# terms

id: MONDO:1011043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glomerulonephritis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis, non-human animal","termid":"MONDO:1010258"},{"relation_name":"is_a","term_name":"nephritis, dog","termid":"MONDO:1011045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomerulonephritis, dog","secondary_identifiers":["OMIA:000413-9615"],"termid":"MONDO:1011043","xrefs":{"Monarch":{"xref_id":"1011043"}}}


id: MONDO:0006287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor that arises from the bone. It is characterized by the presence of an area of high grade sarcoma in an otherwise typical giant cell tumor (primary malignancy in giant cell tumor), or the presence of sarcoma in which the pre-existing giant cell tumor may or may not be apparent (secondary malignancy in giant cell tumor).","definition_xrefs":["NCIT:C4304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant giant cell tumor","termid":"MONDO:0002402"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignancy in giant cell tumor of bone","secondary_identifiers":["DOID:4719","ICDO:9250/3","NANDO:2200052","EFO:1000347","MEDGEN:87263","UMLS:C0334552"],"synonyms":[{"name":"Dedifferentiated giant cell tumor","type":"exact"},{"name":"Dedifferentiated giant cell tumour","type":"exact"},{"name":"OSTEOCLASTOMA, malignant","type":"exact"},{"name":"bone giant cell sarcoma","type":"exact"},{"name":"giant cell bone sarcoma","type":"exact"},{"name":"giant cell sarcoma of bone","type":"exact"},{"name":"giant cell sarcoma of the bone","type":"exact"},{"name":"giant cell tumor of bone, malignant","type":"exact"},{"name":"giant cell tumor of bone, malignant (morphologic abnormality)","type":"exact"},{"name":"giant cell tumour of bone, malignant","type":"exact"},{"name":"giant cell tumour of bone, malignant (morphologic abnormality)","type":"exact"},{"name":"malignancy in giant cell tumor of bone","type":"exact"},{"name":"malignancy in giant cell tumor of the bone","type":"exact"},{"name":"malignancy in giant cell tumour of the bone","type":"exact"},{"name":"malignant giant cell tumor of bone","type":"exact"},{"name":"malignant giant cell tumour of bone","type":"exact"}],"termid":"MONDO:0006287","xrefs":{"Monarch":{"xref_id":"0006287"}}}


id: GO:0004261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity similar to chymotrypsin C.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin G activity (obsolete GO:0004261)","synonyms":[{"name":"cathepsin G activity","type":"exact"},{"name":"chymotrypsin-like proteinase activity","type":"related"},{"name":"neutral proteinase activity","type":"related"}],"termid":"GO:0004261"}


id: PBO:0089153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit Vps16","termid":"PBO:0089153"}


id: PBO:0083528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SFL1/YOR140W","termid":"PBO:0083528"}


id: PBO:0065906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabaptin, RAB GTPase binding effector protein 2","termid":"PBO:0065906"}


id: GO:1902863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryonic camera-type eye development.","definition_xrefs":["GOC:TermGenie","PMID:16872597","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"embryonic camera-type eye development","termid":"GO:0031076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic camera-type eye development","synonyms":[{"name":"regulation of embryonic eye development","type":"exact"}],"termid":"GO:1902863"}


id: PR:O14360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex non-core subunit NAF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03547","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex non-core subunit NAF1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.15","secondary_identifiers":["UniProtKB:O14360"],"synonyms":[{"name":"Spom972h-NAF1","type":"exact"},{"name":"nuclear assembly factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14360"}


id: PBO:0036015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_glutamate","termid":"PBO:0036015"}


id: GO:0005799
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coatomer (obsolete GO:0005799)","synonyms":[{"name":"COPI vesicle","type":"related"},{"name":"coatomer","type":"exact"}],"termid":"GO:0005799"}


id: PBO:0040996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 1","termid":"PBO:0040996"}


id: MONDO:0012853
data:
  {"annotated_genes":["SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89200],"is_not":false,"summary":null,"term":"MONDO:0012853"}]},"cv_name":"mondo","definition":"A rare premature aging syndrome characterized by pre-and postnatal growth retardation, a congenital premature-aged appearance with distinctive craniofacial dysmorphism (wide calvaria with large open anterior fontanel and wide metopic suture, broad forehead, small face, micrognathia), markedly diminished subcutaneous fat, cutis laxa and wrinkled skin, without delay in psychomotor development. Scant, brittle hair, hypoplastic nails and delayed, abnormal dentition, as well as hypoplastic distal phalanges, umbilical hernia and eye abnormalities (myopia/hyperopia, strabismus), are also commonly associated.","definition_xrefs":["Orphanet:2963"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00612":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Fontaine progeroid syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537290","ICD9:759.89","GARD:4497","SCTID:205800003","UMLS:C2676780","MEDGEN:394125","OMIM:233500","OMIM:612289","NORD:1201","Orphanet:2095"],"synonyms":[{"name":"FPS","type":"exact"},{"name":"Fontaine progeroid syndrome","type":"exact"},{"name":"GCM syndrome","type":"exact"},{"name":"GCMS","type":"exact"},{"name":"Gorlin Chaudhry Moss syndrome","type":"exact"},{"name":"Gorlin-Chaudhry-Moss Syndrome","type":"exact"},{"name":"Gorlin-Chaudhry-Moss syndrome","type":"exact"},{"name":"Petty Laxova Wiedemann syndrome","type":"related"},{"name":"Petty syndrome","type":"exact"},{"name":"Petty-Laxova-Wiedemann syndrome","type":"exact"},{"name":"craniofacial dysostosis, hypertrichosis, Hypoplasia of labia majora, dental and eye anomalies, patent ductus arteriosus, and normal intelligence","type":"exact"},{"name":"craniofacial dysostosis, hypertrichosis, hypoplasia of labia majora","type":"exact"},{"name":"craniofacial dysostosis, patent ductus arteriosus, hypertrichosis, hypoplasia of labia majora, dental and eye anomalies","type":"related"},{"name":"craniofacial dysostosis-genital, dental, cardiac anomalies syndrome","type":"exact"},{"name":"cranofacial dysostosis-hypertrichosis-hypoplasia of labia majora syndrome","type":"exact"},{"name":"dental and eye anomalies, patent ductus arteriosus, and normal intelligence","type":"exact"},{"name":"dental and eye anomalies-patent ductus arteriosus-normal intelligence syndrome","type":"exact"},{"name":"progeroid syndrome Petty type","type":"exact"},{"name":"progeroid syndrome congenital Petty type","type":"exact"},{"name":"progeroid syndrome, Petty type","type":"exact"},{"name":"progeroid syndrome, congenital, Petty type","type":"narrow"}],"termid":"MONDO:0012853","terms_by_termid":{"MONDO:0012853":null},"xrefs":{"Monarch":{"xref_id":"0012853"}}}


id: GO:0050692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein's DNA binding domain (DBD).","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA binding domain binding","synonyms":[{"name":"DBD binding","type":"exact"}],"termid":"GO:0050692"}


id: GO:2000170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-cysteine S-nitrosylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of peptidyl-cysteine S-nitrosylation","termid":"GO:2000169"},{"relation_name":"positively_regulates","term_name":"peptidyl-cysteine S-nitrosylation","termid":"GO:0018119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-cysteine S-nitrosylation","termid":"GO:2000170"}


id: PBO:0044808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 106A","termid":"PBO:0044808"}


id: SO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding alanyl tRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine_tRNA_primary_transcript","synonyms":[{"name":"alanine tRNA primary transcript","type":"exact"}],"termid":"SO:0000211"}


id: FYPO:0005388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad51 accumulates is lower than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:12023299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased number of Rad51 foci during cellular response to ionizing radiation","synonyms":[{"name":"decreased number of Rad51 foci during cellular response to IR","type":"exact"},{"name":"decreased number of Rad51 foci during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased number of Rad51 foci during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced number of Rad51 foci during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005388"}


id: PBO:0048888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 7","termid":"PBO:0048888"}


id: MONDO:0021829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agnathia-microstomia-synotia","secondary_identifiers":["MESH:C538059","MEDGEN:419145","UMLS:C2931718"],"synonyms":[{"name":"Plurimalformative syndrome","type":"related"},{"name":"agnathia, microstomia, synotia and cardiac and pulmonary maldevelopment","type":"related"}],"termid":"MONDO:0021829","xrefs":{"Monarch":{"xref_id":"0021829"}}}


id: MONDO:0100183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A susceptibility or predisposition to radioulnar synostosis in which the cause of the disease is a mutation in the SMAD6 gene.","definition_xrefs":["MONDO:patterns/susceptibility_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radioulnar synostosis, nonsyndromic, susceptibility to","secondary_identifiers":["OMIM:179300","UMLS:C5241445","MEDGEN:1712799"],"termid":"MONDO:0100183","xrefs":{"Monarch":{"xref_id":"0100183"}}}


id: MONDO:0100353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with herpesvirus-7.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent","PMID:28545483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roseolovirus infectious disease","termid":"MONDO:0005949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHV-7 infectious disease","synonyms":[{"name":"HHV-7 infection","type":"exact"},{"name":"herpesvirus-7 infectious disease","type":"exact"}],"termid":"MONDO:0100353","xrefs":{"Monarch":{"xref_id":"0100353"}}}


id: GO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses peptide antigen in association with an MHC class Ib protein complex on its cell surface. The peptide antigen may originate from an endogenous or exogenous protein. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen via MHC class Ib","synonyms":[{"name":"peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002428"}


id: PBO:0113435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific protein with a leucine zipper motif; subunit of the MIS complex which controls mRNA methylation during the induction of sporulation; homologous to human ZCH13H3, a subunit of the mammalian m6A methyltransferase complex","termid":"PBO:0113435"}


id: GO:0071305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin D","termid":"GO:0033280"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin D","synonyms":[{"name":"cellular response to calciferol","type":"exact"},{"name":"cellular response to cholecalciferol","type":"narrow"},{"name":"cellular response to ergocalciferol","type":"narrow"}],"termid":"GO:0071305"}


id: GO:0140621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short filamentous structure on the surface of a bacterial cell distinguished from other pili by their D-mannose-sensitive agglutinatination of erythrocytes. In E. coli, type I pili consist of a short tip fibrillum made up of the adhesin protein (FimH) and two minor subunits (FimG and FimF) that is joined to the pilus rod, a homopolymer of ~1000 FimA subunits.","definition_xrefs":["PMID:29345620","PMID:28496159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type I pilus","synonyms":[{"name":"type 1 pilus","type":"exact"},{"name":"type I fimbriae","type":"exact"},{"name":"type I pili","type":"exact"}],"termid":"GO:0140621"}


id: MOD:01116
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-farnesyl-L-cysteine methyl ester.","definition_xrefs":["RESID:AA0105#var","PubMed:15609361","RESID:AA0102#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"S-farnesyl-L-cysteine","termid":"MOD:00111"},{"relation_name":"has_functional_parent","term_name":"L-cysteine methyl ester","termid":"MOD:00114"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-farnesyl-L-cysteine methyl ester","synonyms":[{"name":"SFarnOMeCys","type":"exact"}],"termid":"MOD:01116"}


id: MONDO:0005873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections of the nervous system caused by fungi of the genus aspergillus, most commonly aspergillus fumigatus. Aspergillus infections may occur in immunocompetent hosts, but are more prevalent in individuals with immunologic deficiency syndromes. The organism may spread to the nervous system from focal infections in the lung, mastoid region, sinuses, inner ear, bones, eyes, gastrointestinal tract, and heart. Sinus infections may be locally invasive and enter the intracranial compartment, producing meningitis, fungal; cranial neuropathies; and abscesses in the frontal lobes of the brain. (From Joynt, Clinical Neurology, 1998, Ch 27, pp62-3)","definition_xrefs":["MESH:D020953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspergillosis","termid":"MONDO:0005657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaspergillosis","secondary_identifiers":["MEDGEN:199873","DOID:13565","UMLS:C0752342"],"termid":"MONDO:0005873","xrefs":{"Monarch":{"xref_id":"0005873"}}}


id: GO:1990025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Synaptic bouton found in the ventral horn of the spinal cord. F boutons range in diameter from 0.5 to 7 um and contain flattened or pleomorphic synaptic vesicles.","definition_xrefs":["NIF_Subcellular:nlx_subcell_100206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"F bouton","termid":"GO:1990025"}


id: GO:0004438
data:
  {"annotated_genes":["SJAG_03248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66808],"is_not":false,"summary":null,"term":"GO:0004438"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3-phosphate + H2O = 1-phosphatidyl-1D-myo-inositol + phosphate.","definition_xrefs":["EC:3.1.3.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol monophosphate phosphatase activity","termid":"GO:0052744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-6809720","Reactome:R-HSA-1675994","Reactome:R-HSA-1676114","Reactome:R-HSA-1676141","Reactome:R-HSA-1675795","MetaCyc:PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN","Reactome:R-HSA-6809777","Reactome:R-HSA-6809325","RHEA:12316","GO:0016315","Reactome:R-HSA-6809975"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol-3-phosphate 3-phosphohydrolase activity","type":"related"},{"name":"D-myo-inositol-1,3-bisphosphate 3-phosphohydrolase activity","type":"related"},{"name":"inositol 1,3-bisphosphate phosphatase activity","type":"related"},{"name":"inositol-1,3-bisphosphate 3-phosphatase activity","type":"related"},{"name":"inositol-polyphosphate 3-phosphatase activity","type":"related"},{"name":"phosphatidyl-3-phosphate 3-phosphohydrolase activity","type":"related"},{"name":"phosphatidylinositol-3-phosphatase activity","type":"exact"}],"termid":"GO:0004438","terms_by_termid":{"GO:0004438":null}}


id: MONDO:0012097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive spondylocostal dysostosis","termid":"MONDO:0010180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"spondylocostal dysostosis 2, autosomal recessive","secondary_identifiers":["DOID:0112362","MEDGEN:332481","UMLS:C1837549","GARD:9703","OMIM:608681"],"synonyms":[{"name":"SCDO2","type":"related"},{"name":"spondylocostal dysostosis 2","type":"related"},{"name":"spondylocostal dysostosis 2, autosomal recessive","type":"exact"}],"termid":"MONDO:0012097","xrefs":{"Monarch":{"xref_id":"0012097"}}}


id: PBO:0088974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas1","termid":"PBO:0088974"}


id: MONDO:0010355
data:
  {"annotated_genes":["SJAG_03635","SJAG_03286","SJAG_01465"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88999,89000,89001],"is_not":false,"summary":null,"term":"MONDO:0010355"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Claes-Jensen type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:719161008","GARD:16744","Orphanet:85279","DOID:0060809","UMLS:C1845243","MESH:C564494","OMIM:300534","MEDGEN:335139"],"synonyms":[{"name":"MRXSCJ","type":"exact"},{"name":"MRXSJ","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Claes-Jensen type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"mental retardation, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"syndromic X-linked intellectual disability Claes-Jensen type","type":"exact"},{"name":"syndromic X-linked intellectual disability JARID1C-related","type":"exact"},{"name":"syndromic X-linked intellectual disability due to JARID1C mutation","type":"exact"},{"name":"syndromic X-linked mental retardation JARID1C-related","type":"exact"}],"termid":"MONDO:0010355","terms_by_termid":{"MONDO:0010355":null},"xrefs":{"Monarch":{"xref_id":"0010355"}}}


id: PBO:0038891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADD3 antisense RNA 1","termid":"PBO:0038891"}


id: PBO:0051977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO family member 4","termid":"PBO:0051977"}


id: PBO:0034649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-globally_decreased_mitotic_recombination","termid":"PBO:0034649"}


id: MONDO:0013401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the AP4E1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 51","secondary_identifiers":["MEDGEN:462406","OMIM:613744","DOID:0110803","UMLS:C3151056","GARD:13737","NORD:1990"],"synonyms":[{"name":"AP4E1 hereditary spastic paraplegia","type":"exact"},{"name":"CPSQ4","type":"exact"},{"name":"SPG51","type":"exact"},{"name":"Spastic Paraplegia 51","type":"exact"},{"name":"autosomal dominant spastic paraplegia 51","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, 4","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 4, formerly","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in AP4E1","type":"exact"},{"name":"hereditary spastic paraplegia type 51","type":"exact"},{"name":"spastic paraplegia 51, autosomal recessive","type":"related"},{"name":"spastic quadriplegic cerebral palsy 4","type":"exact"}],"termid":"MONDO:0013401","xrefs":{"Monarch":{"xref_id":"0013401"}}}


id: MONDO:0010767
data:
  {"annotated_genes":["SJAG_02035","SJAG_00786","SJAG_04663","SJAG_01465","SJAG_03635","SJAG_03286","SJAG_04324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87896,87897,87898,87899,87900,87901,87902],"is_not":false,"summary":null,"term":"MONDO:0010767"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"partial chromosome Y deletion","termid":"MONDO:0015607"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00786":null,"SJAG_01465":null,"SJAG_02035":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_04324":null,"SJAG_04663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, Y-linked, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:415000","UMLS:C1839071","MESH:C564030","DOID:0070187","GARD:18504","MEDGEN:326394"],"synonyms":[{"name":"Azf regions","type":"related"},{"name":"SPGFY2","type":"related"},{"name":"azoospermia Factor regions","type":"related"},{"name":"azoospermia, nonobstructive, Y-linked","type":"related"},{"name":"oligospermia, nonobstructive, Y-linked","type":"related"},{"name":"oligozoospermia, nonobstructive, Y-linked","type":"related"},{"name":"spermatogenic arrest, Y-linked","type":"related"},{"name":"spermatogenic failure, Y-linked, 2","type":"exact"},{"name":"spermatogenic failure, Y-linked, 2, Y-linked","type":"exact"},{"name":"spermatogenic failure, Y-linked, type 2","type":"exact"},{"name":"spermatogenic failure, nonobstructive, Y-linked","type":"related"}],"termid":"MONDO:0010767","terms_by_termid":{"MONDO:0010767":null},"xrefs":{"Monarch":{"xref_id":"0010767"}}}


id: PBO:0084475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA2","termid":"PBO:0084475"}


id: MONDO:0975882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-epilepsy-dental anomalies-facial dysmorphism syndrome","secondary_identifiers":["Orphanet:684232"],"termid":"MONDO:0975882","xrefs":{"Monarch":{"xref_id":"0975882"}}}


id: PR:Q9C0Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps602 gene.","definition_xrefs":["UniProtKB:Q9C0Z7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.12","synonyms":[{"name":"Spom972h-rps602","type":"exact"}],"termid":"PR:Q9C0Z7"}


id: MONDO:0014186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the ARL2BP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa with or without situs inversus","secondary_identifiers":["ICD10CM:H35.5","MEDGEN:1658130","UMLS:C4747737","OMIM:615434","DOID:0110419","GARD:15965"],"synonyms":[{"name":"ARL2BP retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in ARL2BP","type":"exact"},{"name":"retinitis pigmentosa with or without situs inversus","type":"exact"}],"termid":"MONDO:0014186","xrefs":{"Monarch":{"xref_id":"0014186"}}}


id: PBO:0052021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Josephin domain containing 1","termid":"PBO:0052021"}


id: GO:0071325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mannitol","termid":"GO:0010555"},{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mannitol stimulus","termid":"GO:0071325"}


id: PBO:0060453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase","termid":"PBO:0060453"}


id: PBO:0054172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1545","termid":"PBO:0054172"}


id: PBO:0076891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 45","termid":"PBO:0076891"}


id: PBO:0089074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase Erg8","termid":"PBO:0089074"}


id: PBO:0060953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor kappa B subunit 1","termid":"PBO:0060953"}


id: GO:0070550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the chromatin structure of the rDNA repeats is compacted. In S. cerevisiae, condensation and resolution of the rDNA occurs during anaphase.","definition_xrefs":["GOC:dgf","PMID:10811823","PMID:15137940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"part_of","term_name":"nucleolar chromatin organization","termid":"GO:1990700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"rDNA chromatin condensation","synonyms":[{"name":"rDNA condensation","type":"exact"},{"name":"rDNA packaging","type":"exact"}],"termid":"GO:0070550"}


id: PBO:0004348
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple carboxylase deficiency","termid":"PBO:0004348"}


id: GO:0052516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052516)","synonyms":[{"name":"induction by organism of symbiont JA-mediated defense response","type":"narrow"},{"name":"induction by organism of symbiont jasmonic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of symbiont JA-mediated defense response","type":"exact"},{"name":"positive regulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"}],"termid":"GO:0052516"}


id: GO:0016785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a selenium-containing group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"selenotransferase activity","secondary_identifiers":["GO:0016786","EC:2.9.1.-"],"synonyms":[{"name":"transferase activity, transferring selenium-containing groups","type":"exact"}],"termid":"GO:0016785"}


id: GO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular permeability","termid":"GO:0043114"}


id: GO:1905056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A calcium-transporting P-type ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","PMID:22972962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type calcium transporter activity","termid":"GO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"ATP phosphohydrolase (Ca2+-transporting) involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"ATPase-coupled calcium ion transmembrane transporter activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"Ca(2+)-transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-pumping ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ABC transporter involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium efflux ATPase involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium-translocating P-type ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium-transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"plasma membrane Ca-ATPase involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"}],"termid":"GO:1905056"}


id: GO:0052757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of hexosaminic linkages in chondroitin, a linear polymer structure composed of the repeating disaccharide unit [->4)-D-glucuronic acid-(1->3)-N-acetyl-D-galactosamine-(1-], also written as [->4GlcUA1->3GalNAc1-].","definition_xrefs":["PMID:18390555","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endogalactosaminidase activity","termid":"GO:0033931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"chondroitin hydrolase activity","synonyms":[{"name":"chondroitin endo-beta-galactosaminidase activity","type":"exact"}],"termid":"GO:0052757"}


id: MONDO:0011902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of CMT1, with a variable clinical presentation that can range from severe impairment with onset in childhood to mild impairment appearing during adulthood. CMT1F is characterized by a progressive peripheral motor and sensory neuropathy with distal paresis in the lower limbs that varies from mild weakness to complete paralysis of the distal muscle groups, absent tendon reflexes and reduced nerve conduction. CMT1F represents the ''demyelinating'' form of CMT2E and is caused by mutations in the NEFL gene (8p21.2)..","definition_xrefs":["Orphanet:101085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1F","secondary_identifiers":["icd11.foundation:1160290076","UMLS:C1843164","DOID:0110149","GARD:9191","SCTID:719980006","MEDGEN:334337","MESH:C537987","OMIM:607734"],"synonyms":[{"name":"CMT 1F","type":"related"},{"name":"CMT1F","type":"exact"},{"name":"Charcot Marie Tooth disease type 1F","type":"related"},{"name":"Charcot-Marie-Tooth disease type 1 caused by mutation in NEFL","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1F","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1F","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1F","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1F","type":"related"},{"name":"NEFL Charcot-Marie-Tooth disease type 1","type":"exact"}],"termid":"MONDO:0011902","xrefs":{"Monarch":{"xref_id":"0011902"}}}


id: PR:Q9P7S7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 58 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00338","PANTHER:PTHR10894:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.06","secondary_identifiers":["UniProtKB:Q9P7S7"],"synonyms":[{"name":"Spom972h-NOP58","type":"exact"}],"termid":"PR:Q9P7S7"}


id: MONDO:0850076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic unisquamosal craniosynostosis","secondary_identifiers":["MEDGEN:1843002","Orphanet:620146","GARD:22473","UMLS:C5680400"],"termid":"MONDO:0850076","xrefs":{"Monarch":{"xref_id":"0850076"}}}


id: PBO:0081151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP91 zinc finger protein, atypical E3 ubiquitin ligase","termid":"PBO:0081151"}


id: GO:1900456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of invasive growth in response to glucose limitation by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:16568252","PMID:12024013","GOC:dgf","PMID:8710886","PMID:15466424","PMID:10373537","PMID:10591965","PMID:9987114","GOC:TermGenie","PMID:9811878"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invasive growth in response to glucose limitation by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900456)","synonyms":[{"name":"regulation of colony morphology by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of invasive growth in response to glucose limitation by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900456"}


id: MONDO:0006040
data:
  {"annotated_genes":["SJAG_00547","SJAG_01524"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[89166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009504"}]},"cv_name":"mondo","definition":"Metabolic acidosis characterized by the accumulation of lactate in the body. It is caused by tissue hypoxia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00547":null,"SJAG_01524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"lactic acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D000140","SCTID:91273001","EFO:1000036","MEDGEN:1717","UMLS:C0001125"],"termid":"MONDO:0006040","terms_by_termid":{"MONDO:0009504":null,"MONDO:0012557":null},"xrefs":{"Monarch":{"xref_id":"0006040"}}}


id: PBO:0065192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 4","termid":"PBO:0065192"}


id: MONDO:0017137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Onchocerciasis is a form of filariasis, caused by the parasitic worm Onchocerca volvulus, transmitted by the black fly. The infection can either be asymptomatic or manifest as an ocular disease (river blindness) with itchy eyes, erythema, photophobia, onchodermatitis or onchocercal skin disease (classified into acute papular, chronic papular, lichenified, atrophic, and depigmentated) and onchocercomas (over bony prominences). Other classic clinical manifestations are ichthyosis-like lesions (''lizard skin'') and ''hanging groin'', which may be associated with lymphadenopathy.","definition_xrefs":["Orphanet:2737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"},{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"onchocerciasis","secondary_identifiers":["MEDGEN:14477","MedDRA:10039202","ICD10CM:B73","SCTID:38539003","GARD:7252","ICD9:125.3","MESH:D009855","DOID:11678","EFO:0007402","ICD10WHO:B73","UMLS:C0029001","icd11.foundation:106136071","NCIT:C34861","MedDRA:10030314"],"synonyms":[{"name":"Onchocerca volvulus infection","type":"exact"},{"name":"River blindness","type":"related"},{"name":"Robles' disease","type":"related"},{"name":"infection by Onchocerca volvulus","type":"exact"},{"name":"infection caused by Onchocerca volvulus","type":"related"},{"name":"onchocerciasis","type":"exact"},{"name":"onchocercosis","type":"related"},{"name":"volvulosis","type":"exact"}],"termid":"MONDO:0017137","xrefs":{"Monarch":{"xref_id":"0017137"}}}


id: PBO:0088907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane borate efflux transmembrane transporter Bor1","termid":"PBO:0088907"}


id: GO:2001189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"is_a","term_name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:2001188"},{"relation_name":"negatively_regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"negative regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"negative regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"negative regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001189"}


id: PBO:0011994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBR ubiquitin ligase Ubr11","termid":"PBO:0011994"}


id: PBO:0050918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 1","termid":"PBO:0050918"}


id: MONDO:0015780
data:
  {"annotated_genes":["SJAG_04266","SJAG_00566","SJAG_01378","SJAG_00083","SJAG_04754","SJAG_01836","SJAG_04627","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007485"},{"annotations":[87388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013521"},{"annotations":[87021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014690"},{"annotations":[87226,87225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009136"},{"annotations":[87385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013519"},{"annotations":[87387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013520"},{"annotations":[87196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014600"},{"annotations":[87653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031057"},{"annotations":[88406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010584"}]},"cv_name":"mondo","definition":"Dyskeratosis congenita (DC) is a rare ectodermal dysplasia that often presents with the classic triad of nail dysplasia, skin pigmentary changes, and oral leukoplakia associated with a high risk of bone marrow failure (BMF) and cancer.","definition_xrefs":["Orphanet:1775"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"hereditary poikiloderma","termid":"MONDO:0016382"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with combined immunodeficiency (obsolete MONDO:0018035)","termid":"MONDO:0018035"},{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation syndrome with hamartosis (obsolete MONDO:0020063)","termid":"MONDO:0020063"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete excretory apparatus of the lacrimal system anomaly (obsolete MONDO:0020195)","termid":"MONDO:0020195"},{"relation_name":"excluded_subClassOf","term_name":"conjunctival tumor","termid":"MONDO:0020204"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01378":null,"SJAG_01836":null,"SJAG_04266":null,"SJAG_04627":null,"SJAG_04754":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200342","NCIT:C111802","NANDO:2200715","OMIMPS:127550","UMLS:C0265965","DOID:2729","NANDO:1200304","MedDRA:10062759","NORD:1071","SCTID:74911008","MESH:D019871","icd11.foundation:1531033936","GARD:10905","MEDGEN:78580"],"synonyms":[{"name":"DC","type":"exact"},{"name":"DKC","type":"exact"},{"name":"Hoyeraal-Hreidarsson syndrome","type":"related"},{"name":"Zinsser Cole Engman syndrome","type":"related"},{"name":"Zinsser-Engman-Cole syndrome","type":"exact"},{"name":"dyskeratosis congenita","type":"exact"}],"termid":"MONDO:0015780","terms_by_termid":{"MONDO:0007485":null,"MONDO:0009136":null,"MONDO:0010584":null,"MONDO:0013519":null,"MONDO:0013520":null,"MONDO:0013521":null,"MONDO:0014600":null,"MONDO:0014690":null,"MONDO:0031057":null},"xrefs":{"Monarch":{"xref_id":"0015780"}}}


id: GO:0015030
data:
  {"annotated_genes":["SJAG_03901","SJAG_01761"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97984,117113],"is_not":false,"summary":null,"term":"GO:0015030"}]},"cv_name":"cellular_component","definition":"A class of nuclear body, first seen after silver staining by Ramon y Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA.","definition_xrefs":["PMID:10944589","PMID:7559785","NIF_Subcellular:nlx_subcell_090901","PMID:11031238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01761":null,"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"Cajal body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cajal_body"],"synonyms":[{"name":"Gemini of coiled bodies","type":"related"},{"name":"Gems","type":"related"},{"name":"coiled body","type":"exact"}],"termid":"GO:0015030","terms_by_termid":{"GO:0015030":null}}


id: PBO:0046898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 21 member E, pseudogene","termid":"PBO:0046898"}


id: MONDO:0100055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intraosseous spindle cell rhabdomyosarcoma characterized by the fusion of the EWSR1 or FUS gene with the TFCP2 gene, or the MEIS1 gene with the NCOA2 gene.","definition_xrefs":["NCIT:C178236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell rhabdomyosarcoma","termid":"MONDO:0002581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intraosseous spindle cell rhabdomyosarcoma with TFCP2/NCOA2 rearrangements","secondary_identifiers":["UMLS:C5554888","MEDGEN:1791329"],"synonyms":[{"name":"intraosseous rhabdomyosarcoma defined by FUS-TFCP2 fusion","type":"related"},{"name":"intraosseous rhabdomyosarcoma with FUS-TFCP2 fusion","type":"narrow"}],"termid":"MONDO:0100055","xrefs":{"Monarch":{"xref_id":"0100055"}}}


id: GO:0034858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxybenzothiazole + 1/2 O2 = 2,6-dihydroxybenzothiazole.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxybenzothiazole monooxygenase activity (obsolete GO:0034858)","termid":"GO:0034858"}


id: PATO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"old","termid":"PATO:0000308"}


id: PBO:0089664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh4","termid":"PBO:0089664"}


id: FYECO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which naphthaleneacetic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ naphthaleneacetic acid","termid":"FYECO:0000267"}


id: GO:0098934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in a dendrite from the postsynapse towards the cell body.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic transport","termid":"GO:0098935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"retrograde dendritic transport","termid":"GO:0098934"}


id: PBO:0056652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 19","termid":"PBO:0056652"}


id: PBO:0047033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 98 member A","termid":"PBO:0047033"}


id: FYPO:0005840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that does not have uniform thickness and does not extend over the entire cell division site.","definition_xrefs":["PMID:26877082","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"incomplete, asymmetric septum","synonyms":[{"name":"discontinuous, asymmetric secondary septum","type":"exact"},{"name":"incomplete, asymmetric secondary cell septum","type":"exact"},{"name":"incomplete, asymmetric secondary cell septum during mitotic cell cycle","type":"related"},{"name":"incomplete, asymmetric secondary cell septum during vegetative growth","type":"exact"},{"name":"incomplete, asymmetric secondary septum","type":"exact"}],"termid":"FYPO:0005840"}


id: PBO:0049520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.L variant histone 1Q","termid":"PBO:0049520"}


id: MONDO:0009789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonarteritic anterior ischemic optic neuropathy, susceptibility to","secondary_identifiers":["UMLS:C1847711","MEDGEN:338294","OMIM:258660"],"synonyms":[{"name":"Naion, susceptibility to","type":"related"},{"name":"nonarteritic anterior ischemic optic neuropathy, susceptibility to","type":"exact"},{"name":"optic neuropathy, anterior ischemic, susceptibility to","type":"related"},{"name":"susceptibility to nonarteritic anterior ischaemic optic neuropathy","type":"related"},{"name":"susceptibility to nonarteritic anterior ischemic optic neuropathy","type":"related"}],"termid":"MONDO:0009789","xrefs":{"Monarch":{"xref_id":"0009789"}}}


id: PBO:0059677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 43","termid":"PBO:0059677"}


id: PBO:0048534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8","termid":"PBO:0048534"}


id: GO:0030370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for intercellular adhesion molecule-3 (ICAM-3), such as DC-SIGN and LFA-1.","definition_xrefs":["PMID:11473836","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"intercellular adhesion molecule-3 receptor binding","synonyms":[{"name":"ICAM-3 receptor binding","type":"exact"},{"name":"ICAM-3 receptor ligand","type":"narrow"},{"name":"intercellular adhesion molecule-3 receptor ligand","type":"narrow"}],"termid":"GO:0030370"}


id: GO:0007409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells.","definition_xrefs":["GOC:pr","GOC:pg","GOC:dph","GOC:jid","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis","secondary_identifiers":["GO:0007410"],"synonyms":[{"name":"axon growth","type":"narrow"},{"name":"axon morphogenesis","type":"exact"},{"name":"neuron long process generation","type":"exact"}],"termid":"GO:0007409"}


id: GO:1902259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:11299204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"}


id: MONDO:1012547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous degeneration, non-human animal","termid":"MONDO:1012002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitreous degeneration, dog","secondary_identifiers":["OMIA:002409-9615"],"termid":"MONDO:1012547","xrefs":{"Monarch":{"xref_id":"1012547"}}}


id: MONDO:0010677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Mabry type","secondary_identifiers":["MESH:C564096","OMIM:310000","MEDGEN:326551","UMLS:C1839670"],"synonyms":[{"name":"muscular dystrophy, Mabry type","type":"exact"}],"termid":"MONDO:0010677","xrefs":{"Monarch":{"xref_id":"0010677"}}}


id: GO:0047500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-borneol + NAD+ = (1R, 4R)-camphor + H+ + NADH.","definition_xrefs":["RHEA:17329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-borneol dehydrogenase activity","secondary_identifiers":["MetaCyc:+-BORNEOL-DEHYDROGENASE-RXN","EC:1.1.1.198","KEGG_REACTION:R02944"],"synonyms":[{"name":"(+)-borneol:NAD+ oxidoreductase activity","type":"related"},{"name":"bicyclic monoterpenol dehydrogenase activity","type":"related"}],"termid":"GO:0047500"}


id: PBO:0060661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-protein coding RNA, upstream of F2R/PAR1","termid":"PBO:0060661"}


id: PBO:0068844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 82, pseudogene","termid":"PBO:0068844"}


id: PBO:0029970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_mitotic_cell_cycle","termid":"PBO:0029970"}


id: PBO:0060344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IXB","termid":"PBO:0060344"}


id: PBO:0050499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B9","termid":"PBO:0050499"}


id: FYPO:0003741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which cytochrome-c oxidase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal cytochrome-c oxidase activity","termid":"FYPO:0001937"},{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0002114"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0005447","FYPO:0000138","FYPO:0000652","FYPO:0001985","FYPO:0000002","FYPO:0002114","FYPO:0000707"],"is_obsolete":false,"name":"abolished cytochrome-c oxidase activity","synonyms":[{"name":"cytochrome-c oxidase activity abolished","type":"exact"}],"termid":"FYPO:0003741"}


id: PBO:0075340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase","termid":"PBO:0075340"}


id: FYPO:0004900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of thiamine measured in a cell is lower than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular thiamine level during stationary phase","synonyms":[{"name":"decreased cellular thiamine level in stationary phase","type":"exact"},{"name":"decreased cellular vitamin B1 level during stationary phase","type":"exact"},{"name":"decreased thiamine accumulation during stationary phase","type":"related"},{"name":"reduced cellular thiamine level during stationary phase","type":"exact"}],"termid":"FYPO:0004900"}


id: PBO:0044765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 49","termid":"PBO:0044765"}


id: PBO:0060994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nescient helix-loop-helix 1","termid":"PBO:0060994"}


id: MONDO:0007440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bipolar I disorder","termid":"MONDO:0001866"},{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 1","secondary_identifiers":["MEDGEN:377615","DOID:0080220","OMIM:125480","MESH:C565111","UMLS:C1852197"],"synonyms":[{"name":"MAFD1","type":"exact"},{"name":"MAJOR affective disorder 1","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 1","type":"exact"},{"name":"manic-depressive psychosis","type":"related"},{"name":"manic-depressive psychosis, autosomal","type":"related"}],"termid":"MONDO:0007440","xrefs":{"Monarch":{"xref_id":"0007440"}}}


id: PBO:0050237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 15","termid":"PBO:0050237"}


id: PBO:0029640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_TPCK","termid":"PBO:0029640"}


id: GO:0050281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + glyoxylate = 3-hydroxypyruvate + glycine.","definition_xrefs":["EC:2.6.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-serine-glyoxylate transaminase activity","secondary_identifiers":["RHEA:19125","MetaCyc:SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-serine:glyoxylate aminotransferase activity","type":"related"},{"name":"SGAT activity","type":"related"},{"name":"serine--glyoxylate aminotransferase activity","type":"exact"}],"termid":"GO:0050281"}


id: FYPO:0002449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer signal recognition particles (SRPs) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"signal recognition particles present in decreased numbers","synonyms":[{"name":"SRPs present in decreased numbers","type":"exact"},{"name":"decreased level of SRPs","type":"related"},{"name":"decreased signal recognition particle formation during vegetative growth","type":"related"},{"name":"fewer signal recognition particles present during vegetative growth","type":"exact"},{"name":"signal recognition particles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"signal recognition particles present in decreased numbers during vegetative growth","type":"exact"},{"name":"signal recognition particles present in reduced numbers","type":"exact"}],"termid":"FYPO:0002449"}


id: GO:0008953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: penicillin + H2O = a carboxylate + 6-aminopenicillanate.","definition_xrefs":["EC:3.5.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"penicillin amidase activity","secondary_identifiers":["MetaCyc:PENICILLIN-AMIDASE-RXN","RHEA:18693"],"synonyms":[{"name":"alpha-acylamino-beta-lactam acylhydrolase activity","type":"related"},{"name":"ampicillin acylase activity","type":"related"},{"name":"benzylpenicillin acylase activity","type":"related"},{"name":"novozym 217","type":"related"},{"name":"palmitoleoyl [acyl-carrier protein]-dependent acyltransferase activity","type":"exact"},{"name":"penicillin acylase activity","type":"related"},{"name":"penicillin amidohydrolase activity","type":"related"},{"name":"semacylase activity","type":"related"}],"termid":"GO:0008953"}


id: GO:0046435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(3-hydroxy)phenylpropionate metabolic process","synonyms":[{"name":"3-(3-hydroxy)phenylpropionate metabolism","type":"exact"}],"termid":"GO:0046435"}


id: MONDO:0004119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometrial small cell carcinoma (obsolete MONDO:0004119)","termid":"MONDO:0004119","xrefs":{"Monarch":{"xref_id":"0004119"}}}


id: MONDO:0030323
data:
  {"annotated_genes":["SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88252],"is_not":false,"summary":null,"term":"MONDO:0030323"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 31","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1786855","UMLS:C5543627","OMIM:619422","DOID:0070412"],"synonyms":[{"name":"SCAR31","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 31","type":"exact"}],"termid":"MONDO:0030323","terms_by_termid":{"MONDO:0030323":null},"xrefs":{"Monarch":{"xref_id":"0030323"}}}


id: PBO:0085839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YDL144C is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0085839"}


id: MONDO:0000192
data:
  {"annotated_genes":["SJAG_03150","SJAG_03149"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88652,88653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014526"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"polyglucosan body myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:615895"],"termid":"MONDO:0000192","terms_by_termid":{"MONDO:0014526":null},"xrefs":{"Monarch":{"xref_id":"0000192"}}}


id: MONDO:0030051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with autistic features and language delay, with or without seizures","secondary_identifiers":["GARD:18522","DOID:0081430","UMLS:C5394447","MEDGEN:1715081","OMIM:618906"],"synonyms":[{"name":"IDDALDS","type":"exact"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH AUTISTIC FEATURES AND LANGUAGE DELAY, WITH OR WITHOUT SEIZURES","type":"exact"},{"name":"intellectual developmental disorder with autistic features and language delay, with or without seizures","type":"exact"}],"termid":"MONDO:0030051","xrefs":{"Monarch":{"xref_id":"0030051"}}}


id: PBO:0109351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA sno530","termid":"PBO:0109351"}


id: GO:0009201
data:
  {"annotated_genes":["SJAG_03114","SJAG_04849","SJAG_00438","SJAG_05204","SJAG_00915","SJAG_00533","SJAG_00542","SJAG_MIT37","SJAG_00985","SJAG_02105","SJAG_05024","SJAG_MIT15","SJAG_04422","SJAG_04122","SJAG_MIT09","SJAG_03708","SJAG_07003","SJAG_02564","SJAG_03925","SJAG_00133","SJAG_02887","SJAG_02598","SJAG_00836","SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[65809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[69762,94918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[104189,65807,76796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[120009],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[117844,96797,121090,91076,94801,121084,109783,104991,95227,103775,106978,105605,121096,105631,110766,109875,95818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[65808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00533":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03708":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04849":null,"SJAG_05024":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside triphosphate anabolism","type":"exact"},{"name":"ribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"ribonucleoside triphosphate formation","type":"exact"},{"name":"ribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009201","terms_by_termid":{"GO:0006183":null,"GO:0006228":null,"GO:0006241":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:1905707":null}}


id: PBO:0048604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 8 homolog","termid":"PBO:0048604"}


id: GO:0008541
data:
  {"annotated_genes":["SJAG_03408","SJAG_00738","SJAG_01203","SJAG_04211","SJAG_02992","SJAG_00762","SJAG_04144","SJAG_04572","SJAG_01652","SJAG_03321","SJAG_04484","SJAG_02900"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62171,63439,70671,73146,74667,76111,76138,78351,80036,81374,100900,117153],"is_not":false,"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"The subcomplex of the proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome regulatory particle","termid":"GO:0005838"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00738":null,"SJAG_00762":null,"SJAG_01203":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome regulatory particle, lid subcomplex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0008541","terms_by_termid":{"GO:0008541":null}}


id: PBO:0028037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_disassembly","termid":"PBO:0028037"}


id: PBO:0017706
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae BET2","termid":"PBO:0017706"}


id: MONDO:0018095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Weaver-Williams syndrome is a multiple congenital anomalies syndrome characterized by moderate-to-severe intellectual disability, decreased muscle mass, microcephaly, facial dysmorphism (prominent ears, midfacial hypoplasia, small mouth and cleft palate), clinodactyly of the fingers, delayed osseous maturation and generalized bone hypoplasia. The syndrome has been described in a brother and sister and an autosomal recessive mode of inheritance has been suggested. There have been no further descriptions in the literature since 1977.","definition_xrefs":["Orphanet:3448"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weaver-Williams syndrome","secondary_identifiers":["MEDGEN:1392915","UMLS:C0796198","GARD:5545"],"termid":"MONDO:0018095","xrefs":{"Monarch":{"xref_id":"0018095"}}}


id: PBO:0079382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI","termid":"PBO:0079382"}


id: MONDO:0014049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ochoa syndrome in which the cause of the disease is a mutation in the LRIG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ochoa syndrome","termid":"MONDO:0000463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"urofacial syndrome 2","secondary_identifiers":["UMLS:C3554520","OMIM:615112","GARD:15907","MEDGEN:767434"],"synonyms":[{"name":"LRIG2 Ochoa syndrome","type":"exact"},{"name":"Ochoa syndrome caused by mutation in LRIG2","type":"exact"},{"name":"UFS2","type":"related"},{"name":"urofacial syndrome 2","type":"exact"},{"name":"urofacial syndrome type 2","type":"exact"}],"termid":"MONDO:0014049","xrefs":{"Monarch":{"xref_id":"0014049"}}}


id: PBO:0079031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-4","termid":"PBO:0079031"}


id: GO:0070658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new neuromast sensory hair cells to replace those lost or destroyed by injury.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell differentiation","termid":"GO:0048886"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"},{"relation_name":"part_of","term_name":"neuromast regeneration","termid":"GO:0070657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell differentiation involved in neuromast regeneration","termid":"GO:0070658"}


id: PBO:0083015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defining member of the SET3 histone deacetylase complex; which is a meiosis-specific repressor of sporulation genes; necessary for efficient transcription by RNAPII; one of two yeast proteins that contains both SET and PHD domains; SET3 has a paralog, SET4, that arose from the whole genome duplication","termid":"PBO:0083015"}


id: PBO:0051124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-2 (pseudogene)","termid":"PBO:0051124"}


id: GO:1900642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of austinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of austinol biosynthetic process","termid":"GO:1900640"},{"relation_name":"positively_regulates","term_name":"austinol biosynthetic process","termid":"GO:1900560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of austinol biosynthetic process","synonyms":[{"name":"activation of austinol anabolism","type":"exact"},{"name":"activation of austinol biosynthesis","type":"exact"},{"name":"activation of austinol biosynthetic process","type":"narrow"},{"name":"activation of austinol formation","type":"exact"},{"name":"activation of austinol synthesis","type":"exact"},{"name":"positive regulation of austinol anabolism","type":"exact"},{"name":"positive regulation of austinol biosynthesis","type":"exact"},{"name":"positive regulation of austinol formation","type":"exact"},{"name":"positive regulation of austinol synthesis","type":"exact"},{"name":"up regulation of austinol anabolism","type":"exact"},{"name":"up regulation of austinol biosynthesis","type":"exact"},{"name":"up regulation of austinol biosynthetic process","type":"exact"},{"name":"up regulation of austinol formation","type":"exact"},{"name":"up regulation of austinol synthesis","type":"exact"},{"name":"up-regulation of austinol anabolism","type":"exact"},{"name":"up-regulation of austinol biosynthesis","type":"exact"},{"name":"up-regulation of austinol biosynthetic process","type":"exact"},{"name":"up-regulation of austinol formation","type":"exact"},{"name":"up-regulation of austinol synthesis","type":"exact"},{"name":"upregulation of austinol anabolism","type":"exact"},{"name":"upregulation of austinol biosynthesis","type":"exact"},{"name":"upregulation of austinol biosynthetic process","type":"exact"},{"name":"upregulation of austinol formation","type":"exact"},{"name":"upregulation of austinol synthesis","type":"exact"}],"termid":"GO:1900642"}


id: PATO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congested","termid":"PATO:0001836"}


id: MONDO:0005425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of the lymphatic vessels of the lower extremities that is caused by chronic exposure to irritant soils.","definition_xrefs":["Wikipedia:Podoconiosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elephantiasis","termid":"MONDO:0005424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"podoconiosis","secondary_identifiers":["ICD9:457.1","UMLS:C1280469","EFO:0004712","DOID:0050138","MEDGEN:473377","SCTID:47595008"],"synonyms":[{"name":"elephantiasis from soil","type":"exact"},{"name":"non-filarial elephantiasis","type":"exact"},{"name":"nonfilarial elephantiasis","type":"exact"},{"name":"soil elephantiasis","type":"exact"}],"termid":"MONDO:0005425","xrefs":{"Monarch":{"xref_id":"0005425"}}}


id: FYPO:0004990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells in the G2 phase of the mitotic cell cycle undergo meiotic nuclear divisions, and premeiotic DNA replication does not occur. In these cells, sister chromatids precociously segregate at the first meiotic nuclear division. Normally, upon nitrogen starvation cells arrest the mitotic cell in G1 phase, and then proceed into conjugation, premeiotic DNA replication and meiosis.","definition_xrefs":["PMID:15298676","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished premeiotic DNA replication","termid":"FYPO:0002044"},{"relation_name":"is_a","term_name":"abolished premeiotic DNA replication","termid":"FYPO:0002044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"G2-exit meiosis with abolished premeiotic DNA replication","synonyms":[{"name":"G2-exit meiotic nuclear division with abolished premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0004990"}


id: GO:0033060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition or aggregation of coloring matter in an ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus pigmentation","termid":"GO:0033060"}


id: GO:0018845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxychromene-2-carboxylate = (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate. (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate is also known as trans-o-hydroxybenzylidenepyruvate.","definition_xrefs":["RHEA:27401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"2-hydroxychromene-2-carboxylate isomerase activity","secondary_identifiers":["EC:5.99.1.4","KEGG_REACTION:R05137","MetaCyc:RXNN-386","UM-BBD_reactionID:r0337"],"termid":"GO:0018845"}


id: PBO:0043983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 1","termid":"PBO:0043983"}


id: PBO:0017527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLI interacting factor family phosphatase Psr1 (predicted)","termid":"PBO:0017527"}


id: PBO:0027097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_at_rDNA_replication_pause_sites","termid":"PBO:0027097"}


id: GO:0009446
data:
  {"annotated_genes":["SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane; putrescine can be synthesized from arginine or ornithine and is the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"putrescine anabolism","type":"exact"},{"name":"putrescine biosynthesis","type":"exact"},{"name":"putrescine formation","type":"exact"},{"name":"putrescine synthesis","type":"exact"}],"termid":"GO:0009446","terms_by_termid":{"GO:0033387":null}}


id: GO:0008837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: LL-2,6-diaminopimelate = meso-2,6-diaminopimelate.","definition_xrefs":["EC:5.1.1.7","RHEA:15393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"diaminopimelate epimerase activity","secondary_identifiers":["MetaCyc:DIAMINOPIMEPIM-RXN","KEGG_REACTION:R02735"],"synonyms":[{"name":"LL-2,6-diaminoheptanedioate 2-epimerase activity","type":"related"}],"termid":"GO:0008837"}


id: GO:0050532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-O-phospho-3-sulfolactate + H2O = (R)-3-sulfolactate + phosphate.","definition_xrefs":["EC:3.1.3.71","RHEA:23416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-phosphosulfolactate phosphatase activity","secondary_identifiers":["MetaCyc:R229-RXN","KEGG_REACTION:R05789"],"synonyms":[{"name":"(2R)-phosphosulfolactate phosphohydrolase activity","type":"related"},{"name":"(R)-2-phospho-3-sulfolactate phosphohydrolase activity","type":"related"},{"name":"2-phosphosulpholactate phosphatase activity","type":"exact"},{"name":"ComB phosphatase activity","type":"related"}],"termid":"GO:0050532"}


id: GO:0017050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sphingosine + ATP = sphingosine 1-phosphate + ADP.","definition_xrefs":["RHEA:35847"],"gene_count":0,"genotype_count":0,"name":"obsolete D-erythro-sphingosine kinase activity (obsolete GO:0017050)","synonyms":[{"name":"sphingosine kinase activity","type":"broad"}],"termid":"GO:0017050"}


id: GO:1904385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an angiotensin stimulus. Angiotensin is any of three physiologically active peptides (angiotensin II, III, or IV) processed from angiotensinogen.","definition_xrefs":["GO_REF:0000071","PMID:22982863","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to angiotensin","termid":"GO:1990776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to angiotensin","termid":"GO:1904385"}


id: PBO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein (predicted)","termid":"PBO:0002634"}


id: PBO:0040486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7 like 2","termid":"PBO:0040486"}


id: PBO:0070379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 1","termid":"PBO:0070379"}


id: GO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which precursor cell type acquires the specialized features of a hematopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells.","definition_xrefs":["GOC:add","GOC:rl","PMID:16551251","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic progenitor cell differentiation","synonyms":[{"name":"haematopoietic progenitor cell differentiation","type":"exact"},{"name":"haemopoietic progenitor cell differentiation","type":"exact"},{"name":"hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:0002244"}


id: MONDO:0042974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parainfluenza virus type 3 is one of a group of common viruses known as human parainfluenza viruses (HPIV) that cause a variety of respiratory illnesses. Symptoms usually develop between 2 and 7 days from the time of exposure and typically resolve in 7-10 days. Symptoms may include fever, runny nose, and cough. HPIV-3 can also cause bronchiolitis, bronchitis, and pneumonia. Infants and young children are particularly susceptible to HPIV-3 infections, though older adults and those with a weakened immune system are also at risk for complications. HPIVs are usually spread from an infected person to others through coughing, sneezing, and/or touching. There is currently no vaccine to protect against parainfluenza virus infections. Most HPIV infections resolve on their own and do not require special treatment, though medical intervention may be necessary for severe breathing problems. Most adults have antibodies against parainfluenza but can get repeat infections.","definition_xrefs":["GARD:0004215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respirovirus infectious disease","termid":"MONDO:0005940"},{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 3 infectious disease","secondary_identifiers":["MEDGEN:547264","UMLS:C0276324","GARD:4215","ICD9:079.89","SCTID:30270006"],"synonyms":[{"name":"PIV3","type":"related"},{"name":"human parainfluenza virus type 3","type":"related"},{"name":"human respirovirus 3 caused disease or disorder","type":"exact"},{"name":"human respirovirus 3 disease or disorder","type":"exact"},{"name":"human respirovirus 3 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 3","type":"related"},{"name":"infection caused by parainfluenza virus 3","type":"related"},{"name":"infection due to human parainfluenza virus 3","type":"exact"},{"name":"infection due to parainfluenza virus 3","type":"related"}],"termid":"MONDO:0042974","xrefs":{"Monarch":{"xref_id":"0042974"}}}


id: PBO:0004746
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNL3L","termid":"PBO:0004746"}


id: RO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"relationship between a neuron and a neuron projection bundle (e.g.- tract or nerve bundle) that one or more of its projections travels through.\\n","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculates_with","termid":"RO:0002101"}


id: FYPO:0003551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which an RNA catabolic process is abnormal.","definition_xrefs":["GO:0006401","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"abnormal RNA catabolic process","synonyms":[{"name":"abnormal RNA breakdown","type":"exact"},{"name":"abnormal RNA catabolism","type":"exact"},{"name":"abnormal RNA degradation","type":"exact"}],"termid":"FYPO:0003551"}


id: PBO:0069304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 560, pseudogene","termid":"PBO:0069304"}


id: PBO:0068630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 10, pseudogene","termid":"PBO:0068630"}


id: PR:O14099
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.16 gene.","definition_xrefs":["UniProtKB:O14099","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C2F3.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.16","synonyms":[{"name":"Spom972h-SPAC2F3.16","type":"exact"}],"termid":"PR:O14099"}


id: PBO:0078997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 4-1","termid":"PBO:0078997"}


id: _global:assayed_substrate
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a catalytic activity phenotype and a substrate, such as a gene product, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_substrate","termid":"_global:assayed_substrate"}


id: PBO:0067529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 673, pseudogene","termid":"PBO:0067529"}


id: PR:Q9P7Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.02c gene.","definition_xrefs":["UniProtKB:Q9P7Q1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.02c","synonyms":[{"name":"Spom972h-SPAC186.02c","type":"exact"}],"termid":"PR:Q9P7Q1"}


id: PBO:0065979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleic acid export 1","termid":"PBO:0065979"}


id: PBO:0042812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 2","termid":"PBO:0042812"}


id: MONDO:0008140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossified ear cartilages","secondary_identifiers":["MESH:C563488","MEDGEN:331587","OMIM:165670","UMLS:C1833791"],"synonyms":[{"name":"ossified ear cartilages","type":"exact"}],"termid":"MONDO:0008140","xrefs":{"Monarch":{"xref_id":"0008140"}}}


id: PBO:0091276
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type Cyclin Pombe","termid":"PBO:0091276"}


id: GO:0015101
data:
  {"annotated_genes":["SJAG_01890","SJAG_02060","SJAG_00543","SJAG_02962","SJAG_02059","SJAG_01589","SJAG_01096","SJAG_02125","SJAG_02941","SJAG_03652","SJAG_04731","SJAG_04725","SJAG_00626","SJAG_00015","SJAG_04984","SJAG_02144","SJAG_04135","SJAG_02062","SJAG_00699","SJAG_02133","SJAG_04718","SJAG_02152","SJAG_00835","SJAG_06598","SJAG_04295","SJAG_02113","SJAG_04637","SJAG_00763","SJAG_03256","SJAG_00019","SJAG_04673","SJAG_02029","SJAG_04588","SJAG_03808","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58267,66688,120278,120279,120280,120281,120282,120283,120284,120474],"is_not":false,"summary":null,"term":"GO:0015101"},{"annotations":[113867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140485"},{"annotations":[117161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015220"},{"annotations":[77326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[71962,79749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[102637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[99303,102319,81015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[112013,104757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[81008,99304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[104758,112014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[102320,81012,112015,104759,99305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[109882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[102312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[92563,81013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[81009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[101205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015200"},{"annotations":[72458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015489"},{"annotations":[119476,92092,120774,92093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031925"},{"annotations":[119477,92095,120775,92094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031927"},{"annotations":[78037,82061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000095"},{"annotations":[72459,119355,112926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015606"},{"annotations":[105591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[92099,92098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00015":null,"SJAG_00019":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_00763":null,"SJAG_00835":null,"SJAG_01096":null,"SJAG_01589":null,"SJAG_01890":null,"SJAG_02029":null,"SJAG_02059":null,"SJAG_02060":null,"SJAG_02062":null,"SJAG_02113":null,"SJAG_02125":null,"SJAG_02133":null,"SJAG_02144":null,"SJAG_02152":null,"SJAG_02941":null,"SJAG_02962":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03652":null,"SJAG_03808":null,"SJAG_04135":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04673":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04731":null,"SJAG_04984":null,"SJAG_06598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"organic cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-561054","Reactome:R-HSA-9795207","Reactome:R-HSA-2161500","Reactome:R-HSA-549304","Reactome:R-HSA-549322","Reactome:R-HSA-9794270","Reactome:R-HSA-549279","Reactome:R-HSA-561072","Reactome:R-HSA-549129","Reactome:R-HSA-9794523"],"termid":"GO:0015101","terms_by_termid":{"GO:0000064":null,"GO:0000095":null,"GO:0005290":null,"GO:0005302":null,"GO:0015101":null,"GO:0015182":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015200":null,"GO:0015220":null,"GO:0015234":null,"GO:0015489":null,"GO:0015606":null,"GO:0031925":null,"GO:0031927":null,"GO:0033229":null,"GO:0034216":null,"GO:0061459":null,"GO:0090422":null,"GO:0140485":null}}


id: PBO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_high_osmolarity","termid":"PBO:0031349"}


id: PBO:0074271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 12 like","termid":"PBO:0074271"}


id: PBO:0087322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Snf2p family member with ATP-dependent chromatin remodeling activity; has a role in silencing at the mating type locus, telomeres and centromeres; enriched at centromeres and is required for correct chromatin structure around centromeres, as well as at the boundary element of the silent HMR; recruited to DNA double-strand breaks (DSBs) where it promotes 5' strand resection of DSBs; potential Cdc28p substrate","termid":"PBO:0087322"}


id: PBO:0052937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 22-1","termid":"PBO:0052937"}


id: MONDO:0009984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that is characterized by onset of symptoms in the fifth or sixth decade of life.","definition_xrefs":["DOID:0110421","PMID:1424244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"late-adult onset retinitis pigmentosa","secondary_identifiers":["UMLS:C1849400","GARD:15230","ICD10CM:H35.5","MESH:C564840","OMIM:268025","MEDGEN:340316"],"synonyms":[{"name":"retinitis pigmentosa, 'Senile'","type":"related"},{"name":"retinitis pigmentosa, late-ADULT onset","type":"related"},{"name":"senile retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0009984","xrefs":{"Monarch":{"xref_id":"0009984"}}}


id: GO:0042119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a neutrophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte activation","termid":"GO:0036230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil activation","termid":"GO:0042119"}


id: PBO:0065942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 pseudogene 2","termid":"PBO:0065942"}


id: PBO:0063060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 1","termid":"PBO:0063060"}


id: GO:0051028
data:
  {"annotated_genes":["SJAG_04360","SJAG_00992","SJAG_00298","SJAG_04310","SJAG_01065","SJAG_02209","SJAG_02704","SJAG_00093","SJAG_01715","SJAG_00471","SJAG_04202","SJAG_01584","SJAG_04656","SJAG_03002","SJAG_04472","SJAG_04645","SJAG_01529","SJAG_01652","SJAG_01083","SJAG_04017","SJAG_03283","SJAG_00641","SJAG_03300","SJAG_04347","SJAG_04379","SJAG_01449","SJAG_02425","SJAG_03593","SJAG_04721","SJAG_04536","SJAG_05328","SJAG_03693","SJAG_04589","SJAG_01374","SJAG_01467","SJAG_03986","SJAG_03847","SJAG_01185","SJAG_02534","SJAG_04480","SJAG_00375","SJAG_00178","SJAG_04115","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58865,60303,65733],"is_not":false,"summary":null,"term":"GO:0051028"},{"annotations":[91433,103110,119268,79392,61865,63440,82072,75965,74603,74687,78565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[75071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[79208,104604,118310,94141,76350,82295,75641,111843,76596,77568,98483,113114,113742,71783,117800,73280,112415,76256,116456,75070,76025,74917,98895,120947,105897,118052,109606,103821,120028,103355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02425":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03283":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mRNA transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0051028","terms_by_termid":{"GO:0006406":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null}}


id: GO:0071754
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polymer of five or six IgM core units each composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains, held together by disulfide bonds; the individual IgM core units are held together via disulfide bonds with a single J chain polypeptide acting as a bridge between two of the polymeric units. Circulating IgM is present in the extracellular space, in mucosal areas or other tissues, or in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:20176268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgM immunoglobulin complex","termid":"GO:0071753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"IgM immunoglobulin complex, circulating","synonyms":[{"name":"IgM antibody","type":"exact"}],"termid":"GO:0071754"}


id: SO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe decrease in cds length that deletes one or more entire codons from the coding sequence but does not change any remaining codons.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_deletion","termid":"SO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conservative_inframe_deletion","synonyms":[{"name":"conservative decrease in CDS length","type":"related"},{"name":"conservative inframe deletion","type":"exact"}],"termid":"SO:0001825"}


id: PBO:0084663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 3-oxoacyl-[acyl-carrier-protein] reductase; may comprise a type II mitochondrial fatty acid synthase along with Mct1p; human homolog CBR4 complements yeast null mutant","termid":"PBO:0084663"}


id: GO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a plasmacytoid dendritic cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["PMID:16174109","PMID:15990333","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmacytoid dendritic cell activation","termid":"GO:0002270"},{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell activation involved in immune response","synonyms":[{"name":"plasmacytoid dendritic cell activation during immune response","type":"related"}],"termid":"GO:0002271"}


id: PBO:0029896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint","termid":"PBO:0029896"}


id: FYPO:0000634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to centromere during vegetative growth","synonyms":[{"name":"abolished protein localisation to centromere during vegetative growth","type":"exact"},{"name":"abolished protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"protein absent from centromere during vegetative growth","type":"related"},{"name":"protein localization to centromere abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000634"}


id: GO:0031570
data:
  {"annotated_genes":["SJAG_01677","SJAG_00327","SJAG_01708","SJAG_02563","SJAG_01146","SJAG_03898","SJAG_00429","SJAG_03529","SJAG_04671","SJAG_01680","SJAG_03942","SJAG_01010","SJAG_01084","SJAG_01855","SJAG_02098","SJAG_00623","SJAG_01429","SJAG_03720","SJAG_01044","SJAG_05373","SJAG_01076","SJAG_04140","SJAG_02074","SJAG_01873","SJAG_02576","SJAG_00169","SJAG_03048","SJAG_00486","SJAG_04287","SJAG_03927","SJAG_02026","SJAG_01205","SJAG_04280","SJAG_01605","SJAG_04332","SJAG_03160","SJAG_03026","SJAG_02266","SJAG_02771","SJAG_03695","SJAG_00364","SJAG_00640"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[108585,93377,118056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[79969,113190,82017,118230,116465,118003,95507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[80812,108588,118802,74220,93378,76791,95912,81402,102497,118058,101141,101307,73009,119108,111299,119281,114029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[93255,111653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[91067,93379,103011,74222,113722,61704,101309,111300,62528,119021,67987,77143,81275,60996,108589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[80814,102817,113723,97963,101310,114030,75796,108590,93380,96490,91068,104314,76230,81187,81274,91114,92391,118060,109638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and progresses through signal transduction and ends with cell cycle effector processes.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0072401"],"synonyms":[{"name":"DNA integrity checkpoint","type":"exact"},{"name":"signal transduction involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:0031570","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0033315":null,"GO:0044773":null,"GO:0044778":null}}


id: FYPO:0006499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which disassembly of the cell wall at the site of cell-cell fusion during mating is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cell wall organization","termid":"FYPO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000301","FYPO:0004805","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall disassembly at cell fusion site","synonyms":[{"name":"abnormal cell wall disassembly at cell fusion site during conjugation with cellular fusion","type":"exact"},{"name":"abnormal cell wall disassembly at cell fusion site during mating","type":"exact"},{"name":"abnormal cell wall disassembly at cell-cell fusion focus","type":"exact"},{"name":"abnormal cell wall disassembly at cell-cell fusion site","type":"exact"},{"name":"abnormal cell wall disassembly during mating","type":"exact"},{"name":"abnormal fungal-type cell wall disassembly at cell fusion site","type":"exact"},{"name":"abnormal fungal-type cell wall disassembly involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0006499"}


id: PR:O42883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.06 gene.","definition_xrefs":["UniProtKB:O42883","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.06","synonyms":[{"name":"Spom972h-SPAC8E11.06","type":"exact"}],"termid":"PR:O42883"}


id: GO:0031827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2B serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2B serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 2B receptor binding","type":"exact"},{"name":"type 2B serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031827"}


id: MONDO:1010116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The sudden unexpected death of an apparently healthy infant under one year of age that remains unexplained after a thorough case investigation, including performance of a complete autopsy with ancillary testing, examination of the death scene, and review of the clinical history.","definition_xrefs":["PMID:31502215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sudden unexpected death in pediatrics","termid":"MONDO:1010120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden unexpected infant death","synonyms":[{"name":"accidental suffocation and strangulation in bed","type":"exact"},{"name":"sudden infant death syndrome","type":"exact"},{"name":"undetermined cause of death","type":"exact"}],"termid":"MONDO:1010116","xrefs":{"Monarch":{"xref_id":"1010116"}}}


id: FYPO:0007675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing sucrose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"abolished cell population growth on sucrose carbon source","synonyms":[{"name":"abolished growth on sucrose carbon source","type":"broad"},{"name":"abolished sucrose utilization","type":"related"},{"name":"abolished vegetative cell population growth on sucrose carbon source","type":"exact"},{"name":"cell population growth on sucrose carbon source abolished","type":"exact"}],"termid":"FYPO:0007675"}


id: GO:0018930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving methylquinoline, an aromatic compound composed of a benzene ring and a heterocyclic N-containing ring.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete methylquinoline metabolic process (obsolete GO:0018930)","synonyms":[{"name":"2-methylquinoline metabolic process","type":"narrow"},{"name":"2-methylquinoline metabolism","type":"narrow"},{"name":"3-methylquinoline metabolic process","type":"narrow"},{"name":"3-methylquinoline metabolism","type":"narrow"},{"name":"quinaldine metabolic process","type":"narrow"},{"name":"quinaldine metabolism","type":"narrow"}],"termid":"GO:0018930"}


id: PBO:0117206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfite efflux transmembrane transporter Ssu1","termid":"PBO:0117206"}


id: GO:0003388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron over time, that contributes to the development of the amphid sensory organ.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"neuron differentiation involved in amphid sensory organ development","termid":"GO:0003387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron development involved in amphid sensory organ development","termid":"GO:0003388"}


id: GO:0005188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete larval serum protein (sensu Insecta) (obsolete GO:0005188)","synonyms":[{"name":"arylphorin","type":"narrow"},{"name":"larval serum protein (sensu Insecta)","type":"exact"}],"termid":"GO:0005188"}


id: MONDO:0014073
data:
  {"annotated_genes":["SJAG_02919","SJAG_04567","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87061,87062,87063],"is_not":false,"summary":null,"term":"MONDO:0014073"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the CRYAB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3554649","OMIM:615184","MEDGEN:767563","GARD:15916","DOID:0110450"],"synonyms":[{"name":"CMD1II","type":"exact"},{"name":"CRYAB familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1II","type":"related"},{"name":"cardiomyopathy, dilated, type 1II","type":"exact"},{"name":"dilated cardiomyopathy type 1II","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in CRYAB","type":"exact"}],"termid":"MONDO:0014073","terms_by_termid":{"MONDO:0014073":null},"xrefs":{"Monarch":{"xref_id":"0014073"}}}


id: PBO:0044719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 6 (pseudogene)","termid":"PBO:0044719"}


id: PBO:0074777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3J","termid":"PBO:0074777"}


id: PBO:0068511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 101, pseudogene","termid":"PBO:0068511"}


id: FYPO:0007594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitophagy","termid":"FYPO:0000499"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitophagy during nitrogen starvation","synonyms":[{"name":"abolished autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"abolished autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"abolished autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"autophagy of mitochondrion abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007594"}


id: GO:0060954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a neural crest-derived cardiac glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac glial cell development","termid":"GO:0060952"},{"relation_name":"part_of","term_name":"neural crest-derived cardiac glial cell differentiation","termid":"GO:0060951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac glial cell development","termid":"GO:0060954"}


id: FYPO:0007370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium containing fructose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"},{"relation_name":"is_a","term_name":"increased cell population growth on fructose carbon source","termid":"FYPO:0009095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth rate on fructose carbon source","synonyms":[{"name":"enhanced growth on fructose","type":"related"},{"name":"fast cell population growth on fructose carbon source","type":"exact"},{"name":"increased cell population proliferation on fructose carbon source","type":"related"},{"name":"increased cell proliferation on fructose carbon source","type":"related"},{"name":"increased vegetative cell population growth rate on fructose carbon source","type":"exact"}],"termid":"FYPO:0007370"}


id: GO:0045175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, basal regions of the cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"basal protein localization","synonyms":[{"name":"basal protein localisation","type":"exact"},{"name":"establishment and maintenance of basal protein localization","type":"exact"},{"name":"establishment and maintenance of protein localization in basal part of cell","type":"exact"}],"termid":"GO:0045175"}


id: MONDO:0007921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare syndromic disorder characterized by the variable triad of characteristic yellow nails, chronic respiratory manifestations, and primary lymphedema.","definition_xrefs":["Orphanet:662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"yellow nail syndrome","secondary_identifiers":["icd11.foundation:47812081","NORD:1874","OMIM:153300","NCIT:C85238","EFO:1001452","MESH:D056684","MEDGEN:113164","ICD10CM:L60.5","DOID:0050468","ICD9:703.8","ICD9:757.0","MedDRA:10048244","SCTID:400211001","UMLS:C0221348","GARD:184"],"synonyms":[{"name":"YNS","type":"exact"},{"name":"Yns","type":"related"},{"name":"lymphedema and Yellow nails","type":"related"},{"name":"lymphedema with yellow nails","type":"exact"},{"name":"yellow nail syndrome","type":"exact"}],"termid":"MONDO:0007921","xrefs":{"Monarch":{"xref_id":"0007921"}}}


id: GO:0043043
data:
  {"annotated_genes":["SJAG_01351","SJAG_00988","SJAG_03494","SJAG_00792","SJAG_00469","SJAG_04032","SJAG_04031","SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107360,59796,96059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[80627,58127,110408,79324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[96005],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.","definition_xrefs":["GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03494":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9037628"],"synonyms":[{"name":"peptide anabolism","type":"exact"},{"name":"peptide biosynthesis","type":"exact"},{"name":"peptide formation","type":"exact"},{"name":"peptide synthesis","type":"exact"}],"termid":"GO:0043043","terms_by_termid":{"GO:0006750":null,"GO:0031169":null,"GO:1905569":null}}


id: PBO:0080485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5A","termid":"PBO:0080485"}


id: GO:0097320
data:
  {"annotated_genes":["SJAG_00185","SJAG_00700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74076,75845],"is_not":false,"summary":null,"term":"GO:0097320"}]},"cv_name":"biological_process","definition":"A membrane tubulation process occurring in a plasma membrane.","definition_xrefs":["PMID:20730103","GOC:pr","GOC:BHF","PMID:15252009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane tubulation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"membrane tubulation","type":"broad"},{"name":"vesicle scission","type":"related"}],"termid":"GO:0097320","terms_by_termid":{"GO:0097320":null}}


id: GO:0035008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of the melanization defense response during injury or invasion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of melanization defense response","termid":"GO:0035007"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"positively_regulates","term_name":"melanization defense response","termid":"GO:0035006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of melanization defense response","synonyms":[{"name":"activation of melanization defense response","type":"narrow"},{"name":"positive regulation of melanization defence response","type":"exact"},{"name":"stimulation of melanization defense response","type":"narrow"},{"name":"up regulation of melanization defense response","type":"exact"},{"name":"up-regulation of melanization defense response","type":"exact"},{"name":"upregulation of melanization defense response","type":"exact"}],"termid":"GO:0035008"}


id: PBO:0065485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 4","termid":"PBO:0065485"}


id: FYPO:0007701
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121354],"is_not":false,"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is longer than normal, has one nucleus, and the mitotic cell cycle is arrested with nuclei at the mitotic G2/M phase transition.","definition_xrefs":["PMID:33683349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0007702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"related"},{"name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable elongated mononucleate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"}],"termid":"FYPO:0007701","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0063498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 7","termid":"PBO:0063498"}


id: MONDO:1012535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy and juvenile mortality, non-human animal","termid":"MONDO:1011651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and juvenile mortality, dog","secondary_identifiers":["OMIA:002256-9615"],"termid":"MONDO:1012535","xrefs":{"Monarch":{"xref_id":"1012535"}}}


id: PBO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-phosphate mutase (predicted)","termid":"PBO:0000357"}


id: PR:000085720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00083.","definition_xrefs":["PomBase:VW","PMID:37459529","PRO:DAN"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me3(K36)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00083","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K36-trimethylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K36Me3","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00083","type":"related"},{"name":"hht1/Me3(K36)","type":"exact"}],"termid":"PR:000085720"}


id: PBO:0076968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 like Y-linked","termid":"PBO:0076968"}


id: MONDO:0100440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing Asperger sydrome.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asperger syndrome, susceptibility to","secondary_identifiers":["OMIMPS:608638"],"termid":"MONDO:0100440","xrefs":{"Monarch":{"xref_id":"0100440"}}}


id: MONDO:0018989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent acute pancreatitis (RAP) is characterized by repeated attacks of acute pancreatitis (AP), which is defined as an acute inflammatory process of the pancreas with variable involvement of other regional tissues or remote organ systems.","definition_xrefs":["Orphanet:64740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"recurrent acute pancreatitis","secondary_identifiers":["MEDGEN:489943","SCTID:197458008","icd11.foundation:300900170","MedDRA:10033657","NCIT:C184324","UMLS:C0267937"],"termid":"MONDO:0018989","xrefs":{"Monarch":{"xref_id":"0018989"}}}


id: MONDO:0016031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism-anorexia-cachexia-eye and skin anomalies syndrome","secondary_identifiers":["Orphanet:1969","MESH:C536384","MEDGEN:419355","GARD:2221","UMLS:C2931183"],"synonyms":[{"name":"Friedman-Goodman syndrome","type":"exact"},{"name":"faces syndrome","type":"exact"},{"name":"facial features (unique), anorexia, cachexia, eye and skin anomalies","type":"related"}],"termid":"MONDO:0016031","xrefs":{"Monarch":{"xref_id":"0016031"}}}


id: PBO:0043803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 3","termid":"PBO:0043803"}


id: PR:O74536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssp2 gene.","definition_xrefs":["UniProtKB:O74536","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"Spom972h-ssp2","type":"exact"}],"termid":"PR:O74536"}


id: PATO:0001152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having susceptibilty toward an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"susceptibility toward","termid":"PATO:0001043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptible toward","synonyms":[{"name":"susceptible","type":"exact"}],"termid":"PATO:0001152"}


id: MONDO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality in which the meninges protrude through a defect in the spinal column or the cranium.","definition_xrefs":["NCIT:C105595"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spina bifida","termid":"MONDO:0008449"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"meningocele","secondary_identifiers":["MESH:D008588","SCTID:171131006","NCIT:C101209","Orphanet:93968","MEDGEN:44356","HP:0002435","UMLS:C0025299","DOID:1088"],"synonyms":[{"name":"central nervous system meningocele","type":"exact"},{"name":"meningocele","type":"exact"},{"name":"meningocele (disease)","type":"exact"},{"name":"spinal meningocele","type":"narrow"}],"termid":"MONDO:0001147","xrefs":{"Monarch":{"xref_id":"0001147"}}}


id: PBO:0079547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1","termid":"PBO:0079547"}


id: SO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"RNA secondary structure that affects the stability of an RNA molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001957 RNA_stability_element (obsolete SO:0001957)","synonyms":[{"name":"rna stability element","type":"related"}],"termid":"SO:0001957"}


id: PBO:0048957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein Ib platelet subunit alpha","termid":"PBO:0048957"}


id: PBO:0005611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoprotein (RNP) complex (predicted)","termid":"PBO:0005611"}


id: FYPO:0005838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal with a cluster distal to each side of the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial aggregation","termid":"FYPO:0000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"symmetric mitochondrial aggregation","synonyms":[{"name":"bipolar intracellular mitochondrion distribution","type":"related"},{"name":"bipolar intracellular mitochondrion localisation","type":"related"},{"name":"bipolar intracellular mitochondrion localization","type":"related"},{"name":"bipolar mitochondrial aggregation","type":"related"},{"name":"bipolar mitochondrion distribution","type":"related"},{"name":"symmetric mitochondrial aggregation during mitotic cell cycle","type":"related"},{"name":"symmetric mitochondrial aggregation during vegetative growth","type":"exact"}],"termid":"FYPO:0005838"}


id: GO:0072338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactam metabolic process","synonyms":[{"name":"cellular lactam metabolic process","type":"exact"},{"name":"cellular lactam metabolism","type":"exact"}],"termid":"GO:0072338"}


id: GO:0009786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asymmetric cell division","termid":"GO:0009786"}


id: GO:1903573
data:
  {"annotated_genes":["SJAG_02244","SJAG_01528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79941,79423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a response to endoplasmic reticulum stress.","definition_xrefs":["GOC:TermGenie","PMID:11381086","GO_REF:0000058","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"negatively_regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01528":null,"SJAG_02244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to endoplasmic reticulum stress","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of ER stress response","type":"exact"},{"name":"down regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"down regulation of response to ER stress","type":"exact"},{"name":"down regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of ER stress response","type":"exact"},{"name":"down-regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of response to ER stress","type":"exact"},{"name":"down-regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of ER stress response","type":"exact"},{"name":"downregulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of response to ER stress","type":"exact"},{"name":"downregulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of ER stress response","type":"narrow"},{"name":"inhibition of cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"inhibition of response to ER stress","type":"narrow"},{"name":"inhibition of response to endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of ER stress response","type":"exact"},{"name":"negative regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of response to ER stress","type":"exact"}],"termid":"GO:1903573","terms_by_termid":{"GO:1904293":null}}


id: PR:000037316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein Crb2 (Schizosaccharomyces pombe) that is phosphorylated in two Thr residues within CDK consensus TP motifs, and a Thr within the sequence VPETV. Example: UniProtKB:P87074-1, Thr-187/Thr-215/Thr-235, MOD:00047.","definition_xrefs":["PomBase:AL","PMID:24074952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","termid":"PR:000029999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crb2/Phos(T187,T215,T235)","pombase_gene_id":"SPBC342.05","synonyms":[{"name":"Crb2 phosphorylated","type":"related"},{"name":"DNA repair protein rhp9 phosphorylated 1 (Schizosaccharomyces pombe)","type":"related"},{"name":"PomBase_original_PRO_term_name: DNA repair protein Crb2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"crb2/Phos(T187,T215,T235)","type":"exact"}],"termid":"PR:000037316"}


id: PBO:0090526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa4","termid":"PBO:0090526"}


id: PBO:0071482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 23","termid":"PBO:0071482"}


id: PBO:0073964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 13","termid":"PBO:0073964"}


id: GO:0031630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"regulates","term_name":"synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"regulation of synaptic vesicle fusion to pre-synaptic membrane","type":"exact"},{"name":"regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"}],"termid":"GO:0031630"}


id: FYPO:0002647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation during mitosis (obsolete FYPO:0002647)","synonyms":[{"name":"decreased peptidyl-threonine phosphorylation during mitosis","type":"exact"},{"name":"decreased protein threonine phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation during mitotic M phase","type":"related"},{"name":"decreased protein threonine phosphorylation during mitotic M phase during mitotic cell cycle","type":"related"},{"name":"decreased threonine phosphorylation during mitosis","type":"exact"},{"name":"reduced protein threonine phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0002647"}


id: MOD:00449
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:11999733","PubMed:12175151","Unimod:56","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetate labeling reagent (N-term) (heavy form, +3amu)","synonyms":[{"name":"Acetate labeling reagent (N-term & K) (heavy form, +3amu)","type":"related"},{"name":"Acetyl:2H(3)","type":"related"}],"termid":"MOD:00449"}


id: PBO:0039921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 19","termid":"PBO:0039921"}


id: FYPO:0001619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-lysine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular lysine level","synonyms":[{"name":"decreased cellular L-lysine level","type":"exact"},{"name":"decreased cellular lysine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lysine level during vegetative growth","type":"exact"},{"name":"decreased level of lysine in cell","type":"exact"},{"name":"reduced cellular lysine level","type":"exact"},{"name":"reduced level of lysine in cell","type":"exact"}],"termid":"FYPO:0001619"}


id: PBO:0070149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 63 pseudogene","termid":"PBO:0070149"}


id: PBO:0059044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMS19 homolog, cytosolic iron-sulfur assembly component","termid":"PBO:0059044"}


id: PBO:0047655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 7","termid":"PBO:0047655"}


id: GO:0003153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of the embryonic heart tube by sealing the edges of an epithelial fold.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube closure","termid":"GO:0060606"},{"relation_name":"part_of","term_name":"embryonic heart tube formation via epithelial folding","termid":"GO:0003145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"closure of embryonic heart tube","termid":"GO:0003153"}


id: FYPO:0005275
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121582,121487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[121504,121505,121503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a mitotic cell cycle phase transition normally.","definition_xrefs":["PomBase:mah","GO:0044772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase transition","termid":"FYPO:0005273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle phase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_01956","SJAG_03351","SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0005275","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: PBO:0064560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase 1","termid":"PBO:0064560"}


id: GO:0021572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 6 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:curators","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 development","termid":"GO:0021572"}


id: PR:Q9P7Z9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hap2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Z9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.20c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.20c","synonyms":[{"name":"Spom972h-hap2","type":"exact"}],"termid":"PR:Q9P7Z9"}


id: PBO:0011163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methyltransferase (predicted)","termid":"PBO:0011163"}


id: GO:0031982
data:
  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id: GO:0015803
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  {"annotated_genes":["SJAG_05346","SJAG_03970","SJAG_03591","SJAG_00991","SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112011,104755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[90035],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[93695,100831,95277],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"The directed movement of branched-chain amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Branched-chain amino acids are amino acids with a branched carbon skeleton without rings.","definition_xrefs":["GOC:ai","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02029":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04725":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"branched-chain amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1900755"],"synonyms":[{"name":"branched-chain aliphatic amino acid transport","type":"exact"},{"name":"branched-chain amino-acid anion transport","type":"exact"},{"name":"branched-chain amino-acid anions transport","type":"related"}],"termid":"GO:0015803","terms_by_termid":{"GO:1903714":null,"GO:1905533":null,"GO:1905534":null}}


id: PBO:0051688
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indolethylamine N-methyltransferase","termid":"PBO:0051688"}


id: GO:0060979
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differentiation of endothelial cells from progenitor cells that contributes to blood vessel development in the heart, and the de novo formation of blood vessels and tubes.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculogenesis","termid":"GO:0001570"},{"relation_name":"part_of","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasculogenesis involved in coronary vascular morphogenesis","synonyms":[{"name":"coronary vasculogenesis","type":"exact"},{"name":"vasculogenesis involved in coronary blood vessel morphogenesis","type":"exact"}],"termid":"GO:0060979"}


id: PBO:0085505
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; nascent Rps3p is bound by specific chaperone Yar1p during translation; homologous to mammalian ribosomal protein S3 and bacterial S3","termid":"PBO:0085505"}


id: PBO:0086150
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear migration; component of the mitochondria-ER-cortex-anchor (MECA); required for the association of mitochondria with the cell cortex and for accurate distribution of mitochondrial network; interacts with Mdm36p to link the ER and mitochondria at the cortex; localizes to the mother cell cortex and the bud tip; may mediate interactions of dynein and cytoplasmic microtubules with the cell cortex","termid":"PBO:0086150"}


id: PBO:0079965
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 3","termid":"PBO:0079965"}


id: GO:0035858
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an eosinophil cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:BHF","GOC:vk","CL:0000771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"eosinophil fate commitment","termid":"GO:0035854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil fate determination","synonyms":[{"name":"eosinophil cell fate determination","type":"exact"}],"termid":"GO:0035858"}


id: GO:2000924
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellodextrin metabolic process (obsolete GO:2000924)","synonyms":[{"name":"regulation of cellodextrin metabolism","type":"exact"}],"termid":"GO:2000924"}


id: MONDO:0017392
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pre-Descemet corneal dystrophy (PDCD) is a rare form of stromal corneal dystrophy characterized by focal, fine, gray opacities in the deep stroma immediately anterior to the Descemet membrane, with no effect on vision.","definition_xrefs":["Orphanet:293462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stromal corneal dystrophy","termid":"MONDO:0020213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pre-descemet corneal dystrophy","secondary_identifiers":["MEDGEN:573065","icd11.foundation:2027634766","SCTID:231934009","ICD9:371.56","UMLS:C0339282","GARD:21168"],"synonyms":[{"name":"PDCD","type":"exact"}],"termid":"MONDO:0017392","xrefs":{"Monarch":{"xref_id":"0017392"}}}


id: GO:0097717
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of copper (Cu) ions passing through the blood-cerebrospinal fluid barrier.","definition_xrefs":["GOC:sl","PMID:24614235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"},{"relation_name":"is_a","term_name":"transport across blood-cerebrospinal fluid barrier","termid":"GO:0150195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"copper ion transport across blood-cerebrospinal fluid barrier","synonyms":[{"name":"copper ion transport across BCB","type":"related"},{"name":"copper ion transport across BCSFB","type":"exact"},{"name":"copper ion transport across blood-CSF barrier","type":"exact"},{"name":"copper ion transport across blood/CSF barrier","type":"exact"},{"name":"copper ion transport across blood/cerebrospinal fluid barrier","type":"exact"}],"termid":"GO:0097717"}


id: GO:0001156
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  {"annotated_genes":["SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73696],"is_not":false,"summary":null,"term":"GO:0001156"}]},"cv_name":"molecular_function","definition":"Binding to a general RNA polymerase III transcription factor belonging to the TFIIC complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase III.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III general transcription initiation factor binding","termid":"GO:0001025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TFIIIC-class transcription factor complex binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"TFIIIC-class transcription factor binding","type":"exact"}],"termid":"GO:0001156","terms_by_termid":{"GO:0001156":null}}


id: PBO:0084349
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of the dynactin complex; dynactin is involved in partitioning the mitotic spindle between mother and daughter cells; putative ortholog of mammalian p150(glued)","termid":"PBO:0084349"}


id: GO:0033293
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a monocarboxylic acid, any organic acid containing one carboxyl (COOH) group or anion (COO-).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"monocarboxylic acid binding","termid":"GO:0033293"}


id: PBO:0006769
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5S rRNA (predicted)","termid":"PBO:0006769"}


id: GO:0031903
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id: MONDO:0001675
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete porphyria (obsolete MONDO:0001675)","termid":"MONDO:0001675","xrefs":{"Monarch":{"xref_id":"0001675"}}}


id: MONDO:0005791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease that results in infection located in mouth, has material basis in Human coxsackievirus A16, has material basis in Human enterovirus 71, has material basis in group B coxsackievirus, or has material basis in echoviruses, which are transmitted by ingestion of food contaminated with feces, transmitted by contact with pharyngeal secretions, or transmitted by droplet spread of oronasal secretions. The infection has symptom fever, has symptom sore throat, and has symptom lesions in the back area of the mouth, particularly the soft palate or tonsillar pillars.","definition_xrefs":["DOID:10883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpangina","secondary_identifiers":["EFO:0007306","ICD10CM:B08.5","SCTID:274102007","UMLS:C0019338","MEDGEN:42435","MESH:D006557","ICD9:074.0"],"synonyms":[{"name":"vesicular pharyngitis","type":"exact"}],"termid":"MONDO:0005791","xrefs":{"Monarch":{"xref_id":"0005791"}}}


id: GO:0070442
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaIIb subunit and one beta3 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alphaIIb-beta3 complex","synonyms":[{"name":"ITGA2B-ITGB3 complex","type":"narrow"},{"name":"alphaIIb-beta3 integrin complex","type":"exact"}],"termid":"GO:0070442"}


id: GO:0070428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"regulation of NOD1 signaling pathway","type":"exact"},{"name":"regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070428"}


id: MONDO:0014254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any otofaciocervical syndrome in which the cause of the disease is a mutation in the PAX1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otofaciocervical syndrome","termid":"MONDO:0008163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"otofaciocervical syndrome 2","secondary_identifiers":["UMLS:C5442121","GARD:16503","OMIM:615560","MEDGEN:1782278"],"synonyms":[{"name":"OFC2","type":"related"},{"name":"OTFCS2","type":"related"},{"name":"PAX1 otofaciocervical syndrome","type":"exact"},{"name":"otofaciocervical syndrome 2","type":"exact"},{"name":"otofaciocervical syndrome caused by mutation in PAX1","type":"exact"},{"name":"otofaciocervical syndrome type 2","type":"exact"}],"termid":"MONDO:0014254","xrefs":{"Monarch":{"xref_id":"0014254"}}}


id: MONDO:0012629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal dominant inheritance of attacks of dystonic or choreathetotic movements precipitated by stress, fatigue, coffee or alcohol intake or menstruation that has material basis in variation in the chromosome region 2q31.","definition_xrefs":["DOID:0090047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal nonkinesigenic dyskinesia","termid":"MONDO:0700088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"paroxysmal nonkinesigenic dyskinesia 2","secondary_identifiers":["NANDO:1200533","OMIM:611147","UMLS:C1970149","MEDGEN:370188","GARD:15510","MESH:C567001"],"synonyms":[{"name":"PNKD2","type":"related"},{"name":"dystonia 20","type":"related"},{"name":"paroxysmal nonkinesigenic dyskinesia 2","type":"exact"},{"name":"paroxysmal nonkinesigenic dyskinesia type 2","type":"exact"}],"termid":"MONDO:0012629","xrefs":{"Monarch":{"xref_id":"0012629"}}}


id: PBO:0031004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_dodecyl_sulfate","termid":"PBO:0031004"}


id: GO:0047944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-glutamate + ATP = alpha-L-glutamyl phosphate + ADP + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate 1-kinase activity (obsolete GO:0047944)","synonyms":[{"name":"ATP:L-glutamate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0047944"}


id: MONDO:0018876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mantle cell lymphoma is a rare form of malignant non-Hodgkin lymphoma affecting B lymphocytes in the lymph nodes in a region called the ``mantle zone''.","definition_xrefs":["Orphanet:52416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"mantle cell lymphoma","secondary_identifiers":["GARD:6969","MedDRA:10061275","DOID:0050746","NORD:1399","UMLS:C4721414","MESH:D020522","ICDO:9673/3","ICD10CM:C83.1","ONCOTREE:MCL","MEDGEN:1668377","EFO:1001469","icd11.foundation:1804127841","NCIT:C4337","ICD9:200.40","SCTID:443487006"],"synonyms":[{"name":"LCM","type":"exact"},{"name":"MCL","type":"exact"},{"name":"classical mantle cell lymphoma","type":"exact"},{"name":"lymphoma, mantle cell","type":"related"},{"name":"mantle cell lymphoma","type":"exact"},{"name":"mantle zone lymphoma","type":"exact"}],"termid":"MONDO:0018876","xrefs":{"Monarch":{"xref_id":"0018876"}}}


id: FYPO:0004428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic cytokinesis is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of cytokinesis","synonyms":[{"name":"increased rate of cytokinesis during mitotic cell cycle","type":"related"},{"name":"increased rate of cytokinesis during vegetative growth","type":"exact"},{"name":"increased rate of mitotic cytokinesis","type":"exact"}],"termid":"FYPO:0004428"}


id: PBO:0074303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1B-SULT1A4 readthrough (NMD candidate)","termid":"PBO:0074303"}


id: PR:O13932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BET1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00418","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein bet1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.13","secondary_identifiers":["UniProtKB:O13932"],"synonyms":[{"name":"Spom972h-BET1","type":"exact"}],"termid":"PR:O13932"}


id: PBO:0086859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative S-adenosylmethionine-dependent lysine methyltransferase; responsible for modifying Lys-390 in translational elongation factor EF-1 alpha (eEF1A); has seven beta-strand methyltransferase motif; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086859"}


id: PBO:0049202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor kainate type subunit 2","termid":"PBO:0049202"}


id: PBO:0049940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA3 antisense RNA 1","termid":"PBO:0049940"}


id: PBO:0056796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional ROCO family signaling regulator 1","termid":"PBO:0056796"}


id: GO:0016734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum-iron nitrogenase activity (obsolete GO:0016734)","synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016734"}


id: PBO:0084859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; required for respiration and for maintenance of the mitochondrial genome","termid":"PBO:0084859"}


id: PBO:0017412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-participates_in","termid":"PBO:0017412"}


id: MONDO:0015238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arrhinia-choanal atresia-microphthalmia syndrome (obsolete MONDO:0015238)","secondary_identifiers":["GARD:8755"],"synonyms":[{"name":"Bosma Arhinia Microphthalmia Syndrome","type":"exact"}],"termid":"MONDO:0015238","xrefs":{"Monarch":{"xref_id":"0015238"}}}


id: GO:0007049
data:
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id: GO:0031029
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id: MONDO:0012335
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id: PBO:0056649
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id: MONDO:0006379
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id: CHEBI:16811
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id: GO:0140013
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id: PBO:0077864
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id: PBO:0004331
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id: PBO:0084592
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id: PBO:0078143
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id: MONDO:0032624
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id: GO:0030773
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id: GO:0102639
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id: MONDO:0005964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the sphenoid sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoid sinusitis","secondary_identifiers":["NCIT:C35031","EFO:0007489","MEDGEN:11543","SCTID:13266007","UMLS:C0037886","DOID:10794","MESH:D015524"],"synonyms":[{"name":"sinusitis of sphenoid bone","type":"exact"},{"name":"sphenoid bone sinusitis","type":"exact"},{"name":"sphenoidal sinusitis","type":"exact"}],"termid":"MONDO:0005964","xrefs":{"Monarch":{"xref_id":"0005964"}}}


id: PBO:0085524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25B has a paralog, RPS25A, that arose from the whole genome duplication","termid":"PBO:0085524"}


id: MOD:01758
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01758"}


id: FYPO:0000986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter results in a higher-than-normal level of transcription at a given pheromone level.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased transcriptional response to pheromone at normal pheromone level (obsolete FYPO:0000986)","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones at normal pheromone level","type":"exact"},{"name":"increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"increased transcriptional response to pheromone","type":"related"},{"name":"sensitive to pheromone","type":"related"}],"termid":"FYPO:0000986"}


id: GO:0015505
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97489],"is_not":false,"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: uracil(out) + cation(out) = uracil(in) + cation(in).","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uracil transmembrane transporter activity","termid":"GO:0015210"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"uracil:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil permease activity","type":"related"},{"name":"uracil:cation symporter activity","type":"broad"}],"termid":"GO:0015505","terms_by_termid":{"GO:0015505":null}}


id: PBO:0078695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 6-1","termid":"PBO:0078695"}


id: PBO:0079634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 5, Y-linked","termid":"PBO:0079634"}


id: PBO:0075721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin pseudogene 2","termid":"PBO:0075721"}


id: MONDO:1040048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS2 gene.","definition_xrefs":["PMID:32620959","PMID:33688495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS2-related ciliopathy","synonyms":[{"name":"BBS2-related ciliopathy","type":"exact"}],"termid":"MONDO:1040048","xrefs":{"Monarch":{"xref_id":"1040048"}}}


id: GO:0030891
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses ubiquitin ligase activity; the complex is usually pentameric; for example, in mammals the subunits are pVHL, elongin B, elongin C, cullin-2 (Cul2), and Rbx1.","definition_xrefs":["GOC:mah","PMID:11865071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ubiquitin ligase complex","termid":"GO:0000153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"VCB complex","synonyms":[{"name":"VHL complex","type":"exact"},{"name":"pVHL-elongin C-elongin B complex","type":"exact"},{"name":"von Hippel-Lindau tumor suppressor complex","type":"exact"}],"termid":"GO:0030891"}


id: PBO:0004373
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds Forkhead 5'-TTT[G/A]TTTACA-3'","termid":"PBO:0004373"}


id: PBO:0027171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_during_mitosis","termid":"PBO:0027171"}


id: GO:0030402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete matrilysin-2 activity (obsolete GO:0030402)","synonyms":[{"name":"MMP-26","type":"exact"},{"name":"matrilysin-2 activity","type":"exact"},{"name":"matrix metalloproteinase 26","type":"exact"}],"termid":"GO:0030402"}


id: PBO:0077915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 6","termid":"PBO:0077915"}


id: PBO:0056679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEF2C antisense RNA 1","termid":"PBO:0056679"}


id: PBO:0067319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 405, pseudogene","termid":"PBO:0067319"}


id: GO:0046869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 2Fe-2S iron-sulfur cluster via tris-L-cysteinyl-L-aspartato diiron disulfide.","definition_xrefs":["RESID:AA0331"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-aspartato diiron disulfide (obsolete GO:0046869)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-aspartato diiron disulphide","type":"exact"}],"termid":"GO:0046869"}


id: MONDO:0019206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sparse hair-short stature-skin anomalies syndrome (obsolete MONDO:0019206)","termid":"MONDO:0019206","xrefs":{"Monarch":{"xref_id":"0019206"}}}


id: PBO:0058440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5004","termid":"PBO:0058440"}


id: GO:1902935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a septin ring.","definition_xrefs":["PMID:16325501","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"},{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to septin ring","synonyms":[{"name":"protein localisation in septin ring","type":"exact"},{"name":"protein localisation to septin ring","type":"exact"},{"name":"protein localization in septin ring","type":"exact"}],"termid":"GO:1902935"}


id: PR:Q9UUK7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoribosylglycinamide formyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05064","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.08c","secondary_identifiers":["UniProtKB:Q9UUK7"],"synonyms":[{"name":"5'-phosphoribosylglycinamide transformylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GAR transformylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GART (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-purN","type":"exact"}],"termid":"PR:Q9UUK7"}


id: GO:0008120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acylsphing-4-enine + UDP-alpha-D-glucose = a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + H+ + UDP.","definition_xrefs":["RHEA:12088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ceramide glucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1638104","MetaCyc:CERAMIDE-GLUCOSYLTRANSFERASE-RXN","EC:2.4.1.80"],"synonyms":[{"name":"UDP-glucose-ceramide glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acylsphingosine D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:ceramide glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acylsphingosine D-glucosyltransferase activity","type":"related"},{"name":"ceramide:UDP-glucose glucosyltransferase activity","type":"related"},{"name":"ceramide:UDPGlc glucosyltransferase activity","type":"related"},{"name":"glucosylceramide synthase activity","type":"related"},{"name":"uridine diphosphoglucose-ceramide glucosyltransferase activity","type":"related"}],"termid":"GO:0008120"}


id: PBO:0045370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 5","termid":"PBO:0045370"}


id: PBO:0050630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 5","termid":"PBO:0050630"}


id: PBO:0039293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG9 alpha-1,2-mannosyltransferase","termid":"PBO:0039293"}


id: PBO:0051600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 23 receptor","termid":"PBO:0051600"}


id: MONDO:0015005
data:
  {"annotated_genes":["SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88964],"is_not":false,"summary":null,"term":"MONDO:0015005"}]},"cv_name":"mondo","definition":"A pyridoxine-dependent epilepsy that has material basis in homozygous or compound heterozygous mutation in the PLPBP gene on chromosome 8p11.23.","definition_xrefs":["DOID:0080769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine-dependent epilepsy","termid":"MONDO:0009945"},{"relation_name":"is_a","term_name":"epilepsy, early-onset","termid":"MONDO:0957599"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"epilepsy, early-onset, vitamin B6-dependent","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934599","OMIM:617290","UMLS:C4310632"],"synonyms":[{"name":"EPVB6D","type":"exact"},{"name":"epilepsy, early-onset, vitamin B6-dependent","type":"exact"},{"name":"epilepsy, early-onset, vitamin B6-dependent; EPVB6D","type":"exact"}],"termid":"MONDO:0015005","terms_by_termid":{"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0015005"}}}


id: PBO:0088223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein-membrane adaptor Vac8","termid":"PBO:0088223"}


id: MONDO:0022850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital sucrose isomaltose malabsorption (obsolete MONDO:0022850)","termid":"MONDO:0022850","xrefs":{"Monarch":{"xref_id":"0022850"}}}


id: PR:Q96VG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ost4 gene.","definition_xrefs":["UniProtKB:Q96VG2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.15c","synonyms":[{"name":"OTase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ost4","type":"exact"},{"name":"oligosaccharyl transferase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96VG2"}


id: PBO:0053687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 880","termid":"PBO:0053687"}


id: GO:0047615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: actinomycin + H2O = actinomycinic monolactone.","definition_xrefs":["EC:3.1.1.39","MetaCyc:ACTINOMYCIN-LACTONASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"actinomycin lactonase activity","synonyms":[{"name":"actinomycin lactonohydrolase activity","type":"related"}],"termid":"GO:0047615"}


id: MONDO:0007929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Epstein syndrome (obsolete MONDO:0007929)","secondary_identifiers":["NCIT:C131639"],"termid":"MONDO:0007929","xrefs":{"Monarch":{"xref_id":"0007929"}}}


id: PBO:0029377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lipid_particles_present_in_decreased_numbers","termid":"PBO:0029377"}


id: GO:0010146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructan a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"fructan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-822"],"synonyms":[{"name":"fructan anabolism","type":"exact"},{"name":"fructan biosynthesis","type":"exact"},{"name":"fructan formation","type":"exact"},{"name":"fructan synthesis","type":"exact"},{"name":"levan biosynthesis","type":"exact"},{"name":"levan biosynthetic process","type":"exact"}],"termid":"GO:0010146"}


id: MOD:01168
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00793"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to dehydroalanine.","definition_xrefs":["PubMed:1815586","PubMed:8239649","PubMed:6838602","PubMed:2914619","RESID:AA0181","PubMed:10220322","PubMed:7947813","PubMed:1547888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Cys)","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Ser)","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dHAla","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01168","terms_by_termid":{"MOD:00793":null}}


id: MONDO:0015061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurogenic thoracic outlet syndrome (NTOS) is a form of thoracic outlet syndrome (TOS) that presents with pain, paresthesias and weakness in an upper extremity and is divided into true NTOS and disputed NTOS.","definition_xrefs":["Orphanet:100073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic outlet syndrome","termid":"MONDO:0005979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogenic thoracic outlet syndrome","secondary_identifiers":["UMLS:C0751549","GARD:19749","MEDGEN:155880","SCTID:2040007"],"synonyms":[{"name":"NTOS","type":"exact"},{"name":"neurogenic TOS","type":"exact"},{"name":"neurogenic cervical rib syndrome","type":"exact"},{"name":"neurogenic costoclavicular syndrome","type":"exact"},{"name":"neurogenic thoracic outlet compression syndrome","type":"exact"}],"termid":"MONDO:0015061","xrefs":{"Monarch":{"xref_id":"0015061"}}}


id: PBO:0082229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, Ub-ligase adaptor for Rsp5p; regulates starvation- and substrate-induced Ub-dependent endocytosis of select plasma membrane localized amino acid transporters, recruiting Rsp5p to its targets; role in basal internalization and turnover of Ste2p, mating and zygote formation; recruits Rsp5p to Ste2p via its 2 PPXY motifs; inhibited by Npr1p-mediated phosphorylation, affecting cytosol and plasma membrane translocation; localization regulated by Rsp5p-dependent ubiquitination","termid":"PBO:0082229"}


id: PBO:0083590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YPR012W is not an essential gene","termid":"PBO:0083590"}


id: PBO:0047372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO3 divergent transcript","termid":"PBO:0047372"}


id: FYPO:0002695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}


id: PBO:0062144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 14 pseudogene","termid":"PBO:0062144"}


id: GO:0009727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an ethylene (ethene) stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to ethylene","termid":"GO:0009723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of ethylene stimulus","synonyms":[{"name":"detection of ethene stimulus","type":"exact"},{"name":"perception of ethene stimulus","type":"related"},{"name":"perception of ethylene stimulus","type":"related"}],"termid":"GO:0009727"}


id: PBO:0084981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH diphosphatase (pyrophosphatase); hydrolyzes the pyrophosphate linkage in NADH and related nucleotides; localizes to peroxisomes; enzymatic component of one of several partly redundant surveillance pathways involved in decapping of non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear NAD-RNAs; also possesses deCoAping activity involved in the decapping of non-canonical dephospho-CoA capped RNA (dpCoA-RNA); nudix hydrolase family member","termid":"PBO:0084981"}


id: FYPO:0005264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of dithiothreitol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to dithiothreitol","synonyms":[{"name":"resistance to 1,4-dithiothreitol","type":"exact"},{"name":"resistance to dithiothreitol during mitotic cell cycle","type":"related"},{"name":"resistance to dithiothreitol during vegetative growth","type":"exact"},{"name":"resistant to DTT","type":"exact"},{"name":"resistant to dithiothreitol","type":"exact"}],"termid":"FYPO:0005264"}


id: PBO:0046724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 2B","termid":"PBO:0046724"}


id: PBO:0076089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STT3 oligosaccharyltransferase complex catalytic subunit B","termid":"PBO:0076089"}


id: PBO:0039342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALX homeobox 1","termid":"PBO:0039342"}


id: PBO:0043377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 7","termid":"PBO:0043377"}


id: PBO:0072586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 8","termid":"PBO:0072586"}


id: PBO:0073938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member A1","termid":"PBO:0073938"}


id: MONDO:0030423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type 2v","secondary_identifiers":["UMLS:C5561971","OMIM:619493","DOID:0051050","MEDGEN:1794181"],"synonyms":[{"name":"CDG2V","type":"exact"}],"termid":"MONDO:0030423","xrefs":{"Monarch":{"xref_id":"0030423"}}}


id: FYPO:0006196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal and have abnormal orientation. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PMID:11432827","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"misoriented interphase microtubules","termid":"FYPO:0003328"},{"relation_name":"has_part","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"short misoriented interphase microtubules","synonyms":[{"name":"short misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"short misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"short misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006196"}


id: MONDO:0016787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid trophoblastic tumor is an extremely rare gestational trophoblastic tumor (GTT) which generally occurs several years after pregnancy.","definition_xrefs":["Orphanet:254698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid trophoblastic tumor","secondary_identifiers":["UMLS:C1266159","ICDO:9105/3","GARD:20750","MEDGEN:266107","SCTID:609515005","ONCOTREE:ETT","DOID:3593","NCIT:C6900"],"synonyms":[{"name":"ETT","type":"related"},{"name":"epithelioid trophoblastic tumor","type":"exact"}],"termid":"MONDO:0016787","xrefs":{"Monarch":{"xref_id":"0016787"}}}


id: GO:1990026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Synaptic expansion of hippocampal mossy fiber axon that makes contact with the thorny excrescences of hippocampal CA3 pyramidal cell dendrites.","definition_xrefs":["NIF_Subcellular:nlx_subcell_1005002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"},{"relation_name":"part_of","term_name":"hippocampal mossy fiber","termid":"GO:0097457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber expansion","synonyms":[{"name":"dentate gyrus granule cell axonal bouton","type":"related"},{"name":"dentate gyrus mossy fiber expansion","type":"related"},{"name":"mossy fiber expansion","type":"broad"}],"termid":"GO:1990026"}


id: PBO:0072035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 5","termid":"PBO:0072035"}


id: PBO:0046177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK4","termid":"PBO:0046177"}


id: PBO:0055746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA regulator of hepatic lineages 1","termid":"PBO:0055746"}


id: GO:0045607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of auditory hair cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"regulation of inner ear receptor cell differentiation","termid":"GO:2000980"},{"relation_name":"regulates","term_name":"inner ear auditory receptor cell differentiation","termid":"GO:0042491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear auditory receptor cell differentiation","synonyms":[{"name":"regulation of auditory hair cell differentiation","type":"exact"},{"name":"regulation of auditory receptor cell differentiation","type":"related"}],"termid":"GO:0045607"}


id: MONDO:0022682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cennamo gangemi syndrome","synonyms":[{"name":"hydrocephalus cataract microphthalmos","type":"related"}],"termid":"MONDO:0022682","xrefs":{"Monarch":{"xref_id":"0022682"}}}


id: MOD:01044
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00080. Remap to MOD:00080.","definition_xrefs":["DeltaMass:166"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01044 N-methyl glutamyl (obsolete MOD:01044)","termid":"MOD:01044"}


id: PBO:0047646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 3","termid":"PBO:0047646"}


id: PBO:0041979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 22","termid":"PBO:0041979"}


id: PBO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan glucosidase Exg2, unknown specificity","termid":"PBO:0002595"}


id: PBO:0055531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2966","termid":"PBO:0055531"}


id: MONDO:0012265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"preeclampsia","termid":"MONDO:0005081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preeclampsia/eclampsia 3","secondary_identifiers":["MEDGEN:322875","GARD:18391","OMIM:609403","UMLS:C1836256"],"synonyms":[{"name":"PEE3","type":"exact"},{"name":"PREECLAMPSIA/eclampsia 3","type":"related"}],"termid":"MONDO:0012265","xrefs":{"Monarch":{"xref_id":"0012265"}}}


id: PBO:0064051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 85","termid":"PBO:0064051"}


id: GO:0106014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the inflammatory response to wounding.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","PMID:26022821","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of response to wounding","termid":"GO:1903034"},{"relation_name":"regulates","term_name":"inflammatory response to wounding","termid":"GO:0090594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflammatory response to wounding","termid":"GO:0106014"}


id: PBO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase Adh4","termid":"PBO:0000161"}


id: GO:0035662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 4 protein, a pattern recognition receptor that binds bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:18304834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Toll-like receptor 4 binding","synonyms":[{"name":"TLR4 binding","type":"exact"}],"termid":"GO:0035662"}


id: FYPO:0002690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cumene hydroperoxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on cumene hydroperoxide","synonyms":[{"name":"normal cell population growth in presence of cumene hydroperoxide","type":"exact"},{"name":"normal cell population growth on cumene hydroperoxide","type":"exact"},{"name":"normal cellular response to cumene hydroperoxide","type":"related"},{"name":"normal vegetative cell population growth on cumene hydroperoxide","type":"exact"}],"termid":"FYPO:0002690"}


id: MONDO:0003726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast adenosis characterized by the presence of extensive apocrine metaplasia.","definition_xrefs":["NCIT:C5198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proliferative fibrocystic change of the breast","termid":"MONDO:0003724"},{"relation_name":"is_a","term_name":"breast adenosis","termid":"MONDO:0003725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apocrine adenosis of breast","secondary_identifiers":["UMLS:C1332314","DOID:5999","MEDGEN:231072"],"synonyms":[{"name":"apocrine adenosis of breast","type":"exact"},{"name":"apocrine adenosis of the breast","type":"exact"},{"name":"breast apocrine adenosis","type":"exact"}],"termid":"MONDO:0003726","xrefs":{"Monarch":{"xref_id":"0003726"}}}


id: PBO:0046954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM76A pseudogene 1","termid":"PBO:0046954"}


id: MONDO:0007523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome, hypermobility type (HT-EDS) is the most frequent form of EDS, a group of hereditary connective tissue diseases, and is characterized by joint hyperlaxity, mild skin hyperextensibility, tissue fragility and extra-musculoskeletal manifestations.","definition_xrefs":["Orphanet:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, hypermobility type","secondary_identifiers":["NCIT:C125698","MESH:C536196","NANDO:1200647","MEDGEN:75670","DOID:14757","NANDO:2201257","GARD:2081","SCTID:30652003","UMLS:C0268337","OMIM:130020"],"synonyms":[{"name":"EDS 3","type":"related"},{"name":"EDS III","type":"exact"},{"name":"EDS3 (formerly)","type":"related"},{"name":"EDSHMB","type":"exact"},{"name":"Ehlers-Danlos syndrome type 3","type":"exact"},{"name":"Ehlers-Danlos syndrome type 3 (formerly)","type":"exact"},{"name":"Ehlers-Danlos syndrome, hypermobile type","type":"exact"},{"name":"Ehlers-Danlos syndrome, hypermobility type","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 3","type":"exact"},{"name":"Ehlers-Danlos syndrome, type III","type":"exact"},{"name":"HT-EDS","type":"exact"},{"name":"benign hypermobility syndrome","type":"related"},{"name":"hEDS","type":"related"},{"name":"hypermobile EDS","type":"related"},{"name":"hypermobile Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0007523","xrefs":{"Monarch":{"xref_id":"0007523"}}}


id: GO:0008129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity for peptide bonds, with preference for a residue bearing a large hydrophobic side chain at the P2 position. Does not accept Val at P1'.","definition_xrefs":["EC:3.4.22.14"],"gene_count":0,"genotype_count":0,"name":"obsolete actinidain activity (obsolete GO:0008129)","synonyms":[{"name":"actinidain activity","type":"exact"},{"name":"actinidia anionic protease activity","type":"narrow"},{"name":"actinidin activity","type":"related"},{"name":"proteinase A2 of actinidia chinensis","type":"related"}],"termid":"GO:0008129"}


id: MONDO:0021364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neoplasm of oropharynx","secondary_identifiers":["MEDGEN:14519","NCIT:C3291","SCTID:126809003","UMLS:C0029295"],"synonyms":[{"name":"neoplasm of oropharynx","type":"exact"},{"name":"neoplasm of the oropharynx","type":"exact"},{"name":"oropharyngeal neoplasm","type":"exact"},{"name":"oropharyngeal neoplasms","type":"exact"},{"name":"oropharyngeal tumor","type":"exact"},{"name":"oropharyngeal tumour","type":"exact"},{"name":"oropharynx neoplasm","type":"exact"},{"name":"oropharynx neoplasm (disease)","type":"exact"},{"name":"oropharynx tumor","type":"exact"},{"name":"oropharynx tumour","type":"exact"},{"name":"tumor of oropharynx","type":"exact"},{"name":"tumor of the oropharynx","type":"exact"},{"name":"tumour of oropharynx","type":"exact"},{"name":"tumour of the oropharynx","type":"exact"}],"termid":"MONDO:0021364","xrefs":{"Monarch":{"xref_id":"0021364"}}}


id: GO:0045685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glia cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell differentiation","synonyms":[{"name":"regulation of glia cell differentiation","type":"exact"},{"name":"regulation of neuroglia differentiation","type":"exact"}],"termid":"GO:0045685"}


id: GO:0046242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete o-xylene biosynthetic process (obsolete GO:0046242)","synonyms":[{"name":"o-xylene anabolism","type":"exact"},{"name":"o-xylene biosynthesis","type":"exact"},{"name":"o-xylene biosynthetic process","type":"exact"},{"name":"o-xylene formation","type":"exact"},{"name":"o-xylene synthesis","type":"exact"},{"name":"ortho-xylene biosynthesis","type":"exact"},{"name":"ortho-xylene biosynthetic process","type":"exact"}],"termid":"GO:0046242"}


id: PBO:0067199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 263, pseudogene","termid":"PBO:0067199"}


id: MONDO:0009317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A trichothiodystrophy that is non-photosensitive","definition_xrefs":["Wikipedia:Trichothiodystrophy"],"gene_count":0,"genotype_count":0,"name":"obsolete nonphotosensitive trichothiodystrophy (obsolete MONDO:0009317)","secondary_identifiers":["DOID:0111867","Orphanet:1245"],"termid":"MONDO:0009317","xrefs":{"Monarch":{"xref_id":"0009317"}}}


id: GO:0060543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"negatively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"negative regulation of strand invasion","synonyms":[{"name":"negative regulation of D-loop biosynthesis","type":"related"},{"name":"negative regulation of D-loop formation","type":"related"},{"name":"negative regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0060543"}


id: GO:0015839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cadaverine, 1,5-pentanediamine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cadaverine transport","termid":"GO:0015839"}


id: PBO:0091592
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongated at Low PH","termid":"PBO:0091592"}


id: PBO:0079330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 17B","termid":"PBO:0079330"}


id: PBO:0087547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of TFIIIC TauB domain that binds BoxB promoter sites of tRNA and other genes; linker between TauB and TauA domains; human homolog is TFIIIC-90","termid":"PBO:0087547"}


id: GO:0140098
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id: MONDO:0011013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant hypocalcemia in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypocalcemia","termid":"MONDO:0018543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant hypocalcemia 1","secondary_identifiers":["MEDGEN:87438","OMIM:601198","UMLS:C0342345","DOID:0090107"],"synonyms":[{"name":"CASR autosomal dominant hypocalcemia","type":"exact"},{"name":"HYPOC1","type":"exact"},{"name":"autosomal dominant hypocalcemia caused by mutation in CASR","type":"exact"},{"name":"autosomal dominant hypocalcemia type 1","type":"exact"},{"name":"hypercalciuric hypocalcemia","type":"related"},{"name":"hypocalcemia, autosomal dominant","type":"broad"},{"name":"hypocalcemia, autosomal dominant 1","type":"related"},{"name":"hypocalcemia, autosomal dominant 1, with Bartter syndrome","type":"related"},{"name":"hypocalcemia, autosomal dominant type 1","type":"exact"},{"name":"hypocalcemia, autosomal dominant, with Bartter syndrome","type":"exact"},{"name":"hypocalcemia, familial","type":"related"}],"termid":"MONDO:0011013","xrefs":{"Monarch":{"xref_id":"0011013"}}}


