# terms

id: PBO:0078530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 23","termid":"PBO:0078530"}


id: MONDO:0016482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Silver-Russell syndrome","termid":"MONDO:0008394"},{"relation_name":"is_a","term_name":"chromosome 11 disorder","termid":"MONDO:0700018"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silver-Russell syndrome due to maternal uniparental disomy of chromosome 11","secondary_identifiers":["UMLS:C5679841","MEDGEN:1843295","Orphanet:231147","GARD:20606"],"synonyms":[{"name":"Silver-Russell syndrome due to maternal uniparental disomy of chromosome type 11","type":"exact"},{"name":"UPD(11)mat","type":"exact"}],"termid":"MONDO:0016482","xrefs":{"Monarch":{"xref_id":"0016482"}}}


id: MONDO:0023102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facio skeletal genital syndrome rippberger type","synonyms":[{"name":"Ripperger Aase syndrome","type":"related"}],"termid":"MONDO:0023102","xrefs":{"Monarch":{"xref_id":"0023102"}}}


id: GO:0070773
data:
  {"annotated_genes":["SJAG_00450","SJAG_00476"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80381,80798],"is_not":false,"summary":null,"term":"GO:0070773"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-terminal L-glutaminyl-[protein] + H2O = N-terminal L-glutamyl-[protein] + NH3. This reaction is the deamidation of an N-terminal glutamine residue of a protein.","definition_xrefs":["RHEA:50680","PMID:19560421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00450":null,"SJAG_00476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"protein-N-terminal glutamine amidohydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.5.1.122"],"synonyms":[{"name":"NtQ-amidase activity","type":"exact"}],"termid":"GO:0070773","terms_by_termid":{"GO:0070773":null}}


id: PBO:0076074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20-related kinase adaptor beta pseudogene 1","termid":"PBO:0076074"}


id: PBO:0050891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IER3 antisense RNA 1","termid":"PBO:0050891"}


id: PBO:0040454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 11B (putative)","termid":"PBO:0040454"}


id: PBO:0086240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes to sites of polarized growth; required for selection and/or maintenance of polarized growth sites, may modulate signaling by the GTPases Cdc42p and Rho1p; contains LIM domains and has similarity to metazoan paxillin; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0086240"}


id: PBO:0091407
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Swi5 independently of Rad57","termid":"PBO:0091407"}


id: PBO:0084924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monomeric glyoxalase I; catalyzes the detoxification of methylglyoxal (a by-product of glycolysis) via condensation with glutathione to produce S-D-lactoylglutathione; required for full activity of O-acetyl homoserine sulfhydrylase, Met17p; expression regulated by methylglyoxal levels and osmotic stress","termid":"PBO:0084924"}


id: PR:P10815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin cdc13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"G2/mitotic-specific cyclin cdc13 (Schizosaccharomyces pombe)","termid":"PR:000036302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cdc13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.03","secondary_identifiers":["UniProtKB:P10815"],"synonyms":[{"name":"SPBC582.03","type":"related"},{"name":"Spom972h-cdc13","type":"exact"}],"termid":"PR:P10815"}


id: MONDO:0010942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eukaryotic translation elongation factor 1 alpha-1-like 14 (obsolete MONDO:0010942)","secondary_identifiers":["OMIM:600841"],"synonyms":[{"name":"EEF1A1L14","type":"related"},{"name":"eukaryotic translation elongation Factor 1 Alpha-1-like type 14","type":"exact"},{"name":"eukaryotic translation elongation factor 1 ALPHA-1-like 14","type":"related"},{"name":"prostatic carcinoma tumor-inducing Gene 1","type":"related"}],"termid":"MONDO:0010942","xrefs":{"Monarch":{"xref_id":"0010942"}}}


id: MONDO:0044346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Echinococcus granulosus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"echinococcosis","termid":"MONDO:0005738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"echinococcus granulosus infectious disease","secondary_identifiers":["ICD9:122.4","MEDGEN:508866","UMLS:C0152068","ICD9:122.3","SCTID:75006000"],"synonyms":[{"name":"Echinococcus granulosus caused disease or disorder","type":"exact"},{"name":"Echinococcus granulosus disease or disorder","type":"exact"},{"name":"Echinococcus granulosus infectious disease","type":"exact"},{"name":"echinococcus granulosus infection","type":"exact"},{"name":"echinococcus granulosus infectious disease","type":"exact"},{"name":"unilocular hydatid disease","type":"related"}],"termid":"MONDO:0044346","xrefs":{"Monarch":{"xref_id":"0044346"}}}


id: GO:0021758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the putamen over time from its initial formation until its mature state. The putamen is the lens-shaped basal ganglion involved with control of voluntary movement in the brain.","definition_xrefs":["ISBN:0878937420","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putamen development","termid":"GO:0021758"}


id: PBO:0031330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chloramphenicol","termid":"PBO:0031330"}


id: PBO:0073239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 3","termid":"PBO:0073239"}


id: PBO:0031735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiosis","termid":"PBO:0031735"}


id: PBO:0083911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Folylpolyglutamate synthetase; catalyzes extension of the glutamate chains of the folate coenzymes, required for methionine synthesis and for maintenance of mitochondrial DNA; protein abundance increases in response to DNA replication stress","termid":"PBO:0083911"}


id: PBO:0027943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_spindle","termid":"PBO:0027943"}


id: PR:O13967
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bgs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase component bgs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.07c","synonyms":[{"name":"1,3-beta-D-glucan-UDP glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bgs2","type":"exact"},{"name":"meiotic expression up-regulated protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13967"}


id: MONDO:0019334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia, familial, 2","termid":"MONDO:0011153"},{"relation_name":"is_a","term_name":"diazoxide-resistant diffuse hyperinsulinism","termid":"MONDO:0015625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive hyperinsulinism due to Kir6.2 deficiency","secondary_identifiers":["MEDGEN:1677653","Orphanet:79644","UMLS:C5191078","GARD:16727"],"synonyms":[{"name":"autosomal recessive hyperinsulinemic hypoglycemia due to Kir6.2 deficiency","type":"exact"}],"termid":"MONDO:0019334","xrefs":{"Monarch":{"xref_id":"0019334"}}}


id: PBO:0076079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin interacting protein 1","termid":"PBO:0076079"}


id: PATO:0000886
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000886 absolute litter size value (obsolete PATO:0000886)","termid":"PATO:0000886"}


id: PBO:0040442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B3","termid":"PBO:0040442"}


id: GO:0006762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrofolate reduction (obsolete GO:0006762)","synonyms":[{"name":"dihydrofolate reduction","type":"exact"}],"termid":"GO:0006762"}


id: PBO:0052395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member C1","termid":"PBO:0052395"}


id: FYPO:0007114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, and morphology of microtubule bundles are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal microtubule bundle","synonyms":[{"name":"normal MT bundle","type":"exact"},{"name":"normal microtubule array","type":"related"},{"name":"normal microtubule bundle physical object quality","type":"exact"}],"termid":"FYPO:0007114"}


id: PBO:0015682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion defective protein","termid":"PBO:0015682"}


id: GO:0032122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the oral apparatus. The oral apparatus is a funnel-like structure used by the cell to collect food and channel it to the cytostome, characteristic of ciliate protozoans.","definition_xrefs":["PMID:10503189","PMID:6414830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oral apparatus organization","synonyms":[{"name":"oral apparatus morphogenesis","type":"related"},{"name":"oral apparatus organisation","type":"exact"},{"name":"oral apparatus organization and biogenesis","type":"related"},{"name":"stomatogenesis","type":"related"}],"termid":"GO:0032122"}


id: PBO:0040687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS3 antisense RNA 1","termid":"PBO:0040687"}


id: GO:0160093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cordate pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:23020903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate pharynx development","termid":"GO:0160093"}


id: PBO:0083274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion in cyr1 mutant results in loss of stress resistance","termid":"PBO:0083274"}


id: PBO:0045644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 2","termid":"PBO:0045644"}


id: GO:0045093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to alpha subunit of interleukin-18. IL-18a is a component of IL-18 that is essential for IL-18 binding on the surface of T-helper 1 cells.","definition_xrefs":["PMID:10653850"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-18 alpha subunit binding (obsolete GO:0045093)","synonyms":[{"name":"IL-18Ra binding","type":"exact"}],"termid":"GO:0045093"}


id: PBO:0044993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphanous related formin 1","termid":"PBO:0044993"}


id: MONDO:0005978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of cattle, sheep, or goats with protozoa of the genus theileria. This infection results in an acute or chronic febrile condition.","definition_xrefs":["MESH:D013801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"theileriasis","secondary_identifiers":["ICD9:136.8","DOID:3733","MEDGEN:11763","SCTID:68771000","EFO:0007506","UMLS:C0039753"],"synonyms":[{"name":"infection by Theileria","type":"exact"},{"name":"theileriosis","type":"exact"}],"termid":"MONDO:0005978","xrefs":{"Monarch":{"xref_id":"0005978"}}}


id: GO:0097721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Golgi-derived vesicle to which the ciliary basal body docks via its transitional fibers. Its membrane is compositionally distinct from Golgi membranes, and will become the ciliary membrane once the ciliary vesicle is fused to the plasma membrane. The ciliary vesicle is thought to be formed by multiple smaller vesicles that attach to the transitional fibers and then fuse to form a larger vesicle.","definition_xrefs":["PMID:25686250","GOC:cilia","PMID:13978319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ciliary vesicle","synonyms":[{"name":"CV","type":"related"},{"name":"primary ciliary vesicle","type":"exact"}],"termid":"GO:0097721"}


id: GO:0046422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: violaxanthin + 2 ascorbate = zeaxanthin + 2 dehydroascorbate + 2 H2O; and antheraxanthin + ascorbate = zeaxanthin + dehydroascorbate + H2O.","definition_xrefs":["EC:1.23.5.1","GOC:ai","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, reducing C-O-C group as acceptor","termid":"GO:0120546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"violaxanthin de-epoxidase activity","secondary_identifiers":["RHEA:32371"],"synonyms":[{"name":"VDE","type":"related"},{"name":"violaxanthin:ascorbate oxidoreductase activity","type":"related"}],"termid":"GO:0046422"}


id: PBO:0072665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 receptor","termid":"PBO:0072665"}


id: GO:1905097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:20484009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of guanyl-nucleotide exchange factor activity (obsolete GO:1905097)","synonyms":[{"name":"regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"regulation of GDS","type":"exact"},{"name":"regulation of GEF","type":"exact"},{"name":"regulation of GNRP","type":"narrow"},{"name":"regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"regulation of guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:1905097"}


id: FYPO:0003457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of homocysteine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular homocysteine level","synonyms":[{"name":"increased cellular homocysteine level during mitotic cell cycle","type":"related"},{"name":"increased cellular homocysteine level during vegetative growth","type":"exact"},{"name":"increased homocysteine accumulation","type":"related"}],"termid":"FYPO:0003457"}


id: MONDO:0012501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mutagen sensitivity (obsolete MONDO:0012501)","secondary_identifiers":["OMIM:610452"],"synonyms":[{"name":"mutagen sensitivity","type":"exact"}],"termid":"MONDO:0012501","xrefs":{"Monarch":{"xref_id":"0012501"}}}


id: SO:0001703
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is acetylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_acetylation_site","synonyms":[{"name":"H3K9 acetylation site","type":"exact"},{"name":"H3K9ac","type":"exact"}],"termid":"SO:0001703"}


id: PBO:0109030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHCR7 divergent transcript","termid":"PBO:0109030"}


id: PBO:0030658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_Man9GlcNAc_level","termid":"PBO:0030658"}


id: GO:0018303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0285"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide (obsolete GO:0018303)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018303"}


id: GO:0010615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle adaptation","termid":"GO:0010612"},{"relation_name":"is_a","term_name":"positive regulation of muscle adaptation","termid":"GO:0014744"},{"relation_name":"positively_regulates","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle adaptation","termid":"GO:0010615"}


id: FYPO:0008238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of polyphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular polyphosphate level","termid":"FYPO:0007816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased total cellular polyphosphate level","termid":"FYPO:0008238"}


id: PBO:0026831
data:
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id: PBO:0084302
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id: GO:0010498
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id: GO:0140154
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Network-forming collagens can either form a chicken-wire-like network or a hexagonal network. Collagen type IV forms a chicken-wire-like structure and is found in the basement membrane.","definition_xrefs":["PMID:21421911","PMID:31387942","PMID:21421915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex of collagen trimers","termid":"GO:0098644"},{"relation_name":"part_of","term_name":"collagenous component of basement membrane","termid":"GO:0140143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chicken-wire-like collagen network","termid":"GO:0140154"}


id: MONDO:0009627
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id: PBO:0078329
data:
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id: PBO:0047989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member F, pseudogene","termid":"PBO:0047989"}


id: GO:1901580
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id: MONDO:0011675
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id: MONDO:0100448
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id: PBO:0057565
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id: MONDO:0012388
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id: FYECO:0000037
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  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bismuth ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Bi ions","synonyms":[{"name":"bismuth ions added","type":"exact"}],"termid":"FYECO:0000037"}


id: GO:0043944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042174"},{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"is_a","term_name":"negative regulation of asexual reproduction","termid":"GO:1903665"},{"relation_name":"negatively_regulates","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"}


id: PR:Q10256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mud1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein mud1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.08","synonyms":[{"name":"DNA-damage-inducible protein DDI1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mud1","type":"exact"},{"name":"UBA domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10256"}


id: MONDO:0013403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any visceral heterotaxy in which the cause of the disease is a mutation in the ACVR2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 4, autosomal","secondary_identifiers":["MEDGEN:462407","DOID:0051019","OMIM:613751","UMLS:C3151057"],"synonyms":[{"name":"ACVR2B visceral heterotaxy","type":"exact"},{"name":"HTX4","type":"related"},{"name":"heterotaxy, visceral, 4, autosomal","type":"exact"},{"name":"visceral heterotaxy caused by mutation in ACVR2B","type":"exact"}],"termid":"MONDO:0013403","xrefs":{"Monarch":{"xref_id":"0013403"}}}


id: PBO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 ortholog Cpc2","termid":"PBO:0001550"}


id: MONDO:0030990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kohlschutter-Tonz syndrome-like","secondary_identifiers":["UMLS:C5543202","MEDGEN:1781649","OMIM:619229"],"synonyms":[{"name":"KTZSL","type":"exact"}],"termid":"MONDO:0030990","xrefs":{"Monarch":{"xref_id":"0030990"}}}


id: PBO:0090876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-5 family plus-end directed microtubule motor, bimC subfamily Cut7","termid":"PBO:0090876"}


id: PBO:0074571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 27","termid":"PBO:0074571"}


id: GO:0019765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete low affinity Fc receptor activity (obsolete GO:0019765)","synonyms":[{"name":"low affinity Fc receptor activity","type":"exact"}],"termid":"GO:0019765"}


id: MONDO:0015802
data:
  {"annotated_genes":["SJAG_01926","SJAG_02282","SJAG_03418","SJAG_00800","SJAG_00741","SJAG_01900","SJAG_02920","SJAG_04179","SJAG_00170","SJAG_02218","SJAG_01146","SJAG_01778","SJAG_00554","SJAG_03698","SJAG_00210"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030914"},{"annotations":[88949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032823"},{"annotations":[88451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032485"},{"annotations":[88282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957536"},{"annotations":[88094,88095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013266"},{"annotations":[87540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014842"},{"annotations":[87297,87298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030912"},{"annotations":[87033,87032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030916"},{"annotations":[87030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030917"},{"annotations":[87004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030921"},{"annotations":[87010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030922"},{"annotations":[88264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020847"}]},"cv_name":"mondo","definition":"Autosomal dominant form of non-syndromic intellectual disability.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic intellectual disability","termid":"MONDO:0000509"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00210":null,"SJAG_00554":null,"SJAG_00741":null,"SJAG_00800":null,"SJAG_01146":null,"SJAG_01778":null,"SJAG_01900":null,"SJAG_01926":null,"SJAG_02218":null,"SJAG_02282":null,"SJAG_02920":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_04179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant non-syndromic intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:178469","MEDGEN:1826082","UMLS:C5680502","DOID:0060307","GARD:12107"],"synonyms":[{"name":"autosomal dominant mental retardation","type":"broad"},{"name":"autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"autosomal dominant non-syndromic mental retardation","type":"exact"},{"name":"non-syndromic intellectual disability, autosomal dominant","type":"exact"}],"termid":"MONDO:0015802","terms_by_termid":{"MONDO:0013266":null,"MONDO:0014842":null,"MONDO:0020847":null,"MONDO:0030912":null,"MONDO:0030914":null,"MONDO:0030916":null,"MONDO:0030917":null,"MONDO:0030921":null,"MONDO:0030922":null,"MONDO:0032485":null,"MONDO:0032823":null,"MONDO:0957536":null},"xrefs":{"Monarch":{"xref_id":"0015802"}}}


id: FYPO:0005830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules is abnormal. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein transport along microtubule during vegetative growth","synonyms":[{"name":"abnormal protein movement along microtubule during vegetative growth","type":"exact"},{"name":"abnormal protein transport along microtubule during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005830"}


id: PR:Q9UR39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hst4 gene.","definition_xrefs":["UniProtKB:Q9UR39","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent protein deacetylase hst4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.04c","synonyms":[{"name":"Spom972h-hst4","type":"exact"},{"name":"homologous to SIR2 protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"regulatory protein SIR2 homolog 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR39"}


id: GO:0098807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is part of a chloroplast thylakoid membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast thylakoid membrane","termid":"GO:0009535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}


id: GO:0046849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone remodeling","secondary_identifiers":["Wikipedia:Bone_remodeling"],"synonyms":[{"name":"bone remodelling","type":"exact"}],"termid":"GO:0046849"}


id: PBO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional enzyme","termid":"PBO:0003273"}


id: PBO:0084763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial mRNA maturase; forms a complex with Mrs1p to mediate splicing of the bI3 intron of the COB gene; encoded by both exon and intron sequences of partially processed COB mRNA","termid":"PBO:0084763"}


id: MONDO:0054561
data:
  {"annotated_genes":["SJAG_04582"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88818],"is_not":false,"summary":null,"term":"MONDO:0054561"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anauxetic dysplasia","termid":"MONDO:0011773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04582":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"anauxetic dysplasia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617396","UMLS:C4479357","DOID:0080962","MEDGEN:1384439"],"synonyms":[{"name":"ANXD2","type":"related"},{"name":"anauxetic dysplasia 2","type":"exact"}],"termid":"MONDO:0054561","terms_by_termid":{"MONDO:0054561":null},"xrefs":{"Monarch":{"xref_id":"0054561"}}}


id: PBO:0066902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 203","termid":"PBO:0066902"}


id: GO:2001045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of integrin-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of integrin-mediated signaling pathway","termid":"GO:2001044"},{"relation_name":"negatively_regulates","term_name":"integrin-mediated signaling pathway","termid":"GO:0007229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of integrin-mediated signaling pathway","synonyms":[{"name":"negative regulation of integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:2001045"}


id: MONDO:0009229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaline fibromatosis syndrome","secondary_identifiers":["Orphanet:498474","GARD:22029","DOID:0111669","OMIM:228600","UMLS:C5574677","MEDGEN:1805033"],"synonyms":[{"name":"HFS","type":"related"},{"name":"hyaline fibromatosis syndrome","type":"exact"},{"name":"hyalinosis, systemic","type":"related"},{"name":"infantile systemic hyalinosis (former subtype)","type":"related"},{"name":"inherited systemic hyalinosis","type":"related"},{"name":"juvenile hyaline fibromatosis (former subtype)","type":"related"}],"termid":"MONDO:0009229","xrefs":{"Monarch":{"xref_id":"0009229"}}}


id: PBO:0030908
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_vegetative_growth","termid":"PBO:0030908"}


id: GO:0071904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein N-linked glycosylation via asparagine in which N-acetylgalactosamine is added to the N4 of asparagine, forming an (S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-galactopyranosyl)amino-4-oxobutanoic acid residue.","definition_xrefs":["GOC:pr","RESID:AA0420"],"gene_count":0,"genotype_count":0,"name":"obsolete protein N-linked N-acetylgalactosaminylation via asparagine (obsolete GO:0071904)","synonyms":[{"name":"protein amino acid N-linked N-acetylgalactosaminylation via asparagine","type":"exact"}],"termid":"GO:0071904"}


id: PATO:0000243
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000243 lordosis reflex (obsolete PATO:0000243)","termid":"PATO:0000243"}


id: GO:0032168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane within hyphae of filamentous fungi at sites where a septum will form; composed of septins as well as septin-associated proteins.","definition_xrefs":["GOC:krc","PMID:16151244","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"hyphal septin ring","termid":"GO:0032168"}


id: PBO:0073819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 20","termid":"PBO:0073819"}


id: MONDO:0020175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant tumor of palpebral epidermis (obsolete MONDO:0020175)","termid":"MONDO:0020175","xrefs":{"Monarch":{"xref_id":"0020175"}}}


id: FYPO:0004126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004126"}


id: GO:0035259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear glucocorticoid receptor.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"nuclear glucocorticoid receptor binding","synonyms":[{"name":"glucocorticoid receptor binding","type":"broad"}],"termid":"GO:0035259"}


id: PBO:0011979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rad55/Rhp55","termid":"PBO:0011979"}


id: PBO:0040892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 1A pseudogene 1","termid":"PBO:0040892"}


id: PBO:0043046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 3","termid":"PBO:0043046"}


id: GO:0098518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphopolynucleotide + H2O = polynucleotide + phosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide phosphatase activity (obsolete GO:0098518)","termid":"GO:0098518"}


id: MONDO:0011762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the OTOA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 22","secondary_identifiers":["MEDGEN:339636","MESH:C564633","UMLS:C1846896","DOID:0110480","OMIM:607039","GARD:22601"],"synonyms":[{"name":"DFNB22","type":"narrow"},{"name":"OTOA autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 22","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 22","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in OTOA","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 22","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 22","type":"exact"},{"name":"deafness, autosomal recessive 22","type":"narrow"},{"name":"deafness, autosomal recessive type 22","type":"narrow"}],"termid":"MONDO:0011762","xrefs":{"Monarch":{"xref_id":"0011762"}}}


id: MONDO:0002662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete plague (obsolete MONDO:0002662)","termid":"MONDO:0002662","xrefs":{"Monarch":{"xref_id":"0002662"}}}


id: MONDO:1010756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary severe hyperkeratosis in dogs due to a variation in the TGM1 gene.","definition_xrefs":["PMID:39118209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis TGM1-related, dog","secondary_identifiers":["OMIA:000546-9615"],"termid":"MONDO:1010756","xrefs":{"Monarch":{"xref_id":"1010756"}}}


id: PBO:0080273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 36 pseudogene","termid":"PBO:0080273"}


id: MONDO:0010626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The X-linked variant of the Hyper-IgM syndrome. The affected individuals are virtually always male, because males only have one X chromosome, received from their mothers. Their mothers are not symptomatic, even though they are carriers of the allele, because the trait is recessive. Male offspring of these women have a 50% chance of inheriting their mother's mutant allele.","definition_xrefs":["Wikipedia:Hyper-IgM_syndrome_type_1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hyper-IgM syndrome","termid":"MONDO:0003947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hyper-IgM syndrome type 1","secondary_identifiers":["OMIM:308230","Orphanet:101088","GARD:73","MEDGEN:96019","SCTID:403835002","NORD:1261","NCIT:C61244","DOID:0060022","DOID:6620","UMLS:C0398689"],"synonyms":[{"name":"CD40 ligand deficiency","type":"related"},{"name":"HIGM","type":"related"},{"name":"HIGM1","type":"exact"},{"name":"HIGMX-1","type":"exact"},{"name":"Hyper IgM Syndromes","type":"exact"},{"name":"IHIS","type":"related"},{"name":"X-linked hyper IgM syndrome","type":"related"},{"name":"X-linked hyper-IgM syndrome","type":"exact"},{"name":"XHIGM","type":"exact"},{"name":"XHIM","type":"related"},{"name":"hyper IgM immunodeficiency, X-linked","type":"related"},{"name":"hyper IgM syndrome","type":"related"},{"name":"hyper IgM syndrome 1","type":"related"},{"name":"hyper-IgM immunodeficiency, X-linked","type":"related"},{"name":"hyper-IgM syndrome","type":"related"},{"name":"hyper-IgM syndrome 1","type":"related"},{"name":"hyper-IgM syndrome due to CD40 ligand deficiency","type":"exact"},{"name":"hyper-IgM syndrome due to CD40L deficiency","type":"exact"},{"name":"hyper-IgM syndrome type 1","type":"exact"},{"name":"hyper-IgM syndrome, X-linked","type":"exact"},{"name":"hyperimmunoglobulin M syndrome","type":"exact"},{"name":"immunodeficiency 3","type":"related"},{"name":"immunodeficiency with hyper IgM type 1","type":"related"},{"name":"immunodeficiency with hyper-IgM, type 1","type":"related"},{"name":"immunodeficiency, X-linked, with hyper-IgM, X-linked recessive","type":"exact"}],"termid":"MONDO:0010626","xrefs":{"Monarch":{"xref_id":"0010626"}}}


id: PBO:0053280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin-like receptor pseudogene 1","termid":"PBO:0053280"}


id: GO:0160029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a kidney cortex tubule cell (specialized epithelial cell of the kidney) loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.","definition_xrefs":["PMID:18987110","PMID:31847447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell dedifferentiation","termid":"GO:0043697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney cortex tubule cell dedifferentiation","termid":"GO:0160029"}


id: MONDO:0030896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 13","termid":"MONDO:0016911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13q33-q34 deletion syndrome","secondary_identifiers":["MEDGEN:1744234","OMIM:619148","UMLS:C5436890"],"termid":"MONDO:0030896","xrefs":{"Monarch":{"xref_id":"0030896"}}}


id: PBO:0087229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Securin; inhibits anaphase by binding separin Esp1p; blocks cyclin destruction and mitotic exit, essential for meiotic progression and mitotic cell cycle arrest; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation","termid":"PBO:0087229"}


id: GO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(hydroxyimino)propanoate + acetone = acetone oxime + pyruvate.","definition_xrefs":["RHEA:11624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"oximinotransferase activity","secondary_identifiers":["KEGG_REACTION:R03796","MetaCyc:OXIMINOTRANSFERASE-RXN","GO:0016770","EC:2.6.3.1"],"synonyms":[{"name":"oximase activity","type":"related"},{"name":"oximinotransaminase activity","type":"related"},{"name":"pyruvate-acetone oximinotransferase activity","type":"related"},{"name":"transoximase activity","type":"related"},{"name":"transoximinase activity","type":"related"}],"termid":"GO:0050206"}


id: PBO:0028677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0028677"}


id: GO:0098963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic transport","termid":"GO:0098935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"dendritic transport of messenger ribonucleoprotein complex","synonyms":[{"name":"dendritic transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0098963"}


id: PBO:0003771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex subunit Swd2.1","termid":"PBO:0003771"}


id: GO:1902480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mitotic spindle.","definition_xrefs":["GOC:TermGenie","PMID:23885124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mitotic spindle","synonyms":[{"name":"protein localisation in mitotic spindle","type":"exact"},{"name":"protein localisation to mitotic spindle","type":"exact"},{"name":"protein localization in mitotic spindle","type":"exact"}],"termid":"GO:1902480"}


id: PBO:0091690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric-chelate reductase Frp2","termid":"PBO:0091690"}


id: PBO:0056691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic double-stranded break formation protein 1","termid":"PBO:0056691"}


id: MONDO:0008237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phocomelia-ectrodactyly-deafness-sinus arrhythmia syndrome is characterized by phocomelia (involving arms more severely), ectrodactyly, ear anomalies (bilateral anomalies of the pinnae), conductive deafness, dysmorphism (long and prominent philtrum, mild maxillary hypoplasia) and sinus arrhythmia. It has been described in four patients (a father and his son and a mother and her daughter) from two unrelated families.","definition_xrefs":["Orphanet:2878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"phocomelia-ectrodactyly-deafness-sinus arrhythmia syndrome","secondary_identifiers":["GARD:4323","OMIM:171480","MEDGEN:356961","MESH:C537498","UMLS:C1868390"],"synonyms":[{"name":"Stoll-LC)vy-Francfort syndrome","type":"exact"},{"name":"Stoll-Lévy-Francfort syndrome","type":"exact"},{"name":"Stoll-levy-Francfort syndrome","type":"related"},{"name":"facioauriculoradial dysplasia","type":"related"},{"name":"phocomelia ectrodactyly deafness sinus arrhythmia","type":"related"},{"name":"phocomelia-ectrodactyly, EAR malformation, deafness, and sinus arrhythmia","type":"related"}],"termid":"MONDO:0008237","xrefs":{"Monarch":{"xref_id":"0008237"}}}


id: GO:0007218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a neuropeptide binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuropeptide signaling pathway","synonyms":[{"name":"neuropeptide signalling pathway","type":"exact"}],"termid":"GO:0007218"}


id: GO:0097096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which any suture between facial bones is generated and organized.","definition_xrefs":["Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system","GOC:sl","GOC:pr","Wikipedia:Cranial_sutures"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial suture morphogenesis","termid":"GO:0097096"}


id: PBO:0054564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1966","termid":"PBO:0054564"}


id: GO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with serotonin and transmitting the signal across the membrane by activation of the Gq/11 subunit of an associated cytoplasmic heterotrimeric G protein complex. The Gq/11 subunit subsequently activates phospholipase C and results in an increase in inositol triphosphate (IP3) levels.","definition_xrefs":["GOC:mah","PMID:18703043","PMID:18571247","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor activity","termid":"GO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"Gq/11-coupled serotonin receptor activity","synonyms":[{"name":"5-HT2 receptor activity","type":"broad"},{"name":"serotonin receptor activity, coupled via Gq/11","type":"exact"}],"termid":"GO:0001587"}


id: FYPO:0003400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 20S ribosomal RNA precursor measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal 20S rRNA precursor level","synonyms":[{"name":"normal 20S rRNA precursor accumulation","type":"related"},{"name":"normal 20S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"normal 20S rRNA precursor level during vegetative growth","type":"exact"},{"name":"normal 20S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0003400"}


id: GO:0018701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: organohalide + 2 H+ + 2 e- = R-H + HCl. Reactants include chlorohydroquinone (forms hydroquinone) and 2,5-dichlorohydroquinone (forms chlorohydroquinone).","definition_xrefs":["UM-BBD_enzymeID:e0366"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,5-dichlorohydroquinone reductive dehalogenase activity (obsolete GO:0018701)","termid":"GO:0018701"}


id: PBO:0117067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OS9 antisense RNA 1","termid":"PBO:0117067"}


id: PR:Q09828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00303","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.09","secondary_identifiers":["UniProtKB:Q09828"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS2","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09828"}


id: FYECO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which aminolevulinic acid was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ aminolevulinic acid","secondary_identifiers":["PMID:29549126"],"synonyms":[{"name":"+ ALA","type":"exact"}],"termid":"FYECO:0000352"}


id: GO:0051553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavones, a class of pigmented plant compounds based on 2-phenyl-4H-1-benzopyran-4-one (2-phenylchromone).","definition_xrefs":["PMID:18567791","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavone biosynthetic process","synonyms":[{"name":"2-phenyl-4H-1-benzopyran-4-one biosynthesis","type":"narrow"},{"name":"2-phenyl-4H-1-benzopyran-4-one biosynthetic process","type":"narrow"},{"name":"2-phenylchromone biosynthesis","type":"narrow"},{"name":"2-phenylchromone biosynthetic process","type":"narrow"}],"termid":"GO:0051553"}


id: MONDO:0020472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Turner syndrome","termid":"MONDO:0019499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"Turner syndrome due to structural X chromosome anomalies","secondary_identifiers":["GARD:19681","Orphanet:99413","UMLS:C5681631","MEDGEN:1842425"],"termid":"MONDO:0020472","xrefs":{"Monarch":{"xref_id":"0020472"}}}


id: MONDO:0035159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital tumor characterized by a benign cyst with epithelial and epidermoid components, originating from embryologic displacement and ectopic growth of ectodermal tissue in the central nervous system. In contrast to epidermoid cysts, dermoid cysts also contain dermis and skin appendages. Most common location is the lumbosacral region, as well as the cerebellopontine angle and parasellar area for intracranial lesions. Clinical presentation depends on the location and size of the tumor and includes pain, muscle weakness, motor and sensory disturbances, and incontinence for intraspinal lesions, and intracranial hypertension, gait disturbances, cranial nerve dysfunction, and visual deficits for intracranial tumors. The cysts may rupture and cause chemical meningitis.","definition_xrefs":["Orphanet:530033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermoid or epidermoid cyst of the central nervous system","secondary_identifiers":["MEDGEN:1842182","ICD10CM:Q07.8","GARD:22206","UMLS:C5680190"],"synonyms":[{"name":"Dermoid or epidermoid cyst of the CNS","type":"exact"}],"termid":"MONDO:0035159","xrefs":{"Monarch":{"xref_id":"0035159"}}}


id: PBO:0025490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC ubiquitin conjugating enzyme E2 Ubc4/UbcP1","termid":"PBO:0025490"}


id: GO:0062247
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A intracellular vesicle that is part of a chloroplast.","definition_xrefs":["PMID:32245810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"chloroplast vesicle","termid":"GO:0062247"}


id: PBO:0036023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0036023"}


id: PBO:0089166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio2","termid":"PBO:0089166"}


id: MONDO:0008747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 3 oculocutaneous albinism (OCA3) is a form of oculocutaneous albinism (OCA) characterized by rufous or brown albinism and occurring mainly in the African population.","definition_xrefs":["Orphanet:79433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism","termid":"MONDO:0018910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"oculocutaneous albinism type 3","secondary_identifiers":["OMIM:278400","icd11.foundation:1565320806","OMIM:203290","ICD9:270.2","SCTID:63450009","DOID:0070097","MESH:C537731","GARD:4039","UMLS:C0342683","MEDGEN:87450"],"synonyms":[{"name":"OCA3","type":"exact"},{"name":"ROCA","type":"related"},{"name":"Red oculocutaneous albinism","type":"exact"},{"name":"TYRP1 oculocutaneous albinism","type":"exact"},{"name":"Xanthism","type":"related"},{"name":"albinism 3","type":"related"},{"name":"albinism, oculocutaneous, type 3","type":"related"},{"name":"albinism, oculocutaneous, type III","type":"related"},{"name":"oculocutaneous albinism caused by mutation in TYRP1","type":"exact"},{"name":"oculocutaneous albinism type 3","type":"exact"},{"name":"oculocutaneous albinism type III","type":"related"},{"name":"oculocutaneous albinism, type 3","type":"related"},{"name":"rufous OCA","type":"related"},{"name":"rufous oculocutaneous albinism","type":"exact"},{"name":"xanthous oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0008747","xrefs":{"Monarch":{"xref_id":"0008747"}}}


id: GO:0048372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a lateral mesoderm cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"},{"relation_name":"part_of","term_name":"lateral mesodermal cell differentiation","termid":"GO:0048371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesodermal cell fate commitment","synonyms":[{"name":"lateral mesoderm cell fate commitment","type":"exact"},{"name":"lateral plate mesoderm cell fate commitment","type":"exact"},{"name":"lateral plate mesodermal cell fate commitment","type":"exact"}],"termid":"GO:0048372"}


id: GO:0030638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"polyketide metabolic process","synonyms":[{"name":"polyketide metabolism","type":"exact"}],"termid":"GO:0030638"}


id: GO:1900760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sterigmatocystin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"negatively_regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of sterigmatocystin biosynthetic process","synonyms":[{"name":"down regulation of sterigmatocystin anabolism","type":"exact"},{"name":"down regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"down regulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"down regulation of sterigmatocystin formation","type":"exact"},{"name":"down regulation of sterigmatocystin synthesis","type":"exact"},{"name":"down-regulation of sterigmatocystin anabolism","type":"exact"},{"name":"down-regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"down-regulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"down-regulation of sterigmatocystin formation","type":"exact"},{"name":"down-regulation of sterigmatocystin synthesis","type":"exact"},{"name":"downregulation of sterigmatocystin anabolism","type":"exact"},{"name":"downregulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"downregulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"downregulation of sterigmatocystin formation","type":"exact"},{"name":"downregulation of sterigmatocystin synthesis","type":"exact"},{"name":"inhibition of sterigmatocystin anabolism","type":"exact"},{"name":"inhibition of sterigmatocystin biosynthesis","type":"exact"},{"name":"inhibition of sterigmatocystin biosynthetic process","type":"narrow"},{"name":"inhibition of sterigmatocystin formation","type":"exact"},{"name":"inhibition of sterigmatocystin synthesis","type":"exact"},{"name":"negative regulation of sterigmatocystin anabolism","type":"exact"},{"name":"negative regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"negative regulation of sterigmatocystin formation","type":"exact"},{"name":"negative regulation of sterigmatocystin synthesis","type":"exact"}],"termid":"GO:1900760"}


id: PBO:0055187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2611","termid":"PBO:0055187"}


id: GO:0046244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid metabolic process","termid":"GO:0009696"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"salicylic acid catabolic process","synonyms":[{"name":"salicylic acid breakdown","type":"exact"},{"name":"salicylic acid catabolism","type":"exact"},{"name":"salicylic acid degradation","type":"exact"}],"termid":"GO:0046244"}


id: PBO:0070562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 28","termid":"PBO:0070562"}


id: SO:0001982
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plant regulatory promoter motif, composed of a highly conserved hexamer GATAAG (I-box core).","definition_xrefs":["PMID:2902624","SO:ml","PMID:2347304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I-box","synonyms":[{"name":"I-box promoter motif","type":"exact"}],"termid":"SO:0001982"}


id: FYPO:0001773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a tRNA methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished tRNA methyltransferase activity","synonyms":[{"name":"tRNA methyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0001773"}


id: PBO:0013447
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CHS5","termid":"PBO:0013447"}


id: PBO:0065281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 1","termid":"PBO:0065281"}


id: PBO:0056784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 1 pseudogene 1","termid":"PBO:0056784"}


id: MONDO:0037939
data:
  {"annotated_genes":["SJAG_02896","SJAG_02876","SJAG_03961","SJAG_04944","SJAG_04109","SJAG_01841","SJAG_05283","SJAG_01372"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[87376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[87632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[87331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030048"},{"annotations":[87782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[87377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[87068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[87651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[88301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[88645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"Porphyria is a group of diseases in which substances called porphyrins build up, negatively affecting the skin or nervous system. Most types are inherited, but porphyria cutanea tarda may also be due to increased iron in the liver, hepatitis C, alcohol, or HIV/AIDS.","definition_xrefs":["Wikipedia:Porphyria"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin metabolism disease","termid":"MONDO:0037821"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01372":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"porphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1844832","NANDO:1200811","NCIT:C97096","MESH:D011164","SCTID:418470004","UMLS:C5848305"],"synonyms":[{"name":"porphyria","type":"exact"}],"termid":"MONDO:0037939","terms_by_termid":{"MONDO:0007369":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0009902":null,"MONDO:0010420":null,"MONDO:0013000":null,"MONDO:0030048":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0037939"}}}


id: MONDO:1010927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pseudomyotonia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudomyotonia, non-human animal","termid":"MONDO:1010201"},{"relation_name":"is_a","term_name":"myopathy, dog","termid":"MONDO:1010917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pseudomyotonia, dog","secondary_identifiers":["OMIA:001464-9615"],"termid":"MONDO:1010927","xrefs":{"Monarch":{"xref_id":"1010927"}}}


id: GO:0018579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protocatechuate + O2 = 4-carboxy-2-hydroxymuconate semialdehyde.","definition_xrefs":["EC:1.13.11.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"protocatechuate 4,5-dioxygenase activity","secondary_identifiers":["MetaCyc:PROTOCATECHUATE-45-DIOXYGENASE-RXN","RHEA:24044","UM-BBD_reactionID:r0144"],"synonyms":[{"name":"protocatechuate 4,5-oxygenase activity","type":"related"},{"name":"protocatechuate:oxygen 4,5-oxidoreductase (decyclizing)","type":"related"},{"name":"protocatechuic 4,5-dioxygenase activity","type":"related"},{"name":"protocatechuic 4,5-oxygenase activity","type":"related"}],"termid":"GO:0018579"}


id: PBO:0086928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate kinase; functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration; regulated via allosteric activation by fructose bisphosphate; CDC19 has a paralog, PYK2, that arose from the whole genome duplication","termid":"PBO:0086928"}


id: MONDO:0008370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete reticular dystrophy of retinal pigment epithelium (obsolete MONDO:0008370)","termid":"MONDO:0008370","xrefs":{"Monarch":{"xref_id":"0008370"}}}


id: GO:0007413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of axons into a bundle of rods, known as a fascicle.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"},{"relation_name":"is_a","term_name":"neuron projection fasciculation","termid":"GO:0106030"},{"relation_name":"part_of","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonal fasciculation","synonyms":[{"name":"fasciculation of neuron","type":"related"}],"termid":"GO:0007413"}


id: PBO:0044236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 4B","termid":"PBO:0044236"}


id: PBO:0029295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G0_to_G1_transition","termid":"PBO:0029295"}


id: GO:0047740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (7R)-7-(5-carboxylato-5-oxopentanamido)deacetylcephalosporanate + D-glutamate = 2-oxoglutarate + cephalosporin C.","definition_xrefs":["RHEA:14553","EC:2.6.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"cephalosporin-C transaminase activity","secondary_identifiers":["KEGG_REACTION:R03063","MetaCyc:CEPHALOSPORIN-C-TRANSAMINASE-RXN"],"synonyms":[{"name":"L-alanine:cephalosporin-C aminotransferase activity","type":"related"},{"name":"cephalosporin C aminotransferase activity","type":"related"},{"name":"cephalosporin-C:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0047740"}


id: PBO:0084752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix cochaperone; nucleotide release factor for Ssc1p in protein translocation and folding; also acts as cochaperone for Ssq1p in folding of Fe-S cluster proteins; acts as oxidative sensor to regulate mitochondrial Ssc1p; in presence of oxidative stress, dimeric Mge1p becomes a monomer and unable to regulate Ssc1p function; homolog of E. coli GrpE and human Mge1 (GRPEL1), which also responds to oxidative stress","termid":"PBO:0084752"}


id: PBO:0068310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 13","termid":"PBO:0068310"}


id: GO:1990390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 33 of the ubiquitin monomers, is added to a protein.","definition_xrefs":["PMID:24768539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K33-linked ubiquitination","termid":"GO:1990390"}


id: GO:0044839
data:
  {"annotated_genes":["SJAG_04394","SJAG_03529","SJAG_04287","SJAG_03073","SJAG_04597","SJAG_01605","SJAG_02332","SJAG_01429","SJAG_01084","SJAG_00600","SJAG_03854","SJAG_03942","SJAG_03126","SJAG_02342","SJAG_03048","SJAG_01118","SJAG_04140","SJAG_05373","SJAG_00526","SJAG_02563","SJAG_01456","SJAG_03695","SJAG_03309","SJAG_02723","SJAG_03592","SJAG_02576","SJAG_04671","SJAG_01076","SJAG_01205","SJAG_02266","SJAG_00216","SJAG_03486","SJAG_01311","SJAG_03160","SJAG_00640","SJAG_03067","SJAG_04655","SJAG_02592","SJAG_04486","SJAG_04280","SJAG_02858","SJAG_00117","SJAG_03927","SJAG_06592","SJAG_00883","SJAG_02392","SJAG_01000","SJAG_00256","SJAG_01855","SJAG_02098","SJAG_01044","SJAG_02074","SJAG_03602","SJAG_01837","SJAG_03026","SJAG_01901","SJAG_00082","SJAG_01146","SJAG_01805","SJAG_00364","SJAG_04332","SJAG_04469","SJAG_01873","SJAG_01680","SJAG_02771","SJAG_00318","SJAG_01010","SJAG_00214"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120018,108360,104311,79140,106263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000086"},{"annotations":[108585,93377,118056],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[96356,102496,91943,103398,118002],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0044878"},{"annotations":[119281,80812,95912,101141,102497,111299,119108,76791,108588,81402,101307,114029,118802,73009,74220,118058,93378],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033314"},{"annotations":[96489,100378,97799,118004],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031569"},{"annotations":[81275,111300,77143,108589,62528,93379,113722,101309,74222,61704,60996,103011,119021,67987,91067],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007095"},{"annotations":[95508,113810,102957,60894,108983,114474,113428,116466,108620,80470,96315,95164,58988,106457],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010972"},{"annotations":[72579,80472],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[110550,90002,100379,112331,118484,75366,72627,95751,113193,109204,105442,100951,94086,103715,89993,118673,96358,96319,93686],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010971"},{"annotations":[103348,89797],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905287"},{"annotations":[75368],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[113960],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell in G2 phase commits to M phase.","definition_xrefs":["GOC:jl","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase 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cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0044839","terms_by_termid":{"GO:0000086":null,"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0033315":null,"GO:0044878":null,"GO:0110031":null,"GO:0110032":null,"GO:1905287":null}}


id: MONDO:0018280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscle-eye-brain (MEB) disease with bilateral multicystic leucodystrophy is a form of congenital muscular alpha-dystroglycanopathy with brain and eye anomaly characterized by severe muscle-eye-brain disease-like phenotype associated with macrocephaly and extended bilateral multicystic white matter disease, overlapping with the cerebral findings in patients with megalencephalic leukoencephalopathy with subcortical cysts.","definition_xrefs":["Orphanet:370997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"},{"relation_name":"is_a","term_name":"cobblestone lissencephaly","termid":"MONDO:0018869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscle-eye-brain disease with bilateral multicystic leucodystrophy","secondary_identifiers":["GARD:17608","MEDGEN:1675257","UMLS:C5191414"],"synonyms":[{"name":"MEB disease with bilateral multicystic leucodystrophy","type":"exact"}],"termid":"MONDO:0018280","xrefs":{"Monarch":{"xref_id":"0018280"}}}


id: GO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Similar to cathepsin L, but with much less activity on the terminal bond of Z-Phe-Arg-NHMec, and more activity on the terminal bond of Z-Val-Val-Arg-Xaa compounds.","definition_xrefs":["EC:3.4.22.27"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin S activity (obsolete GO:0004218)","synonyms":[{"name":"cathepsin S activity","type":"exact"}],"termid":"GO:0004218"}


id: PBO:0050751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 13","termid":"PBO:0050751"}


id: PBO:0049691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid oxidase 1","termid":"PBO:0049691"}


id: FYPO:0003852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing FR901464.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on FR901464","synonyms":[{"name":"normal cell population growth in presence of FR901464","type":"exact"},{"name":"normal cell population growth on FR901464","type":"exact"},{"name":"normal cellular response to FR901464","type":"related"},{"name":"normal vegetative cell population growth on FR901464","type":"exact"}],"termid":"FYPO:0003852"}


id: SO:1000134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000134 sequence_variant_causing_polypeptide_fusion (obsolete SO:1000134)","synonyms":[{"name":"mutation causing polypeptide fusion","type":"related"},{"name":"sequence variant causing polypeptide fusion","type":"exact"}],"termid":"SO:1000134"}


id: SO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed pseudogene where there is evidence, (mass spec data) suggesting that it is also translated.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processed_pseudogene","termid":"SO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated_processed_pseudogene","synonyms":[{"name":"translated processed pseudogene","type":"exact"}],"termid":"SO:0002105"}


id: PBO:0091150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DUF4536, human DMAC1 ortholog, possibly has a general role in mitochondrial complex assembly","termid":"PBO:0091150"}


id: MONDO:0043969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasomnia characterized by paroxysmal episodes of choreoathetotic, ballistic, dystonic movements, and semipurposeful activity. The episodes occur during non-rapid eye movement sleep and typically recur several times per night.","definition_xrefs":["PMID:1630641","MESH:D020183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dystonic disorder","termid":"MONDO:0003441"},{"relation_name":"is_a","term_name":"sleep disorder","termid":"MONDO:0100081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"nocturnal paroxysmal dystonia","secondary_identifiers":["UMLS:C0393777","MEDGEN:95991","SCTID:230500006"],"synonyms":[{"name":"dystonia, hypnogenic paroxysmal","type":"exact"},{"name":"dystonia, nocturnal paroxysmal","type":"exact"},{"name":"dystonia, nocturnal, paroxysmal","type":"exact"},{"name":"dystonia, sleep-related","type":"exact"},{"name":"dystonias, hypnogenic paroxysmal","type":"exact"},{"name":"dystonias, nocturnal paroxysmal","type":"exact"},{"name":"dystonias, sleep-related","type":"exact"},{"name":"hypnogenic paroxysmal dystonia","type":"exact"},{"name":"hypnogenic paroxysmal dystonias","type":"exact"},{"name":"nocturnal paroxysmal dystonias","type":"exact"},{"name":"paroxysmal dystonia, hypnogenic","type":"exact"},{"name":"paroxysmal dystonia, nocturnal","type":"exact"},{"name":"paroxysmal dystonias, hypnogenic","type":"exact"},{"name":"paroxysmal dystonias, nocturnal","type":"exact"},{"name":"sleep related dystonia","type":"related"},{"name":"sleep-related dystonia","type":"related"},{"name":"sleep-related dystonias","type":"related"}],"termid":"MONDO:0043969","xrefs":{"Monarch":{"xref_id":"0043969"}}}


id: GO:1900667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocrocin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"endocrocin biosynthetic process","termid":"GO:1900602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of endocrocin biosynthetic process","synonyms":[{"name":"regulation of endocrocin anabolism","type":"exact"},{"name":"regulation of endocrocin biosynthesis","type":"exact"},{"name":"regulation of endocrocin formation","type":"exact"},{"name":"regulation of endocrocin synthesis","type":"exact"}],"termid":"GO:1900667"}


id: GO:0062027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:28007894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032436"},{"relation_name":"is_a","term_name":"regulation of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0062025"},{"relation_name":"positively_regulates","term_name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0031146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"positively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process","termid":"GO:0062027"}


id: MONDO:0019750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of urinary system disease that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare renal disease (obsolete MONDO:0019750)","secondary_identifiers":["Orphanet:93626"],"synonyms":[{"name":"rare kidney disease","type":"exact"},{"name":"rare urinary system disease","type":"exact"}],"termid":"MONDO:0019750","xrefs":{"Monarch":{"xref_id":"0019750"}}}


id: MONDO:0056803
data:
  {"annotated_genes":["SJAG_01417","SJAG_01612","SJAG_01351","SJAG_03701","SJAG_01995","SJAG_03641","SJAG_03712","SJAG_03290","SJAG_00582","SJAG_02397","SJAG_02007","SJAG_04425","SJAG_01216","SJAG_01466","SJAG_03553","SJAG_04016","SJAG_01162","SJAG_01199","SJAG_03556","SJAG_01070","SJAG_03316","SJAG_01147","SJAG_03659","SJAG_03222","SJAG_00988","SJAG_01164","SJAG_01063","SJAG_02306","SJAG_04459","SJAG_02895","SJAG_04042","SJAG_03671","SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009825"},{"annotations":[87549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[87243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009352"},{"annotations":[86938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009058"},{"annotations":[88956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[88146,88147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009285"},{"annotations":[87821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[87694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[88131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[88793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[88198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[87187,87188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[88846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"},{"annotations":[88570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[87359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[87885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009607"},{"annotations":[87164,87165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[87060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[88779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0975806"},{"annotations":[87587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[87940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[87208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[87274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[87913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[88265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"},{"annotations":[88935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971174"},{"annotations":[87127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[87713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"},{"annotations":[87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009593"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of sulfur compound metabolic process.","definition_xrefs":["MONDO:patterns/disrupts_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism 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disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:688004","SCTID:123809005","UMLS:C1263724"],"synonyms":[{"name":"disorder of sulfur compound metabolic process","type":"exact"},{"name":"disorder of sulfur metabolic process","type":"exact"},{"name":"disorder of sulfur metabolism","type":"exact"},{"name":"disorder of sulphur compound metabolic process","type":"exact"},{"name":"disorder of sulphur metabolic process","type":"exact"},{"name":"disorder of sulphur metabolism","type":"exact"},{"name":"sulfur compound metabolic process disease","type":"exact"},{"name":"sulphur compound metabolic process disease","type":"exact"}],"termid":"MONDO:0056803","terms_by_termid":{"MONDO:0009058":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009285":null,"MONDO:0009352":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009529":null,"MONDO:0009593":null,"MONDO:0009607":null,"MONDO:0009609":null,"MONDO:0009666":null,"MONDO:0009825":null,"MONDO:0009947":null,"MONDO:0010184":null,"MONDO:0011582":null,"MONDO:0013404":null,"MONDO:0013675":null,"MONDO:0013762":null,"MONDO:0014132":null,"MONDO:0014576":null,"MONDO:0014611":null,"MONDO:0014803":null,"MONDO:0015003":null,"MONDO:0019531":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0100255":null,"MONDO:0957382":null,"MONDO:0971174":null,"MONDO:0975806":null},"xrefs":{"Monarch":{"xref_id":"0056803"}}}


id: PBO:0050417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D pseudogene 1","termid":"PBO:0050417"}


id: PBO:0090183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, FAD Flx1","termid":"PBO:0090183"}


id: PBO:0044211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin V","termid":"PBO:0044211"}


id: PR:Q9UUG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tuberin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10063:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberous sclerosis 2 protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.13c","secondary_identifiers":["UniProtKB:Q9UUG9"],"synonyms":[{"name":"SPAC630.13c","type":"related"},{"name":"Spom972h-TSC2","type":"exact"}],"termid":"PR:Q9UUG9"}


id: PBO:0059872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 9 like, pseudogene","termid":"PBO:0059872"}


id: MONDO:0004237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare poorly differentiated morphologic variant of large cell lung carcinoma characterized by the presence of rhabdoid cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"large cell carcinoma with rhabdoid phenotype","secondary_identifiers":["NCIT:C6876","MEDGEN:226828","ONCOTREE:RLCLC","UMLS:C1265997","ICDO:8014/3","DOID:7480"],"synonyms":[{"name":"RLCLC","type":"related"},{"name":"large cell carcinoma with rhabdoid phenotype (morphologic abnormality)","type":"exact"},{"name":"large cell lung carcinoma with rhabdoid phenotype","type":"exact"}],"termid":"MONDO:0004237","xrefs":{"Monarch":{"xref_id":"0004237"}}}


id: PBO:0081279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF45 antisense RNA 1","termid":"PBO:0081279"}


id: GO:1900162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phospholipid scramblase activity (obsolete GO:1900162)","synonyms":[{"name":"down regulation of phospholipid scramblase activity","type":"exact"},{"name":"down-regulation of phospholipid scramblase activity","type":"exact"},{"name":"downregulation of phospholipid scramblase activity","type":"exact"},{"name":"inhibition of phospholipid scramblase activity","type":"narrow"}],"termid":"GO:1900162"}


id: PBO:0028117
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0028117"}


id: MONDO:0002612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localization-related (focal) form of epilepsy characterized by seizures which arise in the frontal lobe. A variety of clinical syndromes exist depending on the exact location of the seizure focus. Frontal lobe seizures may be idiopathic (cryptogenic) or caused by an identifiable disease process such as traumatic injuries, neoplasms, or other macroscopic or microscopic lesions of the frontal lobes (symptomatic frontal lobe seizures). (From Adams et al., Principles of Neurology, 6th ed, pp318-9)","definition_xrefs":["MESH:D017034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"frontal lobe epilepsy","secondary_identifiers":["SCTID:230394006","UMLS:C0085541","DOID:3331","MEDGEN:39074"],"synonyms":[{"name":"epilepsy of frontal lobe","type":"exact"},{"name":"frontal lobe epilepsy","type":"exact"}],"termid":"MONDO:0002612","xrefs":{"Monarch":{"xref_id":"0002612"}}}


id: PR:Q9UT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC513.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C513.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.07","synonyms":[{"name":"Spom972h-SPAC513.07","type":"exact"}],"termid":"PR:Q9UT59"}


id: PBO:0119995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCM2L antisense RNA 1","termid":"PBO:0119995"}


id: GO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete barbed-end actin capping/severing activity (obsolete GO:0003784)","synonyms":[{"name":"barbed-end actin capping/severing activity","type":"exact"}],"termid":"GO:0003784"}


id: MONDO:0017310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marfan and Marfan-related disorder","secondary_identifiers":["Orphanet:284993","GARD:21129","UMLS:C5681015","MEDGEN:1842966"],"termid":"MONDO:0017310","xrefs":{"Monarch":{"xref_id":"0017310"}}}


id: MONDO:0023011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson-Mikity syndrome","secondary_identifiers":["ICD10CM:P27.0","SCTID:51577008","UMLS:C0270171","icd11.foundation:846899990","GARD:10495","MEDGEN:78714"],"synonyms":[{"name":"Pulmonary dysmaturity","type":"related"},{"name":"Pulmonary dysmaturity syndrome","type":"related"},{"name":"Wilson-Mikity syndrome","type":"exact"},{"name":"pulmonary dysmaturity","type":"related"},{"name":"wilson-mikity syndrome","type":"exact"}],"termid":"MONDO:0023011","xrefs":{"Monarch":{"xref_id":"0023011"}}}


id: FYPO:0007794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to oxidative stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:10428959","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to oxidative stress","synonyms":[{"name":"RNA absent from cell during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"transcripts absent from cell during cellular response to oxidative stress","type":"exact"},{"name":"undetectable RNA level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007794"}


id: GO:0097435
data:
  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process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a supramolecular fiber, a polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component 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id: FYPO:0006622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of binding to double-stranded DNA containing a G/T mispair by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000653"],"is_obsolete":false,"name":"decreased T-G mismatch DNA binding","synonyms":[{"name":"decreased G/T mispair binding","type":"exact"},{"name":"decreased T/G mispair binding","type":"exact"},{"name":"decreased guanine/thymine mispair binding","type":"exact"},{"name":"decreased thymine/guanine mispair binding","type":"exact"},{"name":"reduced T-G mismatch DNA binding","type":"exact"}],"termid":"FYPO:0006622"}


id: GO:0070394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["GOC:add","PMID:14665680","PMID:16020688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoteichoic acid metabolic process","synonyms":[{"name":"LTA metabolic process","type":"exact"},{"name":"lipoteichoic acid metabolism","type":"exact"}],"termid":"GO:0070394"}


id: MONDO:0000947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sexual disorder","termid":"MONDO:0000595"},{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychosexual disorder","secondary_identifiers":["MEDGEN:18747","DOID:10132","UMLS:C0033953","ICD9:302.89","ICD9:302.79","ICD9:302.9","SCTID:56627002"],"synonyms":[{"name":"non-organic sexual dysfunction","type":"related"}],"termid":"MONDO:0000947","xrefs":{"Monarch":{"xref_id":"0000947"}}}


id: MONDO:0021750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pus within the collecting system of the kidney.","definition_xrefs":["NCIT:C123032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pyonephrosis","secondary_identifiers":["SCTID:48631008","UMLS:C0034216","MEDGEN:11051","MESH:D053018","ICD10CM:N13.6","icd11.foundation:809412333"],"synonyms":[{"name":"Hydronephrosis, Infected","type":"related"},{"name":"Infected Hydronephrosis","type":"related"},{"name":"Pyonephrosis","type":"related"},{"name":"pyonephrosis","type":"exact"}],"termid":"MONDO:0021750","xrefs":{"Monarch":{"xref_id":"0021750"}}}


id: MONDO:0011820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, isolated, susceptibility to, 2","secondary_identifiers":["UMLS:C1846366","MEDGEN:375871","OMIM:607354"],"synonyms":[{"name":"IS2","type":"exact"},{"name":"scoliosis, idiopathic 2","type":"exact"},{"name":"scoliosis, isolated, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0011820","xrefs":{"Monarch":{"xref_id":"0011820"}}}


id: MONDO:0000782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A fruit allergy triggered by Ziziphus mauritiana plant fruit food product.","definition_xrefs":["DOID:0060507"],"gene_count":0,"genotype_count":0,"name":"obsolete Indian plum allergy (obsolete MONDO:0000782)","synonyms":[{"name":"Ziziphus mauritiana fruit allergy","type":"exact"}],"termid":"MONDO:0000782","xrefs":{"Monarch":{"xref_id":"0000782"}}}


id: PR:P0CT61
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2302 gene.","definition_xrefs":["UniProtKB:P0CT61","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L23-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.11","synonyms":[{"name":"Spom972h-rpl2302","type":"exact"}],"termid":"PR:P0CT61"}


id: PBO:0055076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2493","termid":"PBO:0055076"}


id: PBO:0081737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 668","termid":"PBO:0081737"}


id: GO:0070668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of mast cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte proliferation","termid":"GO:0070665"},{"relation_name":"is_a","term_name":"regulation of mast cell proliferation","termid":"GO:0070666"},{"relation_name":"positively_regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell proliferation","synonyms":[{"name":"activation of mast cell proliferation","type":"narrow"},{"name":"stimulation of mast cell proliferation","type":"narrow"},{"name":"up regulation of mast cell proliferation","type":"exact"},{"name":"up-regulation of mast cell proliferation","type":"exact"},{"name":"upregulation of mast cell proliferation","type":"exact"}],"termid":"GO:0070668"}


id: GO:0047580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hydroxy-L-proline = cis-4-hydroxy-D-proline.","definition_xrefs":["EC:5.1.1.8","RHEA:21152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"4-hydroxyproline epimerase activity","secondary_identifiers":["MetaCyc:4-HYDROXYPROLINE-EPIMERASE-RXN","KEGG_REACTION:R03296"],"synonyms":[{"name":"4-hydroxyproline 2-epimerase activity","type":"related"},{"name":"L-hydroxyproline epimerase activity","type":"related"},{"name":"hydroxyproline 2-epimerase activity","type":"related"},{"name":"hydroxyproline epimerase activity","type":"related"}],"termid":"GO:0047580"}


id: GO:0030147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of renal sodium excretion.","definition_xrefs":["ISBN:0198506732","GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete natriuresis (obsolete GO:0030147)","secondary_identifiers":["Wikipedia:Natriuresis"],"synonyms":[{"name":"natriuresis","type":"exact"}],"termid":"GO:0030147"}


id: MONDO:0011147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which some or all of the cells of the body contain extra genetic material from chromosome 18. Clinical features of this condition may include the following: spina bifida, hearing loss, cleft lip, cleft palate, undescended testes, rocker bottom feet, micrognathia, low set ears, cardiac anomalies (ventricular septal defect, atrial septal defect, patent ductus arteriosus, tetralogy of Fallot), intellectual disability, holoprosencephaly, pituitary dysplasia, seizures, autoimmune disorders, hip dysplasia, and/or congenital cataracts.","definition_xrefs":["NCIT:C84522"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of chromosome 18","termid":"MONDO:0016880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18q deletion syndrome","secondary_identifiers":["GARD:10865","ICD9:758.39","NANDO:2201291","NORD:946","UMLS:C0432443","OMIM:601808","MEDGEN:96605","NANDO:1200579","icd11.foundation:1121828795","MESH:C536580","Orphanet:1600","SCTID:270889005","Orphanet:262146","DOID:0060407"],"synonyms":[{"name":"18Q syndrome","type":"exact"},{"name":"18Q- syndrome","type":"related"},{"name":"18q deletion syndrome","type":"exact"},{"name":"18q-syndrome","type":"exact"},{"name":"Chromosome 18q- Syndrome","type":"exact"},{"name":"chromosome 18Q- syndrome","type":"related"},{"name":"chromosome 18q deletion","type":"related"},{"name":"chromosome 18q deletion syndrome","type":"exact"},{"name":"deletion 18q","type":"exact"},{"name":"deletion 18q syndrome","type":"exact"},{"name":"monosomy 18q","type":"exact"},{"name":"monosomy 18q syndrome","type":"related"},{"name":"monosomy type 18q","type":"exact"},{"name":"partial deletion of chromosome 18q","type":"exact"},{"name":"partial deletion of the long arm of chromosome 18","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 18","type":"exact"},{"name":"partial monosomy of chromosome 18q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 18","type":"exact"},{"name":"proximal 18q deletion","type":"narrow"},{"name":"proximal 18q deletion syndrome","type":"narrow"},{"name":"proximal 18q-","type":"narrow"},{"name":"proximal chromosome 18q deletion syndrome","type":"narrow"}],"termid":"MONDO:0011147","xrefs":{"Monarch":{"xref_id":"0011147"}}}


id: PBO:0060964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFU1 iron-sulfur cluster scaffold pseudogene 1","termid":"PBO:0060964"}


id: GO:0016576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of phosphate groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone dephosphorylation (obsolete GO:0016576)","termid":"GO:0016576"}


id: GO:0032195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["PMID:9394012","PMID:23494323","PMID:9276759","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"},{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005773","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"post-lysosomal vacuole","synonyms":[{"name":"post-lysosome","type":"exact"},{"name":"postlysosome","type":"exact"}],"termid":"GO:0032195"}


id: GO:1900024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substrate adhesion-dependent cell spreading.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"substrate adhesion-dependent cell spreading","termid":"GO:0034446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of substrate adhesion-dependent cell spreading","synonyms":[{"name":"regulation of cell spreading during cell substrate adhesion","type":"exact"},{"name":"regulation of substrate adhesion dependent cell spreading","type":"exact"}],"termid":"GO:1900024"}


id: GO:2000354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovarian follicle development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ovarian follicle development","synonyms":[{"name":"regulation of follicular phase","type":"related"}],"termid":"GO:2000354"}


id: PBO:0044753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD-box helicase 39B","termid":"PBO:0044753"}


id: PBO:0055449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2881","termid":"PBO:0055449"}


id: MONDO:0024466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated hereditary congenital facial paralysis","termid":"MONDO:0011090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"facial paresis, hereditary congenital, 1","secondary_identifiers":["UMLS:C1832284","MEDGEN:371292","OMIM:601471"],"synonyms":[{"name":"HCFP1","type":"exact"},{"name":"Mobius syndrome 2","type":"related"},{"name":"Mobius syndrome 2, formerly","type":"related"},{"name":"Moebius syndrome 2","type":"related"},{"name":"Moebius syndrome 2, formerly","type":"related"},{"name":"facial palsy, congenital, unilateral or bilateral","type":"related"},{"name":"facial paresis, hereditary congenital, 1","type":"exact"}],"termid":"MONDO:0024466","xrefs":{"Monarch":{"xref_id":"0024466"}}}


id: PBO:0068567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 18, pseudogene","termid":"PBO:0068567"}


id: PBO:0043501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein 2","termid":"PBO:0043501"}


id: PBO:0040130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASB15 antisense RNA 1","termid":"PBO:0040130"}


id: PBO:0053393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 322","termid":"PBO:0053393"}


id: MONDO:0020087
data:
  {"annotated_genes":["SJAG_01537","SJAG_03396","SJAG_01957","SJAG_00946","SJAG_04934"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012071"},{"annotations":[87009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010020"},{"annotations":[88031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958023"},{"annotations":[88569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012074"},{"annotations":[88199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014402"},{"annotations":[88083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009910"}]},"cv_name":"mondo","definition":"An instance of lipodystrophy that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00946":null,"SJAG_01537":null,"SJAG_01957":null,"SJAG_03396":null,"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"hereditary lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12597","UMLS:C4511302","Orphanet:98305","SCTID:724841000","icd11.foundation:1166232738","MEDGEN:1383706"],"synonyms":[{"name":"genetic lipodystrophy","type":"exact"},{"name":"genetic lipodystrophy (disease)","type":"exact"}],"termid":"MONDO:0020087","terms_by_termid":{"MONDO:0009910":null,"MONDO:0010020":null,"MONDO:0012071":null,"MONDO:0012074":null,"MONDO:0014402":null,"MONDO:0958023":null},"xrefs":{"Monarch":{"xref_id":"0020087"}}}


id: MOD:00605
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative, C-Terminal/Glutamate/Aspartate sulfonation","definition_xrefs":["Unimod:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:00605"}


id: GO:1903295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutamate secretion, neurotransmission.","definition_xrefs":["PMID:16782817","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glutamate secretion","termid":"GO:0014050"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, glutamatergic","termid":"GO:0051967"},{"relation_name":"is_a","term_name":"regulation of glutamate secretion, neurotransmission","termid":"GO:1903294"},{"relation_name":"negatively_regulates","term_name":"glutamate secretion, neurotransmission","termid":"GO:0061535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamate secretion, neurotransmission","synonyms":[{"name":"down regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"down-regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"downregulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"inhibition of glutamate secretion, neurotransmission","type":"narrow"}],"termid":"GO:1903295"}


id: PBO:0078287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 20-1","termid":"PBO:0078287"}


id: PBO:0047935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(12)(q24.13)","termid":"PBO:0047935"}


id: GO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"carbohydrate phosphorylation","termid":"GO:0046835"}


id: PBO:0087231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seipin involved in lipid droplet (LD) assembly; controls lipid particle morphology, number, and size; promotes initiation of LD formation on the ER; ensures that LDs bud from the ER towards the cytosolic side of the membrane; forms a complex with Ldb16p at ER-LD contact sites, stabilizing these sites; null mutants have localized accumulation of phosphatidic acid (PA) marker proteins; BSCL2, human homolog implicated in congenital lipodystrophy, complements yeast null mutant","termid":"PBO:0087231"}


id: PBO:0072937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 17","termid":"PBO:0072937"}


id: GO:0032432
data:
  {"annotated_genes":["SJAG_02864","SJAG_04887","SJAG_00938","SJAG_01739","SJAG_03088","SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73348,79142,121494],"is_not":false,"summary":null,"term":"GO:0032432"},{"annotations":[121541,100231,110101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070648"},{"annotations":[67436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001725"}]},"cv_name":"cellular_component","definition":"An assembly of actin filaments that are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01739":null,"SJAG_02864":null,"SJAG_03088":null,"SJAG_04621":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin filament bundle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:27734801":null,"PMID:36148799":null},"secondary_identifiers":["GO:0030482","GO:0000141"],"synonyms":[{"name":"actin cable","type":"related"}],"termid":"GO:0032432","terms_by_termid":{"GO:0001725":null,"GO:0032432":null,"GO:0070648":null}}


id: GO:0048255
data:
  {"annotated_genes":["SJAG_03283","SJAG_03696","SJAG_00797","SJAG_04825","SJAG_04946","SJAG_02573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72522,91434],"is_not":false,"summary":null,"term":"GO:0048255"},{"annotations":[92137,80636,80596,102054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"}]},"cv_name":"biological_process","definition":"Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"is_a","term_name":"RNA stabilization","termid":"GO:0043489"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mRNA stabilization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048255","terms_by_termid":{"GO:0048255":null,"GO:0070935":null}}


id: GO:1903305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GOC:pad","PMID:12526776","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of regulated secretory pathway","termid":"GO:1903305"}


id: GO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the melanosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"melanosome","termid":"GO:0042470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"melanosome lumen","termid":"GO:0034493"}


id: MONDO:0971152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 125","secondary_identifiers":["OMIM:620877","MEDGEN:1861028","DOID:0061124","UMLS:C5935633"],"synonyms":[{"name":"deafness, autosomal recessive 125","type":"narrow"}],"termid":"MONDO:0971152","xrefs":{"Monarch":{"xref_id":"0971152"}}}


id: PBO:0079339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 23B","termid":"PBO:0079339"}


id: PBO:0058357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4730","termid":"PBO:0058357"}


id: PBO:0051867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon stimulated exonuclease gene 20 like 2","termid":"PBO:0051867"}


id: GO:0035973
data:
  {"annotated_genes":["SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78900],"is_not":false,"summary":null,"term":"GO:0035973"}]},"cv_name":"biological_process","definition":"The selective degradation of protein aggregates by macroautophagy.","definition_xrefs":["GOC:kmv","PMID:25062811","PMID:18508269","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"aggrephagy","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0035972","Reactome:R-HSA-9646399"],"termid":"GO:0035973","terms_by_termid":{"GO:0035973":null}}


id: GO:0043716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-5-methylsulfanyl-3-oxopent-1-enyl phosphate + H2O = 1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + phosphate.","definition_xrefs":["RHEA:14481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R07394","EC:3.1.3.87","MetaCyc:R83-RXN"],"synonyms":[{"name":"2-hydroxy-3-keto-5-methylthio-phosphopentene phosphatase activity","type":"exact"},{"name":"HK-MTPenyl-1-P phosphatase activity","type":"exact"}],"termid":"GO:0043716"}


id: GO:0060746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive behavior in which a parent cares for and rears offspring.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive behavior","termid":"GO:0019098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parental behavior","termid":"GO:0060746"}


id: PATO:0000782
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000782 defensive function value (obsolete PATO:0000782)","termid":"PATO:0000782"}


id: FYPO:0003080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"abolished genetic imprinting at mating-type locus","synonyms":[{"name":"abolished genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"genetic imprinting at mating-type locus abolished","type":"exact"},{"name":"genetic imprinting at mating-type locus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003080"}


id: PBO:0086068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that localizes to mitochondria; overexpression affects endocytic protein trafficking; YDR514C has a paralog, GFD2, that arose from the whole genome duplication","termid":"PBO:0086068"}


id: PBO:0052905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-2","termid":"PBO:0052905"}


id: GO:1901965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endoplasmic reticulum to chloroplast.","definition_xrefs":["PMID:18689504","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"endoplasmic reticulum to chloroplast transport","synonyms":[{"name":"ER to chloroplast transport","type":"exact"}],"termid":"GO:1901965"}


id: PBO:0052678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 46","termid":"PBO:0052678"}


id: PBO:0057369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ak","termid":"PBO:0057369"}


id: MONDO:0020578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Abnormally low level of 25-hydroxyvitamin D in the blood.","gene_count":0,"genotype_count":0,"name":"obsolete vitamin D deficiency (obsolete MONDO:0020578)","termid":"MONDO:0020578","xrefs":{"Monarch":{"xref_id":"0020578"}}}


id: MONDO:0043424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral, bacterial, fungal, or parasitic infectious process that affects the digestive system.","definition_xrefs":["NCIT:C35503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"digestive system infectious disorder","secondary_identifiers":["SCTID:715852004"],"synonyms":[{"name":"digestive system infection","type":"exact"},{"name":"gastrointestinal infection","type":"exact"},{"name":"gastrointestinal system infection","type":"exact"},{"name":"infection of gastrointestinal tract","type":"related"}],"termid":"MONDO:0043424","xrefs":{"Monarch":{"xref_id":"0043424"}}}


id: PBO:0058911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12129","termid":"PBO:0058911"}


id: PBO:0005669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic aspartate-tRNA ligase Drs1 (predicted)","termid":"PBO:0005669"}


id: FYPO:0003891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PMID:11104907","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal intragenic meiotic recombination","synonyms":[{"name":"normal meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0003891"}


id: PBO:0066057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 2","termid":"PBO:0066057"}


id: GO:0070682
data:
  {"annotated_genes":["SJAG_04844","SJAG_00954","SJAG_02570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81968,101434,117737],"is_not":false,"summary":null,"term":"GO:0070682"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a mature, active proteasome regulatory particle complex.","definition_xrefs":["GOC:mah","GOC:rb","PMID:19412159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome assembly","termid":"GO:0043248"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00954":null,"SJAG_02570":null,"SJAG_04844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"proteasome regulatory particle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"proteasome regulatory complex assembly","type":"exact"}],"termid":"GO:0070682","terms_by_termid":{"GO:0070682":null}}


id: GO:0042912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a colicin from one side of a membrane to the other. Colicins are a group of antibiotics produced by E. coli and related species that are encoded by a group of naturally occurring plasmids, e.g. Col E1.","definition_xrefs":["PMID:17347522","GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriocin transmembrane transporter activity","termid":"GO:0022885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"colicin transmembrane transporter activity","termid":"GO:0042912"}


id: FYPO:0003837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA polymerase II carboxy-terminal domain kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased RNA polymerase II carboxy-terminal domain kinase activity","termid":"FYPO:0003837"}


id: FYPO:0002887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to telomere during vegetative growth","synonyms":[{"name":"normal protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"normal protein localisation to telomere during vegetative growth","type":"exact"},{"name":"normal protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"normal protein localization to telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002887"}


id: GO:0140673
data:
  {"annotated_genes":["SJAG_00914","SJAG_02319","SJAG_02314","SJAG_03006","SJAG_02698","SJAG_00293","SJAG_00913","SJAG_04038","SJAG_00320","SJAG_02416","SJAG_04670","SJAG_02873","SJAG_00925","SJAG_03128","SJAG_04257"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92011,93189,94327,95337,96559,97433,105517,110755,110760,113267,115603,116540,118209,118904,120866],"is_not":false,"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process that reestablishes the chromatin structure following the passage of RNA polymerase II during transcription elongation, thus preventing cryptic transcription initiation.","definition_xrefs":["PMID:28053344","PMID:22922743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02416":null,"SJAG_02698":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03128":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04670":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription elongation-coupled chromatin remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication-independent chromatin organization","type":"related"},{"name":"chromatin maintenance during transcription elongation","type":"related"},{"name":"co-transcriptional chromatin reassembly","type":"exact"},{"name":"euchromatin maintenance during transcription elongation","type":"exact"},{"name":"maintenance of chromatin integrity during transcription elongation by RNAPII","type":"exact"},{"name":"maintenance of transcriptionally active chromatin during transcription elongation","type":"exact"},{"name":"transcription elongation coupled chromatin remodeling","type":"exact"},{"name":"transcriptional elongation-coupled chromatin remodeling","type":"exact"}],"termid":"GO:0140673","terms_by_termid":{"GO:0140673":null}}


id: FYPO:0002148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of abnormal morphology (i.e. size, shape, or structure) that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, abnormal morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, abnormal morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, abnormal morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, abnormal morphology","type":"exact"}],"termid":"FYPO:0002148"}


id: FYPO:0003697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which one or more extensions of the cell wall protrude into the cytoplasm. The cell wall extensions do not form a normal septum.","definition_xrefs":["PomBase:mah","PMID:9211982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology during vegetative growth","termid":"FYPO:0000351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"cell wall invagination into cytoplasm","synonyms":[{"name":"cell wall invagination into cytoplasm during mitotic cell cycle","type":"related"},{"name":"cell wall invagination into cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0003697"}


id: MONDO:0004095
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A group of heterogeneous lymphoid tumors generally expressing one or more B-cell antigens or representing malignant transformations of B-lymphocytes.","definition_xrefs":["MESH:D016393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5877","NCIT:C27907","UMLS:C0079731","MEDGEN:86953","DOID:707"],"synonyms":[{"name":"B-cell lymphocytic neoplasm","type":"exact"},{"name":"B-cell lymphoma","type":"related"},{"name":"B-cell neoplasm","type":"exact"},{"name":"lymphoma, B-cell","type":"related"}],"termid":"MONDO:0004095","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0004095"}}}


id: FYPO:0007254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing is normal (i.e. indistinguishable from wild type). Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["PomBase:mah","GO:0031297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000293","FYPO:0000257"],"is_obsolete":false,"name":"normal replication fork processing","synonyms":[{"name":"normal HR-mediated fork restart","type":"related"},{"name":"normal collapsed replication fork processing","type":"exact"},{"name":"normal recovery from replication fork arrest","type":"exact"},{"name":"normal recovery from replication fork stalling","type":"exact"},{"name":"normal replication fork processing during mitotic cell cycle","type":"related"},{"name":"normal replication fork processing during vegetative growth","type":"exact"},{"name":"normal replication fork restart","type":"related"},{"name":"normal replication restart","type":"related"}],"termid":"FYPO:0007254"}


id: PR:O74831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A frataxin, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16821:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.03c","secondary_identifiers":["UniProtKB:O74831"],"synonyms":[{"name":"Spom972h-FXN","type":"exact"}],"termid":"PR:O74831"}


id: PR:Q10354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 35 member C2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C22E12.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.01","secondary_identifiers":["UniProtKB:Q10354"],"synonyms":[{"name":"Spom972h-SLC35C2","type":"exact"}],"termid":"PR:Q10354"}


id: PBO:0044737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 5","termid":"PBO:0044737"}


id: PBO:0083170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely contained within the verified gene GRS1; identified by expression profiling and mass spectrometry","termid":"PBO:0083170"}


id: MONDO:0019751
data:
  {"annotated_genes":["SJAG_04865","SJAG_04290","SJAG_03151","SJAG_00853","SJAG_00400","SJAG_02763","SJAG_04541","SJAG_01474","SJAG_02039","SJAG_04077","SJAG_03596","SJAG_01884","SJAG_03805","SJAG_04118","SJAG_05239","SJAG_04380","SJAG_04969","SJAG_04569","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[87090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[87093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[87181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[89222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[89177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013944"},{"annotations":[87944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[88571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[88675,88674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[87805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"},{"annotations":[86975,86974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[88670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[88478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[87344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[89117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0968983"},{"annotations":[87043,87042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011462"},{"annotations":[88349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[88200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[87811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026777"},{"annotations":[87562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","definition":"A group of disorders of the innate immune system characterized by attacks of seemingly unprovoked inflammation without significant levels of either autoantibodies or autoreactive T cells more characteristic of autoimmune disease.","definition_xrefs":["NCIT:C119050","PMID:23827249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_00400":null,"SJAG_00853":null,"SJAG_01474":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02763":null,"SJAG_03151":null,"SJAG_03596":null,"SJAG_03805":null,"SJAG_04077":null,"SJAG_04118":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04865":null,"SJAG_04969":null,"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10072220","MEDGEN:855741","Orphanet:93665","DOID:0051000","NANDO:2100156","UMLS:C3890737","GARD:19234","ICD10CM:M04-M04"],"termid":"MONDO:0019751","terms_by_termid":{"MONDO:0007483":null,"MONDO:0009849":null,"MONDO:0010523":null,"MONDO:0011462":null,"MONDO:0012316":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0012481":null,"MONDO:0013766":null,"MONDO:0013818":null,"MONDO:0013944":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0024541":null,"MONDO:0026777":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null,"MONDO:0968983":null},"xrefs":{"Monarch":{"xref_id":"0019751"}}}


id: FYECO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cyanide-p-trifluoromethoxyphenylhydrazone was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FCCP","secondary_identifiers":["PMID:37590302"],"synonyms":[{"name":"carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"}],"termid":"FYECO:0000436"}


id: MONDO:0800137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A monogenic autoinflammatory disorder caused by a de novo activating mutation, p.Tyr515∗, in hematopoietic cell kinase (HCK). The disease is characterized by cutaneous vasculitis and chronic pulmonary inflammation that progresses to fibrosis.","definition_xrefs":["PMID:34536415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset pulmonary and cutaneous vasculitis","termid":"MONDO:0800137","xrefs":{"Monarch":{"xref_id":"0800137"}}}


id: GO:1904762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myofibroblast differentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","PMID:20533548","GOC:rph","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of myofibroblast differentiation","termid":"GO:1904760"},{"relation_name":"positively_regulates","term_name":"myofibroblast differentiation","termid":"GO:0036446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myofibroblast differentiation","synonyms":[{"name":"activation of myofibroblast cell differentiation","type":"narrow"},{"name":"activation of myofibroblast differentiation","type":"narrow"},{"name":"positive regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up regulation of myofibroblast differentiation","type":"exact"},{"name":"up-regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up-regulation of myofibroblast differentiation","type":"exact"},{"name":"upregulation of myofibroblast cell differentiation","type":"exact"},{"name":"upregulation of myofibroblast differentiation","type":"exact"}],"termid":"GO:1904762"}


id: MOD:00486
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:114#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin-LC-hydrazide, reduced","synonyms":[{"name":"OxProBiotinRed","type":"related"},{"name":"Oxidized proline biotinylated with biotin-LC-hydrazide, reduced","type":"related"}],"termid":"MOD:00486"}


id: GO:0008227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular amine and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled amine receptor activity","synonyms":[{"name":"G-protein coupled amine receptor activity","type":"exact"},{"name":"amine receptor activity, G-protein coupled","type":"exact"},{"name":"biogenic amine receptor","type":"narrow"}],"termid":"GO:0008227"}


id: GO:0005700
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of chromosome in a polyploid cell, formed when multiple copies of homologous chromosomes are aligned side by side to give a giant chromosome in which distinct chromosome bands are readily visible.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"polytene chromosome","secondary_identifiers":["Wikipedia:Polytene_chromosome"],"termid":"GO:0005700"}


id: PBO:0083444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified essential ORF SPC110/YDR356W","termid":"PBO:0083444"}


id: PBO:0027380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nuclear_pore_aggregation_in_cytoplasm","termid":"PBO:0027380"}


id: PBO:0090989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk15","termid":"PBO:0090989"}


id: PBO:0026697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_melibiose_carbon_source","termid":"PBO:0026697"}


id: FYPO:0006884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is thicker than normal during mitotic metaphase.","definition_xrefs":["PMID:30463883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0001320","FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"thick mitotic spindle during mitotic metaphase","synonyms":[{"name":"increased mitotic spindle thickness during mitotic metaphase","type":"exact"},{"name":"thick mitotic spindle during mitotic metaphase during vegetative growth","type":"exact"},{"name":"thick spindle during mitotic metaphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006884"}


id: PBO:0017857
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of maltose to glucose is 14.5 (uM min-1 ml-2)","termid":"PBO:0017857"}


id: PBO:0063292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 6","termid":"PBO:0063292"}


id: MOD:01217
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:12872131","Unimod:285#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), light C12","termid":"MOD:00605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12 - site D","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:01217"}


id: MONDO:1011585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pituitary-dependent hyperadrenocorticism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"pituitary-dependent hyperadrenocorticism, non-human animal","termid":"MONDO:1011400"},{"relation_name":"is_a","term_name":"hyperadrenocorticism, dog","termid":"MONDO:1011530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary-dependent hyperadrenocorticism, dog","secondary_identifiers":["OMIA:000247-9615"],"termid":"MONDO:1011585","xrefs":{"Monarch":{"xref_id":"1011585"}}}


id: GO:1903536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:12018418","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of lactose biosynthetic process","termid":"GO:1903534"},{"relation_name":"positively_regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of lactose biosynthetic process","synonyms":[{"name":"activation of lactose anabolism","type":"narrow"},{"name":"activation of lactose biosynthesis","type":"narrow"},{"name":"activation of lactose biosynthetic process","type":"narrow"},{"name":"activation of lactose formation","type":"narrow"},{"name":"activation of lactose synthesis","type":"narrow"},{"name":"positive regulation of lactose anabolism","type":"exact"},{"name":"positive regulation of lactose biosynthesis","type":"exact"},{"name":"positive regulation of lactose formation","type":"exact"},{"name":"positive regulation of lactose synthesis","type":"exact"},{"name":"up regulation of lactose anabolism","type":"exact"},{"name":"up regulation of lactose biosynthesis","type":"exact"},{"name":"up regulation of lactose biosynthetic process","type":"exact"},{"name":"up regulation of lactose formation","type":"exact"},{"name":"up regulation of lactose synthesis","type":"exact"},{"name":"up-regulation of lactose anabolism","type":"exact"},{"name":"up-regulation of lactose biosynthesis","type":"exact"},{"name":"up-regulation of lactose biosynthetic process","type":"exact"},{"name":"up-regulation of lactose formation","type":"exact"},{"name":"up-regulation of lactose synthesis","type":"exact"},{"name":"upregulation of lactose anabolism","type":"exact"},{"name":"upregulation of lactose biosynthesis","type":"exact"},{"name":"upregulation of lactose biosynthetic process","type":"exact"},{"name":"upregulation of lactose formation","type":"exact"},{"name":"upregulation of lactose synthesis","type":"exact"}],"termid":"GO:1903536"}


id: GO:0071945
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates flagellum-dependent motility in bacteria by modulating the speed or direction of rotation of a rotary flagellar motor, mediated by interactions between the braking protein.","definition_xrefs":["GOC:jl","PMID:20371342","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bacterial-type flagellum-dependent cell motility","termid":"GO:1902021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed","synonyms":[{"name":"regulation of bacterial-type flagellar cell motility by regulation of motor speed","type":"related"},{"name":"regulation of bacterial-type flagellum cell motility by regulation of motor speed","type":"exact"},{"name":"regulation of flagellar cell motility by regulation of motor speed","type":"broad"}],"termid":"GO:0071945"}


id: PBO:0062604
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Q member 1","termid":"PBO:0062604"}


id: SO:0000471
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoregulated","termid":"SO:0000471"}


id: PBO:0087449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that associates with actin filaments; forms a complex with Aim21p that inhibits barbed end F-actin assembly; elevates actin monomer pools to increase endocytotic efficiency and to regulate the distribution of actin between cables and patches; Aim21p/Tda2p forms a larger complex with actin capping proteins Cap1p and Cap2p; TcTex1-type dynein light chain family member; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0087449"}


id: GO:0140628
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an outwardly rectifying potassium channel.","definition_xrefs":["PMID:28108814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"outward rectifier potassium channel inhibitor activity","termid":"GO:0140628"}


id: PBO:0090837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N7-)-methyltransferase catalytic subunit Trm8","termid":"PBO:0090837"}


id: PBO:0109140
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3110","termid":"PBO:0109140"}


id: PBO:0041967
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 9B","termid":"PBO:0041967"}


id: MONDO:0002090
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a eccrine sweat gland.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland neoplasm","termid":"MONDO:0002381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eccrine sweat gland neoplasm","secondary_identifiers":["NCIT:C6796","UMLS:C1333371","DOID:173","MEDGEN:234213"],"synonyms":[{"name":"eccrine neoplasm","type":"exact"},{"name":"eccrine neoplasm of skin","type":"exact"},{"name":"eccrine neoplasm of the skin","type":"exact"},{"name":"eccrine skin neoplasm","type":"exact"},{"name":"eccrine skin tumor","type":"exact"},{"name":"eccrine skin tumour","type":"exact"},{"name":"eccrine sweat gland neoplasm (disease)","type":"exact"},{"name":"eccrine sweat gland tumor","type":"exact"},{"name":"eccrine sweat gland tumour","type":"exact"},{"name":"eccrine tumor","type":"exact"},{"name":"eccrine tumor of skin","type":"exact"},{"name":"eccrine tumor of the skin","type":"exact"},{"name":"eccrine tumour","type":"exact"},{"name":"eccrine tumour of skin","type":"exact"},{"name":"eccrine tumour of the skin","type":"exact"},{"name":"neoplasm of eccrine sweat gland","type":"exact"},{"name":"tumor of eccrine sweat gland","type":"exact"},{"name":"tumour of eccrine sweat gland","type":"exact"}],"termid":"MONDO:0002090","xrefs":{"Monarch":{"xref_id":"0002090"}}}


id: GO:0015442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + (Na+ or H+)(in) = ADP + phosphate + (Na+ or H+)(out).","definition_xrefs":["TC:3.A.2.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-/sodium-translocating ATPase activity (obsolete GO:0015442)","synonyms":[{"name":"hydrogen-/sodium-translocating ATPase activity","type":"exact"},{"name":"proton-/sodium-translocating ATPase activity","type":"exact"}],"termid":"GO:0015442"}


id: GO:0051884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of timing of anagen, the growth phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"regulates","term_name":"anagen","termid":"GO:0042640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of anagen","synonyms":[{"name":"regulation of anagen","type":"related"}],"termid":"GO:0051884"}


id: FYPO:0006868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"decreased protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase of meiosis I","type":"exact"},{"name":"decreased protein localization to cell cortex in zygote","type":"related"},{"name":"reduced protein localization to cell cortex during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006868"}


id: PBO:0048270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT7 divergent transcript","termid":"PBO:0048270"}


id: MONDO:0003613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diffuse peritoneal leiomyomatosis (obsolete MONDO:0003613)","termid":"MONDO:0003613","xrefs":{"Monarch":{"xref_id":"0003613"}}}


id: GO:1901582
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901582)","synonyms":[{"name":"activation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"activation of telomeric RNA transcription from RNA pol II promoter","type":"narrow"},{"name":"positive regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"}],"termid":"GO:1901582"}


id: PBO:0056033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphotoxin beta","termid":"PBO:0056033"}


id: GO:0070929
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A translational elongation process in which transfer of a translating ribosome from one mRNA to another RNA template takes place. Trans-translation occurs during tmRNA release of stalled ribosomes.","definition_xrefs":["GOC:jh2","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"trans-translation","termid":"GO:0070929"}


id: PBO:0048883
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 2","termid":"PBO:0048883"}


id: PBO:0072198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 15","termid":"PBO:0072198"}


id: MONDO:0015159
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id: PBO:0047079
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id: PBO:0044934
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id: PBO:0032752
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id: GO:0070408
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id: GO:1904705
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id: PBO:0054379
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id: PBO:0073499
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id: MONDO:0000272
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id: PBO:0042605
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id: PBO:0063044
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id: MONDO:0000996
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id: PR:Q7LKV3
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id: GO:0120507
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id: FYPO:0004105
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id: GO:0016896
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id: GO:0044024
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id: MONDO:1010072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor X deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor X deficiency, non-human animal","secondary_identifiers":["OMIA:000362"],"termid":"MONDO:1010072","xrefs":{"Monarch":{"xref_id":"1010072"}}}


id: PBO:0025552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase","termid":"PBO:0025552"}


id: MONDO:0017180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 10","termid":"MONDO:0016961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"10q22.3q23.3 microduplication syndrome","secondary_identifiers":["GARD:21052","MEDGEN:1682781","UMLS:C5190512","Orphanet:276422"],"synonyms":[{"name":"dup(10)(q22.3q23.3)","type":"exact"},{"name":"trisomy 10q22.3q23.3","type":"exact"}],"termid":"MONDO:0017180","xrefs":{"Monarch":{"xref_id":"0017180"}}}


id: GO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA transposition.","definition_xrefs":["GOC:dph","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition, DNA-mediated (obsolete GO:0000336)","synonyms":[{"name":"activation of DNA transposition","type":"narrow"},{"name":"positive regulation of DNA transposition","type":"exact"},{"name":"stimulation of DNA transposition","type":"narrow"},{"name":"up regulation of DNA transposition","type":"exact"},{"name":"up-regulation of DNA transposition","type":"exact"},{"name":"upregulation of DNA transposition","type":"exact"}],"termid":"GO:0000336"}


id: PBO:0026679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_dithiothreitol","termid":"PBO:0026679"}


id: GO:1902670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to carbon dioxide.","definition_xrefs":["PMID:15491402","GOC:TermGenie","GO_REF:0000067","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"carbon dioxide binding","synonyms":[{"name":"CO2 binding","type":"exact"}],"termid":"GO:1902670"}


id: MONDO:1012984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parkinson disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, non-human animal","termid":"MONDO:1012984","xrefs":{"Monarch":{"xref_id":"1012984"}}}


id: PBO:0064460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha 1, catalytic subunit","termid":"PBO:0064460"}


id: PBO:0049422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GULP PTB domain containing engulfment adaptor 1","termid":"PBO:0049422"}


id: GO:0099637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor transport","termid":"GO:0099637"}


id: MONDO:0020512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"precursor T-cell acute lymphoblastic leukemia","secondary_identifiers":["Orphanet:99861","GARD:19694","EFO:1001830","icd11.foundation:803161771"],"synonyms":[{"name":"T-ALL","type":"broad"},{"name":"precursor T-cell acute lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukaemia","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukemia","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukemia/lymphoma","type":"exact"}],"termid":"MONDO:0020512","xrefs":{"Monarch":{"xref_id":"0020512"}}}


id: MONDO:0859288
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87661],"is_not":false,"summary":null,"term":"MONDO:0859288"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"is_obsolete":false,"name":"bone marrow failure and diabetes mellitus syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774218","MEDGEN:1823991","OMIM:620044"],"termid":"MONDO:0859288","terms_by_termid":{"MONDO:0859288":null},"xrefs":{"Monarch":{"xref_id":"0859288"}}}


id: FYPO:0008268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphate (Pi) measured in the cell is lower than normal.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphate (Pi) level","termid":"FYPO:0008268"}


id: GO:0089715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing N6-threonylcarbamoyladenosine at position 37 = S-adenosyl-L-homocysteine + tRNA containing N6-methylthreonylcarbamoyladenosine at position 37.","definition_xrefs":["RHEA:70027","PMID:25063302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0140101","GO:0003674","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-7114"],"synonyms":[{"name":"tRNA (L-threonylcarbamoyladenosine(37)-C(2)) methyltransferase activity","type":"exact"},{"name":"tRNA (L-threonylcarbamoyladenosine37-C2-) methyltransferase activity","type":"exact"},{"name":"tRNA m6t6A37 methyltransferase activity","type":"exact"}],"termid":"GO:0089715"}


id: GO:0036499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum membrane stress sensor PERK (PKR-like ER kinase). Begins with activation of PERK in response to endoplasmic reticulum (ER) stress and ends with regulation of a downstream cellular process, e.g. transcription. The main substrate of PERK is the translation initiation factor eIF2alpha. Serine-phosphorylation of eIF2alpha by PERK inactivates eIF2alpha and inhibits general protein translation. In addition, eIF2alpha phosphorylation preferentially increases the translation of selective mRNAs such as ATF4 (activating transcription factor 4), which up regulates a subset of UPR genes required to restore folding capacity.","definition_xrefs":["PMID:27629041","GOC:PARL","GOC:bf","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"},{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"PERK-mediated unfolded protein response","secondary_identifiers":["Reactome:R-HSA-381042"],"synonyms":[{"name":"EIF2AK3-mediated unfolded protein response","type":"related"},{"name":"PERK branch of UPR","type":"exact"},{"name":"PERK signal transduction pathway","type":"broad"},{"name":"PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"PKR-like ER kinase signal transduction","type":"exact"},{"name":"UPR signaling by PERK stress sensor","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"eukaryotic translation initiation factor 2-alpha kinase 3-mediated unfolded protein response","type":"related"}],"termid":"GO:0036499"}


id: GO:0006158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete deoxyadenosine deaminase reaction (obsolete GO:0006158)","synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0006158"}


id: MONDO:0017782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic syndrome characterized by mild to severe global developmental delay, intellectual disability and behavioral abnormalities, hypotonia, strabismus, optic nerve hypoplasia and mild facial dysmorphic features (down slanting palpebral fissures, frontal bossing, crowded teeth, auricular abnormalities and prominent philtral ridges). Other associated clinical features may include seizures and skeletal anomalies (kyphosis/scoliosis, pectus deformities).","definition_xrefs":["Orphanet:313892"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental and speech delay due to SOX5 deficiency","secondary_identifiers":["GARD:17415","MEDGEN:1660895","UMLS:C4749915"],"termid":"MONDO:0017782","xrefs":{"Monarch":{"xref_id":"0017782"}}}


id: GO:0015240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of amiloride from one side of a membrane to the other. Amiloride is a potent and specific inhibitor of sodium ion entry into cells. It is used as a potassium-sparing diuretic.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete amiloride transmembrane transporter activity (obsolete GO:0015240)","synonyms":[{"name":"amiloride transporter activity","type":"related"}],"termid":"GO:0015240"}


id: MONDO:0014781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the TXN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 29","secondary_identifiers":["DOID:0111501","GARD:17863","Orphanet:478029","MEDGEN:1799030","UMLS:C5567607","OMIM:616811"],"synonyms":[{"name":"COXPD29","type":"exact"},{"name":"TXN2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 29","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 29; COXPD29","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in TXN2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 29","type":"exact"}],"termid":"MONDO:0014781","xrefs":{"Monarch":{"xref_id":"0014781"}}}


id: PBO:0076024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 19B (pseudogene)","termid":"PBO:0076024"}


id: MONDO:0008066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal hyperpigmentation, familial transverse","secondary_identifiers":["MEDGEN:331727","UMLS:C1834369","OMIM:161530"],"synonyms":[{"name":"nasal hyperpigmentation, familial transverse","type":"exact"}],"termid":"MONDO:0008066","xrefs":{"Monarch":{"xref_id":"0008066"}}}


id: PATO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The temporal relation between the end of the process with respect to a reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"offset quality","termid":"PATO:0002324"}


id: GO:0030038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of actin filament bundles in which the filaments are loosely packed (approximately 30-60 nm apart) and arranged with opposing polarities; the loose packing allows myosin (usually myosin-II) to enter the bundle.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"contractile actin filament bundle assembly","termid":"GO:0030038"}


id: MONDO:0014838
data:
  {"annotated_genes":["SJAG_03576"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87535],"is_not":false,"summary":null,"term":"MONDO:0014838"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the SMARCE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03576":null},"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112368","UMLS:C4310788","MEDGEN:934755","GARD:16170","OMIM:616938"],"synonyms":[{"name":"COFFIN-SIRIS syndrome 5","type":"related"},{"name":"CSS5","type":"related"},{"name":"Coffin-Siris syndrome 5","type":"exact"},{"name":"Coffin-Siris syndrome caused by mutation in SMARCE1","type":"exact"},{"name":"Coffin-Siris syndrome type 5","type":"exact"},{"name":"SMARCE1 Coffin-Siris syndrome","type":"exact"}],"termid":"MONDO:0014838","terms_by_termid":{"MONDO:0014838":null},"xrefs":{"Monarch":{"xref_id":"0014838"}}}


id: PBO:0061288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 9","termid":"PBO:0061288"}


id: MONDO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"eyelid degenerative disorder","secondary_identifiers":["UMLS:C0155209","DOID:10120","ICD9:374.50","MEDGEN:509851","SCTID:1112003"],"synonyms":[{"name":"eyelid neurodegenerative disease","type":"exact"},{"name":"neurodegenerative disease of eyelid","type":"exact"}],"termid":"MONDO:0000941","xrefs":{"Monarch":{"xref_id":"0000941"}}}


id: PBO:0049314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 2B","termid":"PBO:0049314"}


id: PBO:0055899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 20","termid":"PBO:0055899"}


id: PBO:0045052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 1","termid":"PBO:0045052"}


id: PR:Q9US25
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase hrp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.05","synonyms":[{"name":"ATP-dependent helicase hrp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hrp1","type":"exact"}],"termid":"PR:Q9US25"}


id: PBO:0088742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate phosphatase converting phosphatidate to diacylglycerol, App1","termid":"PBO:0088742"}


id: PBO:0083314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF DAL7/YIR031C","termid":"PBO:0083314"}


id: PR:O94414
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lnp1 gene.","definition_xrefs":["UniProtKB:O94414","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein lunapark (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.07c","synonyms":[{"name":"Spom972h-lnp1","type":"exact"}],"termid":"PR:O94414"}


id: GO:1901333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lateral root development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"regulation of lateral root development","termid":"GO:2000023"},{"relation_name":"positively_regulates","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lateral root development","synonyms":[{"name":"activation of lateral root development","type":"narrow"},{"name":"up regulation of lateral root development","type":"exact"},{"name":"up-regulation of lateral root development","type":"exact"},{"name":"upregulation of lateral root development","type":"exact"}],"termid":"GO:1901333"}


id: GO:0015769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of melibiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Melibiose is the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"melibiose transport","termid":"GO:0015769"}


id: PBO:0055589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3025","termid":"PBO:0055589"}


id: PBO:0070041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1338, pseudogene","termid":"PBO:0070041"}


id: GO:0086089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an atrial cardiomyocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"}],"termid":"GO:0086089"}


id: PBO:0091256
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of cut TWenty","termid":"PBO:0091256"}


id: GO:0042686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"is_a","term_name":"regulation of cardiac cell fate specification","termid":"GO:2000043"},{"relation_name":"regulates","term_name":"cardioblast cell fate specification","termid":"GO:0042685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardioblast cell fate specification","termid":"GO:0042686"}


id: PR:O36027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neural Wiskott-Aldrich syndrome protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.15c","secondary_identifiers":["UniProtKB:O36027"],"synonyms":[{"name":"SPAC4F10.15c","type":"related"},{"name":"Spom972h-WASL","type":"exact"}],"termid":"PR:O36027"}


id: PATO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000825 visual ability value (obsolete PATO:0000825)","termid":"PATO:0000825"}


id: PBO:0056330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 11","termid":"PBO:0056330"}


id: PBO:0088748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-6 family microtubule motor protein Klp9","termid":"PBO:0088748"}


id: PBO:0050099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 9","termid":"PBO:0050099"}


id: MONDO:0016298
data:
  {"annotated_genes":["SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89209,86928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010799"}]},"cv_name":"mondo","definition":"Postlingual non-syndromic genetic deafness is a rare, genetically highly heterogeneous otorhinolaryngologic disease, resulting from inner and/or middle ear or hearing nerve anomalies, typically characterized by progressive, bilateral, moderate to profound hearing loss (mean sensorineural hearing impairment equal to 40 dB or more for 500-, 1,000-, and 2,000-Hz frequency tones in the better ear) which occurs after the onset of speech development and is not associated with visible external ear abnormalities or any other medical problems. Language development is not initially significantly delayed.","definition_xrefs":["Orphanet:216452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"postlingual non-syndromic genetic hearing loss","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1641874","SCTID:764097002","UMLS:C4706678"],"synonyms":[{"name":"isolated postlingual genetic deafness","type":"narrow"},{"name":"postlingual non-syndromic genetic deafness","type":"narrow"}],"termid":"MONDO:0016298","terms_by_termid":{"MONDO:0010799":null},"xrefs":{"Monarch":{"xref_id":"0016298"}}}


id: MONDO:1010529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, pig","secondary_identifiers":["OMIA:000197-9823"],"termid":"MONDO:1010529","xrefs":{"Monarch":{"xref_id":"1010529"}}}


id: GO:0042793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of RNA from a plastid DNA template, usually by a specific plastid RNA polymerase.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"plastid transcription","synonyms":[{"name":"transcription from plastid promoter","type":"exact"}],"termid":"GO:0042793"}


id: FYPO:0003291
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein does not contain galactose residues. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PMID:9125114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0003290","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"galactose absent from glycoprotein glycan","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"alpha 1,2-linked galactose residues absent from glycoprotein","type":"exact"},{"name":"galactose absent from glycoprotein oligosaccharide","type":"related"}],"termid":"FYPO:0003291","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:0007015
data:
  {"annotated_genes":["SJAG_00677","SJAG_02566","SJAG_01388","SJAG_02700","SJAG_04498","SJAG_04172","SJAG_01894","SJAG_04621","SJAG_01943","SJAG_01268","SJAG_01993","SJAG_00521","SJAG_04100","SJAG_02245","SJAG_01384","SJAG_04982","SJAG_03380","SJAG_02864","SJAG_00970","SJAG_01964","SJAG_03086","SJAG_00938","SJAG_02075","SJAG_03088","SJAG_04522","SJAG_04624","SJAG_01732","SJAG_02228","SJAG_04703","SJAG_00279","SJAG_03011","SJAG_03025","SJAG_03455","SJAG_04479"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107529],"is_not":false,"summary":null,"term":"GO:0007015"},{"annotations":[91272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051764"},{"annotations":[101817,92618,105267,90095,99865,101635,100788,107130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090135"},{"annotations":[73351,78207,77916,79147,77458,95772,76836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051017"},{"annotations":[101599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061572"},{"annotations":[118175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061573"},{"annotations":[75262,71999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[73352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051639"},{"annotations":[68045,95773,99671,100789,66217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[91314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045010"},{"annotations":[100234,91274,99976,110109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[80863,78368,80181,79682,81631,104694,76780,81907,99866,109132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[94272,77432,81020,82069],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[118177,110111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[59482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110009"},{"annotations":[79304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"},{"annotations":[76395],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034316"},{"annotations":[109586],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"},{"annotations":[81317,69694,79261,78621,68798],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"},{"relation_name":"part_of","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01388":null,"SJAG_01732":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04172":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04621":null,"SJAG_04624":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin filament organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"actin filament organisation","type":"exact"},{"name":"regulation of actin filament localization","type":"narrow"}],"termid":"GO:0007015","terms_by_termid":{"GO:0007015":null,"GO:0030041":null,"GO:0030042":null,"GO:0030833":null,"GO:0032231":null,"GO:0034314":null,"GO:0034316":null,"GO:0045010":null,"GO:0051016":null,"GO:0051017":null,"GO:0051639":null,"GO:0051764":null,"GO:0061572":null,"GO:0061573":null,"GO:0070649":null,"GO:0071520":null,"GO:0090135":null,"GO:0110009":null,"GO:1903479":null}}


id: PBO:0056954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 18b","termid":"PBO:0056954"}


id: GO:0030537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior in a larval form of an organism, an immature organism that must undergo metamorphosis to assume adult characteristics.","definition_xrefs":["ISBN:0877797099","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval behavior","secondary_identifiers":["GO:0017037"],"synonyms":[{"name":"larval behaviour","type":"exact"}],"termid":"GO:0030537"}


id: PBO:0062463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 154 pseudogene","termid":"PBO:0062463"}


id: FYPO:0006604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic tRNA transcription unit occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"decreased replication fork arrest at tRNA locus","synonyms":[{"name":"decreased replication fork arrest at tRNA genes","type":"exact"},{"name":"decreased replication fork arrest at tRNA locus during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at tRNA locus during vegetative growth","type":"exact"},{"name":"reduced replication fork arrest at tRNA locus","type":"exact"}],"termid":"FYPO:0006604"}


id: PBO:0061741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 4","termid":"PBO:0061741"}


id: MONDO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-X-linked congenital disorder of glycosylation with intellectual disability as a major feature (obsolete MONDO:0018286)","secondary_identifiers":["Orphanet:371064"],"synonyms":[{"name":"non-X-linked CDG with intellectual disability as a major feature","type":"exact"}],"termid":"MONDO:0018286","xrefs":{"Monarch":{"xref_id":"0018286"}}}


id: PBO:0045998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A domain containing","termid":"PBO:0045998"}


id: PBO:0073608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid acetylesterase","termid":"PBO:0073608"}


id: PBO:0064246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 5","termid":"PBO:0064246"}


id: PBO:0055882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC7 antisense RNA 1","termid":"PBO:0055882"}


id: MONDO:0014059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the TENM3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 9","secondary_identifiers":["UMLS:C3554592","GARD:15909","OMIM:615145","MEDGEN:767506"],"synonyms":[{"name":"MCOPCB9","type":"related"},{"name":"TENM3 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 9","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in TENM3","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 9","type":"exact"},{"name":"microphthalmia, syndromic 15","type":"exact"}],"termid":"MONDO:0014059","xrefs":{"Monarch":{"xref_id":"0014059"}}}


id: MONDO:0030983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome","termid":"MONDO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome, IIa 2F","secondary_identifiers":["OMIM:619947","MEDGEN:1809587","UMLS:C5677013"],"synonyms":[{"name":"WS2F","type":"exact"},{"name":"Waardenburg syndrome, IIa 2F","type":"exact"}],"termid":"MONDO:0030983","xrefs":{"Monarch":{"xref_id":"0030983"}}}


id: PBO:0075158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 14","termid":"PBO:0075158"}


id: PBO:0062441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 105 pseudogene","termid":"PBO:0062441"}


id: PBO:0043796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylated homeobox like","termid":"PBO:0043796"}


id: GO:0070814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydrogen sulfide, H2S.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"hydrogen sulfide metabolic process","termid":"GO:0070813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"hydrogen sulfide biosynthetic process","synonyms":[{"name":"hydrogen sulfide anabolism","type":"exact"},{"name":"hydrogen sulfide biosynthesis","type":"exact"},{"name":"hydrogen sulfide formation","type":"exact"},{"name":"hydrogen sulfide synthesis","type":"exact"},{"name":"hydrogen sulphide biosynthesis","type":"exact"},{"name":"hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:0070814"}


id: GO:0102674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 24-methylenelophenol + a demethylated methyl acceptor = 9xi-episterol + a methylated methyl acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete C4-demethylase activity (obsolete GO:0102674)","termid":"GO:0102674"}


id: PBO:0027109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_protein_aggregate_level_during_cellular_response_to_heat","termid":"PBO:0027109"}


id: GO:1902289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["PMID:16040633","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of defense response to oomycetes","termid":"GO:1902288"},{"relation_name":"negatively_regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to oomycetes","synonyms":[{"name":"down regulation of defense response to oomycetes","type":"exact"},{"name":"down-regulation of defense response to oomycetes","type":"exact"},{"name":"downregulation of defense response to oomycetes","type":"exact"},{"name":"inhibition of defense response to oomycetes","type":"narrow"}],"termid":"GO:1902289"}


id: PBO:0120963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF2BP3 pseudogene 2","termid":"PBO:0120963"}


id: GO:0031381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A virus-specific protein complex that possesses RNA-dependent RNA polymerase activity and replicates the genome of an RNA virus.","definition_xrefs":["PMID:15574411","PMID:15613301","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral RNA-directed RNA polymerase complex","termid":"GO:0031381"}


id: GO:0015980
data:
  {"annotated_genes":["SJAG_02158","SJAG_00605","SJAG_04842","SJAG_04963","SJAG_00260","SJAG_03743","SJAG_03920","SJAG_01319","SJAG_00601","SJAG_01376","SJAG_02646","SJAG_00985","SJAG_03290","SJAG_01922","SJAG_04843","SJAG_06382","SJAG_01630","SJAG_02464","SJAG_MIT13","SJAG_MIT03","SJAG_00542","SJAG_07007","SJAG_05006","SJAG_02598","SJAG_00698","SJAG_MIT09","SJAG_02006","SJAG_02433","SJAG_01895","SJAG_01080","SJAG_00027","SJAG_01089","SJAG_01524","SJAG_00839","SJAG_03828","SJAG_01763","SJAG_02105","SJAG_03903","SJAG_00915","SJAG_07006","SJAG_02178","SJAG_06309","SJAG_01402","SJAG_MIT20","SJAG_03370","SJAG_02796","SJAG_01783","SJAG_06621","SJAG_03373","SJAG_MIT04","SJAG_01561","SJAG_02135","SJAG_01414","SJAG_03660","SJAG_01671","SJAG_01490","SJAG_03442","SJAG_00963","SJAG_04122","SJAG_04495","SJAG_02945","SJAG_01077","SJAG_01190","SJAG_02734","SJAG_00132","SJAG_02744","SJAG_00755","SJAG_00080","SJAG_03964","SJAG_02076","SJAG_03114","SJAG_MIT15","SJAG_02592","SJAG_03813","SJAG_03163","SJAG_01753","SJAG_05629","SJAG_02009","SJAG_05204","SJAG_04048","SJAG_02564","SJAG_00115","SJAG_06622","SJAG_04334","SJAG_MIT37","SJAG_02398","SJAG_03925","SJAG_00240","SJAG_04152","SJAG_03588","SJAG_03822","SJAG_01310","SJAG_00570","SJAG_01062","SJAG_02107","SJAG_00976","SJAG_02504","SJAG_00461","SJAG_02369","SJAG_00836","SJAG_03064","SJAG_01539","SJAG_03310","SJAG_00866","SJAG_01355","SJAG_03490","SJAG_04192","SJAG_03851","SJAG_00133","SJAG_07003","SJAG_00438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107418,107417,105593,111375,74323,99942,107787,107788,111378,111380,111379,105336,79726,111374,111377,100213,111376,118347,107419,96474],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061621"},{"annotations":[91049,97736,116509,113779,108645,117850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006112"},{"annotations":[99206,99207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006113"},{"annotations":[105258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[74443,82054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005977"},{"annotations":[116609,90455,100681,116610,100682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[90555],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061613"},{"annotations":[75286,80731,74994,73973,73713,81742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[121103,76141,73729,116226,117458,121051,80762,121073,62712,78336,110262],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006123"},{"annotations":[98668,114852],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[115190,90761,91132,118755],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006121"},{"annotations":[75652,78335,62678,115397,74066,77572,106031,121078,77654,119689],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006122"},{"annotations":[78982,80901],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[98524],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[95818,121090,121096,95227,94801,109783,106978,105631,105605,103775,104991,110766,91076,117844,96797,121084,109875],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"},{"annotations":[80983,75235,76495,100979,74600,89802,89365],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006086"},{"annotations":[96323,111674,99574,113873],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903715"},{"annotations":[63681,72634,67928,65640,73648,75043,75994,77222,77719,76301,81167,108707,62362,72122,78698],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways by which a cell derives energy from organic compounds; results in the oxidation of the compounds from which energy is released.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":111,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00080":null,"SJAG_00115":null,"SJAG_00132":null,"SJAG_00133":null,"SJAG_00240":null,"SJAG_00260":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00570":null,"SJAG_00601":null,"SJAG_00605":null,"SJAG_00698":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00866":null,"SJAG_00915":null,"SJAG_00963":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01062":null,"SJAG_01077":null,"SJAG_01080":null,"SJAG_01089":null,"SJAG_01190":null,"SJAG_01310":null,"SJAG_01319":null,"SJAG_01355":null,"SJAG_01376":null,"SJAG_01402":null,"SJAG_01414":null,"SJAG_01490":null,"SJAG_01524":null,"SJAG_01539":null,"SJAG_01561":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01763":null,"SJAG_01783":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_02006":null,"SJAG_02009":null,"SJAG_02076":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02158":null,"SJAG_02178":null,"SJAG_02369":null,"SJAG_02398":null,"SJAG_02433":null,"SJAG_02464":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02592":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02734":null,"SJAG_02744":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03064":null,"SJAG_03114":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03442":null,"SJAG_03490":null,"SJAG_03588":null,"SJAG_03660":null,"SJAG_03743":null,"SJAG_03813":null,"SJAG_03822":null,"SJAG_03828":null,"SJAG_03851":null,"SJAG_03903":null,"SJAG_03920":null,"SJAG_03925":null,"SJAG_03964":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04842":null,"SJAG_04843":null,"SJAG_04963":null,"SJAG_05006":null,"SJAG_05204":null,"SJAG_05629":null,"SJAG_06309":null,"SJAG_06382":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"energy derivation by oxidation of organic compounds","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"chemoorganotrophy","type":"exact"}],"termid":"GO:0015980","terms_by_termid":{"GO:0005977":null,"GO:0005980":null,"GO:0006086":null,"GO:0006099":null,"GO:0006112":null,"GO:0006113":null,"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0019655":null,"GO:0042776":null,"GO:0045719":null,"GO:0061613":null,"GO:0061621":null,"GO:0061723":null,"GO:1903715":null,"GO:2001172":null}}


id: FYPO:0006680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bisphenol A. Cells stop growing (and may die) at a concentration of bisphenol A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to bisphenol A","synonyms":[{"name":"hypersensitive to bisphenol A","type":"exact"},{"name":"sensitive to BPA","type":"exact"},{"name":"sensitive to bisphenol A during mitotic cell cycle","type":"related"},{"name":"sensitive to bisphenol A during vegetative growth","type":"exact"}],"termid":"FYPO:0006680"}


id: PBO:0050879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 2","termid":"PBO:0050879"}


id: PBO:0002032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh6 (predicted)","termid":"PBO:0002032"}


id: PATO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000055 relative number (obsolete PATO:0000055)","termid":"PATO:0000055"}


id: GO:0033151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["ISBN:0781735149","GOC:add","ISBN:0781700221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"V(D)J recombination","secondary_identifiers":["Wikipedia:V(D)J_recombination"],"synonyms":[{"name":"V(D)J joining","type":"exact"},{"name":"V-D-J joining","type":"exact"},{"name":"V-D-J recombination","type":"exact"},{"name":"V-J joining","type":"exact"},{"name":"V-J recombination","type":"exact"}],"termid":"GO:0033151"}


id: PBO:0067098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 138, pseudogene","termid":"PBO:0067098"}


id: PBO:0070890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 22","termid":"PBO:0070890"}


id: SO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A purine-rich sequence in the group I introns which determines the locations of the splice sites in group I intron splicing and has catalytic activity.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"group_I_intron","termid":"SO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_guide_sequence","synonyms":[{"name":"IGS","type":"exact"},{"name":"internal guide sequence","type":"exact"}],"termid":"SO:0001016"}


id: PBO:0071746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 2","termid":"PBO:0071746"}


id: PBO:0030206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell","termid":"PBO:0030206"}


id: PBO:0052726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 18","termid":"PBO:0052726"}


id: PBO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene name conflict","termid":"PBO:0001338"}


id: FYPO:0001923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein dephosphorylation is normal (i.e. indistinguishable from wild type) during the G2/M phase transition of the mitotic cell cycle. Protein dephosphorylation is the removal of a phosphate group from a protein amino acid.","definition_xrefs":["GO:0006470","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein dephosphorylation during vegetative growth","termid":"FYPO:0001922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein dephosphorylation during mitotic G2/M transition","synonyms":[{"name":"normal protein dephosphorylation during G2/M phase transition","type":"exact"},{"name":"normal protein dephosphorylation during G2/M transition during vegetative growth","type":"exact"},{"name":"normal protein dephosphorylation during G2/M transition of mitotic cell cycle","type":"exact"},{"name":"normal protein/peptide dephosphorylation during mitotic G2/M transition","type":"exact"}],"termid":"FYPO:0001923"}


id: PBO:0072491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 20","termid":"PBO:0072491"}


id: GO:0019400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete alditol metabolic process (obsolete GO:0019400)","synonyms":[{"name":"alditol metabolism","type":"exact"}],"termid":"GO:0019400"}


id: PBO:0054715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2124","termid":"PBO:0054715"}


id: PBO:0061911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AC member 1 pseudogene","termid":"PBO:0061911"}


id: PBO:0017677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase large and small subunit Gsa1","termid":"PBO:0017677"}


id: MONDO:1011329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratoconjunctivitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis, non-human animal","termid":"MONDO:1010330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoconjunctivitis, non-human animal","termid":"MONDO:1011329","xrefs":{"Monarch":{"xref_id":"1011329"}}}


id: MONDO:0003789
data:
  {"annotated_genes":["SJAG_01144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88078],"is_not":false,"summary":null,"term":"MONDO:0003789"}]},"cv_name":"mondo","definition":"A familial carcinoma inherited in an autosomal dominant trait. It is characterized by the development of multiple, bilateral papillary renal cell carcinomas. The carcinomas range from microscopic lesions to clinically symptomatic tumors. It is associated with activating mutations of the MET oncogene.","definition_xrefs":["NCIT:C9222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"papillary renal cell carcinoma","termid":"MONDO:0017884"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01144":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"hereditary papillary renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0879257","SCTID:715561008","MEDGEN:163907","OMIM:605074","DOID:6163","Orphanet:47044","GARD:13157"],"synonyms":[{"name":"familial renal papillary carcinoma","type":"exact"},{"name":"hereditary kidney papillary carcinoma","type":"exact"},{"name":"hereditary papillary carcinoma of kidney","type":"exact"},{"name":"hereditary papillary carcinoma of the kidney","type":"exact"},{"name":"hereditary papillary renal carcinoma","type":"exact"},{"name":"hereditary papillary renal cell cancer","type":"exact"},{"name":"hereditary papillary renal cell carcinoma","type":"exact"},{"name":"renal cell carcinoma, papillary","type":"exact"},{"name":"renal cell carcinoma, papillary, 1, familial and somatic","type":"exact"}],"termid":"MONDO:0003789","terms_by_termid":{"MONDO:0003789":null},"xrefs":{"Monarch":{"xref_id":"0003789"}}}


id: GO:0018194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-alanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-alanine modification","termid":"GO:0018194"}


id: PBO:0113190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysolipid acyltransferase; involved in the synthesis of phosphatidic acid from 1-acyl-2-hydroxy-sn-glycero-3-phosphate using oleoyl-CoA as acyl donor and in phospholipid remodeling, incorporating palmitic acid into the sn-1 position of phosphatidylserine and phosphatidylethanolamine; localizes to ER membranes associated with mitochondria (MAMs); contains three predicted transmembrane domains; similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase","termid":"PBO:0113190"}


id: GO:0035850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an epithelial cell that characterize the cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:yaf","PMID:16216236","GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"}


id: PBO:0084704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial GTP/GDP transporter; essential for mitochondrial genome maintenance; has a role in mitochondrial iron transport; member of the mitochondrial carrier family","termid":"PBO:0084704"}


id: PBO:0064417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylethanolamine N-methyltransferase","termid":"PBO:0064417"}


id: PBO:0087910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA","termid":"PBO:0087910"}


id: GO:0045171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A direct connection between the cytoplasm of two cells that is formed following the completion of cleavage furrow ingression during cell division. They are usually present only briefly prior to completion of cytokinesis. However, in some cases, such as the bridges between germ cells during their development, they become stabilised.","definition_xrefs":["PMID:9635420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intercellular bridge","termid":"GO:0045171"}


id: PBO:0050415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 4","termid":"PBO:0050415"}


id: PATO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000424 occurence value (obsolete PATO:0000424)","termid":"PATO:0000424"}


id: GO:0008396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-oxocholesterol + H+ + NADPH = 7alpha-hydroxycholesterol + NADP+.","definition_xrefs":["RHEA:68740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 7-alpha-hydroxylase activity","termid":"GO:0008387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxysterol 7-alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-192065","Reactome:R-HSA-5602885","Reactome:R-HSA-192178","Reactome:R-HSA-191972"],"synonyms":[{"name":"cytochrome P450 CYP7B1","type":"narrow"}],"termid":"GO:0008396"}


id: PBO:0003218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit e (predicted)","termid":"PBO:0003218"}


id: GO:0070133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translational initiation","termid":"GO:0070132"},{"relation_name":"negatively_regulates","term_name":"mitochondrial translational initiation","termid":"GO:0070124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0140053"],"is_obsolete":false,"name":"negative regulation of mitochondrial translational initiation","synonyms":[{"name":"negative regulation of mitochondrial translation initiation","type":"exact"}],"termid":"GO:0070133"}


id: PBO:0026887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation_with_lagging_chromosomes,_complete_sister_chromatid_separation,_and_decreased_rate_of_mitotic_spindle_elongation","termid":"PBO:0026887"}


id: GO:0031875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 proteinase activated receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 4 proteinase activated receptor binding","synonyms":[{"name":"type 4 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031875"}


id: PR:O36033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tetratricopeptide repeat protein 27 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat-containing protein C19B12.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.01","secondary_identifiers":["UniProtKB:O36033"],"synonyms":[{"name":"Spom972h-TTC27","type":"exact"}],"termid":"PR:O36033"}


id: PBO:0038357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_removed","termid":"PBO:0038357"}


id: MONDO:0019260
data:
  {"annotated_genes":["SJAG_03052","SJAG_02518"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88353,88352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"}]},"cv_name":"mondo","definition":"A genetically heterogeneous group of neuronal ceroid lipofuscinoses (NCLs) with onset during the third decade of life, characterized by dementia, seizures and loss of motor capacities, and sometimes associated with visual loss caused by retinal degeneration.","definition_xrefs":["Orphanet:79262"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02518":null,"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0002525","MONDO:0002039","MONDO:0002561"],"is_obsolete":false,"name":"adult neuronal ceroid lipofuscinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200155","NORD:1341","UMLS:C0022797","NANDO:2201244","GARD:10973","MEDGEN:7230","SCTID:62009002","icd11.foundation:1460031344"],"synonyms":[{"name":"ANCL","type":"exact"},{"name":"CLN4 disease, adult autosomal dominant","type":"related"},{"name":"Kuf's disease","type":"related"},{"name":"Kufs disease","type":"exact"},{"name":"adult NCL","type":"exact"},{"name":"adult neuronal ceroid lipofuscinosis","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 4","type":"related"},{"name":"neuronal ceroid lipofuscinosis of adults","type":"exact"}],"termid":"MONDO:0019260","terms_by_termid":{"MONDO:0008083":null},"xrefs":{"Monarch":{"xref_id":"0019260"}}}


id: PBO:0024804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables_activity_in","termid":"PBO:0024804"}


id: PBO:0055426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2856","termid":"PBO:0055426"}


id: GO:0032657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of interleukin-14 production.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of interleukin-14 production (obsolete GO:0032657)","synonyms":[{"name":"regulation of IL-14 production","type":"exact"},{"name":"regulation of interleukin-14 biosynthetic process","type":"narrow"}],"termid":"GO:0032657"}


id: MONDO:0007883
data:
  {"annotated_genes":["SJAG_03380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88712],"is_not":false,"summary":null,"term":"MONDO:0007883"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03380":null},"genotype_count":0,"is_obsolete":false,"name":"periodic fever, immunodeficiency, and thrombocytopenia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:652522","MEDGEN:78795","OMIM:150550","SCTID:71436005","UMLS:C0272174","MESH:C562721","ICD9:288.09"],"synonyms":[{"name":"lazy leukocyte syndrome","type":"exact"}],"termid":"MONDO:0007883","terms_by_termid":{"MONDO:0007883":null},"xrefs":{"Monarch":{"xref_id":"0007883"}}}


id: PBO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ANC9 family protein","termid":"PBO:0000236"}


id: GO:0047410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + charged-fMet-tRNAs = L-methionylaminoacyl-tRNA + formate.","definition_xrefs":["MetaCyc:3.5.1.27-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete N-formylmethionylaminoacyl-tRNA deformylase activity (obsolete GO:0047410)","synonyms":[{"name":"N-formyl-L-methionylaminoacyl-tRNA amidohydrolase activity","type":"exact"}],"termid":"GO:0047410"}


id: PBO:0088066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; cleaves ubiquitin from ubiquitinated proteins; present in the nucleus and cytoplasm","termid":"PBO:0088066"}


id: internal:is_a
data:
  {"annotation_feature_type":"gene","cv_name":"autocreated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_a","termid":"internal:is_a"}


id: MONDO:0018284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with neurological involvement (obsolete MONDO:0018284)","secondary_identifiers":["Orphanet:371047"],"synonyms":[{"name":"CDG with neurological involvement","type":"exact"}],"termid":"MONDO:0018284","xrefs":{"Monarch":{"xref_id":"0018284"}}}


id: PBO:0079302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 1","termid":"PBO:0079302"}


id: PR:O94606
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- jmj4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.19","synonyms":[{"name":"Spom972h-jmj4","type":"exact"},{"name":"jumonji domain-containing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 149 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94606"}


id: PR:Q9US07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00696","PRO:DNx","PANTHER:PTHR11937:SF13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.02c","secondary_identifiers":["UniProtKB:Q9US07"],"synonyms":[{"name":"Spom972h-ACTR8","type":"exact"}],"termid":"PR:Q9US07"}


id: GO:0047106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-hydroxyphenyl)acetaldehyde + H2O + NAD+ = 4-hydroxyphenylacetate + 2 H+ + NADH.","definition_xrefs":["RHEA:17273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxyphenylacetaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.2.1.53","MetaCyc:1.2.1.53-RXN"],"synonyms":[{"name":"4-HPAL dehydrogenase activity","type":"related"},{"name":"4-hydroxyphenylacetaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047106"}


id: GO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microglial cell activation","termid":"GO:0001774"},{"relation_name":"is_a","term_name":"macrophage activation involved in immune response","termid":"GO:0002281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell activation involved in immune response","synonyms":[{"name":"microglial cell activation during immune response","type":"related"}],"termid":"GO:0002282"}


id: FYPO:0007288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein galactosylation is normal (i.e. indistinguishable from wild type). Protein galactosylation is the addition of a galactose residue to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0042125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein glycosylation during vegetative growth","termid":"FYPO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein galactosylation during vegetative growth","synonyms":[{"name":"normal protein galactosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007288"}


id: SO:0000577
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of chromosome where the spindle fibers attach during mitosis and meiosis.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere","secondary_identifiers":["http://en.wikipedia.org/wiki/Centromere"],"synonyms":[{"name":"INSDC_feature:centromere","type":"exact"}],"termid":"SO:0000577"}


id: GO:0085029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the extracellular matrix.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular matrix assembly","termid":"GO:0085029"}


id: PBO:0079651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 U","termid":"PBO:0079651"}


id: PBO:0080323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 87 pseudogene","termid":"PBO:0080323"}


id: MONDO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete basal ganglia calcification, idiopathic (obsolete MONDO:0000109)","termid":"MONDO:0000109","xrefs":{"Monarch":{"xref_id":"0000109"}}}


id: PBO:0047495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 3","termid":"PBO:0047495"}


id: MONDO:0031047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Stickler syndrome","termid":"MONDO:0019354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005497"],"is_obsolete":false,"name":"Stickler syndrome, type 6","secondary_identifiers":["MEDGEN:1823980","UMLS:C5774207","OMIM:620022"],"synonyms":[{"name":"STL6","type":"exact"},{"name":"Stickler syndrome, type VI","type":"exact"}],"termid":"MONDO:0031047","xrefs":{"Monarch":{"xref_id":"0031047"}}}


id: MONDO:0800304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary sensory and autonomic, type IId","secondary_identifiers":["MEDGEN:860491","UMLS:C4012054"],"synonyms":[{"name":"HSAN2D","type":"exact"}],"termid":"MONDO:0800304","xrefs":{"Monarch":{"xref_id":"0800304"}}}


id: MONDO:0009725
data:
  {"annotated_genes":["SJAG_03379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88647],"is_not":false,"summary":null,"term":"MONDO:0009725"}]},"cv_name":"mondo","definition":"An autosomal recessive inherited myopathy caused by mutations in the NEB gene. It is characterized by generalized hypotonia and skeletal muscle weakness.","definition_xrefs":["NCIT:C118784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"intermediate nemaline myopathy","termid":"MONDO:0015736"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"},{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:342534","UMLS:C1850569","OMIM:256030","DOID:0110928","GARD:15209","MESH:C538349"],"synonyms":[{"name":"NEB nemaline myopathy","type":"exact"},{"name":"NEM2","type":"exact"},{"name":"nemaline myopathy 2","type":"exact"},{"name":"nemaline myopathy 2, autosomal recessive","type":"exact"},{"name":"nemaline myopathy caused by mutation in NEB","type":"exact"},{"name":"nemaline myopathy type 2","type":"exact"}],"termid":"MONDO:0009725","terms_by_termid":{"MONDO:0009725":null},"xrefs":{"Monarch":{"xref_id":"0009725"}}}


id: PBO:0057006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mir-99a-let-7c cluster host gene","termid":"PBO:0057006"}


id: PBO:0077009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombomodulin","termid":"PBO:0077009"}


id: PBO:0016112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus3 (predicted)","termid":"PBO:0016112"}


id: GO:1904498
data:
  {"annotated_genes":["SJAG_00279","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94274,120662],"is_not":false,"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"Any protein localization to actomyosin contractile ring that is involved in mitotic cytokinesis.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:25688133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to actomyosin contractile ring","termid":"GO:1990179"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0051179","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"protein localization to mitotic actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localisation to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"protein localization to actomyosin contractile ring during mitotic cytokinesis","type":"related"},{"name":"protein localization to actomyosin contractile ring involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1904498","terms_by_termid":{"GO:1904498":null}}


id: PBO:0069606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 883, pseudogene","termid":"PBO:0069606"}


id: MONDO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vascular diseases characterized by thickening and hardening of the walls of arteries inside the skull. There are three subtypes: (1) atherosclerosis with fatty deposits in the arterial intima; (2) Monckeberg's sclerosis with calcium deposits in the media and (3) arteriolosclerosis involving the small caliber arteries. Clinical signs include headache; confusion; transient blindness (amaurosis fugax); speech impairment; and hemiparesis.","definition_xrefs":["MESH:D002537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriosclerosis disorder","termid":"MONDO:0002277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial arteriosclerosis","secondary_identifiers":["UMLS:C0007771","DOID:13097","MEDGEN:3319"],"termid":"MONDO:0001632","xrefs":{"Monarch":{"xref_id":"0001632"}}}


id: GO:0008855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield 5'-phosphomononucleotides.","definition_xrefs":["EC:3.1.11.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016788","GO:0004527","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"exodeoxyribonuclease VII activity","secondary_identifiers":["MetaCyc:3.1.11.6-RXN"],"synonyms":[{"name":"E. coli exonuclease VII","type":"related"},{"name":"E. coli exonuclease VII activity","type":"narrow"},{"name":"Escherichia coli exonuclease VII","type":"related"},{"name":"endodeoxyribonuclease VII","type":"related"},{"name":"exonuclease VII activity","type":"related"}],"termid":"GO:0008855"}


id: FYPO:0005460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin at promoter","termid":"FYPO:0006349"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at protein coding gene","termid":"FYPO:0008249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to chromatin at MCB promoters","synonyms":[{"name":"abolished protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at MCB target genes","type":"related"},{"name":"abolished protein localization to chromatin at MCB-containing promoters","type":"exact"},{"name":"protein localization to chromatin at MCB promoters during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005460"}


id: PBO:0089373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc10","termid":"PBO:0089373"}


id: GO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl-R = CMP + alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl-R.","definition_xrefs":["EC:2.4.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"beta-galactoside (CMP) alpha-2,3-sialyltransferase activity","secondary_identifiers":["RHEA:21616","Reactome:R-HSA-9605600","Reactome:R-HSA-1912378","MetaCyc:2.4.99.4-RXN","Reactome:R-HSA-1022129","Reactome:R-HSA-3656258","Reactome:R-HSA-2046285","Reactome:R-HSA-9844860","Reactome:R-HSA-4084984","Reactome:R-HSA-9603987","Reactome:R-HSA-9845538"],"termid":"GO:0003836"}


id: MONDO:0014938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated aniridia in which the cause of the disease is a mutation in the TRIM44 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye carcinoma","termid":"MONDO:0002466"},{"relation_name":"is_a","term_name":"iris cancer","termid":"MONDO:0002658"},{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"isolated aniridia","termid":"MONDO:0007119"},{"relation_name":"is_a","term_name":"SMARCB1-deficient kidney medullary carcinoma","termid":"MONDO:0100534"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328","MONDO:0005240"],"is_obsolete":false,"name":"aniridia 3","secondary_identifiers":["GARD:16201","MEDGEN:934662","OMIM:617142","UMLS:C4310695"],"synonyms":[{"name":"AN3","type":"exact"},{"name":"TRIM44 isolated aniridia","type":"exact"},{"name":"aniridia 3","type":"exact"},{"name":"aniridia 3; AN3","type":"exact"},{"name":"aniridia type 3","type":"exact"},{"name":"isolated aniridia caused by mutation in TRIM44","type":"exact"}],"termid":"MONDO:0014938","xrefs":{"Monarch":{"xref_id":"0014938"}}}


id: GO:0071797
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex that catalyzes linear head-to-tail polyubiquitin conjugation on its targets. In human the complex consists of RBCK1, RNF31 and SHARPIN, and has an MW of approximately 600 kDa, suggesting a heteromultimeric assembly of its subunits. LUBAC stands for Linear Ubiquitin Chain Assembly Complex.","definition_xrefs":["PMID:19136968","PMID:21455180","PMID:17006537","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"LUBAC complex","termid":"GO:0071797"}


id: MONDO:0011026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive congenital ichthyosis in which the cause of the disease is a mutation in the ABCA12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"},{"relation_name":"is_a","term_name":"lamellar ichthyosis","termid":"MONDO:0017778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 4A","secondary_identifiers":["DOID:0060712","MEDGEN:371355","GARD:9733","OMIM:601277","MESH:C537264","UMLS:C1832550"],"synonyms":[{"name":"ARCI4A","type":"exact"},{"name":"ICR2B","type":"exact"},{"name":"LI2","type":"related"},{"name":"autosomal recessive congenital ichthyosis type 4A","type":"exact"},{"name":"ichthyosis congenita 2B","type":"related"},{"name":"ichthyosis congenita IIB","type":"exact"},{"name":"ichthyosis lamellar 2","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 4A","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 4A","type":"exact"},{"name":"ichthyosis, lamellar, 2","type":"related"},{"name":"ichthyosis, lamellar, 2, formerly","type":"related"},{"name":"lamellar ichthyosis 2","type":"exact"},{"name":"lamellar ichthyosis, type 2","type":"related"}],"termid":"MONDO:0011026","xrefs":{"Monarch":{"xref_id":"0011026"}}}


id: FYPO:0007289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UDP-glucose 4-epimerase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal UDP-glucose 4-epimerase activity","termid":"FYPO:0007289"}


id: GO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of galactose that leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by galactose","termid":"GO:0000409"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"carbon catabolite repression of transcription by galactose","synonyms":[{"name":"down regulation of transcription by galactose","type":"exact"},{"name":"down-regulation of transcription by galactose","type":"exact"},{"name":"downregulation of transcription by galactose","type":"exact"},{"name":"inhibition of transcription by galactose","type":"narrow"}],"termid":"GO:0000410"}


id: MONDO:1010124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune lymphoproliferative syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome, non-human animal","secondary_identifiers":["OMIA:002064"],"termid":"MONDO:1010124","xrefs":{"Monarch":{"xref_id":"1010124"}}}


id: SO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Arrangement of the polypeptide with respect to the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"membrane_structure","secondary_identifiers":["BS:00128"],"synonyms":[{"name":"membrane structure","type":"exact"}],"termid":"SO:0001071"}


id: PBO:0038990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADRM1 26S proteasome ubiquitin receptor","termid":"PBO:0038990"}


id: PBO:0030505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_GW_7647","termid":"PBO:0030505"}


id: MONDO:0100556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of rare movement and seizure disorders caused by changes (disease-causing variants or mutations) in the PRRT2 gene. They include a spectrum of specific disorders including paroxysmal kinesigenic dyskinesia (PKD), benign familial infantile epilepsy (BFIE), paroxysmal kinesigenic dyskinesia with infantile convulsions (PKD/IC) and hemiplegic migraine (HM). In addition, PRRT2 pathogenic variants have been identified in other childhood-onset movement disorders and different types of seizure conditions, such as paroxysmal torticollis, episodic ataxia and familial paroxysmal non-kinesigenic dyskinesia. It’s important to note that these disorders can also have different genetic causes.","definition_xrefs":["PMID:32916768","PMID:33746883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRRT2-associated paroxysmal movement disorder","termid":"MONDO:0100556","xrefs":{"Monarch":{"xref_id":"0100556"}}}


id: GO:0032266
data:
  {"annotated_genes":["SJAG_02248","SJAG_02852","SJAG_04024","SJAG_04963","SJAG_00314","SJAG_01519","SJAG_04010","SJAG_02587","SJAG_03250","SJAG_01783","SJAG_01382","SJAG_00173","SJAG_00115","SJAG_01135","SJAG_00971","SJAG_00638","SJAG_04219","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69059,72390,73712,74992,75285,76486,80191,81741,82188,92525,93454,97883,101656,101794,101795,106795,111621,111978],"is_not":false,"summary":null,"term":"GO:0032266"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-3-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3' position.","definition_xrefs":["GOC:bf","PMID:11557775","PMID:10209156","PMID:11395417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00173":null,"SJAG_00314":null,"SJAG_00638":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_01519":null,"SJAG_01783":null,"SJAG_02248":null,"SJAG_02587":null,"SJAG_02852":null,"SJAG_03250":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04219":null,"SJAG_04963":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PtdIns-3-P binding","type":"exact"},{"name":"phosphatidylinositol 3-phosphate binding","type":"exact"}],"termid":"GO:0032266","terms_by_termid":{"GO:0032266":null}}


id: GO:0097668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Saf1 in S. cerevisiae (Pof9 in S. pombe).","definition_xrefs":["GOC:jd","PMID:11283612","PMID:15147268","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Saf1/Pof9 ubiquitin ligase complex","termid":"GO:0097668"}


id: MONDO:0021472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the scrotum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign male reproductive system neoplasm","termid":"MONDO:0000625"},{"relation_name":"is_a","term_name":"scrotum neoplasm","termid":"MONDO:0003319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of scrotum","secondary_identifiers":["MEDGEN:102302","SCTID:92336000","UMLS:C0154011","ICD10CM:D29.4","NCIT:C3615","ICD9:222.4","icd11.foundation:640770928"],"synonyms":[{"name":"benign neoplasm of the scrotum","type":"exact"},{"name":"benign scrotal neoplasm","type":"exact"},{"name":"benign scrotal tumor","type":"exact"},{"name":"benign scrotal tumour","type":"exact"},{"name":"benign tumor of scrotum","type":"exact"},{"name":"benign tumor of the scrotum","type":"exact"},{"name":"benign tumour of scrotum","type":"exact"},{"name":"benign tumour of the scrotum","type":"exact"},{"name":"scrotum benign neoplasm","type":"exact"}],"termid":"MONDO:0021472","xrefs":{"Monarch":{"xref_id":"0021472"}}}


id: PBO:0004376
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.39","termid":"PBO:0004376"}


id: GO:0048766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a protrusion or bulge is formed at the site of plant root hair outgrowth.","definition_xrefs":["GOC:jid","PMID:12468740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"root hair cell differentiation","termid":"GO:0048765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair initiation","termid":"GO:0048766"}


id: GO:0043332
data:
  {"annotated_genes":["SJAG_04982","SJAG_02169","SJAG_01017","SJAG_02700","SJAG_01215","SJAG_03011","SJAG_01888","SJAG_05001","SJAG_04887","SJAG_02222","SJAG_00185","SJAG_01993","SJAG_03453","SJAG_03596","SJAG_04509","SJAG_00938","SJAG_03145","SJAG_01794","SJAG_02228","SJAG_01732","SJAG_04001","SJAG_03357","SJAG_00667","SJAG_05285","SJAG_03646","SJAG_02718","SJAG_01943","SJAG_00700","SJAG_02351","SJAG_04703","SJAG_00279","SJAG_00514","SJAG_04100","SJAG_04781","SJAG_01171","SJAG_02486","SJAG_02924","SJAG_03444","SJAG_04723","SJAG_00870","SJAG_04901","SJAG_00677"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72035,74071,75840,77456,78205,79672,80589,89831,92615,92661,94530,98811,99668,99862,100845,105204,108067,108828,109129,110824,111035,116317,117811],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[92786,95770,101501,97316,113306,95964,110041,103899,102107,110102,118170,103898,90220,91038,94457,116616,121543],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[98324,112178],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"}]},"cv_name":"cellular_component","definition":"The apex of the mating projection in unicellular fungi exposed to mating pheromone; site of polarized growth.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00279":null,"SJAG_00514":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_03011":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03646":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04509":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection tip","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:36148799":null},"synonyms":[{"name":"conjugation tube tip","type":"narrow"},{"name":"shmoo tip","type":"narrow"}],"termid":"GO:0043332","terms_by_termid":{"GO:0043332":null,"GO:0070867":null,"GO:1990819":null}}


id: PBO:0069395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 655, pseudogene","termid":"PBO:0069395"}


id: GO:0046160
data:
  {"annotated_genes":["SJAG_04397","SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80272,81919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme a, a derivative of heme found in cytochrome aa3.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03173":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme a metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"haem a metabolic process","type":"exact"},{"name":"haem a metabolism","type":"exact"},{"name":"heme a metabolism","type":"exact"}],"termid":"GO:0046160","terms_by_termid":{"GO:0006784":null}}


id: MONDO:0015663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diencephalic syndrome (DS) is a rare condition characterized by profound emaciation and failure to thrive (with normal caloric intake and normal linear growth), hyperalertness, hyperkinesias and euphoria, in the presence of hypothalamic tumors.","definition_xrefs":["Orphanet:1672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diencephalic syndrome","secondary_identifiers":["GARD:6276","MEDGEN:90981","ICD9:253.8","NORD:1052","SCTID:237733001","NCIT:C116955","UMLS:C0342436","icd11.foundation:879659089"],"synonyms":[{"name":"Russell diencephalic cachexia","type":"exact"},{"name":"Russell syndrome","type":"exact"},{"name":"diencephalic cachexia","type":"exact"},{"name":"diencephalic syndrome of childhood","type":"exact"},{"name":"diencephalic syndrome of emaciation","type":"exact"},{"name":"diencephalic syndrome of infancy","type":"exact"}],"termid":"MONDO:0015663","xrefs":{"Monarch":{"xref_id":"0015663"}}}


id: PBO:0026904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body","termid":"PBO:0026904"}


id: PBO:0057475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 593","termid":"PBO:0057475"}


id: PR:Q9P7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gad8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom972h-gad8","type":"exact"}],"termid":"PR:Q9P7J8"}


id: PBO:0075840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 1","termid":"PBO:0075840"}


id: MONDO:0003243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of hepatocellular carcinoma characterized by the presence of clear cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatocellular clear cell carcinoma","secondary_identifiers":["ICDO:8174/3","NCIT:C5754","UMLS:C1266020","MEDGEN:690059","DOID:5016"],"synonyms":[{"name":"clear cell carcinoma of liver cells","type":"exact"},{"name":"clear cell carcinoma of the liver cells","type":"exact"},{"name":"clear cell hepatocellular cancer","type":"exact"},{"name":"clear cell hepatocellular carcinoma","type":"exact"},{"name":"hepatocellular clear cell carcinoma","type":"exact"},{"name":"liver cell clear cell carcinoma","type":"exact"}],"termid":"MONDO:0003243","xrefs":{"Monarch":{"xref_id":"0003243"}}}


id: GO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac chamber from unspecified parts. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber formation","synonyms":[{"name":"heart chamber formation","type":"exact"}],"termid":"GO:0003207"}


id: MONDO:0005002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic and progressive lung disorder characterized by the loss of elasticity of the bronchial tree and the air sacs, destruction of the air sacs wall, thickening of the bronchial wall, and mucous accumulation in the bronchial tree. The pathologic changes result in the disruption of the air flow in the bronchial airways. Signs and symptoms include shortness of breath, wheezing, productive cough, and chest tightness. The two main types of chronic obstructive pulmonary disease are chronic obstructive bronchitis and emphysema.","definition_xrefs":["NCIT:C3199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"obstructive lung disease","termid":"MONDO:0002267"},{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic obstructive pulmonary disease","secondary_identifiers":["SCTID:13645005","UMLS:C0024117","MESH:D029424","ICD9:490-496","OMIM:606963","MEDGEN:9818","DOID:3083","EFO:0000341","ICD9:496","icd11.foundation:133207228"],"synonyms":[{"name":"COLD","type":"exact"},{"name":"COPD","type":"exact"},{"name":"COPD, chronic obstructive pulmonary disease","type":"exact"},{"name":"chronic obstructive airway disease","type":"exact"},{"name":"chronic obstructive airways disease","type":"exact"},{"name":"chronic obstructive lung disease","type":"exact"},{"name":"chronic obstructive pulmonary disease (COPD)","type":"exact"},{"name":"chronic obstructive pulmonary disease, (COPD)","type":"exact"},{"name":"cold","type":"exact"},{"name":"cold (chronic obstructive lung disease)","type":"exact"},{"name":"disease (COPD), chronic obstructive","type":"exact"},{"name":"obstructive lung disease, chronic","type":"exact"},{"name":"obstructive pulmonary disease (COPD), chronic","type":"exact"},{"name":"pulmonary disease (COPD), chronic obstructive","type":"exact"}],"termid":"MONDO:0005002","xrefs":{"Monarch":{"xref_id":"0005002"}}}


id: GO:0051978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of lysophospholipids from one side of a membrane to the other. A lysophospholipid is a phospholipid that lacks one of its fatty acyl chains; it is an intermediate formed during digestion of dietary and biliary phospholipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"lysophospholipid:sodium symporter activity","synonyms":[{"name":"lysophospholipid transporter activity","type":"broad"}],"termid":"GO:0051978"}


id: PBO:0117170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRM1 antisense RNA 1","termid":"PBO:0117170"}


id: GO:0016255
data:
  {"annotated_genes":["SJAG_03672","SJAG_02776","SJAG_00846","SJAG_03292","SJAG_05278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72465,72705,76438,76440,77241],"is_not":false,"summary":null,"term":"GO:0016255"}]},"cv_name":"biological_process","definition":"A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"},{"relation_name":"part_of","term_name":"GPI anchored protein biosynthesis","termid":"GO:0180046"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_02776":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_05278":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"attachment of GPI anchor to protein","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-162791"],"termid":"GO:0016255","terms_by_termid":{"GO:0016255":null}}


id: PBO:0064587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member G","termid":"PBO:0064587"}


id: GO:0032679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of TRAIL production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"TRAIL production","termid":"GO:0032639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of TRAIL production","secondary_identifiers":["GO:0045554"],"synonyms":[{"name":"regulation of TRAIL biosynthetic process","type":"narrow"}],"termid":"GO:0032679"}


id: GO:0000463
data:
  {"annotated_genes":["SJAG_04108","SJAG_00752","SJAG_03425","SJAG_00749","SJAG_00722","SJAG_04289","SJAG_00882","SJAG_02374","SJAG_01821","SJAG_03789","SJAG_05190","SJAG_05223","SJAG_01606","SJAG_02275","SJAG_04492","SJAG_02830","SJAG_01581","SJAG_01366","SJAG_02894","SJAG_01551","SJAG_04669","SJAG_02427"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62653,72260,73128,74185,74211,75231,75395,75575,75943,76733,77135,77804,80091,80609,81629,99894,99927,102007],"is_not":false,"summary":null,"term":"GO:0000463"},{"annotations":[73419,96911,106069,93648],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_01366":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01821":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02427":null,"SJAG_02830":null,"SJAG_02894":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_04108":null,"SJAG_04289":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_05190":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000463","terms_by_termid":{"GO:0000448":null,"GO:0000463":null}}


id: PBO:0003195
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.5","termid":"PBO:0003195"}


id: MONDO:0011736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cree intellectual disability syndrome","secondary_identifiers":["MESH:C564654","UMLS:C1847361","OMIM:606851","MEDGEN:335673"],"synonyms":[{"name":"Cree intellectual disability syndrome","type":"exact"},{"name":"Cree mental retardation syndrome","type":"exact"}],"termid":"MONDO:0011736","xrefs":{"Monarch":{"xref_id":"0011736"}}}


id: MONDO:0008834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma, nasal polyps, and aspirin intolerance","secondary_identifiers":["MEDGEN:347198","DOID:0111579","OMIM:208550","UMLS:C1859648"],"synonyms":[{"name":"Asa triad","type":"related"},{"name":"asthma and nasal polyps","type":"related"},{"name":"asthma, aspirin-induced, susceptibility to","type":"related"},{"name":"asthma, nasal polyps, and aspirin intolerance","type":"exact"}],"termid":"MONDO:0008834","xrefs":{"Monarch":{"xref_id":"0008834"}}}


id: MONDO:0020476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesial temporal lobe epilepsy with hippocampal sclerosis is a rare epilepsy syndrome defined by seizures originating in limbic areas of the mesial temporal lobe, particularly in the hippocampus, amygdala, and in the parahippocampal gyrus and its connections, and hippocampal sclerosis, usually unilateral or asymmetric. It is frequently associated with an initial precipitating event, such as febrile seizures, hypoxia, intracranial infection or head trauma, most often occurring in the first five years of life, followed by a latent period without seizures. Typical seizures consist of a characteristic aura that is frequently a rising epigastric sensation associated with emotional disturbances, illusions, and autonomic symptoms (widened pupils, palpitations), progressive impairment of consciousness, oro-alimentary automatisms (lip smacking, chewing, licking, tooth grinding), behavioral arrest, head deviation, dystonic postures, hand and verbal automatisms. Seizures are followed by postictal dysfunction. Initially, seizures are easily controlled with antiepileptic drugs, later they frequently become refractory and associated with progressive behavioral changes and memory deficits.","definition_xrefs":["Orphanet:99701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"mesial temporal lobe epilepsy with hippocampal sclerosis","secondary_identifiers":["GARD:19684","UMLS:C4749367","NANDO:1200588","MEDGEN:1659013"],"synonyms":[{"name":"MTLE-HS","type":"exact"}],"termid":"MONDO:0020476","xrefs":{"Monarch":{"xref_id":"0020476"}}}


id: GO:0015621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric triacetylfusarinine C from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ferric triacetylfusarinine C transmembrane transporter activity","termid":"GO:0015621"}


id: GO:1901588
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any microtubule in a dendrite, a neuron projection.","definition_xrefs":["NIF_Subcellular:sao110773650","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"dendritic microtubule","synonyms":[{"name":"microtubule of dendrite","type":"exact"},{"name":"microtubulus of dendrite","type":"exact"}],"termid":"GO:1901588"}


id: GO:0098725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell division in which both daughter cells are of the same type.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symmetric cell division","termid":"GO:0098725"}


id: MONDO:0011679
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[87000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"}]},"cv_name":"mondo","definition":"Autosomal recessive form of craniosynostosis.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis syndrome, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564700","MEDGEN:338335","OMIM:606529","UMLS:C1847865"],"synonyms":[{"name":"autosomal recessive craniosynostosis","type":"exact"},{"name":"craniosynostosis syndrome, autosomal recessive","type":"exact"},{"name":"craniosynostosis, autosomal recessive","type":"exact"}],"termid":"MONDO:0011679","terms_by_termid":{"MONDO:0008726":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0011679"}}}


id: GO:0098820
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that spans the synaptic cleft and has parts in both the pre- and post-synaptic membranes.","definition_xrefs":["PMID:20200227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"trans-synaptic protein complex","termid":"GO:0098820"}


id: PBO:0047557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 2","termid":"PBO:0047557"}


id: PBO:0119632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 10","termid":"PBO:0119632"}


id: MONDO:0020134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"cystic malformation of the posterior fossa","secondary_identifiers":["ICD9:742.4","Orphanet:98520","MEDGEN:783289","UMLS:C3662134","SCTID:35111000119109"],"termid":"MONDO:0020134","xrefs":{"Monarch":{"xref_id":"0020134"}}}


id: PBO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Rrp8 (predicted)","termid":"PBO:0000795"}


id: PBO:0058925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7d","termid":"PBO:0058925"}


id: GO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of S-(peptidyl-glycyl)-peptidyl-cysteine cross-links by the formation of a thiolester between cysteine and the carboxy-terminal glycine of ubiquitin and other proteins.","definition_xrefs":["GOC:jh2","RESID:AA0206"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-glycyl-L-cysteine (obsolete GO:0018255)","termid":"GO:0018255"}


id: PBO:0057566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 761","termid":"PBO:0057566"}


id: PBO:0113056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glucose deprivation induced stress granules; involved in P-body-dependent granule assembly; regulates TORC1 signaling and autophagy; interacts with Pab1p to regulate mRNA polyadenylation; interacts with Mkt1p to regulate HO translation; regulates expression of genes involved in gluconeogenesis and mitochondrial function through multiple mechanisms","termid":"PBO:0113056"}


id: PBO:0090126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator","termid":"PBO:0090126"}


id: GO:0097499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a non-motile cilium.","definition_xrefs":["PMID:23128241","GOC:cilia","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to non-motile cilium","synonyms":[{"name":"protein localization to nonmotile primary cilium","type":"related"}],"termid":"GO:0097499"}


id: PBO:0041262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q B chain","termid":"PBO:0041262"}


id: MONDO:0011334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Limb-mammary syndrome (LMS) is a rare disease belonging to the group of ectodermal dysplasias.","definition_xrefs":["Orphanet:69085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"limb-mammary syndrome","secondary_identifiers":["UMLS:C1863753","icd11.foundation:1958986288","MEDGEN:355051","GARD:10051","SCTID:721972001","MESH:C535903","OMIM:603543"],"synonyms":[{"name":"LMS","type":"exact"},{"name":"limb-mammary syndrome","type":"exact"},{"name":"mammary hypoplasia, ectrodactyly, and other hand/foot anomalies","type":"related"}],"termid":"MONDO:0011334","xrefs":{"Monarch":{"xref_id":"0011334"}}}


id: PBO:0084466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase-responsive inhibitor of the Ste12p transcription factor; involved in the regulation of mating-specific genes and the invasive growth pathway; related regulators Dig1p and Dig2p bind to Ste12p; DIG2 has a paralog, DIG1, that arose from the whole genome duplication","termid":"PBO:0084466"}


id: GO:0052199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052199)","synonyms":[{"name":"down regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of enzyme activity in other organism","type":"exact"},{"name":"inhibition of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of enzyme activity in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052199"}


id: PBO:0058031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4252","termid":"PBO:0058031"}


id: PBO:0057324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519d","termid":"PBO:0057324"}


id: GO:0010663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle cell apoptotic process","termid":"GO:0010661"},{"relation_name":"is_a","term_name":"regulation of striated muscle cell apoptotic process","termid":"GO:0010662"},{"relation_name":"positively_regulates","term_name":"striated muscle cell apoptotic process","termid":"GO:0010658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of striated muscle cell apoptotic process","synonyms":[{"name":"positive regulation of striated muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010663"}


id: MONDO:0004170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nodular episcleritis","secondary_identifiers":["icd11.foundation:134477595","MEDGEN:509927","SCTID:70558001","DOID:728","ICD10CM:H15.12","ICD9:379.02","UMLS:C0155352"],"termid":"MONDO:0004170","xrefs":{"Monarch":{"xref_id":"0004170"}}}


