# terms

id: MONDO:0700107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 19q13.11 deletion syndrome in which the distal region was deleted.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 19q13.11 deletion syndrome","termid":"MONDO:0013090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19q13.11 deletion syndrome, distal","secondary_identifiers":["UMLS:C4311048","OMIM:613026","MEDGEN:935015"],"termid":"MONDO:0700107","xrefs":{"Monarch":{"xref_id":"0700107"}}}


id: GO:0060684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epithelial-mesenchymal cell signaling","synonyms":[{"name":"epithelial-mesenchymal cell signalling","type":"exact"}],"termid":"GO:0060684"}


id: GO:0048377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a lateral mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"lateral mesodermal cell fate commitment","termid":"GO:0048372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesodermal cell fate specification","synonyms":[{"name":"lateral mesoderm cell fate specification","type":"exact"},{"name":"lateral plate mesoderm cell fate specification","type":"exact"},{"name":"lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048377"}


id: GO:0002884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002865"},{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"negatively_regulates","term_name":"hypersensitivity","termid":"GO:0002524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hypersensitivity","synonyms":[{"name":"down regulation of hypersensitivity","type":"exact"},{"name":"down-regulation of hypersensitivity","type":"exact"},{"name":"downregulation of hypersensitivity","type":"exact"},{"name":"inhibition of hypersensitivity","type":"narrow"}],"termid":"GO:0002884"}


id: PBO:0066089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASA2 intronic transcript 1","termid":"PBO:0066089"}


id: MONDO:0017770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Robinow-like syndrome is characterized by the association of the clinical features present in Robinow syndrome (short stature, mesomelic brachymelia, macrocephaly, and hypoplastic genitalia), with anterior chamber cleavage anomalies. It has been described in two sisters and is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:3105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Robinow-like syndrome","secondary_identifiers":["SCTID:721905000"],"synonyms":[{"name":"Saal-Greenstein syndrome","type":"exact"}],"termid":"MONDO:0017770","xrefs":{"Monarch":{"xref_id":"0017770"}}}


id: PBO:0004185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta catalytic subunit Cdc6","termid":"PBO:0004185"}


id: PBO:0043007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich hydrophobic domain 2","termid":"PBO:0043007"}


id: GO:0042817
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["PMID:21767669","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridoxal metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal metabolism","type":"exact"}],"termid":"GO:0042817","terms_by_termid":{"GO:0042821":null}}


id: PBO:0072440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 4","termid":"PBO:0072440"}


id: PBO:0048047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 5","termid":"PBO:0048047"}


id: MOD:01338
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-ethyl-L-lysine.","definition_xrefs":["PubMed:9629898","Unimod:280#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"ethylated residue","termid":"MOD:01339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-ethyl-L-lysine","synonyms":[{"name":"Ethyl","type":"related"},{"name":"Ethylation","type":"related"}],"termid":"MOD:01338"}


id: PBO:0084835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein that may have a role in phospholipid metabolism; inner membrane protein with similarity to Mdm32p; required for normal mitochondrial morphology and inheritance; interacts genetically with MMM1, MMM2, MDM10, MDM12, and MDM34","termid":"PBO:0084835"}


id: GO:0032351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving any hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"negatively_regulates","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hormone metabolic process","synonyms":[{"name":"down regulation of hormone metabolic process","type":"exact"},{"name":"down-regulation of hormone metabolic process","type":"exact"},{"name":"downregulation of hormone metabolic process","type":"exact"},{"name":"inhibition of hormone metabolic process","type":"narrow"},{"name":"negative regulation of hormone metabolism","type":"exact"}],"termid":"GO:0032351"}


id: FYPO:0004430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins earlier than normal, e.g. before the mitotic spindle has completely disassembled. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PomBase:mah","PMID:19029336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"premature actomyosin contractile ring contraction","synonyms":[{"name":"advanced actomyosin contractile ring contraction","type":"exact"},{"name":"decreased dwell time before actomyosin contractile ring contraction","type":"exact"},{"name":"premature actomyosin contractile ring constriction","type":"exact"},{"name":"premature actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"premature actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"premature contractile ring contraction","type":"exact"},{"name":"premature cytokinetic contractile ring contraction","type":"exact"},{"name":"premature mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"premature mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0004430"}


id: PBO:0111535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Nrg1","termid":"PBO:0111535"}


id: MONDO:0021498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the placenta.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine benign neoplasm","termid":"MONDO:0000632"},{"relation_name":"is_a","term_name":"placenta neoplasm","termid":"MONDO:0021218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of placenta","secondary_identifiers":["SCTID:92297008","UMLS:C0686274","NCIT:C8545","MEDGEN:146350","EFO:1001443","icd11.foundation:194589255","ICD9:219.8"],"synonyms":[{"name":"benign neoplasm of the placenta","type":"exact"},{"name":"benign placenta neoplasm","type":"exact"},{"name":"benign placenta tumor","type":"exact"},{"name":"benign placenta tumour","type":"exact"},{"name":"benign placental neoplasm","type":"exact"},{"name":"benign placental tumor","type":"exact"},{"name":"benign placental tumour","type":"exact"},{"name":"benign tumor of placenta","type":"exact"},{"name":"benign tumor of the placenta","type":"exact"},{"name":"benign tumour of placenta","type":"exact"},{"name":"benign tumour of the placenta","type":"exact"},{"name":"placenta benign neoplasm","type":"exact"},{"name":"placental neoplasms, benign","type":"exact"}],"termid":"MONDO:0021498","xrefs":{"Monarch":{"xref_id":"0021498"}}}


id: GO:0018699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1,1-trichloroethane + 2 H+ + 2 e- = 1,1-dichloroethane + HCl.","definition_xrefs":["UM-BBD_reactionID:r1007"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,1,1-trichloroethane reductive dehalogenase activity (obsolete GO:0018699)","termid":"GO:0018699"}


id: PBO:0064192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 activating protein","termid":"PBO:0064192"}


id: GO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of a telomeric circle, or t-circle. A t-circle is an extrachromosomal duplex or single-stranded circular DNA molecule composed of t-arrays. T-circles are involved in the control of telomere length via alternative-lengthening of telomeres (ALT) pathway and telomere rapid deletion (TRD).","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","GOC:nc","PMID:19858100","PMID:19581589","PMID:19214183","PMID:19809492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of extrachromosomal circular DNA","termid":"GO:0001325"},{"relation_name":"part_of","term_name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"t-circle formation","synonyms":[{"name":"telomeric circle formation","type":"exact"}],"termid":"GO:0090656"}


id: MONDO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a snail food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete snail allergy (obsolete MONDO:0000805)","secondary_identifiers":["DOID:0060530"],"synonyms":[{"name":"allergy of snail food product","type":"exact"},{"name":"snail food product allergic disease","type":"exact"}],"termid":"MONDO:0000805","xrefs":{"Monarch":{"xref_id":"0000805"}}}


id: GO:0031059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of acetyl groups from histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deacetylation at centromere (obsolete GO:0031059)","termid":"GO:0031059"}


id: GO:1990315
data:
  {"annotated_genes":["SJAG_00318","SJAG_06621","SJAG_00027","SJAG_02135","SJAG_06622","SJAG_03903","SJAG_03828","SJAG_02342","SJAG_04777","SJAG_02945","SJAG_03384"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89480,102859,110896,110897,110898,110899,110900,110901,110902,112327,114473],"is_not":false,"summary":null,"term":"GO:1990315"}]},"cv_name":"cellular_component","definition":"A protein complex that consists of a phospho relay component and a MAPK cascade component. The complex is involved in signaling oxidative stress and osmostress.","definition_xrefs":["PMID:24255738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_02135":null,"SJAG_02342":null,"SJAG_02945":null,"SJAG_03384":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04777":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Mcs4 RR-MAPKKK complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990315","terms_by_termid":{"GO:1990315":null}}


id: MONDO:0011172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otofacioosseous-gonadal syndrome","secondary_identifiers":["MESH:C566597","MEDGEN:356416","UMLS:C1865988","OMIM:601976"],"synonyms":[{"name":"otofacioosseous-gonadal syndrome","type":"exact"}],"termid":"MONDO:0011172","xrefs":{"Monarch":{"xref_id":"0011172"}}}


id: MONDO:1012764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary open angle glaucoma that occurs in dogs due to a mutation in the ADAMTS17 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"primary open angle glaucoma, dog","termid":"MONDO:1012498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open angle glaucoma, ADAMTS17-related, dog","secondary_identifiers":["OMIA:001976-9615"],"termid":"MONDO:1012764","xrefs":{"Monarch":{"xref_id":"1012764"}}}


id: PBO:0079346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 30, pseudogene","termid":"PBO:0079346"}


id: GO:0070641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving vitamin D4, (3S,5Z,7E)-9,10-secoergosta-5,7,10(19)-trien-3-ol.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete vitamin D4 metabolic process (obsolete GO:0070641)","synonyms":[{"name":"vitamin D4 metabolism","type":"exact"}],"termid":"GO:0070641"}


id: GO:0046622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:bf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organ growth","termid":"GO:0046620"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of organ growth","termid":"GO:0046622"}


id: MONDO:0000975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the spermatic cord. This is the most common tumor amongst the benign paratesticular lesions.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign male reproductive system neoplasm","termid":"MONDO:0000625"},{"relation_name":"is_a","term_name":"paratesticular lipoma","termid":"MONDO:0000976"},{"relation_name":"is_a","term_name":"male reproductive system neoplasm","termid":"MONDO:0024582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoma of spermatic cord","secondary_identifiers":["UMLS:C0153972","NCIT:C3606","DOID:10206","MEDGEN:102299","ICD9:214.4","SCTID:93162007"],"synonyms":[{"name":"lipoma of spermatic cord","type":"exact"},{"name":"lipoma of the spermatic cord","type":"exact"},{"name":"spermatic cord lipoma","type":"exact"}],"termid":"MONDO:0000975","xrefs":{"Monarch":{"xref_id":"0000975"}}}


id: PBO:0050040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 8 (pseudogene)","termid":"PBO:0050040"}


id: MONDO:0003448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm with eccrine or apocrine differentiation, arising from the sweat glands. It usually presents as a solitary, well circumscribed, firm nodule in the face and upper trunk. It is characterized by the presence of basaloid cells forming nodules in the dermis. Cases of carcinoma arising from long standing spiradenomas have been reported.","definition_xrefs":["NCIT:C4170"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"apocrine sweat gland neoplasm","termid":"MONDO:0003686"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign spiradenoma","secondary_identifiers":["DOID:5444","SCTID:403938001","ONCOTREE:SPIR","UMLS:C0334347","MEDGEN:90768","ICDO:8403/0"],"synonyms":[{"name":"benign eccrine spiradenoma","type":"narrow"},{"name":"eccrine spiradenoma","type":"narrow"},{"name":"eccrine spiradenoma (morphologic abnormality)","type":"narrow"},{"name":"eccrine spiradenoma of skin","type":"narrow"},{"name":"spiradenoma","type":"exact"},{"name":"spiroma/spiradenoma","type":"related"}],"termid":"MONDO:0003448","xrefs":{"Monarch":{"xref_id":"0003448"}}}


id: PBO:0070203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 128 pseudogene","termid":"PBO:0070203"}


id: PBO:0075976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 2","termid":"PBO:0075976"}


id: MONDO:0005039
data:
  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id: GO:0042194
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id: FYPO:0001075
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id: MONDO:0100122
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id: PR:Q10267
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id: PBO:0025524
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id: MONDO:0016201
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id: PBO:0029333
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id: PBO:0045684
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id: PBO:0012823
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id: MONDO:0000620
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id: PBO:0075017
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id: MONDO:0020213
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id: FYPO:0007790
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id: GO:0015882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which L-ascorbic acid is transported across a lipid bilayer, from one side of a membrane to the other. L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-ascorbic acid transmembrane transport","synonyms":[{"name":"L-ascorbate transport","type":"exact"},{"name":"L-ascorbic acid transport","type":"related"},{"name":"vitamin C transport","type":"exact"}],"termid":"GO:0015882"}


id: GO:1903461
data:
  {"annotated_genes":["SJAG_02199","SJAG_02294","SJAG_04183","SJAG_05232","SJAG_00618","SJAG_00198","SJAG_02690"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74048,94601,97007,102571,102605,103463,106108],"is_not":false,"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"Any DNA replication, Okazaki fragment processing that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication, Okazaki fragment processing","termid":"GO:0033567"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00618":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_04183":null,"SJAG_05232":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"Okazaki fragment processing involved in mitotic DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication, Okazaki fragment processing involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA replication, Okazaki fragment processing involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, Okazaki fragment processing involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, Okazaki fragment processing involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA replication, Okazaki fragment processing involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903461","terms_by_termid":{"GO:1903461":null}}


id: PBO:0067141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 189, pseudogene","termid":"PBO:0067141"}


id: PBO:0056966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 23c","termid":"PBO:0056966"}


id: FYPO:0008082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagy is abnormal. Autophagy is the pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["PMID:35406650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal autophagy","termid":"FYPO:0008082"}


id: PBO:0041104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bassoon presynaptic cytomatrix protein","termid":"PBO:0041104"}


id: PBO:0063154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-apoptotic WT1 regulator pseudogene 2","termid":"PBO:0063154"}


id: GO:0033862
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82299],"is_not":false,"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UMP = ADP + UDP.","definition_xrefs":["EC:2.7.4.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate kinase activity","termid":"GO:0050145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"UMP kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-12002","RHEA:24400"],"synonyms":[{"name":"ATP:UMP phosphotransferase activity","type":"related"},{"name":"PyrH","type":"related"},{"name":"SmbA","type":"related"},{"name":"UMP-kinase activity","type":"related"},{"name":"UMPK","type":"related"},{"name":"uridine monophosphate kinase activity","type":"related"}],"termid":"GO:0033862","terms_by_termid":{"GO:0033862":null}}


id: GO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.","definition_xrefs":["ISBN:3110116251"],"gene_count":0,"genotype_count":0,"name":"obsolete stilbene metabolic process (obsolete GO:0009810)","synonyms":[{"name":"stilbene metabolism","type":"exact"}],"termid":"GO:0009810"}


id: PBO:0087094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L9A; homologous to mammalian ribosomal protein L9 and bacterial L6; RPL9A has a paralog, RPL9B, that arose from a single-locus duplication","termid":"PBO:0087094"}


id: PATO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A thickness which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"thickness","termid":"PATO:0000915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased thickness","synonyms":[{"name":"low thickness","type":"exact"},{"name":"slender","type":"related"},{"name":"thin","type":"related"}],"termid":"PATO:0000592"}


id: MONDO:0020596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"mucinous neoplasm","termid":"MONDO:0024338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mucin-producing carcinoma","secondary_identifiers":["MEDGEN:87225","NCIT:C27825","UMLS:C0334368"],"synonyms":[{"name":"mucin-producing carcinoma","type":"exact"}],"termid":"MONDO:0020596","xrefs":{"Monarch":{"xref_id":"0020596"}}}


id: FYPO:0001754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize lysine or methionine, and therefore requires lysine and methionine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for lysine","termid":"FYPO:0000039"},{"relation_name":"is_a","term_name":"growth auxotrophic for methionine","termid":"FYPO:0000040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for lysine and methionine","synonyms":[{"name":"growth auxotrophic for lysine and methionine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for lysine and methionine during vegetative growth","type":"exact"},{"name":"lysine and methionine auxotrophy","type":"exact"}],"termid":"FYPO:0001754"}


id: PBO:0078027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 17","termid":"PBO:0078027"}


id: GO:0060408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"}


id: PBO:0075720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin pseudogene 1","termid":"PBO:0075720"}


id: GO:0034451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; centriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome.","definition_xrefs":["PMID:10579718","PMID:12403812","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"centriolar satellite","termid":"GO:0034451"}


id: PBO:0036217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036217"}


id: PBO:0054572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1974","termid":"PBO:0054572"}


id: PBO:0086979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the type I protein phosphatase (PP1) Glc7p; Glc7p participates in the regulation of a variety of metabolic processes including mitosis and glycogen metabolism; in vitro evidence suggests Ypi1p is an inhibitor of Glc7p while in vivo evidence suggests it is an activator; overproduction causes decreased cellular content of glycogen; partial depletion causes lithium sensitivity, while overproduction confers lithium-tolerance","termid":"PBO:0086979"}


id: GO:0030450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the classical pathway of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002923"},{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"regulates","term_name":"complement activation, classical pathway","termid":"GO:0006958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement activation, classical pathway","synonyms":[{"name":"regulation of complement cascade, classical pathway","type":"exact"}],"termid":"GO:0030450"}


id: PBO:0039212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C3","termid":"PBO:0039212"}


id: MONDO:0009650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucolipidosis II (MLII) is a slowly progressive lysosomal disorder characterized by growth retardation, skeletal abnormalities, facial dysmorphism, stiff skin, developmental delay and cardiomegaly.","definition_xrefs":["Orphanet:576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GNPTAB-mucolipidosis","termid":"MONDO:0100122"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"mucolipidosis type II","secondary_identifiers":["DOID:0080070","NANDO:1200124","GARD:6749","MEDGEN:435914","OMIM:252500","MESH:C538602","SCTID:70199000","NORD:1279","UMLS:C2673377","NCIT:C61270","NANDO:2200567"],"synonyms":[{"name":"GNPTA","type":"related"},{"name":"I Cell Disease","type":"exact"},{"name":"I cell disease","type":"related"},{"name":"I-cell disease","type":"exact"},{"name":"Leroy disease","type":"related"},{"name":"ML 2","type":"related"},{"name":"ML 2 Alpha/Beta","type":"related"},{"name":"ML disorder type 2","type":"related"},{"name":"N-acetylglucosamine 1-phosphotransferase deficiency","type":"exact"},{"name":"N-acetylglucosamine 1phosphotransferase deficiency","type":"related"},{"name":"inclusion cell disease","type":"related"},{"name":"mucolipidosis 2","type":"related"},{"name":"mucolipidosis 2 alpha/beta","type":"related"},{"name":"mucolipidosis II","type":"exact"},{"name":"mucolipidosis II alpha/beta","type":"related"},{"name":"mucolipidosis type II","type":"exact"},{"name":"mucolipidosis type II alpha/beta","type":"exact"}],"termid":"MONDO:0009650","xrefs":{"Monarch":{"xref_id":"0009650"}}}


id: MONDO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oligodendroglioma (obsolete MONDO:0002539)","termid":"MONDO:0002539","xrefs":{"Monarch":{"xref_id":"0002539"}}}


id: MONDO:0011877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant osteopetrosis type I (ADO I) is a sclerosing bone disorder characterized by skeletal densification that predominantly involves the cranial vault.","definition_xrefs":["Orphanet:2783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant osteopetrosis","termid":"MONDO:0020645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant osteopetrosis 1","secondary_identifiers":["OMIM:607634","UMLS:C1843330","DOID:0110937","MEDGEN:335932","GARD:4151","MESH:C536056"],"synonyms":[{"name":"LRP5 osteopetrosis (disease)","type":"exact"},{"name":"OPTA1","type":"exact"},{"name":"autosomal dominant osteopetrosis type 1","type":"exact"},{"name":"osteopetrosis (disease) caused by mutation in LRP5","type":"exact"},{"name":"osteopetrosis autosomal dominant type 1","type":"related"},{"name":"osteopetrosis, autosomal dominant 1","type":"related"},{"name":"osteopetrosis, autosomal dominant type 1","type":"exact"},{"name":"osteopetrosis, autosomal dominant, type 1","type":"related"}],"termid":"MONDO:0011877","xrefs":{"Monarch":{"xref_id":"0011877"}}}


id: PBO:0013105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing factor","termid":"PBO:0013105"}


id: GO:1901122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bacitracin A.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacitracin A metabolic process","synonyms":[{"name":"bacitracin A metabolism","type":"exact"}],"termid":"GO:1901122"}


id: MONDO:1011256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any achromatopsia that occurs in dogs due to a mutation in the CNGB3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"achromatopsia, non-human animal","termid":"MONDO:1012578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achromatopsia, CNGB3-related, dog","secondary_identifiers":["OMIA:001365-9615"],"synonyms":[{"name":"achromatopsia-3 CNGB3-related, dog","type":"related"},{"name":"canine day blindness","type":"broad"}],"termid":"MONDO:1011256","xrefs":{"Monarch":{"xref_id":"1011256"}}}


id: GO:0051839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation by host of cytolysis of symbiont cells (obsolete GO:0051839)","termid":"GO:0051839"}


id: PBO:0055855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 3","termid":"PBO:0055855"}


id: GO:1904143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of carotenoid biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:25675505","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of carotenoid biosynthetic process","synonyms":[{"name":"activation of carotenoid anabolism","type":"narrow"},{"name":"activation of carotenoid biosynthesis","type":"narrow"},{"name":"activation of carotenoid biosynthetic process","type":"narrow"},{"name":"activation of carotenoid formation","type":"narrow"},{"name":"activation of carotenoid synthesis","type":"narrow"},{"name":"positive regulation of carotenoid anabolism","type":"exact"},{"name":"positive regulation of carotenoid biosynthesis","type":"exact"},{"name":"positive regulation of carotenoid formation","type":"exact"},{"name":"positive regulation of carotenoid synthesis","type":"exact"},{"name":"up regulation of carotenoid anabolism","type":"exact"},{"name":"up regulation of carotenoid biosynthesis","type":"exact"},{"name":"up regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up regulation of carotenoid formation","type":"exact"},{"name":"up regulation of carotenoid synthesis","type":"exact"},{"name":"up-regulation of carotenoid anabolism","type":"exact"},{"name":"up-regulation of carotenoid biosynthesis","type":"exact"},{"name":"up-regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up-regulation of carotenoid formation","type":"exact"},{"name":"up-regulation of carotenoid synthesis","type":"exact"},{"name":"upregulation of carotenoid anabolism","type":"exact"},{"name":"upregulation of carotenoid biosynthesis","type":"exact"},{"name":"upregulation of carotenoid biosynthetic process","type":"exact"},{"name":"upregulation of carotenoid formation","type":"exact"},{"name":"upregulation of carotenoid synthesis","type":"exact"}],"termid":"GO:1904143"}


id: GO:0008802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: betaine aldehyde + NAD+ + H2O = betaine + NADH + H+.","definition_xrefs":["EC:1.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"betaine-aldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-6797955","RHEA:15305","MetaCyc:BADH-RXN"],"synonyms":[{"name":"BADH activity","type":"related"},{"name":"BetB","type":"related"},{"name":"betaine aldehyde dehydrogenase activity","type":"related"},{"name":"betaine aldehyde oxidase activity","type":"related"},{"name":"betaine-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0008802"}


id: PATO:0000758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A balance quality inhering in a bearer by virtue of the bearer's lacking balance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balance","termid":"PATO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbalanced","termid":"PATO:0000758"}


id: MONDO:0006273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade fibromyxoid sarcoma characterized by the presence of prominent collagen rosettes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade fibromyxoid sarcoma","termid":"MONDO:0006272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"low grade fibromyxoid sarcoma with giant collagen rosettes","secondary_identifiers":["MEDGEN:310942","NCIT:C45203","UMLS:C1708749","EFO:1000329"],"synonyms":[{"name":"hyalinizing spindle cell tumor with giant Rosettes","type":"exact"},{"name":"hyalinizing spindle cell tumour with giant Rosettes","type":"exact"}],"termid":"MONDO:0006273","xrefs":{"Monarch":{"xref_id":"0006273"}}}


id: FYPO:0006128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the second meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis II","termid":"FYPO:0003798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of meiosis II","synonyms":[{"name":"normal duration of second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006128"}


id: PBO:0081805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 734, pseudogene","termid":"PBO:0081805"}


id: PBO:0084387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity NH4+ transporter; member of the DHA2 family of drug:H+ anti porters; putative paralog of ATR1; but not required for boron tolerance; non-essential gene","termid":"PBO:0084387"}


id: PBO:0031802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition","termid":"PBO:0031802"}


id: GO:0047556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxyphthalate + H+ = 3,4-dihydroxybenzoate + CO2.","definition_xrefs":["EC:4.1.1.69","RHEA:18601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3,4-dihydroxyphthalate decarboxylase activity","secondary_identifiers":["GO:0034913","MetaCyc:34-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN","KEGG_REACTION:R01634","UM-BBD_reactionID:r1447"],"synonyms":[{"name":"3,4-dihydroxyphthalate 2-decarboxylase activity","type":"exact"},{"name":"3,4-dihydroxyphthalate carboxy-lyase (3,4-dihydroxybenzoate-forming)","type":"related"},{"name":"3,4-dihydroxyphthalate carboxy-lyase activity","type":"related"}],"termid":"GO:0047556"}


id: MONDO:1011013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Giant axonal neuropathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"giant axonal neuropathy, non-human animal","termid":"MONDO:1010241"},{"relation_name":"is_a","term_name":"peripheral neuropathy, dog","termid":"MONDO:1011007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"giant axonal neuropathy, dog","secondary_identifiers":["OMIA:001207-9615"],"termid":"MONDO:1011013","xrefs":{"Monarch":{"xref_id":"1011013"}}}


id: MONDO:0014349
data:
  {"annotated_genes":["SJAG_01791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88318],"is_not":false,"summary":null,"term":"MONDO:0014349"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the CLP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1676575","Orphanet:411493","UMLS:C5190575","DOID:0060279","OMIM:615803","GARD:17680"],"synonyms":[{"name":"CLP1 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"CLP1-related pontocerebellar hypoplasia","type":"exact"},{"name":"PCH10","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in CLP1","type":"exact"},{"name":"pontocerebellar hypoplasia, type 10","type":"related"}],"termid":"MONDO:0014349","terms_by_termid":{"MONDO:0014349":null},"xrefs":{"Monarch":{"xref_id":"0014349"}}}


id: PBO:0120869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEMA3B antisense RNA 1","termid":"PBO:0120869"}


id: PBO:0078216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-9","termid":"PBO:0078216"}


id: MONDO:0007616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibula, recurrent dislocation of head of","secondary_identifiers":["MEDGEN:338206","MESH:C565011","OMIM:135800","UMLS:C1851099"],"synonyms":[{"name":"fibula, recurrent dislocation of head of","type":"exact"}],"termid":"MONDO:0007616","xrefs":{"Monarch":{"xref_id":"0007616"}}}


id: FYPO:0008265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing in at rDNA is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal chromatin silencing at rDNA","termid":"FYPO:0008265"}


id: PR:O60070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A set1/Ash2 histone methyltransferase complex subunit ASH2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03834","PANTHER:PTHR10598:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component ash2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.08c","secondary_identifiers":["UniProtKB:O60070"],"synonyms":[{"name":"COMPASS component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Lid2C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ASH2L","type":"exact"},{"name":"complex proteins associated with set1 protein ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lid2 complex component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60070"}


id: PBO:0067114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 156, pseudogene","termid":"PBO:0067114"}


id: PBO:0083438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR072W; originally identified by fungal homology and RT-PCR","termid":"PBO:0083438"}


id: MONDO:0020520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult pulmonary Langerhans Cell Histiocytosis (PLCH) is a rare histiocytic lung disease characterized by the accumulation of Langerhans and other inflammatory cells in the small airways, resulting in the formation of nodular inflammatory lesions.","definition_xrefs":["Orphanet:99874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis specific to adulthood","termid":"MONDO:0017029"},{"relation_name":"is_a","term_name":"eosinophilic granuloma","termid":"MONDO:0020517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"adult pulmonary Langerhans cell histiocytosis","secondary_identifiers":["UMLS:C3161104","SCTID:328611000119105","ICD10CM:J84.82","icd11.foundation:792398738","MEDGEN:853967","NCIT:C142833"],"synonyms":[{"name":"PLCH","type":"exact"},{"name":"pulmonary Langerhans cell histiocytosis","type":"exact"},{"name":"pulmonary eosinophilic granuloma","type":"exact"},{"name":"pulmonary histiocytosis X","type":"exact"}],"termid":"MONDO:0020520","xrefs":{"Monarch":{"xref_id":"0020520"}}}


id: MONDO:0031439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies","secondary_identifiers":["OMIMPS:617877"],"termid":"MONDO:0031439","xrefs":{"Monarch":{"xref_id":"0031439"}}}


id: MONDO:0100408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(16;21)(q24;q22). (A cytogenetic abnormality that refers to the translocation of the long arm (q24) of chromosome 16 and the long arm (q22) of chromosome 22. It is associated with RUNX1/CBFA2T3 fusions, myelodysplastic syndromes and acute myeloid leukemia.)","definition_xrefs":["NCIT:C168773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(16;21)(q24;q22)","synonyms":[{"name":"AML, t(16;21)(q24;q22)","type":"exact"}],"termid":"MONDO:0100408","xrefs":{"Monarch":{"xref_id":"0100408"}}}


id: FYPO:0002303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and has one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"monoseptate","termid":"FYPO:0001225"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"},{"relation_name":"output_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000004","FYPO:0000631","FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"inviable mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable with septation in the absence of nuclear division","type":"related"},{"name":"inviable with septation independent of mitosis","type":"related"},{"name":"inviable with septation without nuclear division","type":"related"},{"name":"lethal; mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0002303"}


id: PR:Q9UR06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mmf2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.10","synonyms":[{"name":"Spom972h-mmf2","type":"exact"},{"name":"maintenance of mitochondrial function 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR06"}


id: MONDO:0019538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that is caused by stress.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired secondary polycythemia","termid":"MONDO:0016541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Gaisbock syndrome","secondary_identifiers":["DOID:2838","GARD:19104","UMLS:C2242785","NCIT:C27174","icd11.foundation:533704171","MedDRA:10042217","MedDRA:10053885","SCTID:36874002","MEDGEN:745735","Orphanet:90041"],"synonyms":[{"name":"Gaisbock's syndrome","type":"exact"},{"name":"Gaisboeck's syndrome","type":"related"},{"name":"GaisböCK syndrome","type":"related"},{"name":"Pseudopolycythaemia","type":"related"},{"name":"Pseudopolycythemia","type":"related"},{"name":"polycythemia, emotional","type":"exact"},{"name":"stress erythrocytosis","type":"exact"},{"name":"stress polycythemia","type":"exact"}],"termid":"MONDO:0019538","xrefs":{"Monarch":{"xref_id":"0019538"}}}


id: GO:0031229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of nuclear inner membrane (obsolete GO:0031229)","synonyms":[{"name":"intrinsic to nuclear inner membrane","type":"narrow"}],"termid":"GO:0031229"}


id: GO:1900850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pseurotin A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of pseurotin A biosynthetic process","termid":"GO:1900849"},{"relation_name":"negatively_regulates","term_name":"pseurotin A biosynthetic process","termid":"GO:1900790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of pseurotin A biosynthetic process","synonyms":[{"name":"down regulation of pseurotin A biosynthetic process","type":"exact"},{"name":"down-regulation of pseurotin A biosynthetic process","type":"exact"},{"name":"downregulation of pseurotin A biosynthetic process","type":"exact"}],"termid":"GO:1900850"}


id: PBO:0046733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ewing sarcoma associated transcript 1","termid":"PBO:0046733"}


id: MONDO:0022462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by bilateral anophthalmia, esophageal atresia, and cryptorchidism. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:1352427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anophthalmia esophageal atresia cryptorchidism","termid":"MONDO:0022462","xrefs":{"Monarch":{"xref_id":"0022462"}}}


id: FYPO:0007495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is normal (i.e. indistinguishable from wild type). The Mei2 nuclear dot is a nuclear body that contains Mei2, other proteins, and meiRNA, and forms during meiotic prophase in a fixed position in the horsetail nucleus.","definition_xrefs":["PMID:24920274","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to Mei2 nuclear dot","synonyms":[{"name":"normal protein localisation to Mei2 nuclear dot","type":"exact"},{"name":"normal protein localization to meiRNA nuclear dot","type":"related"}],"termid":"FYPO:0007495"}


id: PBO:0045905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 3","termid":"PBO:0045905"}


id: PBO:0071898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 36","termid":"PBO:0071898"}


id: MOD:00154
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-(8alpha-FAD)-L-tyrosine.","definition_xrefs":["DeltaMass:0","PubMed:7391034","RESID:AA0145","Unimod:50#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(8alpha-FAD)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]oxyphenyl)propanoic acid","type":"exact"},{"name":"8alpha-(O4'-tyrosyl)FAD","type":"exact"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES O-8alpha-FAD tyrosine","type":"exact"},{"name":"O-8 alpha-Flavin [FAD])- (of Tyrosine)","type":"exact"},{"name":"O4'-(8alpha-FAD)-L-tyrosine","type":"exact"},{"name":"O8aFADTyr","type":"exact"}],"termid":"MOD:00154"}


id: PBO:0043308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 1 pseudogene 1","termid":"PBO:0043308"}


id: GO:1900268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reverse transcription.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"regulates","term_name":"reverse transcription","termid":"GO:0001171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of reverse transcription","termid":"GO:1900268"}


id: PBO:0108966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1C","termid":"PBO:0108966"}


id: GO:0044772
data:
  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id: MONDO:0011350
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  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87467,87468],"is_not":false,"summary":null,"term":"MONDO:0011350"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYH9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110548","MEDGEN:350942","GARD:9726","OMIM:603622","UMLS:C1863659"],"synonyms":[{"name":"DFNA17","type":"narrow"},{"name":"MYH9 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 17","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 17","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYH9","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 17","type":"narrow"},{"name":"cochleosaccular degeneration","type":"related"},{"name":"deafness, autosomal dominant 17","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 17","type":"narrow"},{"name":"deafness, autosomal dominant type 17","type":"narrow"},{"name":"late-onset progressive hereditary hearing impairment due to cochleosaccular degeneration","type":"related"},{"name":"nonsyndromic hereditary deafness DFNA17","type":"narrow"}],"termid":"MONDO:0011350","terms_by_termid":{"MONDO:0011350":null},"xrefs":{"Monarch":{"xref_id":"0011350"}}}


id: PBO:0026901
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mutation_rate","termid":"PBO:0026901"}


id: GO:0032817
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"regulates","term_name":"natural killer cell proliferation","termid":"GO:0001787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell proliferation","synonyms":[{"name":"regulation of NK cell proliferation","type":"exact"}],"termid":"GO:0032817"}


id: PBO:0053417
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 355","termid":"PBO:0053417"}


id: GO:0043049
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.","definition_xrefs":["GOC:go_curators","PMID:12668634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"otic vesicle formation","termid":"GO:0030916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic placode formation","termid":"GO:0043049"}


id: GO:0070433
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 2 (NOD2) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070425"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070432"},{"relation_name":"negatively_regulates","term_name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"negative regulation of NOD2 signaling pathway","type":"exact"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070433"}


id: PBO:0036498
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein Bcd1 (predicted)","termid":"PBO:0036498"}


id: PBO:0091530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M Twenty-Six binding protein","termid":"PBO:0091530"}


id: GO:0098745
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  {"annotated_genes":["SJAG_05694","SJAG_01746","SJAG_05010"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93273,93501,111868],"is_not":false,"summary":null,"term":"GO:0098745"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of a Dcp1 regulatory subunit and a Dcp2 catalytic subunit that has mRNA cap binding activity and is involved in decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:dos","PMID:22323607","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01746":null,"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA decapping complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dcp1-Dcp2 complex","type":"exact"}],"termid":"GO:0098745","terms_by_termid":{"GO:0098745":null}}


id: FYPO:0003099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is normal (i.e. indistinguishable from wild type). Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization during vegetative growth","termid":"FYPO:0002891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal heterochromatin assembly","synonyms":[{"name":"normal heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly during vegetative growth","type":"exact"},{"name":"normal heterochromatin formation","type":"exact"}],"termid":"FYPO:0003099"}


id: FYPO:0005329
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-free translesion synthesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal error-free translesion synthesis","termid":"FYPO:0005325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"normal error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"normal error-free translesion synthesis across TT(6-4)","type":"exact"},{"name":"normal error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"normal error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005329"}


id: PBO:0064375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase, mitochondrial processing subunit beta","termid":"PBO:0064375"}


id: GO:0010725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of primitive erythrocyte differentiation. Primitive erythrocyte differentiation occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:dph","GOC:add","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"regulates","term_name":"primitive erythrocyte differentiation","termid":"GO:0060319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of primitive erythrocyte differentiation","synonyms":[{"name":"regulation of primitive RBC differentiation","type":"exact"},{"name":"regulation of primitive erythropoeisis","type":"exact"},{"name":"regulation of primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0010725"}


id: GO:0071289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nickel ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nickel cation","termid":"GO:0010045"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nickel ion","synonyms":[{"name":"cellular response to nickel","type":"exact"}],"termid":"GO:0071289"}


id: MONDO:0007154
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87614],"is_not":false,"summary":null,"term":"MONDO:0007154"}]},"cv_name":"mondo","definition":"Cerebral arteriovenous malformation (AVM) is a congenital malformative communication between the veins and the arteries in the brain in the form of a nidus, an anatomical structure composed of dilated and tangled supplying arterioles and drainage veins with no intervening capillary bed, that can be asymptomatic or cause, depending on the location and the size of the AVM, headaches of varying severity, generalized or focal seizures, focalneurological defects (weakness, numbness, speech difficulties, vision loss) or potentially fatal intracranial hemorrhage in case the AVM ruptures.","definition_xrefs":["Orphanet:46724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriovenous hemangioma/malformation","termid":"MONDO:0001256"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"arteriovenous malformations of the brain","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060688","NANDO:2200851","GARD:3020","OMIM:108010","NANDO:2100229","icd11.foundation:153256729","NCIT:C2936","UMLS:C0917804","MEDGEN:214590","MESH:D002538","SCTID:234142008"],"synonyms":[{"name":"Bavm","type":"related"},{"name":"arteriovenous malformation of the brain, somatic","type":"exact"},{"name":"arteriovenous malformations of the brain","type":"exact"},{"name":"cerebral arteriovenous malformation","type":"exact"},{"name":"cerebral arteriovenous malformations","type":"related"},{"name":"intracranial AVM","type":"related"},{"name":"intracranial arteriovenous malformation","type":"exact"},{"name":"intracranial haemorrhage in brain arteriovenous malformations, susceptibility to","type":"related"},{"name":"intracranial haemorrhage in brain cerebrovascular malformations, susceptibility to, somatic mutation","type":"exact"},{"name":"intracranial hemorrhage in brain arteriovenous malformations, susceptibility to","type":"related"},{"name":"intracranial hemorrhage in brain cerebrovascular malformations, susceptibility to, somatic mutation","type":"exact"}],"termid":"MONDO:0007154","terms_by_termid":{"MONDO:0007154":null},"xrefs":{"Monarch":{"xref_id":"0007154"}}}


id: PBO:0040778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bestrophin 4","termid":"PBO:0040778"}


id: GO:0071524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["PMID:17204561","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"pyrrolysine metabolic process","termid":"GO:0071525"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrrolysine biosynthetic process","synonyms":[{"name":"monomethylamine methyltransferase cofactor lysine adduct biosynthetic process","type":"exact"},{"name":"pyrrolysine anabolism","type":"exact"},{"name":"pyrrolysine biosynthesis","type":"exact"},{"name":"pyrrolysine formation","type":"exact"},{"name":"pyrrolysine synthesis","type":"exact"}],"termid":"GO:0071524"}


id: GO:0034700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-allulose 6-phosphate = keto-D-fructose 6-phosphate.","definition_xrefs":["RHEA:28426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"allulose 6-phosphate 3-epimerase activity","secondary_identifiers":["MetaCyc:RXN0-304"],"termid":"GO:0034700"}


id: GO:0097670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Ufo1 in S. cerevisiae (Pof10 in S. pombe).","definition_xrefs":["PMID:14747994","GOC:vw","PMID:15147268","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Ufo1/Pof10 ubiquitin ligase complex","termid":"GO:0097670"}


id: MONDO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the trachea. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of trachea","termid":"MONDO:0021517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trachea leiomyoma","secondary_identifiers":["MEDGEN:237015","SCTID:126703006","NCIT:C6049","UMLS:C1336772","DOID:248"],"synonyms":[{"name":"leiomyoma of the trachea","type":"exact"},{"name":"leiomyoma of trachea","type":"exact"},{"name":"trachea leiomyoma","type":"exact"},{"name":"trachea neoplasm","type":"broad"},{"name":"tracheal leiomyoma","type":"exact"},{"name":"tracheal neoplasm","type":"broad"},{"name":"tracheal tumor","type":"broad"},{"name":"tracheal tumour","type":"broad"}],"termid":"MONDO:0002318","xrefs":{"Monarch":{"xref_id":"0002318"}}}


id: PBO:0060413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 50, NatE catalytic subunit","termid":"PBO:0060413"}


id: PBO:0016959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flocculin Pfl2","termid":"PBO:0016959"}


id: MONDO:0034965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare ophthalmic disorder with cranial nerve involvement (obsolete MONDO:0034965)","secondary_identifiers":["Orphanet:519349"],"termid":"MONDO:0034965","xrefs":{"Monarch":{"xref_id":"0034965"}}}


id: PR:O42659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apc14 gene.","definition_xrefs":["UniProtKB:O42659","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.05c","synonyms":[{"name":"20S cyclosome/APC complex protein apc14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-apc14","type":"exact"},{"name":"overlapping meiotic transcript protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42659"}


id: GO:0042717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer associated with a plasma membrane-derived chromatophore; surrounds chromatophores that form complete vesicles.","definition_xrefs":["GOC:mah","PMID:11867431","GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic membrane","termid":"GO:0034357"},{"relation_name":"part_of","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plasma membrane-derived chromatophore membrane","termid":"GO:0042717"}


id: PBO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vegetative_cell_population_growth","termid":"PBO:0030878"}


id: PBO:0068766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 3, pseudogene","termid":"PBO:0068766"}


id: GO:0044324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription that contributes to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in anterior/posterior axis specification (obsolete GO:0044324)","termid":"GO:0044324"}


id: PBO:0069893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1183, pseudogene","termid":"PBO:0069893"}


id: GO:0009934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem organization.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem structural organization","termid":"GO:0009933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem structural organization","synonyms":[{"name":"regulation of meristem organisation","type":"exact"},{"name":"regulation of meristem organization","type":"broad"}],"termid":"GO:0009934"}


id: PBO:0064011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 45","termid":"PBO:0064011"}


id: PBO:0084317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K48-specific deubiquitinating (DUB) enzyme; MINDY family endo-type deubiquitinase that preferentially cleaves long K48-linked polyubiquitin chains between moieties; diploid deletion strain exhibits high budding index; GFP-fusion protein localizes to the cytoplasm endoplasmic reticulum and cell periphery in high-throughput studies; YPL191C has a paralog, YGL082W, that arose from the whole genome duplication; ortholog of human MINDY2/FAM63B","termid":"PBO:0084317"}


id: PBO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glycerol/ethanol_carbon_source","termid":"PBO:0031765"}


id: GO:0022604
data:
  {"annotated_genes":["SJAG_03637","SJAG_00216","SJAG_04322","SJAG_04522","SJAG_04461","SJAG_00661","SJAG_02536","SJAG_02392","SJAG_00596","SJAG_03486","SJAG_02838","SJAG_01456","SJAG_02022","SJAG_02169","SJAG_00845","SJAG_00514","SJAG_04666","SJAG_00610","SJAG_00236","SJAG_03705","SJAG_04724","SJAG_00333","SJAG_01799","SJAG_03581","SJAG_00028","SJAG_04509","SJAG_00244","SJAG_02222"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91813,96527,97796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[90000,112751,108824,105440,118479,101693,119905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[92671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[109585,118585],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[107321,102138,95690],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[105653],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[117046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[121416,121417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008360"},{"annotations":[106493,120808,115041,96533,93089,97610],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000100"},{"annotations":[89845,108075,94373,104801],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell morphogenesis. Cell morphogenesis is the developmental process in which the shape of a cell is generated and organized.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01456":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"synonyms":[{"name":"negative regulation of cell shape and cell size","type":"related"},{"name":"positive regulation of cell shape and cell size","type":"related"},{"name":"regulation of cell shape and cell size","type":"related"}],"termid":"GO:0022604","terms_by_termid":{"GO:0008360":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061361":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0074170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 36 member 1","termid":"PBO:0074170"}


id: GO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of glucose leads to a decrease in the frequency, rate, or extent of transcription of specific RNA polymerase II-transcribed genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription by glucose","termid":"GO:0045014"},{"relation_name":"is_a","term_name":"negative regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0061987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite repression of transcription from RNA polymerase II promoter by glucose","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter by glucose","type":"narrow"}],"termid":"GO:0000433"}


id: GO:0016649
data:
  {"annotated_genes":["SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004657"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces quinone or similar compound.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70670","EC:1.5.5.-"],"termid":"GO:0016649","terms_by_termid":{"GO:0004657":null}}


id: GO:0022410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral process involved in the cycle from wakefulness through an orderly succession of sleep states and stages that occurs on an approximately 24 hour rhythm.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"},{"relation_name":"part_of","term_name":"circadian sleep/wake cycle","termid":"GO:0042745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle process","termid":"GO:0022410"}


id: MONDO:0016866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 1","secondary_identifiers":["UMLS:C5679647","Orphanet:261766","GARD:20789","MEDGEN:1825957"],"synonyms":[{"name":"partial deletion of chromosome type 1","type":"exact"},{"name":"partial monosomy of chromosome 1","type":"exact"}],"termid":"MONDO:0016866","xrefs":{"Monarch":{"xref_id":"0016866"}}}


id: PATO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with small spots, patches, or specks of hue or degree of saturation differing from that of the background.","definition_xrefs":["merriam-webster.:merriam-webster."],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dappled","synonyms":[{"name":"speckled","type":"related"}],"termid":"PATO:0001535"}


id: MONDO:0859282
data:
  {"annotated_genes":["SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87643],"is_not":false,"summary":null,"term":"MONDO:0859282"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, movement abnormalities, and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774208","OMIM:620023","MEDGEN:1823981"],"termid":"MONDO:0859282","terms_by_termid":{"MONDO:0859282":null},"xrefs":{"Monarch":{"xref_id":"0859282"}}}


id: PBO:0087019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribose-5-phosphate ketol-isomerase; catalyzes the interconversion of ribose 5-phosphate and ribulose 5-phosphate in the pentose phosphate pathway; participates in pyridoxine biosynthesis","termid":"PBO:0087019"}


id: PBO:0087025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L12A; rpl12a rpl12b double mutant exhibits slow growth and slow translation; homologous to mammalian ribosomal protein L12 and bacterial L11; RPL12A has a paralog, RPL12B, that arose from the whole genome duplication","termid":"PBO:0087025"}


id: PBO:0083661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized protein; involved in ER-associated protein degradation (ERAD), ER stress, and homeostasis; interacts with components of ERAD-L and ERAD-C and Cdc48p; derlin-like family member similar to Der1p","termid":"PBO:0083661"}


id: GO:0003762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in chromatin assembly by chaperoning histones on to replicating DNA, but is not a component of the assembled nucleosome when performing its normal biological function.","definition_xrefs":["GOC:jl","PMID:7600578","PMID:9325046"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-specific chaperone activity (obsolete GO:0003762)","synonyms":[{"name":"histone-specific chaperone activity","type":"exact"},{"name":"nucleosome assembly chaperone","type":"exact"}],"termid":"GO:0003762"}


id: PBO:0076042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 39","termid":"PBO:0076042"}


id: MONDO:0011620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal dysplasia, Braun-Tinschert type is characterized by metapyhseal undermodeling with broadening of the long bones and femora with an 'Erlenmeyer flask'' appearance, expansion and bowing of the radii with severe varus deformity and flat exostoses of the long bones at the metadiaphyseal junctions.","definition_xrefs":["Orphanet:85188"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal dysplasia, Braun-Tinschert type","secondary_identifiers":["MESH:C565271","OMIM:605946","UMLS:C1853825","GARD:16738","MEDGEN:381277","SCTID:717221005"],"synonyms":[{"name":"metaphyseal dysplasia, Braun-Tinschert type","type":"exact"}],"termid":"MONDO:0011620","xrefs":{"Monarch":{"xref_id":"0011620"}}}


id: PBO:0053003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit gamma 2","termid":"PBO:0053003"}


id: PBO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate cleavage peptidase Icp55 (predicted)","termid":"PBO:0002589"}


id: FYPO:0006903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of protein measured in a cell is lower than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased total protein level during vegetative growth","termid":"FYPO:0006846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased total protein level during mitotic S phase","synonyms":[{"name":"decreased total protein accumulation during mitotic S phase","type":"related"},{"name":"decreased total protein content during mitotic S phase","type":"exact"},{"name":"decreased total protein level during S phase of mitotic cell cycle","type":"exact"},{"name":"reduced total protein level during mitotic S phase","type":"exact"}],"termid":"FYPO:0006903"}


id: GO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive CD4-positive, alpha-beta T cell acquires the specialized features of an effector, regulatory, or memory T cell as part of an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation involved in immune response","termid":"GO:0002293"},{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","synonyms":[{"name":"CD4-positive, alpha-beta T cell development involved in immune response","type":"related"},{"name":"CD4-positive, alpha-beta T cell differentiation during immune response","type":"related"},{"name":"CD4-positive, alpha-beta T lymphocyte differentiation during immune response","type":"related"},{"name":"CD4-positive, alpha-beta T-cell differentiation during immune response","type":"related"},{"name":"CD4-positive, alpha-beta T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002294"}


id: MONDO:0000569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the endocrine system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of endocrine system","secondary_identifiers":["MEDGEN:575099","UMLS:C0342552","DOID:0060005","SCTID:237822008","ICD9:279.49"],"synonyms":[{"name":"endocrine system autoimmune disease","type":"exact"},{"name":"endocrine system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000569","xrefs":{"Monarch":{"xref_id":"0000569"}}}


id: PBO:0046327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase-phosphatase 1","termid":"PBO:0046327"}


id: MONDO:0013277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SPTAN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 5","secondary_identifiers":["MEDGEN:462081","DOID:0080438","GARD:12949","UMLS:C3150731","OMIM:613477"],"synonyms":[{"name":"DEE5","type":"exact"},{"name":"EIEE5","type":"exact"},{"name":"SPTAN1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 5","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SPTAN1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 5","type":"exact"}],"termid":"MONDO:0013277","xrefs":{"Monarch":{"xref_id":"0013277"}}}


id: MONDO:0958232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 90","secondary_identifiers":["OMIM:620722","UMLS:C5935579","DOID:0070607","MEDGEN:1855139"],"synonyms":[{"name":"deafness, autosomal dominant 90","type":"narrow"}],"termid":"MONDO:0958232","xrefs":{"Monarch":{"xref_id":"0958232"}}}


id: PBO:0036242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex (poly(A)-specific ribonuclease) ubiquitin C-terminal hydrolase subunit Pan2 (predicted)","termid":"PBO:0036242"}


id: PBO:0067375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 477, pseudogene","termid":"PBO:0067375"}


id: PBO:0053781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1031","termid":"PBO:0053781"}


id: MONDO:1060121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma characterized by the presence of focal or extensive transformation of malignant glandular cells to squamous epithelial cells.","definition_xrefs":["NCIT:C4200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenoacanthoma","synonyms":[{"name":"adenoacanthoma","type":"exact"},{"name":"adenocarcinoma with squamous metaplasia","type":"exact"}],"termid":"MONDO:1060121","xrefs":{"Monarch":{"xref_id":"1060121"}}}


id: PR:Q9P6I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C1198.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.01","secondary_identifiers":["UniProtKB:Q9P6I8"],"synonyms":[{"name":"Spom972h-ybdR","type":"exact"}],"termid":"PR:Q9P6I8"}


id: GO:0021707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dph","PMID:15157725","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"glutamatergic neuron differentiation","termid":"GO:1905962"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granule cell differentiation","termid":"GO:0021707"}


id: PR:000085738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at the second and fifth positions of one or more of the C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:11387325"],"direct_ancestors":[{"relation_name":"has_part","term_name":"O-phospho-L-serine","termid":"MOD:00046"},{"relation_name":"is_a","term_name":"rpb1/Phos(CTD-S2,S5,S7)","termid":"PR:000050494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2,S5)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:1","type":"exact"},{"name":"rpb1/Phos(CTD-S2,S5)","type":"exact"}],"termid":"PR:000085738"}


id: PBO:0068893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 135, pseudogene","termid":"PBO:0068893"}


id: MONDO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the supraglottic area of the larynx. The vast majority of cases are squamous cell carcinomas.","definition_xrefs":["NCIT:C3545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"supraglottis neoplasm","termid":"MONDO:0004427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supraglottis cancer","secondary_identifiers":["ICD9:161.1","UMLS:C0153484","SCTID:187842004","ICD10CM:C32.1","MEDGEN:57561","DOID:13476"],"synonyms":[{"name":"Ca larynx - supraglottis","type":"exact"},{"name":"cancer of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of extrinsic larynx","type":"exact"},{"name":"malignant neoplasm of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of supraglottis","type":"exact"},{"name":"malignant neoplasm of the supraglottis","type":"exact"},{"name":"malignant supraglottic neoplasm","type":"exact"},{"name":"malignant supraglottic part of larynx neoplasm","type":"exact"},{"name":"malignant supraglottic tumor","type":"exact"},{"name":"malignant supraglottic tumour","type":"exact"},{"name":"malignant supraglottis neoplasm","type":"exact"},{"name":"malignant supraglottis tumor","type":"exact"},{"name":"malignant supraglottis tumour","type":"exact"},{"name":"malignant tumor of supraglottis","type":"exact"},{"name":"malignant tumor of the supraglottis","type":"exact"},{"name":"malignant tumour of supraglottis","type":"exact"},{"name":"malignant tumour of the supraglottis","type":"exact"},{"name":"supraglottic part of larynx cancer","type":"exact"}],"termid":"MONDO:0001724","xrefs":{"Monarch":{"xref_id":"0001724"}}}


id: FYPO:0006962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UDP-N-acetylglucosamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular UDP-N-acetylglucosamine level","synonyms":[{"name":"increased UDP-N-acetylglucosamine accumulation","type":"related"},{"name":"increased cellular UDP-N-acetyl-alpha-D-glucosamine level","type":"exact"},{"name":"increased cellular UDP-N-acetylglucosamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular UDP-N-acetylglucosamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006962"}


id: PBO:0086037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function found in the ER and vacuole lumen; overexpression of YIL089W affects endocytic protein trafficking","termid":"PBO:0086037"}


id: MONDO:0008833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal-hepatic-pancreatic dysplasia in which the cause of the disease is a mutation in the NPHP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal-hepatic-pancreatic dysplasia","termid":"MONDO:0017417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-hepatic-pancreatic dysplasia 1","secondary_identifiers":["UMLS:C3715199","GARD:18431","MEDGEN:811626","OMIM:208540"],"synonyms":[{"name":"NPHP3 renal-hepatic-pancreatic dysplasia","type":"exact"},{"name":"RHPD1","type":"related"},{"name":"Rhpd","type":"related"},{"name":"renal-hepatic-pancreatic dysplasia 1","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia caused by mutation in NPHP3","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia type 1","type":"exact"}],"termid":"MONDO:0008833","xrefs":{"Monarch":{"xref_id":"0008833"}}}


id: SO:0002119
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A physical quality which inheres to the allele by virtue of the number instances of the allele within a population. This is the relative frequency of the allele at a given locus in a population.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelic_frequency","secondary_identifiers":["wikipedia:Allele_frequency"],"termid":"SO:0002119"}


id: PBO:0043283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member G","termid":"PBO:0043283"}


id: PBO:0073282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 3","termid":"PBO:0073282"}


id: GO:0022834
data:
  {"annotated_genes":["SJAG_02322","SJAG_03895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74925,81714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ligand-gated channel activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0022834","terms_by_termid":{"GO:0005227":null}}


id: GO:0071209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U7 small nuclear RNA (U7 snRNA).","definition_xrefs":["PMID:12975319","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"U7 snRNA binding","termid":"GO:0071209"}


id: PATO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"decreased rate","termid":"PATO:0000911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased frequency","synonyms":[{"name":"infrequent","type":"related"},{"name":"low frequency","type":"exact"}],"termid":"PATO:0000381"}


id: MONDO:0018910
data:
  {"annotated_genes":["SJAG_03960","SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011683"},{"annotations":[87059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014070"}]},"cv_name":"mondo","definition":"Oculocutaneous albinism (OCA) describes a group of inherited disorders of melanin biosynthesis characterized by a generalized reduction in pigmentation of hair, skin and eyes and variable ocular findings including nystagmus, reduced visual acuity and photophobia. Variants include OCA1A (the most severe form), OCA1B, OCA1-minimal pigment (OCA1-MP), OCA1-temperature sensitive (OCA1-TS), OCA2, OCA3, OCA4, OCA5, OCA6 and OCA7.","definition_xrefs":["Orphanet:55"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of melanin metabolism","termid":"MONDO:0018134"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"oculocutaneous albinism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1189424097","UMLS:C0078918","MEDGEN:36250","MESH:D016115","NORD:1522","DOID:0050632","NANDO:1200641","GARD:10958","NCIT:C84941","OMIMPS:203100","ICD9:270.2","NANDO:2200986","SCTID:63844009","ICD10CM:E70.32","NANDO:1200637"],"synonyms":[{"name":"OCA","type":"exact"},{"name":"albinism, oculocutaneous","type":"related"},{"name":"non-syndromic oculocutaneous albinism","type":"exact"},{"name":"nonsyndromic oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0018910","terms_by_termid":{"MONDO:0011683":null,"MONDO:0014070":null},"xrefs":{"Monarch":{"xref_id":"0018910"}}}


id: PATO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being not filed with air.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninflated","termid":"PATO:0002377"}


id: PBO:0083201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene RPC34/YNR003C","termid":"PBO:0083201"}


id: PBO:0078545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM36 intronic transcript 1","termid":"PBO:0078545"}


id: PR:O42971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03073","PRO:DNx","PANTHER:PTHR12936:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.01","secondary_identifiers":["UniProtKB:O42971"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC10","type":"exact"}],"termid":"PR:O42971"}


id: PBO:0046368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 4","termid":"PBO:0046368"}


id: PBO:0066619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIB43A domain with coiled-coils 1","termid":"PBO:0066619"}


id: MONDO:0003829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A controversial term, used for renal papillary lesions which measure 1cm or less in diameter and contain small, regular nuclei.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal adenoma","termid":"MONDO:0002395"},{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"chromophil adenoma of the kidney","secondary_identifiers":["NCIT:C3687","UMLS:C1518879","DOID:6257","MEDGEN:309551"],"synonyms":[{"name":"chromophil adenoma of the kidney","type":"exact"},{"name":"papillary adenoma of the kidney","type":"exact"},{"name":"renal papillary adenoma","type":"exact"}],"termid":"MONDO:0003829","xrefs":{"Monarch":{"xref_id":"0003829"}}}


id: PBO:0072076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 6","termid":"PBO:0072076"}


id: PR:O14076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpp6 gene.","definition_xrefs":["UniProtKB:O14076","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein UNK4.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.11c","synonyms":[{"name":"Spom972h-mpp6","type":"exact"}],"termid":"PR:O14076"}


id: PBO:0057159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302d","termid":"PBO:0057159"}


id: PBO:0030963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation","termid":"PBO:0030963"}


id: PBO:0011166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1/Yta4 (predicted)","termid":"PBO:0011166"}


id: PBO:0058923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIRLET7B host gene","termid":"PBO:0058923"}


id: PBO:0069048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 294, pseudogene","termid":"PBO:0069048"}


id: GO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the semicircular canals are generated and organized.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal morphogenesis","synonyms":[{"name":"embryonic semicircular canal morphogenesis","type":"exact"}],"termid":"GO:0048752"}


id: PATO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that is in the form of a spade.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spade-shaped","termid":"PATO:0002432"}


id: GO:0039501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that results in the inhibition of host cell type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:bf","GOC:sp","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host type I interferon production (obsolete GO:0039501)","synonyms":[{"name":"negative regulation by virus of host type I interferon production","type":"exact"},{"name":"suppression by virus of host interferon type I production","type":"exact"},{"name":"suppression by virus of host type I IFN production","type":"exact"}],"termid":"GO:0039501"}


id: MONDO:0006345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial fibromatosis arising from the soft tissue of the palm. It is characterized by the presence of spindle-shaped fibroblasts, and an infiltrative growth pattern. It predominantly affects adult males.","definition_xrefs":["NCIT:C3469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superficial Fibromatosis","termid":"MONDO:0016037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmar fibromatosis","secondary_identifiers":["MESH:D004387","SCTID:274142002","SCTID:203045001","UMLS:C4085370","HP:0005679","MEDGEN:903450","EFO:1000438"],"synonyms":[{"name":"Dupuytren contracture","type":"exact"},{"name":"Dupuytren contracture (disease)","type":"exact"},{"name":"Dupuytren's contracture","type":"related"},{"name":"palmar fibromatosis","type":"exact"},{"name":"palmar part of manus fibromatosis","type":"exact"}],"termid":"MONDO:0006345","xrefs":{"Monarch":{"xref_id":"0006345"}}}


id: GO:0036015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-3 stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-3","synonyms":[{"name":"response to IL-3","type":"exact"}],"termid":"GO:0036015"}


id: PBO:0079096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 9-1","termid":"PBO:0079096"}


id: PATO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellularity quality inhering in a bearer by virtue of the bearer's consisting of exactly one cell.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularity","termid":"PATO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unicellular","termid":"PATO:0001994"}


id: GO:0033123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of purine nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide catabolic process","termid":"GO:0030813"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide catabolic process","termid":"GO:0033121"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"positively_regulates","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of purine nucleotide catabolic process","synonyms":[{"name":"positive regulation of purine nucleotide breakdown","type":"exact"},{"name":"positive regulation of purine nucleotide catabolism","type":"exact"},{"name":"positive regulation of purine nucleotide degradation","type":"exact"}],"termid":"GO:0033123"}


id: MONDO:0008008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MOMO syndrome is a very rare genetic overgrowth/obesity syndrome characterized by macrocephaly, obesity, mental (intellectual) disability and ocular abnormalities. Other frequent clinical signs include macrosomia, downslanting palpebral fissures, hypertelorism, broad nasal root, high and broad forehead and delay in bone maturation, in association with normal thyroid function and karyotype.","definition_xrefs":["Orphanet:2563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOMO syndrome","secondary_identifiers":["GARD:178","SCTID:724137002","MESH:C535812","OMIM:157980","UMLS:C1834759","MEDGEN:371897"],"synonyms":[{"name":"MOMO syndrome","type":"exact"},{"name":"macrocephaly-obesity-mental disability-ocular abnormalities syndrome","type":"exact"},{"name":"macrocrania, obesity, ocular abnormalities (retinal coloboma and nystagmus)","type":"related"},{"name":"macrosomia, obesity, macrocephaly, and ocular abnormalities","type":"related"},{"name":"macrosomia, obesity, macrocephaly, ocular abnormalities","type":"related"},{"name":"macrosomia-obesity-macrocephaly-ocular abnormalities syndrome","type":"exact"}],"termid":"MONDO:0008008","xrefs":{"Monarch":{"xref_id":"0008008"}}}


id: MONDO:0017296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult glycerol kinase deficiency (GKD) is an uncommon form of GKD diagnosed fortuitously and characterized by pseudohypertriglyceridemia in otherwise healthy adults.","definition_xrefs":["Orphanet:284414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated glycerol kinase deficiency","termid":"MONDO:0018459"},{"relation_name":"is_a","term_name":"disorder of gluconeogenesis","termid":"MONDO:0019225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycerol kinase deficiency, adult form","secondary_identifiers":["GARD:17317","MEDGEN:1842796","UMLS:C5681013"],"termid":"MONDO:0017296","xrefs":{"Monarch":{"xref_id":"0017296"}}}


id: GO:1903065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein localization to cell tip that is involved in positive regulation of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:TermGenie","PMID:24554432","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape (obsolete GO:1903065)","synonyms":[{"name":"protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"}],"termid":"GO:1903065"}


id: PBO:0058299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4673","termid":"PBO:0058299"}


id: PATO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part < n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. This case includes the limit case, where the bearer lacks all parts of the specified type.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks parts or has fewer parts of type","synonyms":[{"name":"loss of","type":"exact"}],"termid":"PATO:0001999"}


id: FYPO:0000068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of K-252a than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to K-252a","synonyms":[{"name":"resistance to K-252a during mitotic cell cycle","type":"related"},{"name":"resistance to K-252a during vegetative growth","type":"exact"},{"name":"resistant to K-252a","type":"exact"}],"termid":"FYPO:0000068"}


id: GO:0031879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 somatostatin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 somatostatin receptor binding","synonyms":[{"name":"type 2 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031879"}


id: PBO:0029547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_degradation_of_DSR-containing_RNA","termid":"PBO:0029547"}


id: PBO:0049938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV-H LTR-associating 2","termid":"PBO:0049938"}


id: PATO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000907 f2 fertile (obsolete PATO:0000907)","termid":"PATO:0000907"}


id: PBO:0086487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ortholog of mammalian ETF-alpha; interacts with frataxin, Yfh1p; null mutant displays elevated frequency of mitochondrial genome loss; may have a role in oxidative stress response; ETF-alpha is an electron transfer flavoprotein complex subunit","termid":"PBO:0086487"}


id: PATO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of whether the bearer has been harmed or injured or spoiled.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage","termid":"PATO:0001020"}


id: GO:0061791
data:
  {"annotated_genes":["SJAG_00031","SJAG_02384","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106619],"is_not":false,"summary":null,"term":"GO:0061791"},{"annotations":[101921,104725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"}]},"cv_name":"molecular_function","definition":"A motor activity driven by GTP hydrolysis.","definition_xrefs":["GOC:vw","PMID:11242086","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"GTPase activity","termid":"GO:0003924"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003924"}],"interesting_parent_ids":["GO:0003774","GO:0003824","GO:0003924","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"GTPase motor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061791","terms_by_termid":{"GO:0061791":null,"GO:1990606":null}}


id: PBO:0059920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 6","termid":"PBO:0059920"}


id: GO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxycytidine in DNA + S-adenosyl-L-methionine = a 5-methyl-2'-deoxycytidine in DNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:13681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"DNA-methyltransferase activity","termid":"GO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0140097","GO:0016741"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity","secondary_identifiers":["MetaCyc:DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN","GO:0008326","EC:2.1.1.37"],"synonyms":[{"name":"DNA 5-cytosine methylase activity","type":"related"},{"name":"DNA cytosine C(5) methylase activity","type":"related"},{"name":"DNA cytosine C5 methylase activity","type":"related"},{"name":"DNA cytosine methylase activity","type":"broad"},{"name":"DNA-cytosine 5-methylase activity","type":"related"},{"name":"DNA-cytosine methyltransferase activity","type":"broad"},{"name":"S-adenosyl-L-methionine:DNA (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"cytosine 5-methyltransferase activity","type":"related"},{"name":"cytosine DNA methylase activity","type":"broad"},{"name":"cytosine DNA methyltransferase activity","type":"broad"},{"name":"cytosine-specific DNA methyltransferase activity","type":"related"},{"name":"deoxyribonucleic (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"deoxyribonucleic acid (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"deoxyribonucleic methylase activity","type":"broad"},{"name":"methylphosphotriester-DNA methyltransferase activity","type":"related"},{"name":"modification methylase activity","type":"related"},{"name":"restriction-modification system activity","type":"related"},{"name":"site-specific DNA-methyltransferase (cytosine-specific) activity","type":"narrow"},{"name":"type II DNA methylase activity","type":"related"}],"termid":"GO:0003886"}


id: PBO:0071832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 27","termid":"PBO:0071832"}


id: PBO:0078437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 3-1","termid":"PBO:0078437"}


id: MONDO:0017902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a partial deficiency in IFN-gammaR2, leading to a residual response to IFN-gamma and consequently to recurrent, moderately severe infections with bacillus Calmette-Guerin (BCG) and other environmental mycobacteria (EM).","definition_xrefs":["Orphanet:319574"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immunodeficiency 28","termid":"MONDO:0013953"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive Mendelian susceptibility to mycobacterial diseases due to partial IFNgammaR2 deficiency","secondary_identifiers":["MEDGEN:1387677","UMLS:C4511098"],"synonyms":[{"name":"IFNGR2 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to partial IFNgammaR2 deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to partial interferon gamma receptor 2 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in IFNGR2","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to partial interferon gamma receptor 2 deficiency","type":"exact"}],"termid":"MONDO:0017902","xrefs":{"Monarch":{"xref_id":"0017902"}}}


id: GO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052219)","synonyms":[{"name":"negative energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052219"}


id: PBO:0083837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; proteasome-interacting protein involved in the assembly of the base subcomplex of the 19S proteasome regulatory particle (RP); null mutants accumulate ubiquitinated Gcn4p and display decreased 26S proteasome stability; interacts with Rpt5p","termid":"PBO:0083837"}


id: GO:0097429
data:
  {"annotated_genes":["SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96053],"is_not":false,"summary":null,"term":"GO:0097429"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of an amino acid to another amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate, carried out by a nonribosomal peptide synthase.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"non-ribosomal peptide synthetase activity","termid":"GO:1904091"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"amino acid ligation activity by nonribosomal peptide synthase","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097429","terms_by_termid":{"GO:0097429":null}}


id: PBO:0077409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 144","termid":"PBO:0077409"}


id: PBO:0082905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cystathionine gamma-lyase; catalyzes one of the two reactions involved in the transsulfuration pathway that yields cysteine from homocysteine with the intermediary formation of cystathionine; protein abundance increases in response to DNA replication stress","termid":"PBO:0082905"}


id: SO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array containing H+ mating type specific information.","definition_xrefs":["PMID:18354497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silent_mating_type_cassette_array","termid":"SO:0001984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mat2P","termid":"SO:0002157"}


id: PBO:0051202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-1","termid":"PBO:0051202"}


id: GO:0039657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts expression of genes in its host. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:1582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host gene expression","synonyms":[{"name":"host gene expression shutoff","type":"exact"},{"name":"host gene expression shutoff by virus","type":"narrow"},{"name":"suppression by virus of host gene expression","type":"narrow"}],"termid":"GO:0039657"}


id: PBO:0058326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4699","termid":"PBO:0058326"}


id: FYPO:0000536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein secretion during vegetative growth","synonyms":[{"name":"abnormal protein secretion during mitotic cell cycle","type":"related"},{"name":"protein secretion: abnormal","type":"related"}],"termid":"FYPO:0000536"}


id: MONDO:0003031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of rare neoplasms that arise from the cervix. It includes low grade endometrioid stromal sarcoma and undifferentiated endocervical sarcoma.","definition_xrefs":["NCIT:C40218"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid stromal and related neoplasms of the cervix","secondary_identifiers":["MEDGEN:927118","DOID:4521","UMLS:C4289586"],"synonyms":[{"name":"cervix endometrial stromal tumor","type":"related"},{"name":"cervix endometrial stromal tumour","type":"related"},{"name":"endometrioid stromal and related neoplasms of the cervix","type":"exact"},{"name":"endometrioid stromal and related tumors of the cervix","type":"exact"},{"name":"endometrioid stromal and related tumours of the cervix","type":"exact"}],"termid":"MONDO:0003031","xrefs":{"Monarch":{"xref_id":"0003031"}}}


id: PBO:0043517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP5 divergent transcript","termid":"PBO:0043517"}


id: GO:0043048
data:
  {"annotated_genes":["SJAG_04231","SJAG_04954","SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82214,99728,101968],"is_not":false,"summary":null,"term":"GO:0043048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichyl diphosphate, a phosphorylated dolichol derivative.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02163":null,"SJAG_04231":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"dolichyl monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dolichyl monophosphate anabolism","type":"exact"},{"name":"dolichyl monophosphate biosynthesis","type":"exact"},{"name":"dolichyl monophosphate formation","type":"exact"},{"name":"dolichyl monophosphate synthesis","type":"exact"}],"termid":"GO:0043048","terms_by_termid":{"GO:0043048":null}}


id: GO:0048146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"positively_regulates","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast proliferation","synonyms":[{"name":"activation of fibroblast proliferation","type":"narrow"},{"name":"stimulation of fibroblast proliferation","type":"narrow"},{"name":"up regulation of fibroblast proliferation","type":"exact"},{"name":"up-regulation of fibroblast proliferation","type":"exact"},{"name":"upregulation of fibroblast proliferation","type":"exact"}],"termid":"GO:0048146"}


id: PBO:0055233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2660","termid":"PBO:0055233"}


id: MONDO:1010938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphosarcoma that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphosarcoma, non-human animal","termid":"MONDO:1010209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphosarcoma, rabbit","secondary_identifiers":["OMIA:000615-9986"],"termid":"MONDO:1010938","xrefs":{"Monarch":{"xref_id":"1010938"}}}


id: GO:1902350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chloroquine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23922869","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to chloroquine","termid":"GO:1902349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chloroquine","termid":"GO:1902350"}


id: PBO:0109457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid N-acetyltransferase","termid":"PBO:0109457"}


id: GO:0141129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters or subverts a host cell surface receptor-mediated signal transduction pathway by binding to and inhibiting the receptor of the pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22714643","PMID:10221874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host signal transduction pathway via antagonism of host cell surface receptor","synonyms":[{"name":"symbiont-mediated perturbation of host signal transduction pathway via antagonism of host cell surface receptor","type":"broad"}],"termid":"GO:0141129"}


id: FYPO:0005138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the repair of double-strand breaks formed as part of meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:15238514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic recombination double-strand break repair","synonyms":[{"name":"normal DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"normal double-strand break repair during meiotic recombination","type":"exact"},{"name":"normal double-strand break repair involved in reciprocal meiotic recombination","type":"exact"}],"termid":"FYPO:0005138"}


id: GO:0047514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->3)-beta-D-glucosyl](n) + phosphate = [(1->3)-beta-D-glucosyl](n-1) + alpha-D-glucose 1-phosphate; substrates include laminarin.","definition_xrefs":["MetaCyc:13-BETA-GLUCAN-PHOSPHORYLASE-RXN","EC:2.4.1.97"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1,3-beta-D-glucan phosphorylase activity","synonyms":[{"name":"1,3-beta-D-glucan:orthophosphate glucosyltransferase activity","type":"related"},{"name":"1,3-beta-D-glucan:phosphate alpha-D-glucosyltransferase activity","type":"related"},{"name":"1,3-beta-glucan phosphorylase activity","type":"exact"},{"name":"laminarin phosphorylase activity","type":"related"},{"name":"laminarin phosphoryltransferase activity","type":"related"}],"termid":"GO:0047514"}


id: PBO:0089779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto1","termid":"PBO:0089779"}


id: MONDO:0006047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the pancreas","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic adenocarcinoma","secondary_identifiers":["NCIT:C8294","MEDGEN:83800","SCTID:700423003","ONCOTREE:PAAD","UMLS:C0281361","EFO:1000044","DOID:4074"],"synonyms":[{"name":"PAAD","type":"related"},{"name":"adenocarcinoma - pancreas","type":"exact"},{"name":"adenocarcinoma of pancreas","type":"exact"},{"name":"adenocarcinoma of the pancreas","type":"exact"},{"name":"pancreas adenocarcinoma","type":"exact"},{"name":"pancreatic adenocarcinoma","type":"exact"}],"termid":"MONDO:0006047","xrefs":{"Monarch":{"xref_id":"0006047"}}}


id: PBO:0057168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320d-2","termid":"PBO:0057168"}


id: GO:0042457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["GOC:jl","ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene metabolic process","termid":"GO:0009692"},{"relation_name":"is_a","term_name":"alkene catabolic process","termid":"GO:0043451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene catabolic process","synonyms":[{"name":"ethene catabolic process","type":"exact"},{"name":"ethene catabolism","type":"exact"},{"name":"ethylene breakdown","type":"exact"},{"name":"ethylene catabolism","type":"exact"},{"name":"ethylene degradation","type":"exact"}],"termid":"GO:0042457"}


id: PR:Q9UST9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC336.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UST9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.05c","synonyms":[{"name":"HEN1 methyltransferase homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC336.05c","type":"exact"}],"termid":"PR:Q9UST9"}


id: FYPO:0008321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation does not occur when cells are subject to nitrogen starvation","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished sporulation","termid":"FYPO:0000583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000121","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abolished sporulation during nitrogen starvation","termid":"FYPO:0008321"}


id: MONDO:0006316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of nervous system tumors which display neuronal differentiation. It includes tumors that are composed of immature round cells and tumors that display advanced differentiation and the formation of ganglion cells.","definition_xrefs":["NCIT:C6963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primitive neuroectodermal tumor","termid":"MONDO:0005462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastic tumor","secondary_identifiers":["EFO:1000393","MEDGEN:233228","UMLS:C1334953"],"synonyms":[{"name":"neuroblastic tumor","type":"exact"}],"termid":"MONDO:0006316","xrefs":{"Monarch":{"xref_id":"0006316"}}}


id: GO:0103084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(4'-methylthio)butylmalate = H+ + 2-oxo-7-methylthioheptanoate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiobutylmalate dehydrogenase activity (obsolete GO:0103084)","termid":"GO:0103084"}


id: PR:O36017
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lip2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octanoyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.05c","synonyms":[{"name":"Spom972h-lip2","type":"exact"},{"name":"lipoate biosynthesis protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoate-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoyl ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoyl/octanoyl transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36017"}


id: PBO:0079727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 3 (pseudogene)","termid":"PBO:0079727"}


id: PBO:0030395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_vegetative_cell","termid":"PBO:0030395"}


id: PBO:0090647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein, Erd1 homolog, required for glycosylation and ER retention Erd1/Gmn2","termid":"PBO:0090647"}


id: PBO:0063560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelota mRNA surveillance and ribosome rescue factor","termid":"PBO:0063560"}


id: MONDO:0009073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ritscher-Schinzel syndrome in which the cause of the disease is a mutation in the WASHC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ritscher-Schinzel syndrome","termid":"MONDO:0019078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome 1","secondary_identifiers":["UMLS:C4551776","OMIM:220210","GARD:15160","DOID:0060571","MEDGEN:1634646"],"synonyms":[{"name":"3C syndrome","type":"related"},{"name":"Craniocerebellocardiac dysplasia","type":"related"},{"name":"Dandy-Walker-like malformation with atrioventricular septal defect","type":"related"},{"name":"RTSC","type":"related"},{"name":"RTSC1","type":"related"},{"name":"Ritscher-Schinzel syndrome","type":"related"},{"name":"Ritscher-Schinzel syndrome 1","type":"exact"},{"name":"Ritscher-Schinzel syndrome caused by mutation in WASHC5","type":"exact"},{"name":"Ritscher-Schinzel syndrome type 1","type":"exact"},{"name":"WASHC5 Ritscher-Schinzel syndrome","type":"exact"}],"termid":"MONDO:0009073","xrefs":{"Monarch":{"xref_id":"0009073"}}}


id: MONDO:0004614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Form of leukemia characterized by an uncontrolled proliferation of the myeloid lineage and their precursors (myeloid progenitor cells) in the bone marrow and other sites.","definition_xrefs":["MESH:D007951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"monocytic leukemia","termid":"MONDO:0004600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"chronic monocytic leukemia","secondary_identifiers":["DOID:8593","SCTID:188745007","MEDGEN:9729","ICD9:206.10","UMLS:C0023466","ICD9:206.11","ICD9:206.1","NCIT:C34774"],"synonyms":[{"name":"monocytic leukemia, chronic","type":"exact"}],"termid":"MONDO:0004614","xrefs":{"Monarch":{"xref_id":"0004614"}}}


id: PBO:0039693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylaminoacyl-peptide hydrolase","termid":"PBO:0039693"}


id: PBO:0091429
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carbohydrate Binding Module","termid":"PBO:0091429"}


id: PBO:0053261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF antisense RNA 2","termid":"PBO:0053261"}


id: PBO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octicosapeptide repeat","termid":"PBO:0001855"}


id: PR:P87140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.10c","secondary_identifiers":["UniProtKB:P87140"],"synonyms":[{"name":"Spom972h-COPG1","type":"exact"},{"name":"gamma-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87140"}


id: PBO:0005505
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.4.1.8","termid":"PBO:0005505"}


id: PBO:0027214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0027214"}


id: SO:0000816
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"rescue","termid":"SO:0000814"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue_gene","synonyms":[{"name":"rescue gene","type":"exact"}],"termid":"SO:0000816"}


id: PBO:0003592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps68 (predicted)","termid":"PBO:0003592"}


id: PBO:0046255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 4","termid":"PBO:0046255"}


id: GO:0004032
data:
  {"annotated_genes":["SJAG_02010","SJAG_01869","SJAG_03958","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76197,93766],"is_not":false,"summary":null,"term":"GO:0004032"},{"annotations":[97702,103142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[97703,103143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+.","definition_xrefs":["EC:1.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01869":null,"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9931850","KEGG_REACTION:R02820","Reactome:R-HSA-196060","RHEA:12789","Reactome:R-HSA-5652172"],"synonyms":[{"name":"aldehyde reductase activity","type":"related"},{"name":"alditol:NADP+ 1-oxidoreductase activity","type":"exact"},{"name":"aldose reductase activity","type":"related"},{"name":"polyol dehydrogenase (NADP(+)) activity","type":"related"}],"termid":"GO:0004032","terms_by_termid":{"GO:0004032":null,"GO:0032866":null,"GO:0032867":null}}


id: PBO:0028870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_poly(A)_tail_length","termid":"PBO:0028870"}


id: PBO:0058999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated A","termid":"PBO:0058999"}


id: GO:0002415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting polymeric IgA and polymeric IgM immunoglobulin, via transcytosis mediated by the polymeric immunoglobulin receptor (pIgR), from the basolateral surface to apical surface of an epithelial cell. At the apical surface the immunoglobulin binding portion of the pIgRis cleaved and remains bound to the transported immunoglobulin as secretory component (SC). The same process is used for the transport and excretion of IgA immune complexes to the luminal surface of the mucosa.","definition_xrefs":["ISBN:0781735149","ISBN:081533642X","PMID:16048543","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin transcytosis in epithelial cells","termid":"GO:0002414"},{"relation_name":"part_of","term_name":"mucosal immune response","termid":"GO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor","synonyms":[{"name":"antibody transcytosis mediated by pIgR","type":"exact"},{"name":"immunoglobulin transcytosis mediated by pIgR","type":"exact"}],"termid":"GO:0002415"}


id: GO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidative deamination of the alpha carbon of an encoded N-terminal amino acid, to form pyruvic acid retaining an amide bond between its 1-carboxyl group and the adjacent residue. The pyruvate 2-oxo group may become an enzyme active site, or it may be reduced to an alcohol.","definition_xrefs":["RESID:AA0128","RESID:AA0129","RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein deamination","termid":"GO:0018277"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination","termid":"GO:0031363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"}


id: GO:0043839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosylmethionine (SAM) to the 1-phosphate group of lipid A.","definition_xrefs":["PMID:15994324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lipid A phosphate methyltransferase activity","synonyms":[{"name":"LmtA","type":"related"},{"name":"lipid A 1-phosphomethyltransferase activity","type":"exact"},{"name":"lipid A methyltransferase","type":"broad"},{"name":"lipid A phosphomethyltransferase activity","type":"exact"}],"termid":"GO:0043839"}


id: PR:Q9UTC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13303:SF0","PRO:DNx","OMA:SCHPO00201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.10","secondary_identifiers":["UniProtKB:Q9UTC9"],"synonyms":[{"name":"Spom972h-PFDN2","type":"exact"}],"termid":"PR:Q9UTC9"}


id: MONDO:0020052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial autosomal trisomy/tetrasomy (obsolete MONDO:0020052)","secondary_identifiers":["Orphanet:98132"],"termid":"MONDO:0020052","xrefs":{"Monarch":{"xref_id":"0020052"}}}


id: GO:0019904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a specific domain of a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein domain specific binding","synonyms":[{"name":"protein domain-specific binding","type":"exact"}],"termid":"GO:0019904"}


id: MONDO:0009244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Freesia Flowers, inability to smell","secondary_identifiers":["MEDGEN:383969","OMIM:229250","UMLS:C1856707"],"synonyms":[{"name":"Freesia Flowers, inability to smell","type":"exact"}],"termid":"MONDO:0009244","xrefs":{"Monarch":{"xref_id":"0009244"}}}


id: FYPO:0002642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amphotericin B. Cells stop growing (and may die) at a concentration of amphotericin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to amphotericin B","synonyms":[{"name":"hypersensitive to amphotericin B","type":"exact"},{"name":"sensitive to amphotericin B during mitotic cell cycle","type":"related"},{"name":"sensitive to amphotericin B during vegetative growth","type":"exact"}],"termid":"FYPO:0002642"}


id: MONDO:0007908
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88610],"is_not":false,"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"Multiple symmetric lipomatosis (MSL) is a rare subcutaneous tissue disease characterized by growth of symmetric non-encapsulated masses of adipose tissue mostly around the face and neck with variable clinical repercussions (e.g. reduced neck mobility, compression of respiratory structures).","definition_xrefs":["Orphanet:2398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"multiple symmetric lipomatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6957","SCTID:238902007","EFO:1000737","MEDGEN:7349","OMIM:151800","NORD:1392","NCIT:C4392","DOID:14116","UMLS:C0023804"],"synonyms":[{"name":"Launois-Bensaude lipomatosis","type":"exact"},{"name":"Launois-Bensaude syndrome","type":"related"},{"name":"Launois-Bensaude's lipomatosis","type":"exact"},{"name":"MSL","type":"related"},{"name":"Madelung disease","type":"broad"},{"name":"Madelung's Disease","type":"exact"},{"name":"Madelung's disease","type":"related"},{"name":"Madelung's neck","type":"exact"},{"name":"benign symmetrical lipomatosis","type":"related"},{"name":"cephalothoracic lipodystrophy","type":"exact"},{"name":"cervical symmetrical lipomatosis","type":"exact"},{"name":"familial benign cervical lipomatosis","type":"exact"},{"name":"familial symmetric lipomatosis","type":"related"},{"name":"lipodystrophy, cephalothoracic","type":"exact"},{"name":"lipomatosis, familial benign cervical","type":"exact"},{"name":"lipomatosis, multiple symmetric","type":"related"},{"name":"multiple symmetric lipomatosis","type":"exact"},{"name":"multiple symmetrical lipomatosis","type":"exact"}],"termid":"MONDO:0007908","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0007908"}}}


id: PBO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation regulator Gcn1 (predicted)","termid":"PBO:0001424"}


id: PBO:0089356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane fluoride export channel","termid":"PBO:0089356"}


id: GO:1901406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole metabolic process","termid":"GO:1901403"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole catabolic process","termid":"GO:1901404"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole catabolic process","synonyms":[{"name":"activation of tetrapyrrole breakdown","type":"exact"},{"name":"activation of tetrapyrrole catabolic process","type":"narrow"},{"name":"activation of tetrapyrrole catabolism","type":"exact"},{"name":"activation of tetrapyrrole degradation","type":"exact"},{"name":"positive regulation of tetrapyrrole breakdown","type":"exact"},{"name":"positive regulation of tetrapyrrole catabolism","type":"exact"},{"name":"positive regulation of tetrapyrrole degradation","type":"exact"},{"name":"up regulation of tetrapyrrole breakdown","type":"exact"},{"name":"up regulation of tetrapyrrole catabolic process","type":"exact"},{"name":"up regulation of tetrapyrrole catabolism","type":"exact"},{"name":"up regulation of tetrapyrrole degradation","type":"exact"},{"name":"up-regulation of tetrapyrrole breakdown","type":"exact"},{"name":"up-regulation of tetrapyrrole catabolic process","type":"exact"},{"name":"up-regulation of tetrapyrrole catabolism","type":"exact"},{"name":"up-regulation of tetrapyrrole degradation","type":"exact"},{"name":"upregulation of tetrapyrrole breakdown","type":"exact"},{"name":"upregulation of tetrapyrrole catabolic process","type":"exact"},{"name":"upregulation of tetrapyrrole catabolism","type":"exact"},{"name":"upregulation of tetrapyrrole degradation","type":"exact"}],"termid":"GO:1901406"}


id: PBO:0062588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 3","termid":"PBO:0062588"}


id: PBO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbol","termid":"PBO:0000040"}


id: GO:0038033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a vascular endothelial growth factor (VEGF) to its receptor on the surface of a cell, which activates or increases the frequency, rate or extent of endothelial cell chemotaxis.","definition_xrefs":["GOC:BHF","PMID:21245381","GOC:bf","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration by vascular endothelial growth factor signaling pathway","termid":"GO:0038089"},{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"},{"relation_name":"is_a","term_name":"positive regulation of endothelial cell chemotaxis","termid":"GO:2001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-VEGFR-induced endothelial cell chemotaxis","type":"exact"},{"name":"VEGF-mediated chemotactic endothelial cell migration","type":"broad"},{"name":"positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of endothelial cell chemotaxis by VEGF/VEGFR signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor receptor signaling pathway involved in endothelial cell chemotaxis","type":"related"}],"termid":"GO:0038033"}


id: FYPO:0006156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium arsenite (AsNaO2). Cells stop growing (and may die) at a concentration of sodium arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to sodium arsenite","synonyms":[{"name":"hypersensitive to sodium arsenite","type":"exact"},{"name":"sensitive to AsNaO2","type":"exact"},{"name":"sensitive to sodium arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium arsenite during vegetative growth","type":"exact"}],"termid":"FYPO:0006156"}


id: CHEBI:23336
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt cation","termid":"CHEBI:23336"}


id: SO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The maximal intersection of exon and UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_region","termid":"SO:0000852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noncoding_region_of_exon","synonyms":[{"name":"noncoding region of exon","type":"exact"}],"termid":"SO:0001214"}


id: PBO:0084386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity methionine permease; similar to Mup1p","termid":"PBO:0084386"}


id: FYPO:0002668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002668"}


id: PBO:0041720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calumenin","termid":"PBO:0041720"}


id: GO:0034258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nicotinamide riboside, which is a pyridine-3-carboxamide covalently bonded to a ribose sugar, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nicotinamide riboside transport","termid":"GO:0034258"}


id: PBO:0041660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 5","termid":"PBO:0041660"}


id: MOD:01349
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:320#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolyzed N-ethylmaleimide adduct","termid":"MOD:00631"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"hydrolyzed N-ethylmaleimide cysteine adduct","synonyms":[{"name":"Nethylmaleimide+water","type":"related"},{"name":"Nethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:01349"}


id: GO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The specific immune response mediated by antibodies. As in, but not restricted to, the taxon Protostomia (Protostomia, ncbi_taxonomy_id:33317).","definition_xrefs":["GOC:jid","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete humoral defense mechanism (sensu Protostomia) (obsolete GO:0016065)","synonyms":[{"name":"humoral defence mechanism (sensu Protostomia)","type":"exact"},{"name":"humoral defense mechanism (sensu Protostomia)","type":"exact"}],"termid":"GO:0016065"}


id: GO:0019342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trypanothione (N1,N6,-bis(glutathionyl)spermidine) in two steps from glutathione and spermidine via an N1- or N8-glutathionylspermidine intermediate. Trypanothione appears to be an essential redox intermediate in intracellular thiol redox regulation. It also plays a role in protecting against oxidative stress.","definition_xrefs":["MetaCyc:TRYPANOSYN-PWY","PMID:9677355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanothione metabolic process","termid":"GO:0046206"},{"relation_name":"is_a","term_name":"glutathione derivative biosynthetic process","termid":"GO:1901687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"trypanothione biosynthetic process","synonyms":[{"name":"trypanothione anabolism","type":"exact"},{"name":"trypanothione biosynthesis","type":"exact"},{"name":"trypanothione formation","type":"exact"},{"name":"trypanothione synthesis","type":"exact"}],"termid":"GO:0019342"}


id: PBO:0044856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin theta 1, pseudogene","termid":"PBO:0044856"}


id: PBO:0084618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metallothionein; binds copper and mediates resistance to high concentrations of copper and cadmium; locus is variably amplified in different strains, with two copies, CUP1-1 and CUP1-2, in the genomic sequence reference strain S288C; CUP1-2 has a paralog, CUP1-1, that arose from a segmental duplication","termid":"PBO:0084618"}


id: PBO:0040472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR interacting protein","termid":"PBO:0040472"}


id: PBO:0030173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_tapered_vegetative_cell","termid":"PBO:0030173"}


id: PBO:0017854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Abc3, unknown specificity","termid":"PBO:0017854"}


id: MONDO:0005462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that originates in the neuroectoderm. The neuroectoderm constitutes the portion of the ectoderm of the early embryo that gives rise to the central and peripheral nervous systems and includes some glial cell precursors.","definition_xrefs":["NCIT:C3716"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","termid":"MONDO:0002510"},{"relation_name":"excluded_subClassOf","term_name":"nervous system cancer","termid":"MONDO:0005872"},{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"},{"relation_name":"is_a","term_name":"neuroepithelial neoplasm","termid":"MONDO:0021193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primitive neuroectodermal tumor","secondary_identifiers":["EFO:0005235","MEDGEN:64627","UMLS:C0206663","ICDO:9503/3","MESH:D017599","DOID:171","ONCOTREE:PNET","ICDO:9473/3"],"synonyms":[{"name":"PNET","type":"exact"},{"name":"neuroectodermal neoplasm","type":"exact"},{"name":"neuroectodermal tumor","type":"exact"},{"name":"neuroectodermal tumour","type":"exact"},{"name":"neuroepithelioma","type":"related"},{"name":"primitive neuroectodermal neoplasm","type":"exact"},{"name":"primitive neuroectodermal tumor","type":"exact"},{"name":"primitive neuroectodermal tumor (PNET)","type":"exact"},{"name":"primitive neuroectodermal tumour (PNET)","type":"exact"}],"termid":"MONDO:0005462","xrefs":{"Monarch":{"xref_id":"0005462"}}}


id: PBO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.37","termid":"PBO:0002297"}


id: FYPO:0006026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles does not occur.","definition_xrefs":["PomBase:mah","PMID:11694585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished actin filament organization","termid":"FYPO:0001010"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle assembly","termid":"FYPO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0004803","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished actin filament bundle assembly","synonyms":[{"name":"abolished actin bundling","type":"exact"},{"name":"abolished actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"abolished actin filament bundle assembly during vegetative growth","type":"exact"},{"name":"abolished actin filament bundle formation","type":"exact"},{"name":"actin bundling abolished","type":"exact"}],"termid":"FYPO:0006026"}


id: PATO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"magnitude","termid":"PATO:0002016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased magnitude","synonyms":[{"name":"low magnitude","type":"exact"}],"termid":"PATO:0002018"}


id: GO:0031550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the brain-derived neurotrophic factor receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031548"},{"relation_name":"positively_regulates","term_name":"brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"activation of brain-derived neurotrophic factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of BDNF receptor signaling pathway","type":"exact"},{"name":"positive regulation of BDNF receptor signalling pathway","type":"exact"},{"name":"positive regulation of brain-derived neurotrophic factor receptor signalling pathway","type":"exact"},{"name":"stimulation of brain-derived neurotrophic factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"upregulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"}],"termid":"GO:0031550"}


id: MONDO:0018727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to a complement regulatory deficiency (obsolete MONDO:0018727)","secondary_identifiers":["Orphanet:459348"],"termid":"MONDO:0018727","xrefs":{"Monarch":{"xref_id":"0018727"}}}


id: PBO:0089176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi tether Uso1","termid":"PBO:0089176"}


id: PBO:0078971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon CGA) 3-1","termid":"PBO:0078971"}


id: PBO:0029729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_1,3-beta-D-glucan_synthase_activity_during_growth_on_papulacandin_B","termid":"PBO:0029729"}


id: GO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging dependent sterility (sensu Fungi) (obsolete GO:0030464)","synonyms":[{"name":"aging dependent sterility (sensu Fungi)","type":"exact"}],"termid":"GO:0030464"}


id: GO:0004100
data:
  {"annotated_genes":["SJAG_00442","SJAG_04868"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76127,76335],"is_not":false,"summary":null,"term":"GO:0004100"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + [->4)-N-acetyl-beta-D-glucosaminyl-(1-](n) = UDP + [->4)-N-acetyl-beta-D-glucosaminyl-(1-](n+1).","definition_xrefs":["EC:2.4.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"chitin synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:16637","MetaCyc:CHITIN-SYNTHASE-RXN"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyl-transferase activity","type":"related"},{"name":"chitin synthetase activity","type":"related"},{"name":"chitin-UDP N-acetylglucosaminyltransferase activity","type":"related"},{"name":"chitin-UDP acetyl-glucosaminyl transferase activity","type":"related"},{"name":"chitin-uridine diphosphate acetylglucosaminyltransferase activity","type":"related"},{"name":"trans-N-acetylglucosaminosylase activity","type":"related"}],"termid":"GO:0004100","terms_by_termid":{"GO:0004100":null}}


id: _global:excluded_subClassOf
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"excluded_subClassOf","termid":"_global:excluded_subClassOf","xrefs":{"Monarch":{"xref_id":"excluded_subClassOf"}}}


id: GO:2001196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:2001194"},{"relation_name":"positively_regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"positive regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"positive regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001196"}


id: FYPO:0007205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at sites within the eukaryotic rDNA repeat spacer is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal replication fork arrest at rDNA repeats","synonyms":[{"name":"normal replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"normal replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"normal replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0007205"}


id: PBO:0048263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 1","termid":"PBO:0048263"}


id: MONDO:1012964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy, non-human animal","termid":"MONDO:1010239"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, non-human animal","termid":"MONDO:1012964","xrefs":{"Monarch":{"xref_id":"1012964"}}}


id: GO:0018233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-cysteine to form a 2'-(S-L-cysteinyl)-L-histidine protein cross-link.","definition_xrefs":["RESID:AA0109"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2'-(S-L-cysteinyl)-L-histidine (obsolete GO:0018233)","termid":"GO:0018233"}


id: GO:0102236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hexen-3-one + NADPH + H+ = hexan-3-one + NADP.","definition_xrefs":["GOC:pz","PMID:21169366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-4-hexen-3-one reductase activity","secondary_identifiers":["MetaCyc:RXN-12296"],"termid":"GO:0102236"}


id: MOD:01962
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine.","definition_xrefs":["PubMed:12186869","RESID:AA0606","PubMed:19236052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-[(2,4-diacetylamino-2,4,6-trideoxy-beta-D-glucopyranosyl)amino]-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (DATDGlc) asparagine","type":"exact"},{"name":"DABA","type":"exact"},{"name":"DATDH","type":"exact"},{"name":"DiNAcBac","type":"exact"},{"name":"N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine","type":"exact"},{"name":"N4-[2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranosyl]-L-asparagine","type":"exact"},{"name":"N4-[N,N-diacetylbacillosaminyl]asparagine","type":"exact"},{"name":"N4-[N2,N4-diacetylbacillosaminyl]asparagine","type":"exact"}],"termid":"MOD:01962"}


id: PBO:0034314
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_bound_by_sequence_of","termid":"PBO:0034314"}


id: PBO:0030414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistant_to_cell_wall_digestion","termid":"PBO:0030414"}


id: GO:0016511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme activity (obsolete GO:0016511)","synonyms":[{"name":"endothelin-converting enzyme activity","type":"exact"}],"termid":"GO:0016511"}


id: GO:1902366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Notch signaling pathway involved in somitogenesis.","definition_xrefs":["PMID:21795391","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"regulates","term_name":"Notch signaling pathway involved in somitogenesis","termid":"GO:1902359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Notch signaling pathway involved in somitogenesis","synonyms":[{"name":"regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:1902366"}


id: PR:P87074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tumor suppressor p53-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","termid":"PR:000029999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Crb2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.05","secondary_identifiers":["UniProtKB:P87074"],"synonyms":[{"name":"DNA repair protein rhp9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TP53BP1","type":"exact"}],"termid":"PR:P87074"}


id: PATO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches freely branching toward the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cladodromous","termid":"PATO:0001971"}


id: PBO:0062983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proton activated chloride channel 1","termid":"PBO:0062983"}


id: PBO:0002588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-tyrosine ligase (predicted)","termid":"PBO:0002588"}


id: PBO:0046690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein regulatory factor 1","termid":"PBO:0046690"}


id: GO:2000590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of metanephros development","termid":"GO:0072217"},{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration","termid":"GO:2000589"},{"relation_name":"negatively_regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"negative regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000590"}


id: MONDO:0975885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypertrophic olivary degeneration","secondary_identifiers":["Orphanet:684290"],"termid":"MONDO:0975885","xrefs":{"Monarch":{"xref_id":"0975885"}}}


id: PBO:0081090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 20","termid":"PBO:0081090"}


id: GO:0035301
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that binds microtubules in a Hedgehog-dependent manner, and is required for signal transduction by members of the Hedgehog family of proteins. The core components of the complex are the serine/threonine protein kinase Fused, the kinesin motor protein Costal2 (Cos2), and a zinc finger transcription factor (Gli family members in humans, and Cubitus interruptus (Ci) in Drosophila).","definition_xrefs":["PMID:10825151","PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Hedgehog signaling complex","synonyms":[{"name":"HSC","type":"exact"},{"name":"Hedgehog signalling complex","type":"exact"}],"termid":"GO:0035301"}


id: MONDO:0700052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess contained between the internal and external anal sphincters.","direct_ancestors":[{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intersphincteric abscess","secondary_identifiers":["ICD10CM:K61.4","UMLS:C0341384","SCTID:235795007","MEDGEN:574358"],"termid":"MONDO:0700052","xrefs":{"Monarch":{"xref_id":"0700052"}}}


id: PATO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000887 relative litter size value (obsolete PATO:0000887)","termid":"PATO:0000887"}


id: MONDO:0007641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Futcher line (obsolete MONDO:0007641)","secondary_identifiers":["OMIM:137000"],"synonyms":[{"name":"Futcher line","type":"exact"},{"name":"Voigt lines","type":"exact"},{"name":"pigmentary demarcation lines","type":"exact"}],"termid":"MONDO:0007641","xrefs":{"Monarch":{"xref_id":"0007641"}}}


id: GO:0007314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the oocyte along its anterior-posterior axis. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:tb","GOC:dph","ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte axis specification","termid":"GO:0007309"},{"relation_name":"is_a","term_name":"anterior/posterior axis specification","termid":"GO:0009948"},{"relation_name":"part_of","term_name":"maternal determination of anterior/posterior axis, embryo","termid":"GO:0008358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte anterior/posterior axis specification","secondary_identifiers":["GO:0048112"],"synonyms":[{"name":"oocyte anterior/posterior axis determination","type":"exact"}],"termid":"GO:0007314"}


id: GO:0102155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-sulfonatolactate + NAD = 3-sulfonatopyruvate(2-) + NADH + H+.","definition_xrefs":["EC:1.1.1.310","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"S-sulfolactate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11689","RHEA:28194"],"termid":"GO:0102155"}


id: MONDO:0019411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Genochondromatosis is characterized by chondromatosis, typically involving the clavicles, upper end of the humerus, and lower end of the femur. Lesions are bilateral and symmetrical. It has been described four patients from the same family and is transmitted as an autosomal dominant trait. Another disorder, genochondromatosis II, shows strong similarities to genochondromatosis but is characterized by the involvement of the short tubular bones and by normal clavicles. It has been described in one unrelated family. Genochondromatosis II may also be inherited as an autosomal dominant trait. Genochondromatosis has a benign clinical course.","definition_xrefs":["Orphanet:85197"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"genochondromatosis","termid":"MONDO:0007653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genochondromatosis type 1","secondary_identifiers":["MEDGEN:1761731","GARD:16741","UMLS:C5438970","icd11.foundation:521879469"],"termid":"MONDO:0019411","xrefs":{"Monarch":{"xref_id":"0019411"}}}


id: GO:0072274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular basement membrane over time, from its formation to the mature structure. The metanephric glomerular basement membrane is the basal laminal portion of the metanephric glomerulus which performs the actual filtration.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular basement membrane development","termid":"GO:0032836"},{"relation_name":"part_of","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular basement membrane development","termid":"GO:0072274"}


id: FYPO:0007167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is normal (i.e. indistinguishable from wild type) during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"normal protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"normal protein localisation to cell cortex during prophase I","type":"exact"}],"termid":"FYPO:0007167"}


id: MONDO:0006601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mild, self-limited skin disorder that is most commonly seen in children and young adults. It is characterized by an initial large round spot on the chest, abdomen, or back, often referred to as a herald patch, that is usually followed within a week by a distinctive pattern of similar but smaller papules on the torso, arms, and legs. There may also be itching, especially when overheated.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"psoriasis","termid":"MONDO:0005083"},{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis rosea","secondary_identifiers":["EFO:1000756","ICD9:696.3","DOID:8892","MESH:D017515","ICD10CM:L42","NCIT:C26855","SCTID:77252004","ICD10WHO:L42","icd11.foundation:919892859","Wikipedia:Pityriasis_rosea","MEDGEN:18492","UMLS:C0032026"],"synonyms":[{"name":"Pityriasis circinata","type":"exact"},{"name":"Pityriasis rosea","type":"exact"}],"termid":"MONDO:0006601","xrefs":{"Monarch":{"xref_id":"0006601"}}}


id: GO:0019422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sulfur compounds with an intermediate oxidation state serve as both electron donors and electron acceptors in an energy-generating redox process. The reaction takes place anaerobically, in light and in the absence of CO2.","definition_xrefs":["MetaCyc:P203-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"disproportionation of elemental sulfur","synonyms":[{"name":"disproportionation of elemental sulphur","type":"exact"}],"termid":"GO:0019422"}


id: PBO:0077189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia homeobox 1","termid":"PBO:0077189"}


id: GO:0002149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hypochlorous acid.","definition_xrefs":["PMID:176150","PMID:10085024","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hypochlorous acid biosynthetic process","synonyms":[{"name":"HClO biosynthetic process","type":"exact"},{"name":"HOCl biosynthetic process","type":"exact"},{"name":"hypochlorite biosynthetic process","type":"related"},{"name":"hypochlorous acid biosynthesis","type":"exact"}],"termid":"GO:0002149"}


id: FYPO:0006610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex is associated with the complex for periods of longer duration than normal.","definition_xrefs":["PMID:29514920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","termid":"FYPO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex","synonyms":[{"name":"increased duration of bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"increased duration of protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"increased duration of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"increased protein dwell time during transient localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006610"}


id: MONDO:0023065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete encephalopathy recurrent of childhood (obsolete MONDO:0023065)","termid":"MONDO:0023065","xrefs":{"Monarch":{"xref_id":"0023065"}}}


id: PATO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male receptivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male receptivity","termid":"PATO:0001721"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased male receptivity","synonyms":[{"name":"low male receptivity","type":"exact"}],"termid":"PATO:0001726"}


id: GO:0048572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a day length that falls short of a particular duration known as the 'critical day length'. The critical day length varies between species. Although the term short-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness exceeds the number of hours defined by 24 hours minus the critical day length.","definition_xrefs":["GOC:pj","ISBN:0582015952","GOC:jid","ISBN:0697037754","ISBN:0709408862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short-day photoperiodism","synonyms":[{"name":"long-night photoperiodism","type":"exact"},{"name":"response to long-night","type":"exact"},{"name":"response to short-day","type":"exact"},{"name":"response to short-day photoperiod","type":"related"}],"termid":"GO:0048572"}


id: GO:0016335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a larval imaginal disc epithelium are generated and organized.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of larval imaginal disc epithelium","termid":"GO:0016335"}


id: GO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycourobilin to phycoerythrins.","definition_xrefs":["RESID:AA0260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"protein-phycourobilin linkage","termid":"GO:0017010"}


id: MONDO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete triple-receptor negative breast cancer (obsolete MONDO:0000619)","termid":"MONDO:0000619","xrefs":{"Monarch":{"xref_id":"0000619"}}}


id: GO:0099572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins within and adjacent to the postsynaptic membrane. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["PMID:22046028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle","termid":"GO:0043226"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization","termid":"GO:0099572"}


id: MONDO:0850082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic bicoronal and metopic craniosynostosis","secondary_identifiers":["MEDGEN:1843005","Orphanet:620198","UMLS:C5680394","GARD:22479"],"termid":"MONDO:0850082","xrefs":{"Monarch":{"xref_id":"0850082"}}}


id: GO:0047312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + L-phenylalanine = phenylpyruvate + L-alanine.","definition_xrefs":["RHEA:13053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-amino-acid transaminase activity","termid":"GO:0008793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"L-phenylalanine-pyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R00692","Reactome:R-HSA-893593","MetaCyc:2.6.1.58-RXN"],"synonyms":[{"name":"L-histidine:pyruvate aminotransferase activity","type":"related"},{"name":"L-phenylalanine(L-histidine):pyruvate aminotransferase activity","type":"broad"},{"name":"L-phenylalanine:pyruvate aminotransferase activity","type":"exact"},{"name":"L-phenylalanine:pyruvate transaminase activity","type":"exact"},{"name":"histidine aminotransferase activity","type":"related"},{"name":"histidine:pyruvate aminotransferase activity","type":"related"},{"name":"phenylalanine (histidine) aminotransferase activity","type":"broad"},{"name":"phenylalanine(histidine) aminotransferase activity","type":"broad"},{"name":"phenylalanine(histidine) transaminase activity","type":"broad"},{"name":"phenylalanine(histidine):pyruvate aminotransferase activity","type":"broad"}],"termid":"GO:0047312"}


id: PBO:0026893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026893"}


id: MONDO:0044237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypercholesterolemia suppressor (obsolete MONDO:0044237)","secondary_identifiers":["OMIM:144020"],"synonyms":[{"name":"hypercholesterolemia suppressor","type":"related"}],"termid":"MONDO:0044237","xrefs":{"Monarch":{"xref_id":"0044237"}}}


id: MONDO:1012716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual development that occurs in horses with a XY karyotype.","definition_xrefs":["OMIA:001601-9796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY difference of sexual development, horse","termid":"MONDO:1012716","xrefs":{"Monarch":{"xref_id":"1012716"}}}


id: MONDO:0017276
data:
  {"annotated_genes":["SJAG_03345","SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[88646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008178"}]},"cv_name":"mondo","definition":"Frontotemporal dementia (FTD) comprises a group of neurodegenerative disorders, characterized by progressive changes in behavior, executive dysfunction and language impairment, as a result of degeneration of the medial prefrontal and frontoinsular cortices. Four clinical subtypes have been identified: semantic dementia, progressive non-fluent aphasia, behavioral variant FTD and right temporal lobar atrophy.","definition_xrefs":["Orphanet:282"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"basal ganglia disorder","termid":"MONDO:0003996"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04489":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"frontotemporal dementia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:83266","NANDO:1200548","UMLS:C0338451","GARD:8436","MedDRA:10068968","ICD10CM:G31.0","DOID:9255","NCIT:C84719","icd11.foundation:831337417","MESH:D057180"],"synonyms":[{"name":"FTD","type":"exact"},{"name":"MSTD","type":"related"},{"name":"Wilhemsen-Lynch disease","type":"exact"},{"name":"frontotemporal lobar degeneration","type":"exact"},{"name":"frontotemporal lobe dementia (FLDEM)","type":"related"},{"name":"multiple system tauopathy with presenile dementia","type":"exact"},{"name":"pallidopontonigral degeneration","type":"exact"}],"termid":"MONDO:0017276","terms_by_termid":{"MONDO:0008178":null,"MONDO:0010936":null},"xrefs":{"Monarch":{"xref_id":"0017276"}}}


id: FYPO:0000978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mevastatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on mevastatin","synonyms":[{"name":"normal cell population growth on compactin","type":"exact"},{"name":"normal cell population growth on mevastatin","type":"exact"},{"name":"normal vegetative cell population growth on mevastatin","type":"exact"}],"termid":"FYPO:0000978"}


id: FYPO:0003784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with a septum and a nucleus in one compartment, and then die.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable septated mononucleate vegetative cell","termid":"FYPO:0002000"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, arrest with single nucleus","termid":"FYPO:0003759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000004","FYPO:0000631"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, arrest with septated mononucleate cell","synonyms":[{"name":"inviable after spore germination, single or double cell division, arrest with septated cell and single nucleus","type":"exact"},{"name":"inviable following spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"}],"termid":"FYPO:0003784"}


id: PR:O13762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C17A2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.12","synonyms":[{"name":"Spom972h-rrp1","type":"exact"}],"termid":"PR:O13762"}


id: PBO:0073171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase","termid":"PBO:0073171"}


id: PBO:0042533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5R2 antisense RNA 1","termid":"PBO:0042533"}


id: MONDO:0044240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Perfect pitch, or absolute pitch (AP), is defined as the ability immediately and effortlessly to name a note or collection of notes when they are sounded. Often, persons with perfect pitch possess a memory capacity whereby they can remember the pitch of a note and the configuration of a group or series of notes after a significant interval of time has elapsed. These recognitive and memory talents involve a potential capacity for performing these functions together with a practice factor which is necessary for the maintenance of the skills at the highest level (summary by {12:Profita and Bidder, 1988}). Absolute pitch likely results from a combination of environmental and genetic factors ({16:Theusch et al., 2009}).","definition_xrefs":["OMIM:159300"],"gene_count":0,"genotype_count":0,"name":"obsolete musical perfect pitch (obsolete MONDO:0044240)","synonyms":[{"name":"absolute pitch","type":"related"},{"name":"musical perfect pitch","type":"related"}],"termid":"MONDO:0044240","xrefs":{"Monarch":{"xref_id":"0044240"}}}


id: PBO:0108975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule associated protein 2","termid":"PBO:0108975"}


id: PBO:0041732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase IV","termid":"PBO:0041732"}


id: GO:0032200
data:
  {"annotated_genes":["SJAG_04372","SJAG_03026","SJAG_06597","SJAG_03624","SJAG_06642","SJAG_02116","SJAG_02563","SJAG_01263","SJAG_01410","SJAG_05173","SJAG_01864","SJAG_04183","SJAG_01068","SJAG_05979","SJAG_05105","SJAG_03843","SJAG_04150","SJAG_02771","SJAG_02194","SJAG_01777","SJAG_03780","SJAG_05372","SJAG_05373","SJAG_03720","SJAG_03855","SJAG_01677","SJAG_01605","SJAG_02079","SJAG_04245","SJAG_04266","SJAG_03092","SJAG_01377","SJAG_02212","SJAG_04863","SJAG_00559","SJAG_01832","SJAG_00640","SJAG_01378","SJAG_05353","SJAG_00364","SJAG_03722","SJAG_04586","SJAG_00939","SJAG_00429","SJAG_02362","SJAG_03685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99132],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032215"},{"annotations":[81735,91715],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031848"},{"annotations":[78937],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[78936,93789,101675,112360,117943,64444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016233"},{"annotations":[73527,111364,118850,107924,114825,111541,59366,80248,110012,106113,93381,113525,101143,91069,72217,72937,80809,81268,73568,102818,109728,118254,65297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000723"},{"annotations":[82098,114938,113726,114942,114939,98134,114941,114940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"},{"annotations":[115822,72564,71531,82103,110094,92584,82166,117945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"},{"annotations":[76012,81733,93791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010833"},{"annotations":[110095,101678,117946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905324"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.","definition_xrefs":["GOC:dph","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00559":null,"SJAG_00640":null,"SJAG_00939":null,"SJAG_01068":null,"SJAG_01263":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01777":null,"SJAG_01832":null,"SJAG_01864":null,"SJAG_02079":null,"SJAG_02116":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03092":null,"SJAG_03624":null,"SJAG_03685":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03855":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04245":null,"SJAG_04266":null,"SJAG_04372":null,"SJAG_04586":null,"SJAG_04863":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telomere organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"chromosome organization, telomeric","type":"exact"},{"name":"organization of chromosome, telomeric region","type":"exact"},{"name":"telomere organisation","type":"exact"},{"name":"telomere organization and biogenesis","type":"related"}],"termid":"GO:0032200","terms_by_termid":{"GO:0000722":null,"GO:0000723":null,"GO:0007004":null,"GO:0010833":null,"GO:0016233":null,"GO:0031848":null,"GO:0032210":null,"GO:0032215":null,"GO:1905324":null}}


id: PBO:0017503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-glutamate O-methyltransferase (predicted)","termid":"PBO:0017503"}


id: GO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in both sexes of species in which the female is the heterogametic sex. Two copies of the Z chromosome are present in each somatic cell of males and one copy is present in females.","definition_xrefs":["ISBN:0321000382","GOC:mr","GOC:mah","PMID:20622855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Z chromosome","secondary_identifiers":["Wikipedia:ZW_sex-determination_system"],"termid":"GO:0000807"}


id: GO:0010774
data:
  {"annotated_genes":["SJAG_03751","SJAG_04950","SJAG_02267"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80707,90432,102508],"is_not":false,"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand invasion","termid":"GO:0000708"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0140013","GO:0007049","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"meiotic strand invasion involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010774","terms_by_termid":{"GO:0010774":null}}


id: MONDO:1030004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare clinical disorder characterized by at least three recurrent episodes of meningitis associated with spontaneous recovery with or without antiviral therapy. Herpes simplex virus type 2 has frequently been implicated in the setting of this illness. RBLM is rare with prevalence rates estimated at 2 per 100,000 persons.","definition_xrefs":["PMID:36304598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral meningitis","termid":"MONDO:0007015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mollaret’s meningitis","synonyms":[{"name":"RBLM","type":"exact"},{"name":"recurrent benign lymphocytic meningitis","type":"exact"}],"termid":"MONDO:1030004","xrefs":{"Monarch":{"xref_id":"1030004"}}}


id: GO:0007004
data:
  {"annotated_genes":["SJAG_00939","SJAG_01378","SJAG_04586","SJAG_04266","SJAG_03855","SJAG_02194","SJAG_01677","SJAG_03685","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71531,72564,82103,82166,92584,110094,115822,117945],"is_not":false,"summary":null,"term":"GO:0007004"},{"annotations":[78937],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"The maintenance of proper telomeric length by the addition of telomeric repeats by telomerase.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-templated DNA biosynthetic process","termid":"GO:0006278"},{"relation_name":"is_a","term_name":"telomere maintenance via telomere lengthening","termid":"GO:0010833"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_03685":null,"SJAG_03855":null,"SJAG_04266":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"telomere maintenance via telomerase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-171319"],"synonyms":[{"name":"telomerase-dependent telomere maintenance","type":"exact"}],"termid":"GO:0007004","terms_by_termid":{"GO:0007004":null,"GO:0032210":null}}


id: FYPO:0003032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to glucose starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during glucose starvation","synonyms":[{"name":"decreased RNA accumulation during glucose starvation","type":"related"},{"name":"decreased RNA level during cellular response to glucose starvation","type":"exact"},{"name":"decreased RNA level during glucose depletion","type":"exact"},{"name":"decreased RNA level during glucose deprivation","type":"exact"},{"name":"decreased RNA level during glucose limitation","type":"related"},{"name":"decreased transcript level during glucose starvation","type":"exact"},{"name":"reduced RNA level during glucose starvation","type":"exact"}],"termid":"FYPO:0003032"}


id: GO:0034281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-isokaurene + diphosphate.","definition_xrefs":["PMID:17141283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ent-isokaurene synthase activity","termid":"GO:0034281"}


id: GO:0160163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + S-nitrosoglutathione = NADP+ + S-(hydroxysulfenamide)glutathione.","definition_xrefs":["RHEA:63500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"S-nitrosoglutathione reductase (NADPH) activity","termid":"GO:0160163"}


id: PATO:0000445
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000445 relative percentage value (obsolete PATO:0000445)","termid":"PATO:0000445"}


id: MONDO:0020230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete renal disease with cataract (obsolete MONDO:0020230)","secondary_identifiers":["Orphanet:98646"],"termid":"MONDO:0020230","xrefs":{"Monarch":{"xref_id":"0020230"}}}


id: GO:0051327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M phase","termid":"GO:0000279"},{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic M phase","synonyms":[{"name":"M phase of meiotic cell cycle","type":"exact"}],"termid":"GO:0051327"}


id: PBO:0053255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 8","termid":"PBO:0053255"}


id: MONDO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anxiety disorder characterized by recurrent excessive distress due to fear of separation from the home or from major attachment figures; the distress is developmentally inappropriate and causes impairment in social, academic, or other areas of functioning.","definition_xrefs":["NCIT:C35014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separation anxiety disorder","secondary_identifiers":["MEDGEN:1999","DOID:10685","EFO:1001916","SCTID:11806006","MESH:D001010","icd11.foundation:830200631","UMLS:C0003477"],"termid":"MONDO:0001098","xrefs":{"Monarch":{"xref_id":"0001098"}}}


id: PBO:0082320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase involved in protein folding and the response to stress; plays a role in SRP-dependent cotranslational protein-membrane targeting and translocation; member of the heat shock protein 70 (HSP70) family; localized to the cytoplasm; SSA3 has a paralog, SSA4, that arose from the whole genome duplication","termid":"PBO:0082320"}


id: FYPO:0009073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0005447","FYPO:0000139","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth on lysine nitrogen source","synonyms":[{"name":"decreased growth on lysine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on lysine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with lysine nitrogen source","type":"related"},{"name":"reduced cell growth on lysine nitrogen source","type":"related"},{"name":"slow cell growth on lysine nitrogen source","type":"narrow"}],"termid":"FYPO:0009073"}


id: PR:O14020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.17c gene.","definition_xrefs":["UniProtKB:O14020","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A4.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.17c","synonyms":[{"name":"Spom972h-SPAC29A4.17c","type":"exact"}],"termid":"PR:O14020"}


id: GO:1902182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a shoot apical meristem over time, from its formation to the mature structure.","definition_xrefs":["PMID:21496644","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot apical meristem development","synonyms":[{"name":"SAM development","type":"exact"},{"name":"primary shoot meristem development","type":"related"},{"name":"promeristem development","type":"broad"}],"termid":"GO:1902182"}


id: PBO:0066316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein, mRNA processing factor 2","termid":"PBO:0066316"}


id: _global:capable_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. ","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"_global:capable_of_part_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of","secondary_identifiers":["RO:0002215"],"termid":"_global:capable_of"}


id: PBO:0084038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored cell wall protein of unknown function; induced in response to cell wall damaging agents and by mutations in genes involved in cell wall biogenesis; sequence similarity to YBR162C/TOS1, a covalently bound cell wall protein; protein abundance increases in response to DNA replication stress","termid":"PBO:0084038"}


id: PBO:0042891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor B","termid":"PBO:0042891"}


id: GO:0032917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of polyamines by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine acetylation","termid":"GO:0032917"}


id: PBO:0064234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C like 1 (inactive)","termid":"PBO:0064234"}


id: RO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relation groups causal relations between material entities and causal relations between processes","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_dependence_to","termid":"RO:0002609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_related_to","termid":"RO:0002410"}


id: PBO:0030035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss_upon_segregation_during_meiotic_cell_cycle","termid":"PBO:0030035"}


id: MONDO:0014474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive limb-girdle muscular dystrophy in which the cause of the disease is a mutation in the ISPD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type C","termid":"MONDO:0000173"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"myopathy caused by variation in CRPPA","termid":"MONDO:0100530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0024322","MONDO:0005066","MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2U","secondary_identifiers":["MEDGEN:1683417","GARD:17519","Orphanet:352479","OMIM:616052","UMLS:C5190987","DOID:0110295"],"synonyms":[{"name":"ISPD autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD2U","type":"exact"},{"name":"MDDGC7","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in ISPD","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy due to ISPD deficiency","type":"exact"},{"name":"muscular dystrophy limb-girdle type 2U","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2U","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle) type C7","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 7","type":"related"}],"termid":"MONDO:0014474","xrefs":{"Monarch":{"xref_id":"0014474"}}}


id: FYPO:0001468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases abnormally, or does not change, following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal steady-state intracellular calcium level following extracellular calcium stimulus","synonyms":[{"name":"abnormal increase in steady-state intracellular calcium level following extracellular calcium stimulus","type":"exact"},{"name":"abnormal increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"},{"name":"abnormal steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001468"}


id: MONDO:0017085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation of the neurenteric canal, spinal cord and column (obsolete MONDO:0017085)","secondary_identifiers":["Orphanet:268843"],"termid":"MONDO:0017085","xrefs":{"Monarch":{"xref_id":"0017085"}}}


id: GO:0050950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of late stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of melanocyte differentiation","termid":"GO:0045636"},{"relation_name":"is_a","term_name":"regulation of late stripe melanocyte differentiation","termid":"GO:0050940"},{"relation_name":"positively_regulates","term_name":"late stripe melanocyte differentiation","termid":"GO:0050934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of late stripe melanocyte differentiation","synonyms":[{"name":"activation of late stripe melanocyte differentiation","type":"narrow"},{"name":"positive regulation of late stripe melanophore differentiation","type":"exact"},{"name":"stimulation of late stripe melanocyte differentiation","type":"narrow"},{"name":"up regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"up-regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"upregulation of late stripe melanocyte differentiation","type":"exact"}],"termid":"GO:0050950"}


id: MONDO:0006077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hyperplasia that involves the adrenal medulla.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal medullary hyperplasia","secondary_identifiers":["EFO:1000076","MEDGEN:231356","NCIT:C35838","Orphanet:688649","UMLS:C1332177"],"synonyms":[{"name":"adrenal medulla hyperplasia","type":"exact"}],"termid":"MONDO:0006077","xrefs":{"Monarch":{"xref_id":"0006077"}}}


id: GO:0044163
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure that forms the internal framework of eukaryotic and prokaryotic host cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular organelle","termid":"GO:0033647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cytoskeleton","termid":"GO:0044163"}


id: GO:1900410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of histone modification.","definition_xrefs":["GOC:TermGenie","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900410)","termid":"GO:1900410"}


id: FYPO:0006149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to idarubicin. Cells stop growing (and may die) at a concentration of idarubicin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to idarubicin","synonyms":[{"name":"hypersensitive to idarubicin","type":"exact"},{"name":"sensitive to idarubicin during mitotic cell cycle","type":"related"},{"name":"sensitive to idarubicin during vegetative growth","type":"exact"}],"termid":"FYPO:0006149"}


id: PBO:0120257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK2 antisense RNA 1","termid":"PBO:0120257"}


id: FYPO:0001485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to oxidative stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"},{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular response to oxidative stress","synonyms":[{"name":"normal cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal oxidative stress response","type":"exact"}],"termid":"FYPO:0001485"}


id: PBO:0050826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxypyruvate isomerase (putative)","termid":"PBO:0050826"}


id: MONDO:0017205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary oculocerebral lymphoma is a rare, primary, organ-specific, extranodal non-Hodgkin's lymphoma (typically diffuse large B-cell lymphoma), simultaneously affecting the intraocular compartments (retina, vitreous, optic nerve, uvea and others) and the central nervous system (commonly the cerebellum, spinal cord or pia mater). The presenting symptoms vary depending on the localization of the tumor and may include vitreous floaters or blurred vision, raised intracranial pressure (headache, vomiting, papilledema) and/or focal neurological deficits.","definition_xrefs":["Orphanet:279897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye lymphoma","termid":"MONDO:0004034"},{"relation_name":"is_a","term_name":"primary organ-specific lymphoma","termid":"MONDO:0017207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"primary oculocerebral lymphoma","secondary_identifiers":["GARD:21062","MEDGEN:1814439","icd11.foundation:446504143","UMLS:C5679779"],"synonyms":[{"name":"primary oculocerebral non-Hodgkin lymphoma","type":"exact"}],"termid":"MONDO:0017205","xrefs":{"Monarch":{"xref_id":"0017205"}}}


id: MONDO:0004880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease in which the causes of the disease is a perturbation of the lower digestive tract leading to its dysfunction.","definition_xrefs":["MONDO:patterns/disease_by_dysfunctional_structure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"bowel dysfunction","secondary_identifiers":["UMLS:C2004461","DOID:9779","SCTID:235594008","ICD9:564.9","MEDGEN:384468"],"synonyms":[{"name":"disease of lower digestive tract","type":"exact"},{"name":"lower digestive tract disease","type":"exact"}],"termid":"MONDO:0004880","xrefs":{"Monarch":{"xref_id":"0004880"}}}


id: GO:0072230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric proximal straight tubule over time, from its formation to the mature structure. The metanephric proximal straight tubule is the part of the metanephric descending limb that extends from the metanephric proximal convoluted tubule to the metanephric descending thin tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal straight tubule development","termid":"GO:0072020"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric proximal tubule development","termid":"GO:0072237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal straight tubule development","synonyms":[{"name":"metanephric S3 development","type":"exact"}],"termid":"GO:0072230"}


id: GO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the association between sister chromatids of a replicated chromosome along the length of the chromosome arms, is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["PMID:1708436","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:0035876)","synonyms":[{"name":"maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:0035876"}


id: RO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x adjacent to y if and only if x and y share a boundary.","direct_ancestors":[{"relation_name":"is_a","term_name":"spatially_disjoint_from","termid":"RO:0002163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adjacent_to","termid":"RO:0002220"}


id: GO:0017195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal lysine of proteins to form the derivative N2-acetyl-L-lysine. The occurrence of this modification has not been confirmed.","definition_xrefs":["RESID:AA0048"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-lysine N2-acetylation (obsolete GO:0017195)","termid":"GO:0017195"}


id: PBO:0113325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII vesicles; proposed to be involved in ER-to-Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p; integral membrane protein that localizes to the ER, the Golgi apparatus, transport vesicles and the peroxisome; two isoforms exist, a full-length Yip3L (Yip3 Long) and a shorter peroxisomal matrix isoform Yip3S (Yip3 Short)","termid":"PBO:0113325"}


id: GO:1905903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm formation.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","PMID:23939491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesoderm formation","termid":"GO:1905902"},{"relation_name":"is_a","term_name":"negative regulation of mesoderm development","termid":"GO:2000381"},{"relation_name":"negatively_regulates","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesoderm formation","synonyms":[{"name":"down regulation of mesoderm formation","type":"exact"},{"name":"down-regulation of mesoderm formation","type":"exact"},{"name":"downregulation of mesoderm formation","type":"exact"},{"name":"inhibition of mesoderm formation","type":"narrow"}],"termid":"GO:1905903"}


id: PBO:0012227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit (predicted)","termid":"PBO:0012227"}


id: MONDO:1012891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hearing loss that occurs in sheep due to a mutation in the OTOF gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder, non-human animal","termid":"MONDO:1012969"},{"relation_name":"is_a","term_name":"inherited auditory system disease, non-human animal","termid":"MONDO:1012970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, OTOF-related, sheep","secondary_identifiers":["OMIA:002413-9940"],"termid":"MONDO:1012891","xrefs":{"Monarch":{"xref_id":"1012891"}}}


id: MONDO:0015514
data:
  {"annotated_genes":["SJAG_00377","SJAG_04703","SJAG_04285","SJAG_03698","SJAG_02294","SJAG_03720","SJAG_04950","SJAG_00103","SJAG_00301","SJAG_02954","SJAG_04148","SJAG_03051","SJAG_02690","SJAG_00321","SJAG_04270","SJAG_04398","SJAG_02829","SJAG_03418","SJAG_03597","SJAG_04738","SJAG_04110","SJAG_02643","SJAG_04114","SJAG_02339"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[87321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[88798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[88794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014455"},{"annotations":[87876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[89194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[88884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032787"},{"annotations":[87807,87806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"},{"annotations":[88934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030886"},{"annotations":[87412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[87121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[88887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[87553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[88316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[89147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[87920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[86959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976232"},{"annotations":[88622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"},{"annotations":[87539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[88334,88333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[87624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[88030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[88950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[88522,88521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00301":null,"SJAG_00321":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02643":null,"SJAG_02690":null,"SJAG_02829":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03597":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04110":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04270":null,"SJAG_04285":null,"SJAG_04398":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary endocrine growth disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D006130","MEDGEN:1842942","Orphanet:156643","GARD:20012","UMLS:C5680637"],"synonyms":[{"name":"genetic endocrine growth disease","type":"exact"},{"name":"growth disorder","type":"exact"}],"termid":"MONDO:0015514","terms_by_termid":{"MONDO:0008840":null,"MONDO:0008980":null,"MONDO:0009258":null,"MONDO:0009514":null,"MONDO:0010350":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0013310":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014455":null,"MONDO:0014497":null,"MONDO:0014843":null,"MONDO:0026763":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0030886":null,"MONDO:0032787":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null,"MONDO:0976232":null},"xrefs":{"Monarch":{"xref_id":"0015514"}}}


id: MONDO:0020652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor of the vulva","termid":"MONDO:0020650"},{"relation_name":"is_a","term_name":"immature teratoma","termid":"MONDO:0024746"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immature teratoma of vulva","secondary_identifiers":["ONCOTREE:VIMT"],"termid":"MONDO:0020652","xrefs":{"Monarch":{"xref_id":"0020652"}}}


id: GO:0052639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylic acid + UDP-glucose = salicylic acid glucose ester + UDP.","definition_xrefs":["RHEA:62316","MetaCyc:RXN-11659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"salicylic acid glucosyltransferase (ester-forming) activity","synonyms":[{"name":"UDP:glucose:2-hydroxybenzoic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:SA glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylate glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"salicylic acid glucosyltransferase activity","type":"broad"}],"termid":"GO:0052639"}


id: PBO:0065144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin receptor","termid":"PBO:0065144"}


id: SO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the resulting polypeptide structure.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3D_polypeptide_structure_variant","synonyms":[{"name":"3D polypeptide structure variant","type":"exact"}],"termid":"SO:0001599"}


id: PBO:0113170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for V-ATPase function; not actual component of vacuolar H+-ATPase (V-ATPase) complex; diverged ortholog of human VMA21/XMEA (X-linked Myopathy with Excessive Autophagy); functions in assembly of V-ATPase; localizes to endoplasmic reticulum (ER)","termid":"PBO:0113170"}


id: GO:1905863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an invadopodium.","definition_xrefs":["GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium organization (obsolete GO:1905863)","termid":"GO:1905863"}


id: MONDO:1012234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency due to GCS deficiency, non-human animal","termid":"MONDO:1011693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency due to GCS deficiency, sheep","secondary_identifiers":["OMIA:000853-9940"],"termid":"MONDO:1012234","xrefs":{"Monarch":{"xref_id":"1012234"}}}


id: PR:O14028
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial N(5)-glutamine methyltransferase mtq1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.05c","synonyms":[{"name":"Spom972h-SPAC29B12.05c","type":"exact"}],"termid":"PR:O14028"}


id: PBO:0067198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 262, pseudogene","termid":"PBO:0067198"}


id: FYPO:0007449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:32735772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"},{"relation_name":"is_a","term_name":"abolished protein localization to endoplasmic reticulum","termid":"FYPO:0008405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localization to ER, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0007449"}


id: PBO:0031384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_population_growth","termid":"PBO:0031384"}


id: PBO:0042217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNO divergent transcript","termid":"PBO:0042217"}


id: MONDO:0100433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome associated with developmental delay, mild intellectual disability, microcephaly, and thrombocytopenia with platelet anisotropy and enlarged platelets.","definition_xrefs":["PMID:30315159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"ACTB-associated syndromic thrombocytopenia","secondary_identifiers":["MEDGEN:1851006","Orphanet:674653","OMIM:620475","UMLS:C5882677"],"synonyms":[{"name":"ACTB-AST","type":"exact"},{"name":"thrombocytopenia 8, with dysmorphic features and developmental delay","type":"exact"}],"termid":"MONDO:0100433","xrefs":{"Monarch":{"xref_id":"0100433"}}}


id: MONDO:0019639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital megacalycosis is a rare renal malformation, characterized by non-obstructive dilation of the renal calyces as well as an increased calyceal number (12-20), with a normal renal pelvis, ureter, and bladder. It may be unilateral or bilateral and is usually asymptomatic unless complicated by nephrolithiasis and urinary tract infection.","definition_xrefs":["Orphanet:93109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital megacalycosis","secondary_identifiers":["SCTID:85901000","UMLS:C5545379","NANDO:2200177","MEDGEN:1782490","GARD:19174","icd11.foundation:954627950","ICD9:753.3"],"termid":"MONDO:0019639","xrefs":{"Monarch":{"xref_id":"0019639"}}}


id: GO:0140144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The non-collagenous compartment of the solid phase in basement membrane ECM, including glycoproteins like laminins or nidogens.","definition_xrefs":["PMID:28324731","PMID:21421915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"solid phase of basement membrane","termid":"GO:0140139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"non-collagenous component of basement membrane","termid":"GO:0140144"}


id: PATO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The specific wavelength of light emitted by a fluorescent molecule, such as a labelled probe, upon absorption of light at the (higher) excitation wavelength.","definition_xrefs":["web:http://www.expertglossary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation emitting quality","termid":"PATO:0001299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emmision wavelength","termid":"PATO:0002059"}


id: PBO:0029476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shortened_telomeres","termid":"PBO:0029476"}


id: MONDO:0017640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cyanide-induced parkinsonism is a rare parkinsonian syndrome due to intoxication which develops in individuals surviving an acute cyanide intoxication episode or due to chronic exposure to small cyanide doses. It presents several weeks after acute exposure with progressive typical clinical features of parkinsonism including bradykinesia, rigidity, dystonia, hypomimia, hypokinetic dysarthria, postural instability and retropulsion but no resting or postural tremor. Brain MRI reveals bilateral lesions in the pallidum, posterior putamen, substantia nigra, subthalamic nucleus, temporal and occipital cortex, and cerebellum.","definition_xrefs":["Orphanet:306692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanide-induced parkinsonism","secondary_identifiers":["MEDGEN:1639789","SCTID:766872002","UMLS:C4707859","icd11.foundation:1717111858","GARD:21266"],"termid":"MONDO:0017640","xrefs":{"Monarch":{"xref_id":"0017640"}}}


id: MONDO:1010984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, dog","secondary_identifiers":["OMIA:000487-9615"],"termid":"MONDO:1010984","xrefs":{"Monarch":{"xref_id":"1010984"}}}


id: PBO:0060872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member E","termid":"PBO:0060872"}


id: MONDO:1011523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, horse","secondary_identifiers":["OMIA:000437-9796"],"termid":"MONDO:1011523","xrefs":{"Monarch":{"xref_id":"1011523"}}}


id: MONDO:0013738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 1p36.31-p36.13.","definition_xrefs":["DOID:0110538","PMID:21937999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 96","secondary_identifiers":["GARD:22642","MEDGEN:854865","OMIM:614414","UMLS:C3888337"],"synonyms":[{"name":"DFNB96","type":"narrow"},{"name":"autosomal recessive deafness 96","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 96","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 96","type":"narrow"},{"name":"deafness, autosomal recessive 96","type":"narrow"}],"termid":"MONDO:0013738","xrefs":{"Monarch":{"xref_id":"0013738"}}}


id: PBO:0057488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 606","termid":"PBO:0057488"}


id: PBO:0068039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 344","termid":"PBO:0068039"}


id: RO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_growth_of","termid":"RO:0002343"}


id: PBO:0078582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 55","termid":"PBO:0078582"}


id: MONDO:0006118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast fibrocystic change characterized by the prominence of fibrotic changes in the parenchyma.","definition_xrefs":["NCIT:C3660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"non-proliferative fibrocystic change of the breast","termid":"MONDO:0003724"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast fibrosis","secondary_identifiers":["ICD9:610.3","ICD10CM:N60.3","UMLS:C0156318","MEDGEN:57627","SCTID:29070004","EFO:1000145","DOID:10353"],"synonyms":[{"name":"breast fibrosclerosis","type":"exact"},{"name":"breast fibrosis","type":"exact"},{"name":"fibrosclerosis of breast","type":"exact"},{"name":"fibrosclerosis of the breast","type":"exact"},{"name":"fibrosis of breast","type":"exact"},{"name":"fibrosis of the breast","type":"exact"}],"termid":"MONDO:0006118","xrefs":{"Monarch":{"xref_id":"0006118"}}}


id: GO:0010756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of plasminogen activation. Plasminogen activation is the process in which plasminogen is processed to plasmin.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasminogen activation","termid":"GO:0010755"},{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"positively_regulates","term_name":"plasminogen activation","termid":"GO:0031639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"positive regulation of plasminogen activation","termid":"GO:0010756"}


id: GO:0043286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of poly(3-hydroxyalkanoates), polyesters of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"poly(3-hydroxyalkanoate) biosynthetic process","termid":"GO:0042621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of poly(3-hydroxyalkanoate) biosynthetic process","synonyms":[{"name":"regulation of PHA","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) anabolism","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) biosynthesis","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) formation","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) synthesis","type":"exact"}],"termid":"GO:0043286"}


id: GO:0005571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete untranslated RNA (obsolete GO:0005571)","synonyms":[{"name":"untranslated RNA","type":"exact"}],"termid":"GO:0005571"}


id: PBO:0053356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 260","termid":"PBO:0053356"}


id: GO:1905888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to very-low-density lipoprotein particle stimulus.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:TermGenie","GOC:aruk","PMID:7592957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:1905890"},{"relation_name":"negatively_regulates","term_name":"cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:0090731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to very-low-density lipoprotein particle stimulus","synonyms":[{"name":"down regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"down regulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"down-regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"down-regulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"downregulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"downregulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"inhibition of cellular response to VLDL particle stimulus","type":"narrow"},{"name":"inhibition of cellular response to very-low-density lipoprotein particle stimulus","type":"narrow"},{"name":"negative regulation of cellular response to VLDL particle stimulus","type":"exact"}],"termid":"GO:1905888"}


id: PBO:0054233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1615","termid":"PBO:0054233"}


id: PBO:0083786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family; human homolog DDX51 complements yeast dbp6 mutant","termid":"PBO:0083786"}


id: MONDO:0016136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebellar ataxia with peripheral neuropathy (obsolete MONDO:0016136)","secondary_identifiers":["Orphanet:207028"],"termid":"MONDO:0016136","xrefs":{"Monarch":{"xref_id":"0016136"}}}


id: PBO:0057005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 99a","termid":"PBO:0057005"}


id: GO:0031493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a histone that is assembled into a nucleosome.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosomal histone binding (obsolete GO:0031493)","termid":"GO:0031493"}


id: PBO:0062650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily A member 1","termid":"PBO:0062650"}


id: PBO:0066447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for excision 1-B domain containing","termid":"PBO:0066447"}


id: GO:0052344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the production of phytoalexins as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host phytoalexin production (obsolete GO:0052344)","synonyms":[{"name":"activation by symbiont of host phytoalexin production","type":"narrow"},{"name":"positive regulation by organism of phytoalexin production in other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of host phytoalexin production","type":"narrow"},{"name":"up regulation by symbiont of host phytoalexin production","type":"exact"},{"name":"up-regulation by symbiont of host phytoalexin production","type":"exact"},{"name":"upregulation by symbiont of host phytoalexin production","type":"exact"}],"termid":"GO:0052344"}


id: MONDO:1010267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, non-human animal","secondary_identifiers":["OMIA:001033"],"termid":"MONDO:1010267","xrefs":{"Monarch":{"xref_id":"1010267"}}}


id: PBO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3m","termid":"PBO:0000321"}


id: GO:0019761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"glucosinolate metabolic process","termid":"GO:0019760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucosinolate biosynthetic process","synonyms":[{"name":"glucosinolate anabolism","type":"exact"},{"name":"glucosinolate biosynthesis","type":"exact"},{"name":"glucosinolate formation","type":"exact"},{"name":"glucosinolate synthesis","type":"exact"}],"termid":"GO:0019761"}


id: PBO:0003267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp107","termid":"PBO:0003267"}


id: GO:0007635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of chemicals.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemosensory behavior","synonyms":[{"name":"behavioral response to chemical stimulus","type":"exact"},{"name":"behavioural response to chemical stimulus","type":"exact"},{"name":"chemosensory behaviour","type":"exact"}],"termid":"GO:0007635"}


id: FYPO:0005093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of protein phosphorylation is shorter than normal during a cellular response to hydroxyurea. All phosphorylation may be affected, or only phosphorylation of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"decreased duration of protein phosphorylation during cellular response to HU","type":"exact"},{"name":"decreased duration of protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased duration of protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced duration of protein phosphorylation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005093"}


id: PBO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 2","termid":"PBO:0003109"}


id: MOD:01524
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 116 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01524"}


id: MONDO:0009487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoconus and congenital hip dysplasia","secondary_identifiers":["MEDGEN:383732","MESH:C565456","UMLS:C1855647","OMIM:244510"],"synonyms":[{"name":"keratoconus and congenital hip dysplasia","type":"exact"}],"termid":"MONDO:0009487","xrefs":{"Monarch":{"xref_id":"0009487"}}}


id: MONDO:0024645
data:
  {"annotated_genes":["SJAG_01895","SJAG_00260","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the retroperitoneum.","definition_xrefs":["NCIT:C3357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null},"genotype_count":0,"is_obsolete":false,"name":"retroperitoneal neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:48439","UMLS:C0035358"],"synonyms":[{"name":"neoplasm of retroperitoneal space","type":"exact"},{"name":"retroperitoneal neoplasm","type":"exact"},{"name":"retroperitoneal space neoplasm","type":"exact"},{"name":"retroperitoneal space tumor","type":"exact"},{"name":"retroperitoneal space tumour","type":"exact"},{"name":"tumor of retroperitoneal space","type":"exact"},{"name":"tumour of retroperitoneal space","type":"exact"}],"termid":"MONDO:0024645","terms_by_termid":{"MONDO:0007273":null,"MONDO:0011121":null,"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0024645"}}}


id: GO:0018883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving caprolactam, hexahydro-2h-azepin-2-one, a cyclic amide of caproic acid used in manufacture of synthetic fibers of the polyamide type. It can cause local irritation.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete caprolactam metabolic process (obsolete GO:0018883)","synonyms":[{"name":"caprolactam metabolism","type":"exact"}],"termid":"GO:0018883"}


id: PBO:0043980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock domain containing E1","termid":"PBO:0043980"}


id: PBO:0074587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3C","termid":"PBO:0074587"}


id: GO:0009649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synchronization of a circadian rhythm to environmental time cues such as light.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entrainment of circadian clock","synonyms":[{"name":"regulation of circadian rhythm phase","type":"related"}],"termid":"GO:0009649"}


id: GO:0036421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of mycolate membrane consisting of gene products and protein complexes that are loosely bound to its external surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:md"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of external side of cell outer membrane","termid":"GO:0031242"},{"relation_name":"is_a","term_name":"extrinsic component of mycolate outer membrane","termid":"GO:0036420"},{"relation_name":"part_of","term_name":"external side of mycolate outer membrane","termid":"GO:0098568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of external side of mycolate outer membrane","synonyms":[{"name":"extrinsic to external side of MOM","type":"exact"},{"name":"extrinsic to external side of mycolate outer membrane","type":"narrow"},{"name":"extrinsic to external side of mycomembrane","type":"exact"}],"termid":"GO:0036421"}


id: GO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the autophagosome double-membrane.","definition_xrefs":["GOC:autophagy","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"autophagosome","termid":"GO:0005776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"autophagosome lumen","synonyms":[{"name":"autophagic vacuole lumen","type":"exact"}],"termid":"GO:0034423"}


id: PBO:0055810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylglycerol acyltransferase 1","termid":"PBO:0055810"}


id: MONDO:0100134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency","termid":"MONDO:0100133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex I deficiency, mitochondrial type","termid":"MONDO:0100134","xrefs":{"Monarch":{"xref_id":"0100134"}}}


id: PBO:0064789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1J","termid":"PBO:0064789"}


id: PBO:0039751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 2","termid":"PBO:0039751"}


id: FYPO:0007944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin loop formation is abnormal during meiotic prophase I.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during meiotic cell cycle","termid":"FYPO:0007943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal chromatin loop formation during meiotic prophase I","synonyms":[{"name":"abnormal chromatin looping during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007944"}


id: MONDO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of one or more lymph nodes. It is usually caused by an infectious process.","definition_xrefs":["NCIT:C26821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymph node disorder","termid":"MONDO:0004928"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphadenitis","secondary_identifiers":["DOID:1602","MESH:D008199","HP:0002840","icd11.foundation:1483611415","ICD9:289.1","SCTID:41174002","UMLS:C0024205","MEDGEN:7410","ICD9:683"],"synonyms":[{"name":"Inflammation of lymph node","type":"exact"},{"name":"acute adenitis","type":"narrow"},{"name":"acute lymphadenitis","type":"narrow"},{"name":"adenitis","type":"exact"},{"name":"chronic adenitis","type":"narrow"},{"name":"chronic lymphadenitis","type":"narrow"},{"name":"inflammation of lymph node","type":"exact"},{"name":"lymph gland infection","type":"related"},{"name":"lymph node inflammation","type":"exact"},{"name":"lymph nodeitis","type":"exact"},{"name":"lymphadenitis","type":"exact"},{"name":"lymphadenitis (disease)","type":"exact"}],"termid":"MONDO:0002052","xrefs":{"Monarch":{"xref_id":"0002052"}}}


id: PBO:0074295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory leukocyte peptidase inhibitor","termid":"PBO:0074295"}


id: PBO:0031642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_shmoo_formation","termid":"PBO:0031642"}


id: SO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pi helix has 4.1 residues per turn and a translation of 1.15 (=0.115 nm) along the helical axis. The N-H group of an amino acid forms a hydrogen bond with the C=O group of the amino acid five residues earlier.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right_handed_peptide_helix","termid":"SO:0001116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"pi_helix","secondary_identifiers":["BS:00153","http://en.wikipedia.org/wiki/Pi_helix"],"synonyms":[{"name":"pi helix","type":"exact"}],"termid":"SO:0001118"}


id: GO:0086043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a bundle of His cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"bundle of His cell to Purkinje myocyte signaling","termid":"GO:0086028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"bundle of His cell action potential","synonyms":[{"name":"bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086043"}


id: PBO:0031014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_actinomycin_D","termid":"PBO:0031014"}


id: MONDO:0011774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the MYO3A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 30","secondary_identifiers":["MEDGEN:335521","MESH:C564624","OMIM:607101","UMLS:C1846784","DOID:0110489","GARD:22603"],"synonyms":[{"name":"DFNB30","type":"narrow"},{"name":"MYO3A autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 30","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 30","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MYO3A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 30","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 30","type":"exact"},{"name":"deafness, autosomal recessive 30","type":"narrow"},{"name":"deafness, autosomal recessive type 30","type":"narrow"}],"termid":"MONDO:0011774","xrefs":{"Monarch":{"xref_id":"0011774"}}}


id: MONDO:0018994
data:
  {"annotated_genes":["SJAG_02016","SJAG_03811","SJAG_04882","SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010479"},{"annotations":[87393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010689"},{"annotations":[88105,88104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010699"}]},"cv_name":"mondo","definition":"A subtype of Charcot-Marie-Tooth disease with genetic defects on the X chromosome.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01402":null,"SJAG_02016":null,"SJAG_03811":null,"SJAG_04882":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type X","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1637021","UMLS:C4551551","ICD9:356.9","GARD:12444","Orphanet:64747","DOID:0050542","SCTID:230552007"],"synonyms":[{"name":"CMTX","type":"exact"},{"name":"COWCK","type":"exact"},{"name":"X-linked Charcot-Marie-Tooth disease","type":"related"},{"name":"X-linked hereditary motor and sensory neuropathy","type":"exact"}],"termid":"MONDO:0018994","terms_by_termid":{"MONDO:0010479":null,"MONDO:0010689":null,"MONDO:0010699":null},"xrefs":{"Monarch":{"xref_id":"0018994"}}}


id: GO:0042377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals.","definition_xrefs":["GOC:jl","PMID:24489112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"fat-soluble vitamin catabolic process","termid":"GO:0042363"},{"relation_name":"is_a","term_name":"vitamin K metabolic process","termid":"GO:0042373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin K catabolic process","synonyms":[{"name":"naphthoquinone catabolic process","type":"exact"},{"name":"naphthoquinone catabolism","type":"exact"},{"name":"vitamin K breakdown","type":"exact"},{"name":"vitamin K catabolism","type":"exact"},{"name":"vitamin K degradation","type":"exact"}],"termid":"GO:0042377"}


id: PBO:0088590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxic oxygen sensor, prolyl-3,4-dihydroxylase Ofd1","termid":"PBO:0088590"}


id: PBO:0043776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A2","termid":"PBO:0043776"}


id: FYPO:0008337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' ends of non-polyadenylated RNA molecules occurs to a lower extent than normal.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"decreased 3' end uridylation of non-polyadenylated RNA","termid":"FYPO:0008337"}


id: GO:0007069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase I promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase I promoter during mitotic cell cycle (obsolete GO:0007069)","synonyms":[{"name":"down regulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"},{"name":"downregulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"},{"name":"inhibition of transcription from RNA polymerase I promoter during mitosis","type":"narrow"},{"name":"mitotic repression of transcription from Pol I promoter","type":"exact"},{"name":"negative regulation of transcription from Pol I promoter during mitosis","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase I promoter, mitotic","type":"exact"}],"termid":"GO:0007069"}


id: PBO:0045588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 3","termid":"PBO:0045588"}


id: MONDO:0019190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile polyposis of infancy (JPI) is the most severe form of juvenile gastrointestinal polyposis and is characterized by pancolonic hamartomatous polyposis from stomach to rectum, diagnosed in the first two years of life.","definition_xrefs":["Orphanet:79076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile polyposis syndrome","termid":"MONDO:0017380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"juvenile polyposis of infancy","secondary_identifiers":["GARD:16696","icd11.foundation:378686036","UMLS:C5445164","MEDGEN:1778573"],"synonyms":[{"name":"infantile juvenile polyposis syndrome","type":"exact"},{"name":"infantile onset juvenile polyposis syndrome","type":"exact"},{"name":"juvenile polyposis syndrome of infancy","type":"exact"}],"termid":"MONDO:0019190","xrefs":{"Monarch":{"xref_id":"0019190"}}}


id: MONDO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete VACTERL association (obsolete MONDO:0002007)","termid":"MONDO:0002007","xrefs":{"Monarch":{"xref_id":"0002007"}}}


id: MONDO:0018294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with nephropathy as a major feature (obsolete MONDO:0018294)","secondary_identifiers":["Orphanet:371207"],"synonyms":[{"name":"CDG with nephropathy as a major feature","type":"exact"}],"termid":"MONDO:0018294","xrefs":{"Monarch":{"xref_id":"0018294"}}}


id: GO:0034911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phthalate + O2 + NADH + H+ = phthalate 3,4-cis-dihydrodiol + NAD+.","definition_xrefs":["UM-BBD_reactionID:r1444"],"gene_count":0,"genotype_count":0,"name":"obsolete phthalate 3,4-dioxygenase activity (obsolete GO:0034911)","termid":"GO:0034911"}


id: GO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows zygotene during prophase I of meiosis, and during which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007128"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"pachytene","secondary_identifiers":["Wikipedia:Meiosis#Pachytene","Wikipedia:Pachytene"],"termid":"GO:0000239"}


id: GO:2000648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stem cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"positively_regulates","term_name":"stem cell proliferation","termid":"GO:0072089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stem cell proliferation","termid":"GO:2000648"}


id: FYPO:0004238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K4 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3-K4 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004238"}


id: MONDO:0006336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endometrioid adenocarcinoma that arises from the ovary and exhibits squamous differentiation. The squamous cell component often has a cytologically benign appearance.","definition_xrefs":["NCIT:C40061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian endometrioid adenocarcinoma","termid":"MONDO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian endometrioid adenocarcinoma with squamous differentiation","secondary_identifiers":["MEDGEN:389178","UMLS:C2212017","EFO:1000417"],"synonyms":[{"name":"ovarian adenoacanthoma","type":"exact"},{"name":"ovarian adenosquamous carcinoma","type":"exact"},{"name":"ovarian endometrioid adenocarcinoma with squamous differentiation","type":"exact"}],"termid":"MONDO:0006336","xrefs":{"Monarch":{"xref_id":"0006336"}}}


id: GO:0031280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of a cyclase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclase activity (obsolete GO:0031280)","synonyms":[{"name":"down regulation of cyclase activity","type":"exact"},{"name":"down-regulation of cyclase activity","type":"exact"},{"name":"downregulation of cyclase activity","type":"exact"},{"name":"inhibition of cyclase activity","type":"narrow"}],"termid":"GO:0031280"}


id: GO:0061157
data:
  {"annotated_genes":["SJAG_03876","SJAG_00391","SJAG_03157","SJAG_01944","SJAG_01910","SJAG_00686","SJAG_04880","SJAG_04321","SJAG_01818","SJAG_04818","SJAG_05010","SJAG_05694","SJAG_03179","SJAG_04084","SJAG_00854","SJAG_01696","SJAG_01625","SJAG_16457","SJAG_00285","SJAG_00966","SJAG_05322","SJAG_04825","SJAG_04350","SJAG_03113","SJAG_02370","SJAG_00759","SJAG_01521","SJAG_04407","SJAG_04118","SJAG_00343","SJAG_02622","SJAG_02036","SJAG_03597","SJAG_02213","SJAG_03883","SJAG_04153","SJAG_02239","SJAG_04006","SJAG_02540","SJAG_01191","SJAG_02808","SJAG_02383","SJAG_01053","SJAG_04824","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120121],"is_not":false,"summary":null,"term":"GO:0061157"},{"annotations":[120334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[81498,59042,79454,77689,113997,76299],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[93623],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[106357,120322,104038,109432,117884,94194,95024,97866,107227,117445,99190,108436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[78504,117144,60614,101886,100002,100089,81523,72490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[94449,91736,96280,97459,118604,72135,80678,92730,77371,75572,79596,94546,81625,117660],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[93624],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[92731,119235,68029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"}]},"cv_name":"biological_process","definition":"Any process that decreases the stability of an mRNA molecule, making it more vulnerable to degradative processes. Messenger RNA is the intermediate molecule between DNA and protein. It includes UTR and coding sequences. It does not contain introns.","definition_xrefs":["GOC:dph","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"is_a","term_name":"RNA destabilization","termid":"GO:0050779"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01696":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02622":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03597":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA destabilization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0061157","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0060212":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:1990074":null}}


id: PBO:0045004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIM1 dimethyladenosine transferase 1 homolog pseudogene 1","termid":"PBO:0045004"}


id: PBO:0034372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-downstream_in_neural_circuit_with","termid":"PBO:0034372"}


id: PBO:0074413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM14 divergent transcript","termid":"PBO:0074413"}


id: PBO:0091939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent FMN reductase","termid":"PBO:0091939"}


id: GO:1905692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an endoplasmic reticulum into its constituent components.","definition_xrefs":["GOC:TermGenie","GOC:autophagy","GO_REF:0000079","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum disassembly","synonyms":[{"name":"ER disassembly","type":"exact"}],"termid":"GO:1905692"}


id: MONDO:0016814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternally inherited Leigh syndrome is a rare subtype of Leigh syndrome characterized clinically by encephalopathy, lactic acidosis, seizures, cardiomyopathy, respiratory disorders and developmental delay, with onset in infancy or early childhood, and resulting from maternally-inherited mutations in mitochondrial DNA.","definition_xrefs":["Orphanet:255210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leigh syndrome","termid":"MONDO:0009723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005244"],"is_obsolete":false,"name":"maternally-inherited Leigh syndrome","secondary_identifiers":["GARD:3671","MEDGEN:443976","UMLS:C2931092","MESH:C536035","SCTID:717052002"],"synonyms":[{"name":"Leigh disease, maternally inherited","type":"related"},{"name":"MILS","type":"exact"},{"name":"Subacute necrotizing encephalomyelopathy maternally inherited","type":"related"},{"name":"maternally inherited Leigh syndrome","type":"related"},{"name":"maternally-inherited Leigh disease","type":"exact"},{"name":"maternally-inherited infantile subacute necrotizing encephalopathy","type":"exact"},{"name":"mitochondrial DNA-associated Leigh syndrome","type":"related"}],"termid":"MONDO:0016814","xrefs":{"Monarch":{"xref_id":"0016814"}}}


id: GO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of humoral immune response","synonyms":[{"name":"activation of humoral immune response","type":"narrow"},{"name":"stimulation of humoral immune response","type":"narrow"},{"name":"up regulation of humoral immune response","type":"exact"},{"name":"up-regulation of humoral immune response","type":"exact"},{"name":"upregulation of humoral immune response","type":"exact"}],"termid":"GO:0002922"}


id: GO:1904032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of t-SNARE clustering.","definition_xrefs":["GOC:TermGenie","PMID:22528485","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"t-SNARE clustering","termid":"GO:1990656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of t-SNARE clustering","termid":"GO:1904032"}


id: MONDO:0012507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone dystrophy in which the cause of the disease is a mutation in the CACNA2D4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone dystrophy","termid":"MONDO:0000455"},{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"CACNA2D4-related retinopathy","termid":"MONDO:0700244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal cone dystrophy 4","secondary_identifiers":["UMLS:C1864849","DOID:0081023","OMIM:610478","GARD:10650","MEDGEN:355308","MESH:C566470"],"synonyms":[{"name":"CACNA2D4 cone dystrophy","type":"exact"},{"name":"RCD4","type":"related"},{"name":"cone dystrophy caused by mutation in CACNA2D4","type":"exact"},{"name":"retinal cone dystrophy 4","type":"exact"},{"name":"retinal cone dystrophy type 4","type":"exact"}],"termid":"MONDO:0012507","xrefs":{"Monarch":{"xref_id":"0012507"}}}


id: PBO:0086964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory light chain for the type II myosin Myo1p; binds to an IQ motif of Myo1p, localization to the bud neck depends on Myo1p; involved in the disassembly of the Myo1p ring","termid":"PBO:0086964"}


id: GO:0032079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endodeoxyribonuclease activity","termid":"GO:0032071"},{"relation_name":"is_a","term_name":"positive regulation of deoxyribonuclease activity","termid":"GO:0032077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endodeoxyribonuclease activity","synonyms":[{"name":"activation of endodeoxyribonuclease activity","type":"narrow"},{"name":"endodeoxyribonuclease activator","type":"related"},{"name":"stimulation of endodeoxyribonuclease activity","type":"narrow"},{"name":"up regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"up-regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"upregulation of endodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0032079"}


id: GO:0052618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + L-glutamate + factor F420-0 = GDP + H+ + factor gamma-F420-1 + phosphate.","definition_xrefs":["MetaCyc:RXN-8080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme F420-0 gamma-glutamyl ligase activity","termid":"GO:0043773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"coenzyme F420-0:L-glutamate ligase activity","secondary_identifiers":["EC:6.3.2.31","RHEA:30555"],"termid":"GO:0052618"}


id: PBO:0018090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase Rbk1 (predicted)","termid":"PBO:0018090"}


