malignant thalamic tumours","type":"exact"},{"name":"malignant thalamus neoplasm","type":"exact"},{"name":"malignant thalamus neoplasms","type":"exact"},{"name":"malignant thalamus tumor","type":"exact"},{"name":"malignant thalamus tumors","type":"exact"},{"name":"malignant thalamus tumour","type":"exact"},{"name":"malignant thalamus tumours","type":"exact"},{"name":"malignant tumor of thalamus","type":"exact"},{"name":"malignant tumor of the thalamus","type":"exact"},{"name":"malignant tumour of thalamus","type":"exact"},{"name":"malignant tumour of the thalamus","type":"exact"},{"name":"thalamic neoplasm","type":"related"},{"name":"tumor of thalamus","type":"exact"},{"name":"tumour of thalamus","type":"exact"}],"termid":"MONDO:0003766","xrefs":{"Monarch":{"xref_id":"0003766"}}}


id: PBO:0052127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 5","termid":"PBO:0052127"}


id: PBO:0039996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL8B pseudogene 2","termid":"PBO:0039996"}


id: MONDO:0016560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ptosis-syndactyly-learning difficulties syndrome","secondary_identifiers":["Orphanet:238766"],"termid":"MONDO:0016560","xrefs":{"Monarch":{"xref_id":"0016560"}}}


id: PBO:0088824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lem2-Nur1 complex subunit Nur1","termid":"PBO:0088824"}


id: PBO:0049412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2C","termid":"PBO:0049412"}


id: PBO:0028120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_lateral_cortical_node,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028120"}


id: PBO:0076262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SV2 related protein","termid":"PBO:0076262"}


id: PBO:0081267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33B","termid":"PBO:0081267"}


id: GO:0007387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process giving rise to specification of cell identity in the anterior compartments of the segmented embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compartment pattern specification","termid":"GO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior compartment pattern formation","synonyms":[{"name":"anterior compartment pattern specification","type":"related"}],"termid":"GO:0007387"}


id: GO:0045249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex.","definition_xrefs":["GOC:mtg_sensu","PMID:9395502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"cytosol pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045249"}


id: PBO:0064566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP1 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064566"}


id: MONDO:0004358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the larynx that arises from the subglottic area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subglottis cancer","termid":"MONDO:0001293"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"subglottis carcinoma","secondary_identifiers":["DOID:7764","NCIT:C5972","UMLS:C1299239","MEDGEN:226968","SCTID:372104008"],"synonyms":[{"name":"cancer of subglottis","type":"broad"},{"name":"cancer of the subglottis","type":"broad"},{"name":"carcinoma of subglottis","type":"exact"},{"name":"carcinoma of the subglottis","type":"exact"},{"name":"subglottic cancer","type":"broad"},{"name":"subglottic carcinoma","type":"exact"},{"name":"subglottic throat cancer","type":"broad"},{"name":"subglottis carcinoma","type":"exact"}],"termid":"MONDO:0004358","xrefs":{"Monarch":{"xref_id":"0004358"}}}


id: PBO:0084202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-CoA reductase; converts HMG-CoA to mevalonate, a rate-limiting step in sterol biosynthesis; one of two isozymes; overproduction induces assembly of peripheral ER membrane arrays and short nuclear-associated membrane stacks; forms foci at nuclear periphery upon DNA replication stress; HMG2 has a paralog, HMG1, that arose from the whole genome duplication; human homolog HMGCR can complement yeast hmg2 mutant","termid":"PBO:0084202"}


id: GO:0051290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein heterotetramer, a macromolecular structure consisting of four noncovalently associated subunits, of which not all are identical.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tetramerization","termid":"GO:0051262"},{"relation_name":"is_a","term_name":"protein heterooligomerization","termid":"GO:0051291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein heterotetramerization","synonyms":[{"name":"protein heterotetramer assembly","type":"exact"},{"name":"protein heterotetramer biosynthesis","type":"exact"},{"name":"protein heterotetramer biosynthetic process","type":"exact"},{"name":"protein heterotetramer formation","type":"exact"}],"termid":"GO:0051290"}


id: GO:0006439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Hydrolysis of the peptidyl-tRNA by aminoacyl-tRNA hydrolase upon termination of translation. Analogous to usual peptidyl transfer during elongation, except that the acceptor is H2O instead of an aminoacyl-tRNA.","definition_xrefs":["ISBN:019879276X"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoacyl-tRNA hydrolase reaction (obsolete GO:0006439)","synonyms":[{"name":"aminoacyl-tRNA hydrolase reaction","type":"exact"}],"termid":"GO:0006439"}


id: MONDO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm that arises from the sublingual gland. The majority are carcinomas.","definition_xrefs":["NCIT:C3527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sublingual gland neoplasm","termid":"MONDO:0021242"},{"relation_name":"is_a","term_name":"major salivary gland cancer","termid":"MONDO:0044743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"sublingual gland cancer","secondary_identifiers":["UMLS:C0153361","DOID:8849","ICD10CM:C08.1","ICD9:142.2","MEDGEN:102263","SCTID:363381003"],"synonyms":[{"name":"cancer of sublingual gland","type":"exact"},{"name":"malignant neoplasm of sublingual gland","type":"exact"},{"name":"malignant neoplasm of the sublingual gland","type":"exact"},{"name":"malignant sublingual gland neoplasm","type":"exact"},{"name":"malignant sublingual gland tumor","type":"exact"},{"name":"malignant sublingual gland tumour","type":"exact"},{"name":"malignant tumor of sublingual gland","type":"exact"},{"name":"malignant tumor of the sublingual gland","type":"exact"},{"name":"malignant tumour of sublingual gland","type":"exact"},{"name":"malignant tumour of the sublingual gland","type":"exact"},{"name":"sublingual gland cancer","type":"exact"}],"termid":"MONDO:0004667","xrefs":{"Monarch":{"xref_id":"0004667"}}}


id: GO:0018674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + O2 + reduced [NADPH--hemoprotein reductase] = (1S,6R)-isopiperitenol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:15129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"},{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(S)-limonene 3-monooxygenase activity","secondary_identifiers":["EC:1.14.14.99","KEGG_REACTION:R02469","MetaCyc:--LIMONENE-3-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0739"],"synonyms":[{"name":"(-)-limonene 3-hydroxylase activity","type":"related"},{"name":"(-)-limonene 3-monooxygenase activity","type":"exact"},{"name":"(-)-limonene,NADPH:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"(S)-limonene,NADPH:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"limonene 3-hydroxylase activity","type":"exact"}],"termid":"GO:0018674"}


id: PBO:0116681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 13A","termid":"PBO:0116681"}


id: PBO:0068756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 1","termid":"PBO:0068756"}


id: PBO:0054409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1805","termid":"PBO:0054409"}


id: PBO:0066775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 73","termid":"PBO:0066775"}


id: GO:0030870
data:
  {"annotated_genes":["SJAG_01677","SJAG_00640","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81272,82101,113714],"is_not":false,"summary":null,"term":"GO:0030870"}]},"cv_name":"cellular_component","definition":"Trimeric protein complex that possesses endonuclease activity; involved in meiotic recombination, DNA repair and checkpoint signaling. In Saccharomyces cerevisiae, the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins orthologous to the Saccharomyces cerevisiae proteins.","definition_xrefs":["GOC:mah","PMID:11988766","PMID:17674145","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01677":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Mre11 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"MRN complex","type":"exact"},{"name":"MRX complex","type":"exact"},{"name":"RAD50-MRE11-NBN complex","type":"exact"},{"name":"RMX complex","type":"exact"},{"name":"Rad50 complex","type":"exact"},{"name":"Rad50-Rad32-Nbs1 complex","type":"exact"}],"termid":"GO:0030870","terms_by_termid":{"GO:0030870":null}}


id: PBO:0049315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 3, pseudogene","termid":"PBO:0049315"}


id: _global:causally_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"_global:causal_relation_between_processes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","secondary_identifiers":["RO:0002418"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:causally_upstream_of_or_within"}


id: GO:0052694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: jasmonoyl-isoleucine + NADPH + H+ + O2 = 12-hydroxy-jasmonoyl-isoleucine + NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-12421","PMID:21576464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"jasmonoyl-isoleucine-12-hydroxylase activity","secondary_identifiers":["RHEA:54808"],"termid":"GO:0052694"}


id: MONDO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amblyopia","termid":"MONDO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disuse amblyopia","secondary_identifiers":["ICD10CM:H53.01","DOID:10378","SCTID:193638002","UMLS:C0152189","ICD9:368.02","MEDGEN:508918"],"synonyms":[{"name":"deprivation amblyopia","type":"exact"}],"termid":"MONDO:0001022","xrefs":{"Monarch":{"xref_id":"0001022"}}}


id: FYPO:0001145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man9GlcNAc2 measured in a cell is higher than normal. Man9GlcNAc2 is any N-glycan that consists of a branched undecasaccharide consisting of nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["CHEBI:59579","PMID:12686557","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased Man9GlcNAc level","synonyms":[{"name":"increased Man9GlcNAc accumulation","type":"related"},{"name":"increased Man9GlcNAc level during mitotic cell cycle","type":"related"},{"name":"increased Man9GlcNAc level during vegetative growth","type":"exact"},{"name":"increased Man9GlcNAc2 level","type":"exact"},{"name":"increased cellular Man9GlcNAc level","type":"exact"}],"termid":"FYPO:0001145"}


id: GO:0043599
data:
  {"annotated_genes":["SJAG_00272","SJAG_02182","SJAG_00729","SJAG_00863","SJAG_01010","SJAG_04150"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114821,70651,74539,78360,78990,79675],"is_not":false,"summary":null,"term":"GO:0043599"}]},"cv_name":"cellular_component","definition":"A nuclear complex of five polypeptides that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase delta or epsilon. In Saccharomyces and several other species, the subunits are known as Rfc1p-Rfc5p, although subunit names do not necessarily correspond between different species.","definition_xrefs":["GOC:mtg_sensu","PMID:14614842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication factor C complex","termid":"GO:0005663"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear replisome","termid":"GO:0043601"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"nuclear DNA replication factor C complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RFC","type":"exact"}],"termid":"GO:0043599","terms_by_termid":{"GO:0043599":null}}


id: MONDO:0013808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maffucci syndrome is a very rare genetic bone and skin disorder characterized by multiple enchondromas, leading to bone deformities, combined with multiple dark, irregularly shaped hemangiomas or less commonly lymphangiomas.","definition_xrefs":["Orphanet:163634"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"vascular bone neoplasm","termid":"MONDO:0024499"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Maffucci syndrome","secondary_identifiers":["SCTID:46041001","DOID:0060221","MEDGEN:7437","NCIT:C3213","GARD:6958","NORD:1393","OMIM:614569","UMLS:C0024454","icd11.foundation:548780091"],"synonyms":[{"name":"Chondroplasia angiomatosis","type":"exact"},{"name":"Dyschondrodysplasia with hemangiomas","type":"related"},{"name":"Dyschondroplasia and cavernous hemangioma","type":"exact"},{"name":"Kast syndrome","type":"related"},{"name":"Maffucci syndrome","type":"exact"},{"name":"Maffucci type enchondromatosis","type":"exact"},{"name":"Maffucci's anomalad","type":"exact"},{"name":"chondrodysplasia with hemangioma","type":"exact"},{"name":"enchondromatosis with hemangiomata","type":"exact"},{"name":"enchondromatosis with multiple cavernous hemangiomas","type":"related"},{"name":"hemangiomata with Dyschondroplasia","type":"exact"},{"name":"hemangiomatosis Chondrodystrophica","type":"related"},{"name":"multiple Angiomas and Endochondromas","type":"related"},{"name":"multiple enchondromatosis, Maffucci type","type":"related"}],"termid":"MONDO:0013808","xrefs":{"Monarch":{"xref_id":"0013808"}}}


id: PBO:0054777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2190","termid":"PBO:0054777"}


id: PBO:0116587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 antisense RNA 3","termid":"PBO:0116587"}


id: GO:1901615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving organic hydroxy compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic hydroxy compound metabolic process (obsolete GO:1901615)","synonyms":[{"name":"organic hydroxy compound metabolism","type":"exact"}],"termid":"GO:1901615"}


id: GO:0102822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-hydroxyflavone + S-adenosyl-L-methionine = a 3'-methoxyflavone + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:55332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"flavone 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8262","EC:2.1.1.42"],"synonyms":[{"name":"luteolin O-methyltransferase activity","type":"narrow"},{"name":"quercetin 3'-O-methyltransferase activity","type":"narrow"}],"termid":"GO:0102822"}


id: GO:0018011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal alanine of proteins.","definition_xrefs":["RESID:AA0061","RESID:AA0062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}


id: MONDO:0012873
data:
  {"annotated_genes":["SJAG_00222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89008],"is_not":false,"summary":null,"term":"MONDO:0012873"}]},"cv_name":"mondo","definition":"Ehlers-Danlos syndrome, spondylocheirodysplastic type is a subtype of Ehlers-Danlos syndrome characterized by skeletal dysplasia comprising platyspondyly with moderate short stature, osteopenia and widened metaphyses, in addition to hyperextensible, thin, easily bruised skin, hypermobility of small joints with tendency to contractures, prominent eyes with bluish sclerae, wrinkled palms, atrophy of the thenar muscle and tapering fingers.","definition_xrefs":["Orphanet:157965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, spondylodysplastic type","termid":"MONDO:0007526"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00222":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005497"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, spondylocheirodysplastic type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567340","UMLS:C2676510","icd11.foundation:1653521697","GARD:12610","MEDGEN:393515","DOID:0080739","OMIM:612350"],"synonyms":[{"name":"EDS, spondylocheirodysplastic type","type":"exact"},{"name":"EDSSPD3","type":"related"},{"name":"Ehlers-Danlos syndrome, spondylodysplastic type, 3","type":"related"},{"name":"SCD-EDS","type":"related"},{"name":"spondylocheirodysplasia, Ehlers-Danlos syndrome-like","type":"related"}],"termid":"MONDO:0012873","terms_by_termid":{"MONDO:0012873":null},"xrefs":{"Monarch":{"xref_id":"0012873"}}}


id: PBO:0027173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_phleomycin","termid":"PBO:0027173"}


id: MONDO:1011878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ataxic neuropathy, non-human animal","secondary_identifiers":["OMIA:001467"],"termid":"MONDO:1011878","xrefs":{"Monarch":{"xref_id":"1011878"}}}


id: PR:Q9P375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19B12.06c gene.","definition_xrefs":["UniProtKB:Q9P375","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized rhomboid protein C19B12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.06c","synonyms":[{"name":"Spom972h-SPAC19B12.06c","type":"exact"}],"termid":"PR:Q9P375"}


id: PBO:0088354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase/IP8 pyrophosphatase","termid":"PBO:0088354"}


id: PBO:0034516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long,_thick_stable_microtubule_bundle","termid":"PBO:0034516"}


id: MONDO:0004589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary retinal dystrophy (obsolete MONDO:0004589)","termid":"MONDO:0004589","xrefs":{"Monarch":{"xref_id":"0004589"}}}


id: GO:0015566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of acriflavin from one side of a membrane to the other. Acriflavin is a fluorescent dye used as a local antiseptic and also as a biological stain. It intercalates into nucleic acids thereby inhibiting bacterial and viral replication.","definition_xrefs":["PubChem_Compound:6842"],"gene_count":0,"genotype_count":0,"name":"obsolete acriflavine transmembrane transporter activity (obsolete GO:0015566)","synonyms":[{"name":"acriflavin resistant pump activity","type":"related"},{"name":"acriflavin transporter activity","type":"related"},{"name":"acriflavine transporter activity","type":"related"}],"termid":"GO:0015566"}


id: FYPO:0007990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize isoleucine, and therefore requires isoleucine in the medium for vegetative cell growth.","definition_xrefs":["PMID:35325114","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for isoleucine","synonyms":[{"name":"growth auxotrophic for isoleucine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for isoleucine during vegetative growth","type":"exact"},{"name":"isoleucine auxotrophy","type":"exact"}],"termid":"FYPO:0007990"}


id: GO:0030213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hyaluronan, the naturally occurring anionic form of hyaluronic acid. Hyaluronan is a type of non-sulfated glycosaminoglycan composed of the repeating disaccharide unit beta(1,4)-D-glucuronic acid-beta(1,3)-N-acetyl-D-glucosamine.","definition_xrefs":["PMID:33171800","PMID:35536932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"hyaluronan metabolic process","termid":"GO:0030212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyaluronan biosynthetic process","secondary_identifiers":["Reactome:R-HSA-2142850"],"synonyms":[{"name":"hyaluronan anabolism","type":"exact"},{"name":"hyaluronan biosynthesis","type":"exact"},{"name":"hyaluronan formation","type":"exact"},{"name":"hyaluronan synthesis","type":"exact"}],"termid":"GO:0030213"}


id: PBO:0047480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 7","termid":"PBO:0047480"}


id: MONDO:0030072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 88","secondary_identifiers":["MEDGEN:1712195","DOID:0112222","GARD:16398","OMIM:618959","UMLS:C5394553"],"synonyms":[{"name":"DEE88","type":"exact"},{"name":"EIEE88","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 88","type":"exact"},{"name":"developmental and epileptic encephalopathy 88","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 88","type":"exact"}],"termid":"MONDO:0030072","xrefs":{"Monarch":{"xref_id":"0030072"}}}


id: PR:O94413
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribose-phosphate pyrophosphokinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.06c","secondary_identifiers":["UniProtKB:O94413"],"synonyms":[{"name":"Spom972h-prs","type":"exact"},{"name":"phosphoribosyl pyrophosphate synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94413"}


id: FYPO:0004833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased during anaphase B. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["PMID:16824200","GO:1902967","GO:0000092","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle midzone during anaphase","termid":"FYPO:0004831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone during anaphase B","type":"exact"},{"name":"decreased protein localization to spindle midzone during anaphase B during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle midzone during mitotic anaphase B","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone during anaphase B","type":"exact"}],"termid":"FYPO:0004833"}


id: GO:1904832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of removal of superoxide radicals.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:BHF_miRNA","PMID:22836756","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to oxidative stress","termid":"GO:1900408"},{"relation_name":"is_a","term_name":"negative regulation of response to reactive oxygen species","termid":"GO:1901032"},{"relation_name":"is_a","term_name":"regulation of removal of superoxide radicals","termid":"GO:2000121"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"removal of superoxide radicals","termid":"GO:0019430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"negative regulation of removal of superoxide radicals","synonyms":[{"name":"down regulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"down regulation of removal of O2-","type":"exact"},{"name":"down regulation of removal of oxygen free radicals","type":"exact"},{"name":"down regulation of removal of superoxide radicals","type":"exact"},{"name":"down-regulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"down-regulation of removal of O2-","type":"exact"},{"name":"down-regulation of removal of oxygen free radicals","type":"exact"},{"name":"down-regulation of removal of superoxide radicals","type":"exact"},{"name":"downregulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"downregulation of removal of O2-","type":"exact"},{"name":"downregulation of removal of oxygen free radicals","type":"exact"},{"name":"downregulation of removal of superoxide radicals","type":"exact"},{"name":"inhibition of cellular detoxification of superoxide radicals","type":"narrow"},{"name":"inhibition of removal of O2-","type":"narrow"},{"name":"inhibition of removal of oxygen free radicals","type":"narrow"},{"name":"inhibition of removal of superoxide radicals","type":"narrow"},{"name":"negative regulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"negative regulation of removal of O2-","type":"exact"},{"name":"negative regulation of removal of oxygen free radicals","type":"exact"}],"termid":"GO:1904832"}


id: GO:0070061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the D- or L-enantiomer of fructose, the ketohexose arabino-hex-2-ulose.","definition_xrefs":["GOC:mah","CHEBI:28757","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"fructose binding","termid":"GO:0070061"}


id: PR:O74520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp663 gene.","definition_xrefs":["UniProtKB:O74520","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C663.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.14c","synonyms":[{"name":"Spom972h-trp663","type":"exact"}],"termid":"PR:O74520"}


id: FYPO:0002359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in telomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"normal histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"normal telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002359"}


id: MONDO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Riedel's fibrosing thyroiditis (obsolete MONDO:0001948)","termid":"MONDO:0001948","xrefs":{"Monarch":{"xref_id":"0001948"}}}


id: MOD:00879
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod","definition_xrefs":["PubMed:2081203","Unimod:457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"naphthalene-2,3-dicarboxaldehyde","synonyms":[{"name":"NDA","type":"related"},{"name":"naphthalene-2,3-dicarboxaldehyde","type":"related"}],"termid":"MOD:00879"}


id: PBO:0051680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibin subunit beta B","termid":"PBO:0051680"}


id: PBO:0030433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_methyltransferase_activity","termid":"PBO:0030433"}


id: PBO:0027315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_stress_granule","termid":"PBO:0027315"}


id: PR:O74564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.11c","synonyms":[{"name":"Spom972h-wtf9","type":"exact"}],"termid":"PR:O74564"}


id: PBO:0029301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_cell_during_G0","termid":"PBO:0029301"}


id: GO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:11911826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"regulation of immune cell mediated cell death","type":"exact"},{"name":"regulation of immune cell mediated cell killing","type":"exact"},{"name":"regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"regulation of leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001910"}


id: FYPO:0001648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal amino acid import during nitrogen starvation","synonyms":[{"name":"abnormal amino acid import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"abnormal amino acid import during nitrogen depletion","type":"exact"},{"name":"abnormal amino acid import during nitrogen deprivation","type":"exact"},{"name":"abnormal amino acid import into cell during nitrogen starvation","type":"exact"},{"name":"abnormal amino acid uptake during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001648"}


id: MONDO:0008695
data:
  {"annotated_genes":["SJAG_01229","SJAG_16459"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87373,87374],"is_not":false,"summary":null,"term":"MONDO:0008695"}]},"cv_name":"mondo","definition":"Chorea-acanthocytosis (ChAc) is a form of neuroacanthocytosis and is characterized clinically by a Huntington disease-like phenotype with progressive neurological symptoms including movement disorders, psychiatric manifestations and cognitive disturbances.","definition_xrefs":["Orphanet:2388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroacanthocytosis","termid":"MONDO:0016987"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01229":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002039","MONDO:0005093","MONDO:0005559"],"is_obsolete":false,"name":"chorea-acanthocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:200150","ICD9:333.0","MEDGEN:98277","UMLS:C0393576","DOID:0050766","GARD:3956","NANDO:1200014","SCTID:66881004"],"synonyms":[{"name":"CHAC","type":"exact"},{"name":"CHOREOACANTHOCYTOSIS","type":"related"},{"name":"Chac","type":"exact"},{"name":"Levine-Critchley syndrome","type":"exact"},{"name":"acanthocytosis with neurologic disorder","type":"related"},{"name":"chorea acanthocytosis","type":"related"},{"name":"chorea-acanthocytosis","type":"exact"},{"name":"choreaacanthocytosis","type":"related"},{"name":"choreo-acanthocytosis","type":"exact"},{"name":"choreoacanthocytosis","type":"exact"},{"name":"neuroacanthocytosis","type":"related"}],"termid":"MONDO:0008695","terms_by_termid":{"MONDO:0008695":null},"xrefs":{"Monarch":{"xref_id":"0008695"}}}


id: GO:0044747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming distinct miRNA isoforms from a mature miRNA that differ at their 3'-ends.","definition_xrefs":["PMID:22055292","PMID:22055293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA processing","termid":"GO:0031054"},{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"},{"relation_name":"part_of","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"pre-miRNA 3'-end processing","synonyms":[{"name":"mature miRNA 3'-end processing","type":"related"},{"name":"miRNA 3' end terminal trimming","type":"broad"},{"name":"miRNA 3'-end processing","type":"broad"},{"name":"miRNA trimming","type":"broad"}],"termid":"GO:0044747"}


id: PBO:0077756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 20","termid":"PBO:0077756"}


id: PBO:0085154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome-binding component of the SWR1 complex; SWR1 exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for vacuolar protein sorting","termid":"PBO:0085154"}


id: MONDO:0020036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare nervous system cancer.","gene_count":0,"genotype_count":0,"name":"obsolete rare nervous system tumor (obsolete MONDO:0020036)","secondary_identifiers":["Orphanet:98062"],"synonyms":[{"name":"nervous system rare tumor","type":"exact"},{"name":"rare nervous system cancer","type":"exact"},{"name":"rare nervous system neoplasm","type":"exact"}],"termid":"MONDO:0020036","xrefs":{"Monarch":{"xref_id":"0020036"}}}


id: PBO:0076725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 family AKT coactivator A","termid":"PBO:0076725"}


id: MONDO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypoglycemic coma (obsolete MONDO:0002053)","secondary_identifiers":["ICD9:251.0","DOID:1607","HP:0001325","SCTID:267384006"],"termid":"MONDO:0002053","xrefs":{"Monarch":{"xref_id":"0002053"}}}


id: GO:2001281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle cell chemotaxis toward tendon cell.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"muscle cell chemotaxis toward tendon cell","termid":"GO:0036061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle cell chemotaxis toward tendon cell","synonyms":[{"name":"regulation of muscle cell attraction","type":"related"},{"name":"regulation of muscle cell chemotaxis towards tendon cell","type":"exact"}],"termid":"GO:2001281"}


id: MONDO:0021481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the submandibular gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"submandibular gland neoplasm","termid":"MONDO:0021244"},{"relation_name":"is_a","term_name":"benign neoplasm of major salivary gland","termid":"MONDO:0021492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of submandibular gland","secondary_identifiers":["NCIT:C4891","SCTID:92415001","UMLS:C0685988","icd11.foundation:564841249","MEDGEN:151936"],"synonyms":[{"name":"benign neoplasm of the submandibular gland","type":"exact"},{"name":"benign submandibular gland neoplasm","type":"exact"},{"name":"benign submandibular gland tumor","type":"exact"},{"name":"benign submandibular gland tumour","type":"exact"},{"name":"benign tumor of submandibular gland","type":"exact"},{"name":"benign tumor of the submandibular gland","type":"exact"},{"name":"benign tumour of submandibular gland","type":"exact"},{"name":"benign tumour of the submandibular gland","type":"exact"},{"name":"submandibular gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021481","xrefs":{"Monarch":{"xref_id":"0021481"}}}


id: MONDO:0019824
data:
  {"annotated_genes":["SJAG_04398","SJAG_02829","SJAG_00321","SJAG_04110","SJAG_03597","SJAG_03698","SJAG_03418","SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[88798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[88884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032787"},{"annotations":[87807,87806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"},{"annotations":[88934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030886"},{"annotations":[87412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[87121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[88622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary deficiency","termid":"MONDO:0015127"},{"relation_name":"is_a","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_00321":null,"SJAG_02829":null,"SJAG_03418":null,"SJAG_03597":null,"SJAG_03698":null,"SJAG_04110":null,"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"non-acquired pituitary hormone deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19272","ICD10CM:E23.0","MEDGEN:1842784","Orphanet:95488","UMLS:C5681572"],"termid":"MONDO:0019824","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0014497":null,"MONDO:0026763":null,"MONDO:0030886":null,"MONDO:0032787":null},"xrefs":{"Monarch":{"xref_id":"0019824"}}}


id: PBO:0002700
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possibly related to human/mouse periphilin","termid":"PBO:0002700"}


id: PBO:0074266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC5-SMC6 complex localization factor 1","termid":"PBO:0074266"}


id: GO:0010904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of UDP-glucose catabolism. UDP-glucose catabolic processes are the chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"UDP-alpha-D-glucose catabolic process","termid":"GO:0006258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of UDP-glucose catabolic process","synonyms":[{"name":"regulation of UDP-glucose catabolism","type":"exact"}],"termid":"GO:0010904"}


id: MONDO:0011564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cone-rod dystrophy that has material basis in variation in the chromosome region 1q12-q24.","definition_xrefs":["DOID:0111014","PMID:11053266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 8","secondary_identifiers":["MEDGEN:381360","GARD:15381","OMIM:605549","UMLS:C1854180","MESH:C565322"],"synonyms":[{"name":"CORD8","type":"exact"},{"name":"cone-rod dystrophy 8","type":"exact"},{"name":"cone-rod dystrophy type 8","type":"exact"}],"termid":"MONDO:0011564","xrefs":{"Monarch":{"xref_id":"0011564"}}}


id: PBO:0087583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); APC/C is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the platform domain of the APC/C, based on structural analysis; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087583"}


id: MONDO:0010155
data:
  {"annotated_genes":["SJAG_04323"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86908],"is_not":false,"summary":null,"term":"MONDO:0010155"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal ichthyosis syndrome (obsolete MONDO:0017270)","termid":"MONDO:0017270"},{"relation_name":"is_a","term_name":"neutral lipid storage disease","termid":"MONDO:0015611"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"Dorfman-Chanarin disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1283","GARD:3979","OMIM:275630","UMLS:C0268238","icd11.foundation:690728790","NANDO:1200623","Orphanet:98907","NANDO:2200997","NANDO:1200622","SCTID:19604005","MEDGEN:82780"],"synonyms":[{"name":"CDS","type":"related"},{"name":"Chanarin-Dorfman Syndrome","type":"exact"},{"name":"Chanarin-Dorfman disease","type":"related"},{"name":"Chanarin-Dorfman syndrome","type":"exact"},{"name":"DCs","type":"related"},{"name":"Dorfman Chanarin syndrome","type":"related"},{"name":"Dorfman-Chanarin syndrome","type":"related"},{"name":"NLSDI","type":"exact"},{"name":"disorder of cornification 12 (neutral lipid storage type)","type":"related"},{"name":"ichthyosiform erythroderma with leukocyte vacuolation","type":"related"},{"name":"ichthyotic neutral Lipid storage disease","type":"related"},{"name":"neutral Lipid storage disease with ichthyosis","type":"related"},{"name":"neutral lipid storage disease with ichthyosis","type":"exact"},{"name":"neutral lipid storage disease with ichthyotic","type":"related"},{"name":"triglyceride storage disease with impaired long-chain fatty acid oxidation","type":"related"}],"termid":"MONDO:0010155","terms_by_termid":{"MONDO:0010155":null},"xrefs":{"Monarch":{"xref_id":"0010155"}}}


id: GO:0075051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont cell wall strengthening during entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of symbiont cell wall strengthening involved in entry into host (obsolete GO:0075051)","synonyms":[{"name":"negative regulation of symbiont cell wall strengthening during entry into host","type":"related"}],"termid":"GO:0075051"}


id: PATO:0000225
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000225 sensory function (obsolete PATO:0000225)","termid":"PATO:0000225"}


id: GO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a leukocyte.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte mediated immunity","secondary_identifiers":["GO:0019723","GO:0042087"],"synonyms":[{"name":"cell-mediated immune response","type":"related"},{"name":"cellular immune response","type":"related"},{"name":"immune cell effector process","type":"exact"},{"name":"immune cell mediated immunity","type":"exact"},{"name":"leucocyte immune effector process","type":"exact"},{"name":"leucocyte mediated immunity","type":"exact"},{"name":"leukocyte immune effector process","type":"exact"}],"termid":"GO:0002443"}


id: MONDO:0005038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic disorder (obsolete MONDO:0005038)","termid":"MONDO:0005038","xrefs":{"Monarch":{"xref_id":"0005038"}}}


id: MONDO:0030634
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87986],"is_not":false,"summary":null,"term":"MONDO:0030634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy, hereditary diffuse, with spheroids","termid":"MONDO:0030796"},{"relation_name":"is_a","term_name":"AARS1-related leukoencephalopathy","termid":"MONDO:1010132"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy, hereditary diffuse, with spheroids 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794254","OMIM:619661","UMLS:C5562044"],"synonyms":[{"name":"HDLS2","type":"exact"},{"name":"leukoencephalopathy, hereditary diffuse, with spheroids 2","type":"exact"},{"name":"leukoencephalopathy, hereditary diffuse, with spheroids, swedish IIA","type":"exact"}],"termid":"MONDO:0030634","terms_by_termid":{"MONDO:0030634":null},"xrefs":{"Monarch":{"xref_id":"0030634"}}}


id: GO:0004484
data:
  {"annotated_genes":["SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77377],"is_not":false,"summary":null,"term":"GO:0004484"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + (5')pp-Pur-mRNA = diphosphate + G(5')ppp-Pur-mRNA; G(5')ppp-Pur-mRNA is mRNA containing a guanosine residue linked 5' through three phosphates to the 5' position of the terminal residue.","definition_xrefs":["EC:2.7.7.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA guanylyltransferase activity","termid":"GO:0008192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"mRNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-77081","MetaCyc:MRNA-GUANYLYLTRANSFERASE-RXN","Reactome:R-HSA-77083","Reactome:R-HSA-9815529","RHEA:54592"],"synonyms":[{"name":"GTP--RNA guanylyltransferase activity","type":"related"},{"name":"GTP:mRNA guanylyltransferase activity","type":"exact"},{"name":"mRNA capping enzyme activity","type":"related"},{"name":"messenger RNA guanylyltransferase activity","type":"related"},{"name":"protein lambda2","type":"related"}],"termid":"GO:0004484","terms_by_termid":{"GO:0004484":null}}


id: PBO:0074677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 61","termid":"PBO:0074677"}


id: GO:1904707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["PMID:23246467","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell proliferation","termid":"GO:0048661"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell proliferation","termid":"GO:1904705"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"activation of VSMC proliferation","type":"narrow"},{"name":"activation of vascular smooth muscle cell proliferation","type":"narrow"},{"name":"positive regulation of VSMC proliferation","type":"exact"},{"name":"positive regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"up regulation of VSMC proliferation","type":"exact"},{"name":"up regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"up-regulation of VSMC proliferation","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"upregulation of VSMC proliferation","type":"exact"},{"name":"upregulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904707"}


id: FYPO:0004507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation does not occur at the centromeric regions. The remainder of the sister chromatids may or may not separate.","definition_xrefs":["PomBase:mah","PMID:18362178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000337","FYPO:0000641"],"is_obsolete":false,"name":"abolished centromeric DNA separation","synonyms":[{"name":"abolished DNA separation at centromere","type":"exact"},{"name":"abolished centromeric DNA separation during mitosis","type":"exact"},{"name":"abolished centromeric DNA separation during mitotic cell cycle","type":"related"},{"name":"abolished centromeric DNA separation during vegetative growth","type":"exact"},{"name":"abolished mitotic centromeric DNA separation","type":"exact"},{"name":"abolished mitotic sister chromatid separation at centromere","type":"exact"},{"name":"abolished segregation of centromeric DNA","type":"related"},{"name":"abolished sister kinetochore separation","type":"related"}],"termid":"FYPO:0004507"}


id: PBO:0085362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribomutase; catalyzes interconversion of ribose-1-phosphate and ribose-5-phosphate; has some phosphoglucomutase activity but primary activity in vivo is phosphoribomutase; contributes to ribose recycling in the pentose phosphate pathway; transcription induced in response to stress; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; non-essential","termid":"PBO:0085362"}


id: PBO:0090404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A amino terminus domain (NTD) isomerase Ani1","termid":"PBO:0090404"}


id: PBO:0087593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0087593"}


id: GO:0046071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGTP, guanosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009216"},{"relation_name":"is_a","term_name":"dGTP metabolic process","termid":"GO:0046070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dGTP biosynthetic process","synonyms":[{"name":"dGTP anabolism","type":"exact"},{"name":"dGTP biosynthesis","type":"exact"},{"name":"dGTP formation","type":"exact"},{"name":"dGTP synthesis","type":"exact"}],"termid":"GO:0046071"}


id: GO:0035892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change that affects platelet aggregation in another organism. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:fj","PMID:15922770","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of platelet aggregation in another organism (obsolete GO:0035892)","synonyms":[{"name":"modulation by organism of platelet aggregation in other organism","type":"exact"},{"name":"modulation of platelet aggregation in another organism","type":"exact"},{"name":"modulation of platelet aggregation in other organism","type":"exact"},{"name":"regulation of platelet aggregation in other organism","type":"related"}],"termid":"GO:0035892"}


id: PBO:0042808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competing endogenous lncRNA 2 for microRNA let-7b","termid":"PBO:0042808"}


id: PBO:0073043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 1","termid":"PBO:0073043"}


id: FYPO:0007522
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121232],"is_not":false,"summary":null,"term":"FYPO:0007522"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of tacrolimus and magnesium chloride. Cells stop growing (and may die) at concentrations of tacrolimus and magnesium chloride that allow wild type cells to grow.","definition_xrefs":["PMID:19625445","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to tacrolimus and magnesium chloride","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"inviable in the presence of FK506 and chloride","type":"exact"},{"name":"sensitive to FK506 and magnesium chloride","type":"exact"},{"name":"sensitive to magnesium chloride and FK506","type":"exact"},{"name":"sensitive to magnesium chloride and tacrolimus","type":"exact"},{"name":"sensitive to tacrolimus and MgCl2","type":"exact"},{"name":"sensitive to tacrolimus and magnesium chloride during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus and magnesium chloride during vegetative growth","type":"exact"},{"name":"vic-negative","type":"related"}],"termid":"FYPO:0007522","terms_by_termid":{"FYPO:0007522":null,"FYPO_EXT:0000001":null}}


id: GO:0055092
data:
  {"annotated_genes":["SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108298],"is_not":false,"summary":null,"term":"GO:0055092"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of sterol within an organism or cell.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sterol homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055092","terms_by_termid":{"GO:0055092":null}}


id: PR:000050599
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase PP1-1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-316 of the amino acid sequence represented by UniProtKB:P13681. Example: UniProtKB:P13681, Thr-316, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:29899453","PMID:7957097","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase sid2 (Schizosaccharomyces pombe)","termid":"PR:000050482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis2/UnPhos(T316)","pombase_gene_id":"SPBC776.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein phosphatase PP1-1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dis2/UnPhos:1","type":"exact"},{"name":"UniProtKB:P13681, Thr-316, PR:000026291","type":"narrow"},{"name":"dis2/UnPhos(T316)","type":"exact"}],"termid":"PR:000050599"}


id: GO:0090077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:add","GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foam cell differentiation","termid":"GO:0090077"}


id: GO:0140150
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Hydrogel filling the interstitial extracellular matrix space. Composed of proteoglycans such as hyaluronan and lectin-binding proteoglycans, SPOCK proteoglycans and small leucin-rich proteoglycan (SLRP).","definition_xrefs":["PMID:21123617","PMID:33605520","PMID:39223427","PMID:25701227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"interstitial matrix","termid":"GO:0005614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gel phase of interstitial matrix","termid":"GO:0140150"}


id: GO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a component or product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"complement binding","termid":"GO:0001848"}


id: MONDO:0033809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated blepharochalasis","secondary_identifiers":["MEDGEN:1801812","GARD:22124","UMLS:C5681341","Orphanet:519390"],"termid":"MONDO:0033809","xrefs":{"Monarch":{"xref_id":"0033809"}}}


id: GO:0033322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-homomethionine, a non-protein amino acid synthesized from L-methionine via chain elongation.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homomethionine metabolic process","termid":"GO:0033321"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-homomethionine biosynthetic process","synonyms":[{"name":"homomethionine anabolism","type":"exact"},{"name":"homomethionine biosynthesis","type":"exact"},{"name":"homomethionine biosynthetic process","type":"exact"},{"name":"homomethionine formation","type":"exact"},{"name":"homomethionine synthesis","type":"exact"}],"termid":"GO:0033322"}


id: MONDO:0014392
data:
  {"annotated_genes":["SJAG_01059"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88309],"is_not":false,"summary":null,"term":"MONDO:0014392"}]},"cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SLC13A5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005027","MONDO:0700092","MONDO:0005066"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 25","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12901","OMIM:615905","UMLS:C4014621","MEDGEN:863058","NORD:1914","DOID:0080453"],"synonyms":[{"name":"DEE25","type":"exact"},{"name":"EIEE25","type":"exact"},{"name":"SLC13A5 Citrate Transporter Disorder","type":"exact"},{"name":"SLC13A5 deficiency","type":"related"},{"name":"SLC13A5 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 25, with amelogenesis imperfecta","type":"exact"},{"name":"developmental and epileptic encephalopathy, 25","type":"exact"},{"name":"early infantile epileptic encephalopathy 25","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SLC13A5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 25","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 25","type":"exact"}],"termid":"MONDO:0014392","terms_by_termid":{"MONDO:0014392":null},"xrefs":{"Monarch":{"xref_id":"0014392"}}}


id: PBO:0041367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 45","termid":"PBO:0041367"}


id: SO:0000248
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of kind of sequence alteration where the copies of a region present varies across a population.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_length_alteration","synonyms":[{"name":"sequence length alteration","type":"exact"}],"termid":"SO:0000248"}


id: GO:0047990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-L-glutamate + H+ = 4-amino-3-hydroxybutanoate + CO2.","definition_xrefs":["EC:4.1.1.16","RHEA:14073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxyglutamate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R04135","MetaCyc:HYDROXYGLUTAMATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"3-hydroxy-L-glutamate 1-carboxy-lyase (4-amino-3-hydroxybutanoate-forming)","type":"related"},{"name":"3-hydroxy-L-glutamate 1-carboxy-lyase activity","type":"related"}],"termid":"GO:0047990"}


id: PBO:0065638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 13","termid":"PBO:0065638"}


id: GO:0004592
data:
  {"annotated_genes":["SJAG_03679"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74257],"is_not":false,"summary":null,"term":"GO:0004592"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (R)-pantoate + beta-alanine = AMP + diphosphate + (R)-pantothenate.","definition_xrefs":["EC:6.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pantoate-beta-alanine ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:10912","MetaCyc:PANTOATE-BETA-ALANINE-LIG-RXN"],"synonyms":[{"name":"(R)-pantoate:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"D-pantoate:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"pantoate-activating enzyme activity","type":"related"},{"name":"pantoic-activating enzyme activity","type":"related"},{"name":"pantothenate synthetase activity","type":"related"}],"termid":"GO:0004592","terms_by_termid":{"GO:0004592":null}}


id: MONDO:1010014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Essential hypertension that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential hypertension, non-human animal","secondary_identifiers":["OMIA:000510"],"termid":"MONDO:1010014","xrefs":{"Monarch":{"xref_id":"1010014"}}}


id: PBO:0076684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 3","termid":"PBO:0076684"}


id: GO:1990381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ubiquitin-specific protease.","definition_xrefs":["GOC:PARL","PMID:24063750","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protease binding","termid":"GO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"ubiquitin-specific protease binding","synonyms":[{"name":"deubiquitinase binding","type":"exact"},{"name":"deubiquitinating enzyme binding","type":"exact"}],"termid":"GO:1990381"}


id: PBO:0071023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 25","termid":"PBO:0071023"}


id: MONDO:0054727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 23","secondary_identifiers":["UMLS:C4540185","MEDGEN:1626589","GARD:16246","DOID:0070181","OMIM:617707"],"synonyms":[{"name":"SPGF23","type":"related"},{"name":"spermatogenic failure 23","type":"exact"}],"termid":"MONDO:0054727","xrefs":{"Monarch":{"xref_id":"0054727"}}}


id: PBO:0068412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1 pseudogene 3","termid":"PBO:0068412"}


id: MONDO:0003597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0003597 (obsolete MONDO:0003597)","termid":"MONDO:0003597","xrefs":{"Monarch":{"xref_id":"0003597"}}}


id: PBO:0058791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7160","termid":"PBO:0058791"}


id: MONDO:0010082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subaortic stenosis-short stature syndrome","secondary_identifiers":["MESH:C537749","Orphanet:3191","MEDGEN:167085","OMIM:271960","UMLS:C0795947","GARD:405"],"synonyms":[{"name":"Onat syndrome","type":"exact"},{"name":"subaortic stenosis short stature syndrome","type":"related"},{"name":"subaortic stenosis--short stature syndrome","type":"related"}],"termid":"MONDO:0010082","xrefs":{"Monarch":{"xref_id":"0010082"}}}


