# terms

id: MONDO:0100419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly KIT exon 8 mutation. (A molecular genetic abnormality indicating the presence of a mutation in exon 8 of the KIT gene located within 4q11-q12.)","definition_xrefs":["NCIT:C128660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, KIT exon 8 mutation","synonyms":[{"name":"AML, CD117 Exon 8 Mutation","type":"exact"},{"name":"AML, KIT Proto-Oncogene Tyrosine Protein Kinase Gene Exon 8 Mutation","type":"exact"},{"name":"AML, KIT exon 8 mutation","type":"exact"},{"name":"AML, c-KIT Exon 8 Mutation","type":"exact"},{"name":"AML, v-Kit Hardy-Zuckerman 4 Feline Sarcoma Viral Oncogene Homolog Gene Exon 8 Mutation","type":"exact"}],"termid":"MONDO:0100419","xrefs":{"Monarch":{"xref_id":"0100419"}}}


id: GO:0032516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the activity of a phosphoprotein phosphatase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphoprotein phosphatase activity (obsolete GO:0032516)","synonyms":[{"name":"activation of calcineurin activity","type":"narrow"},{"name":"activation of phosphoprotein phosphatase activity","type":"narrow"},{"name":"activation of protein phosphatase 3 activity","type":"related"},{"name":"activation of protein phosphatase type 2A activity","type":"narrow"},{"name":"activation of protein phosphatase type 2B activity","type":"narrow"},{"name":"calcineurin activation","type":"narrow"},{"name":"positive regulation of calcineurin activity","type":"narrow"},{"name":"positive regulation of protein phosphatase 2 activity","type":"related"},{"name":"positive regulation of protein phosphatase 3 activity","type":"related"},{"name":"positive regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"positive regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"stimulation of phosphoprotein phosphatase activity","type":"narrow"},{"name":"stimulation of protein phosphatase 2 activity","type":"related"},{"name":"stimulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"stimulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"up regulation of calcineurin activity","type":"narrow"},{"name":"up regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"up regulation of protein phosphatase 2 activity","type":"related"},{"name":"up regulation of protein phosphatase 3 activity","type":"related"},{"name":"up regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"up regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"up-regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"up-regulation of protein phosphatase 2 activity","type":"related"},{"name":"up-regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"up-regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"upregulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"upregulation of protein phosphatase 2 activity","type":"related"},{"name":"upregulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"upregulation of protein phosphatase type 2B activity","type":"narrow"}],"termid":"GO:0032516"}


id: PBO:0087285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) subunit (homolog of mammalian SRP54); contains the signal sequence-binding activity of SRP, interacts with the SRP RNA, and mediates binding of SRP to signal receptor; contains GTPase domain","termid":"PBO:0087285"}


id: PBO:0063575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and glutamate rich with coiled coil 1","termid":"PBO:0063575"}


id: PBO:0085228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of evolutionarily-conserved CCR4-NOT regulatory complex; contains single ABC-type ATPase domain but no transmembrane domain; interacts with several subunits of Mediator","termid":"PBO:0085228"}


id: PATO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cylindrical shape that is hollow.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cylindrical","termid":"PATO:0001873"},{"relation_name":"is_a","term_name":"hollow","termid":"PATO:0002078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubular","synonyms":[{"name":"tube like","type":"exact"},{"name":"tube-shaped","type":"exact"},{"name":"tubulate","type":"exact"}],"termid":"PATO:0002299"}


id: PR:O94469
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A high affinity choline transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urea active transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.13c","secondary_identifiers":["UniProtKB:O94469"],"synonyms":[{"name":"Spom972h-SLC5A7","type":"exact"}],"termid":"PR:O94469"}


id: PBO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YNL102W","termid":"PBO:0002048"}


id: PBO:0003723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphate aldolase Fba1","termid":"PBO:0003723"}


id: GO:0021628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the olfactory nerve. This process pertains to the initial formation of a structure from unspecified parts. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"olfactory nerve morphogenesis","termid":"GO:0021627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve formation","synonyms":[{"name":"CN I biosynthesis","type":"related"},{"name":"CN I formation","type":"related"}],"termid":"GO:0021628"}


id: PBO:0072154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 31","termid":"PBO:0072154"}


id: PBO:0090939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L10","termid":"PBO:0090939"}


id: PATO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation quality inhering in bearer by virtue of the bearer's exhibiting or being caused by radioactivity.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activity (of a radionuclide)","termid":"PATO:0001740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radioactive","termid":"PATO:0001741"}


id: PBO:0039835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 5","termid":"PBO:0039835"}


id: GO:0003382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"epithelial cell development","termid":"GO:0002064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis","termid":"GO:0003382"}


id: GO:0002819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaptive immune response","termid":"GO:0002819"}


id: PBO:0081726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 654","termid":"PBO:0081726"}


id: GO:1904928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any coreceptor activity that is involved in a canonical Wnt signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","PMID:24431302","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in canonical Wnt signaling pathway (obsolete GO:1904928)","synonyms":[{"name":"Wnt co-receptor activity, canonical signaling","type":"exact"},{"name":"Wnt co-receptor, canonical pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway via beta-catenin","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signalling pathway through beta-catenin","type":"exact"},{"name":"coreceptor activity involved in canonical Wnt receptor signaling pathway","type":"exact"},{"name":"coreceptor activity involved in canonical Wnt-activated signaling pathway","type":"exact"},{"name":"coreceptor activity involved in frizzled-1 receptor signaling pathway","type":"narrow"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway through beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway via beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signalling pathway through beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt receptor signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt-activated signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in frizzled-1 receptor signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway through beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway via beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signalling pathway through beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt receptor signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt-activated signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in frizzled-1 receptor signaling pathway","type":"related"}],"termid":"GO:1904928"}


id: PBO:0078516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM7 antisense RNA 2","termid":"PBO:0078516"}


id: GO:0051293
data:
  {"annotated_genes":["SJAG_00140","SJAG_02695","SJAG_02737","SJAG_02651","SJAG_00594"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106833,118947,78222,98924,106502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"The directed movement of the spindle to a specific location in the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"spindle localization","termid":"GO:0051653"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00594":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007010","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"establishment of spindle localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of spindle localisation","type":"exact"},{"name":"spindle positioning","type":"exact"}],"termid":"GO:0051293","terms_by_termid":{"GO:0000132":null}}


id: PBO:0055664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINGO1 antisense RNA 1","termid":"PBO:0055664"}


id: PBO:0041865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 10","termid":"PBO:0041865"}


id: GO:0071572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 56 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K56 deacetylation (obsolete GO:0071572)","termid":"GO:0071572"}


id: GO:0030005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent cations at the level of a cell.","definition_xrefs":["GOC:mah","GOC:ceb"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular di-, tri-valent inorganic cation homeostasis (obsolete GO:0030005)","synonyms":[{"name":"cellular di-, tri-valent inorganic cation homeostasis","type":"exact"}],"termid":"GO:0030005"}


id: MONDO:0013841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stutter disorder","termid":"MONDO:0000723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stuttering, familial persistent, 3","secondary_identifiers":["MEDGEN:766295","OMIM:614655","UMLS:C3553381"],"synonyms":[{"name":"STUT3","type":"exact"},{"name":"stuttering, familial persistent, 3","type":"exact"}],"termid":"MONDO:0013841","xrefs":{"Monarch":{"xref_id":"0013841"}}}


id: PBO:0065932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 6","termid":"PBO:0065932"}


id: FYPO:0004681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature polyadenylated 5.8S rRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature 5.8S rRNA level","termid":"FYPO:0001138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased polyadenylated 5.8S rRNA level","synonyms":[{"name":"decreased 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature polyadenylated 5.8S rRNA transcript level","type":"exact"},{"name":"decreased polyadenylated 5.8S rRNA accumulation","type":"related"},{"name":"decreased polyadenylated 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased polyadenylated 5.8S rRNA transcript level","type":"exact"},{"name":"reduced polyadenylated 5.8S rRNA level","type":"exact"}],"termid":"FYPO:0004681"}


id: GO:0030869
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that mediates transcriptional silencing at the rDNA locus (the name derives from regulator of nucleolar silencing and telophase). In Saccharomyces the complex contains Net1p, Sir2p, Cdc14p, and at least one more subunit.","definition_xrefs":["PMID:12196389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin silencing complex","termid":"GO:0005677"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005730","GO:0005634"],"is_obsolete":false,"name":"RENT complex","termid":"GO:0030869"}


id: PBO:0059659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 25","termid":"PBO:0059659"}


id: PBO:0089795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 conserved fungal multispanning membrane protein","termid":"PBO:0089795"}


id: PATO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's possessing or displaying a distinctive feature in type or degree or effect or force.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intensity","termid":"PATO:0000049"}


id: PBO:0063588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 3","termid":"PBO:0063588"}


id: GO:0080106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-methylthiopropyl-glucosinolate = 7-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"7-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080106"}


id: PBO:0044949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 5","termid":"PBO:0044949"}


id: PBO:0087867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of thiamine biosynthetic genes; interacts with regulatory factor Thi3p to control expression of thiamine biosynthetic genes with respect to thiamine availability; acts together with Pdc2p to respond to thiaminediphosphate demand, possibly as related to carbon source availability; zinc finger protein of the Zn(II)2Cys6 type","termid":"PBO:0087867"}


id: PBO:0029567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_site_selection","termid":"PBO:0029567"}


id: PBO:0058843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8072","termid":"PBO:0058843"}


id: PBO:0069837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1123, pseudogene","termid":"PBO:0069837"}


id: GO:1902371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tRNA catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:22919049","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of tRNA catabolic process","termid":"GO:1902370"},{"relation_name":"is_a","term_name":"negative regulation of tRNA metabolic process","termid":"GO:1903327"},{"relation_name":"negatively_regulates","term_name":"tRNA decay","termid":"GO:0016078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tRNA catabolic process","synonyms":[{"name":"down regulation of tRNA breakdown","type":"exact"},{"name":"down regulation of tRNA catabolic process","type":"exact"},{"name":"down regulation of tRNA catabolism","type":"exact"},{"name":"down regulation of tRNA degradation","type":"exact"},{"name":"down-regulation of tRNA breakdown","type":"exact"},{"name":"down-regulation of tRNA catabolic process","type":"exact"},{"name":"down-regulation of tRNA catabolism","type":"exact"},{"name":"down-regulation of tRNA degradation","type":"exact"},{"name":"downregulation of tRNA breakdown","type":"exact"},{"name":"downregulation of tRNA catabolic process","type":"exact"},{"name":"downregulation of tRNA catabolism","type":"exact"},{"name":"downregulation of tRNA degradation","type":"exact"},{"name":"inhibition of tRNA breakdown","type":"narrow"},{"name":"inhibition of tRNA catabolic process","type":"narrow"},{"name":"inhibition of tRNA catabolism","type":"narrow"},{"name":"inhibition of tRNA degradation","type":"narrow"},{"name":"negative regulation of tRNA breakdown","type":"exact"},{"name":"negative regulation of tRNA catabolism","type":"exact"},{"name":"negative regulation of tRNA degradation","type":"exact"}],"termid":"GO:1902371"}


id: FYPO:0005999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any transfer RNA (tRNA) primary transcript, tRNA precursor or processing intermediate, or mature tRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"altered tRNA or precursor level","synonyms":[{"name":"abnormal tRNA or precursor level","type":"exact"},{"name":"altered tRNA or precursor accumulation","type":"related"},{"name":"altered tRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered tRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered tRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005999"}


id: MONDO:0017302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of troponin (obsolete MONDO:0017302)","secondary_identifiers":["Orphanet:284786"],"termid":"MONDO:0017302","xrefs":{"Monarch":{"xref_id":"0017302"}}}


id: PATO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000357 protein concentration value (obsolete PATO:0000357)","termid":"PATO:0000357"}


id: PBO:0053168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoid enhancer binding factor 1","termid":"PBO:0053168"}


id: PBO:0005661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no message in thiamine Nmt1","termid":"PBO:0005661"}


id: MOD:01296
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to monosodium L-glutamate.","definition_xrefs":["PubMed:12216740","Unimod:30#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-glutamate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"MSG","type":"exact"},{"name":"Na1Glu","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01296"}


id: FYPO:0003490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint","termid":"FYPO:0002341"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0003489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"delayed mitotic DNA damage checkpoint deactivation during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint during cellular response to IR","type":"exact"},{"name":"prolonged mitotic DNA damage checkpoint during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003490"}


id: PR:P36209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sts1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(24(24(1)))-sterol reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.07c","synonyms":[{"name":"C-24(28) sterol reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sts1","type":"exact"},{"name":"sterol Delta(24(28))-reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36209"}


id: GO:0071331
data:
  {"annotated_genes":["SJAG_00574","SJAG_01699","SJAG_01254","SJAG_00472","SJAG_04026","SJAG_04312","SJAG_02444","SJAG_01754","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96174,117532,108816,110992,111502,107869,108466,118562,103805],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hexose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"},{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hexose stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071331","terms_by_termid":{"GO:0010619":null}}


id: MONDO:0000855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acromesomelic dysplasia (obsolete MONDO:0000855)","termid":"MONDO:0000855","xrefs":{"Monarch":{"xref_id":"0000855"}}}


id: PBO:0062811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 2","termid":"PBO:0062811"}


id: PBO:0029919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_ergosterol_level","termid":"PBO:0029919"}


id: GO:0051245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of the cellular defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular defense response","termid":"GO:0010185"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"negatively_regulates","term_name":"cellular defense response","termid":"GO:0006968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular defense response","synonyms":[{"name":"down regulation of cellular defense response","type":"exact"},{"name":"down-regulation of cellular defense response","type":"exact"},{"name":"downregulation of cellular defense response","type":"exact"},{"name":"inhibition of cellular defense response","type":"narrow"},{"name":"negative regulation of cellular defence response","type":"exact"}],"termid":"GO:0051245"}


id: PBO:0034454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomerase_holoenzyme_complex_assembly","termid":"PBO:0034454"}


id: FYPO:0002942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal, when the cell is in G0 phase. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid cell","termid":"FYPO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"swollen spheroid cell during G0","synonyms":[{"name":"enlarged spheroid cell during G0","type":"related"},{"name":"enlarged volume spheroid cell during G0","type":"exact"},{"name":"large spheroid cell during G0","type":"related"},{"name":"spheroid cell with increased cell size during G0","type":"related"},{"name":"spheroid cell with increased cell volume during G0","type":"exact"},{"name":"swollen rounded cell during G0","type":"exact"},{"name":"swollen spheroid cell during cell quiescence","type":"exact"},{"name":"swollen spheroid cell during quiescence","type":"exact"}],"termid":"FYPO:0002942"}


id: MONDO:0007684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete granulomatous disease, chronic, autosomal dominant type (obsolete MONDO:0007684)","termid":"MONDO:0007684","xrefs":{"Monarch":{"xref_id":"0007684"}}}


id: GO:0018929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methyl fluoride, fluorine-substituted methane, a gaseous halogenated hydrocarbon that has been investigated as an inhibitor of methanotrophy and nitrification in soils.","definition_xrefs":["UM-BBD_pathwayID:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"},{"relation_name":"is_a","term_name":"organofluorine metabolic process","termid":"GO:0090346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methyl fluoride metabolic process","synonyms":[{"name":"methyl fluoride metabolism","type":"exact"}],"termid":"GO:0018929"}


id: PBO:0025544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC ubiquitin conjugating enzyme E2, Ubc11/UbcP4","termid":"PBO:0025544"}


id: PBO:0062743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 2 pseudogene","termid":"PBO:0062743"}


id: PBO:0048084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 5","termid":"PBO:0048084"}


id: PBO:0052188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 1","termid":"PBO:0052188"}


id: PBO:0052840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-5, pseudogene","termid":"PBO:0052840"}


id: MONDO:1011115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, cattle","secondary_identifiers":["OMIA:000243-9913"],"termid":"MONDO:1011115","xrefs":{"Monarch":{"xref_id":"1011115"}}}


id: PBO:0001693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin Grx5","termid":"PBO:0001693"}


id: GO:0004378
data:
  {"annotated_genes":["SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61585],"is_not":false,"summary":null,"term":"GO:0004378"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-alpha-D-GlcNAc-diphospho-di-trans,poly-cis-dolichol + GDP-alpha-D-mannose = an alpha-D-Man-(1->3)-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-alpha-D-GlcNAc-diphospho-di-trans,poly-cis-dolichol + GDP + H+.","definition_xrefs":["RHEA:29515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,3-mannosyltransferase activity","termid":"GO:0000033"},{"relation_name":"is_a","term_name":"GlcNAc(2)-PP-Dol mannosyltransferase activity","termid":"GO:0120562"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03056":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-5462","EC:2.4.1.132"],"synonyms":[{"name":"GDP-D-mannose:D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol 3-alpha-mannosyltransferase activity","type":"exact"},{"name":"GDP-mannose-oligosaccharide-lipid mannosyltransferase II","type":"related"},{"name":"GDP-mannose:glycolipid 1,3-alpha-D-mannosyltransferase activity","type":"related"},{"name":"glycolipid 3-alpha-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-oligosaccharide-lipid II mannosyltransferase activity","type":"related"},{"name":"mannosyltransferase II activity","type":"related"}],"termid":"GO:0004378","terms_by_termid":{"GO:0004378":null}}


id: PBO:0076066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm-tail PG-rich repeat containing 3","termid":"PBO:0076066"}


id: GO:0006802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes involved in the induction or activation of catalase, an enzyme that catalyzes the conversion of H2O2 into H2O.","definition_xrefs":["GOC:jl","PMID:11245904"],"gene_count":0,"genotype_count":0,"name":"obsolete catalase reaction (obsolete GO:0006802)","synonyms":[{"name":"catalase reaction","type":"exact"},{"name":"hydroperoxidase reaction","type":"related"}],"termid":"GO:0006802"}


id: PBO:0083289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant exhibits synthetic phenotype with alpha-synuclein","termid":"PBO:0083289"}


id: PBO:0071643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 7","termid":"PBO:0071643"}


id: MONDO:0000649
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the sensory system","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system cancer","termid":"MONDO:0005872"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sensory system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060116"],"synonyms":[{"name":"cancer of sensory system","type":"exact"},{"name":"malignant neoplasm of sensory system","type":"exact"},{"name":"malignant sensory system neoplasm","type":"exact"},{"name":"sensory system cancer","type":"exact"}],"termid":"MONDO:0000649","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0000649"}}}


id: PBO:0087724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA transcriptional regulatory complex; not present in SAGA-like complex SLIK/SALSA; required for SAGA-mediated inhibition at some promoters","termid":"PBO:0087724"}


id: FYPO:0009079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of calcofluor and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to calcofluor and sodium dodecyl sulfate","synonyms":[{"name":"resistance to calcofluor and SDS","type":"exact"},{"name":"resistance to calcofluor and SDS during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and SDS in combination","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to calcofluor and SDS","type":"exact"},{"name":"resistant to calcofluor and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009079"}


id: MONDO:0024556
data:
  {"annotated_genes":["SJAG_00824"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87286],"is_not":false,"summary":null,"term":"MONDO:0024556"}]},"cv_name":"mondo","definition":"Any epilepsy, familial focal, with variable foci in which the cause of the disease is a mutation in the DEPDC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18202","DOID:0081421","OMIM:604364","MEDGEN:1641798","NCIT:C161005","UMLS:C4551983"],"synonyms":[{"name":"DEPDC5 epilepsy, familial focal, with variable foci","type":"exact"},{"name":"FFEVF1","type":"related"},{"name":"epilepsy, familial focal, with variable foci","type":"related"},{"name":"epilepsy, familial focal, with variable foci 1","type":"exact"},{"name":"epilepsy, familial focal, with variable foci caused by mutation in DEPDC5","type":"exact"},{"name":"epilepsy, partial, with variable foci","type":"related"}],"termid":"MONDO:0024556","terms_by_termid":{"MONDO:0024556":null},"xrefs":{"Monarch":{"xref_id":"0024556"}}}


id: PBO:0077746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG array regulator of axonemal microtubules 1","termid":"PBO:0077746"}


id: PBO:0082922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c lysine methyltransferase; trimethylates residue 72 of apo-cytochrome c (Cyc1p) in the cytosol; not required for normal respiratory growth","termid":"PBO:0082922"}


id: MOD:01864
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["Unimod:888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mTRAQ reporter+balance reagent acylated residue","termid":"MOD:01863"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 140.094963 Da","termid":"MOD:01868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ heavy","type":"related"}],"termid":"MOD:01864"}


id: MONDO:0016272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A transitional cell carcinoma that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"},{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"transitional cell carcinoma of the corpus uteri","secondary_identifiers":["UMLS:C5191668","GARD:20484","MEDGEN:1676303","Orphanet:213746"],"synonyms":[{"name":"body of uterus transitional cell carcinoma","type":"exact"},{"name":"endometrial transitional cell carcinoma","type":"related"}],"termid":"MONDO:0016272","xrefs":{"Monarch":{"xref_id":"0016272"}}}


id: PBO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6 (predicted)","termid":"PBO:0004597"}


id: PBO:0090065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA polymerase specificity factor, predicted rRNA methyltransferase Mtf1","termid":"PBO:0090065"}


id: PBO:0041077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of ribosomes BRX1","termid":"PBO:0041077"}


id: MONDO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A distinct marginal thinning of the cornea which causes high degree of against-the-rule astigmatism","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Terrien marginal degeneration","secondary_identifiers":["Orphanet:519410","GARD:22133","MEDGEN:543256","UMLS:C0271283"],"synonyms":[{"name":"Terrien's marginal degeneration","type":"exact"}],"termid":"MONDO:0033818","xrefs":{"Monarch":{"xref_id":"0033818"}}}


id: PBO:0000682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase (predicted)","termid":"PBO:0000682"}


id: PBO:0016066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit Pcc1 (predicted)","termid":"PBO:0016066"}


id: PBO:0005303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp28 (predicted)","termid":"PBO:0005303"}


id: PR:Q09905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is encoded by the Schizosaccharomyces pombe 972h- aps3 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 complex subunit sigma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.05","secondary_identifiers":["UniProtKB:Q09905"],"synonyms":[{"name":"AP-3 complex sigma3A subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aps3","type":"exact"},{"name":"adaptor-related protein complex 3 subunit sigma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin-associated/assembly/adaptor protein, small 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sigma-adaptin 3A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sigma3-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09905"}


id: GO:0090589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + trehalose (out) = protein cysteine + trehalose-6-phosphate (in).","definition_xrefs":["PMID:7608078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0005215","GO:0003824","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-trehalose phosphotransferase system transporter activity","termid":"GO:0090589"}


id: MONDO:1010517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly, non-human animal","termid":"MONDO:1010033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holoprosencephaly, horse","secondary_identifiers":["OMIA:000478-9796"],"termid":"MONDO:1010517","xrefs":{"Monarch":{"xref_id":"1010517"}}}


id: GO:0017076
data:
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id: GO:0140797
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id: PBO:0114524
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id: PBO:0000658
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id: MONDO:0020153
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id: PBO:0054901
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id: GO:0160173
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id: MONDO:0018157
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id: PBO:0056231
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id: GO:1902964
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. 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catabolism","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902964"}


id: PBO:0061238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP53 antisense RNA 1","termid":"PBO:0061238"}


id: PBO:0065880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB30 divergent transcript","termid":"PBO:0065880"}


id: GO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 5 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 5 signaling pathway","termid":"GO:0034146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 5 signaling pathway","synonyms":[{"name":"regulation of TLR5 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034147"}


id: GO:0097563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the caudal and posteriolateral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["PMID:5961344","PMID:16607022","ISBN:9780124260207","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left middle basal body pair","termid":"GO:0097563"}


id: PBO:0069191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 445, pseudogene","termid":"PBO:0069191"}


id: PBO:0085889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in nuclear processes of the Ran-GTPase cycle; involved in nuclear protein export; contains Ran Binding Domain and FxFG repeats; interacts with Srm1p, GTP-Gsp1p, Rna1p and Crm1p; relocalizes to the cytosol in response to hypoxia; not essential for viability","termid":"PBO:0085889"}


id: PBO:0059110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOS proto-oncogene, serine/threonine kinase","termid":"PBO:0059110"}


id: PBO:0046573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 15","termid":"PBO:0046573"}


id: PBO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VC","termid":"PBO:0060339"}


id: SO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted","termid":"SO:0001515"}


id: PBO:0031529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031529"}


id: PBO:0027368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_amino_acid_level","termid":"PBO:0027368"}


id: GO:0043917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-ribose 1,5-bisphosphate = D-ribulose 1,5-bisphosphate.","definition_xrefs":["RHEA:32243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribose 1,5-bisphosphate isomerase activity","secondary_identifiers":["MetaCyc:RXN-8801","EC:5.3.1.29"],"synonyms":[{"name":"ribose-1,5-bisphosphate isomerase activity","type":"exact"}],"termid":"GO:0043917"}


id: PBO:0054637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2042","termid":"PBO:0054637"}


id: PBO:0031858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle","termid":"PBO:0031858"}


id: PBO:0044286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 49B","termid":"PBO:0044286"}


id: PBO:0042537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 6","termid":"PBO:0042537"}


id: MONDO:0013811
data:
  {"annotated_genes":["SJAG_01413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88379],"is_not":false,"summary":null,"term":"MONDO:0013811"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 9 is a rare mitochondrial disease due to a defect in mitochondrial protein synthesis characterized by initially normal growth and development followed by the infantile-onset of failure to thrive, psychomotor delay, poor feeding, dyspnea, severe hypertrophic cardiomyopathy and hepatomegaly. Laboratory studies report increased plasma lactate and alanine, abnormal liver enzymes and decreased activity of mitochondrial respiratory chain complexes I, III, IV, and V.","definition_xrefs":["Orphanet:319509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1634481","DOID:0111472","OMIM:614582","GARD:17453","SCTID:763209008","UMLS:C4706315"],"synonyms":[{"name":"COXPD9","type":"exact"},{"name":"MRPL3 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 9","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MRPL3","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 9","type":"exact"}],"termid":"MONDO:0013811","terms_by_termid":{"MONDO:0013811":null},"xrefs":{"Monarch":{"xref_id":"0013811"}}}


id: GO:0060898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neurectodermal cells to cells of the eye field and their capacity to differentiate into eye field cells. Eye field cells are neurectodermal cells that will form the optic placode.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"part_of","term_name":"lens placode formation involved in camera-type eye formation","termid":"GO:0046619"},{"relation_name":"part_of","term_name":"neural plate regionalization","termid":"GO:0060897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye field cell fate commitment involved in camera-type eye formation","termid":"GO:0060898"}


id: PBO:0121033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C16orf46 antisense RNA 1","termid":"PBO:0121033"}


id: PBO:0061033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninein like","termid":"PBO:0061033"}


id: PATO:0001731
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a plant by virtue of the bearer's disposition to shed foliage.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deciduous (plant)","termid":"PATO:0001731"}


id: PBO:0066201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 2","termid":"PBO:0066201"}


id: MONDO:1012825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in pigs due to a mutation in the ABCA12 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, non-human animal","termid":"MONDO:1011427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, ABCA12-related, pig","secondary_identifiers":["OMIA:002238-9823"],"termid":"MONDO:1012825","xrefs":{"Monarch":{"xref_id":"1012825"}}}


id: PBO:0050125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 35","termid":"PBO:0050125"}


id: GO:0140239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle-mediated transport process in which the postsynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.","definition_xrefs":["PMID:12839988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"postsynaptic endocytosis","termid":"GO:0140239"}


id: GO:0005458
data:
  {"annotated_genes":["SJAG_00339"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73680],"is_not":false,"summary":null,"term":"GO:0005458"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a GDP-mannose from one side of a membrane to the other. GDP-mannose is a substance composed of mannose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide-sugar transmembrane transporter activity","termid":"GO:0036080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"GDP-mannose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005458","terms_by_termid":{"GO:0005458":null}}


id: MONDO:0014010
data:
  {"annotated_genes":["SJAG_02085","SJAG_02842"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87193,87194],"is_not":false,"summary":null,"term":"MONDO:0014010"}]},"cv_name":"mondo","definition":"Any autosomal recessive congenital ichthyosis in which the cause of the disease is a mutation in the CERS3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital non-bullous ichthyosiform erythroderma","termid":"MONDO:0019306"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02085":null,"SJAG_02842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3554349","DOID:0060718","GARD:15896","MEDGEN:767263","OMIM:615023"],"synonyms":[{"name":"ARCI9","type":"exact"},{"name":"autosomal recessive congenital ichthyosis 9","type":"exact"},{"name":"autosomal recessive congenital ichthyosis type 9","type":"exact"},{"name":"ichthyosis, congenital, autosomal recessive 9","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 9","type":"exact"}],"termid":"MONDO:0014010","terms_by_termid":{"MONDO:0014010":null},"xrefs":{"Monarch":{"xref_id":"0014010"}}}


id: PBO:0045216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene 1","termid":"PBO:0045216"}


id: GO:1900082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arginine catabolic process.","definition_xrefs":["GOC:dgf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine catabolic process","termid":"GO:0033242"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of arginine catabolic process","termid":"GO:1900081"},{"relation_name":"negatively_regulates","term_name":"L-arginine catabolic process","termid":"GO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of arginine catabolic process","synonyms":[{"name":"down regulation of arginine breakdown","type":"exact"},{"name":"down regulation of arginine catabolic process","type":"exact"},{"name":"down regulation of arginine catabolism","type":"exact"},{"name":"down regulation of arginine degradation","type":"exact"},{"name":"down-regulation of arginine breakdown","type":"exact"},{"name":"down-regulation of arginine catabolic process","type":"exact"},{"name":"down-regulation of arginine catabolism","type":"exact"},{"name":"down-regulation of arginine degradation","type":"exact"},{"name":"downregulation of arginine breakdown","type":"exact"},{"name":"downregulation of arginine catabolic process","type":"exact"},{"name":"downregulation of arginine catabolism","type":"exact"},{"name":"downregulation of arginine degradation","type":"exact"},{"name":"inhibition of arginine breakdown","type":"narrow"},{"name":"inhibition of arginine catabolic process","type":"narrow"},{"name":"inhibition of arginine catabolism","type":"narrow"},{"name":"inhibition of arginine degradation","type":"narrow"},{"name":"negative regulation of arginine breakdown","type":"exact"},{"name":"negative regulation of arginine catabolism","type":"exact"},{"name":"negative regulation of arginine degradation","type":"exact"}],"termid":"GO:1900082"}


id: MONDO:0012359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of combined T and B cell immunodeficiency (CID) characterized by severe and persistent cytomegalovirus (CMV) infection and autoimmune cytopenia.","definition_xrefs":["Orphanet:231154"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to partial RAG1 deficiency","secondary_identifiers":["MESH:C563691","SCTID:725290000","UMLS:C1835931","OMIM:609889","GARD:13712","MEDGEN:372161"],"synonyms":[{"name":"CID due to partial RAG1 deficiency","type":"exact"},{"name":"CID with expansion of gamma delta T cells","type":"exact"},{"name":"alpha/beta T-cell lymphopenia with gamma/DELTA T-cell expansion, severe CYTOMEGALOVIRUS infection, and autoimmunity","type":"related"},{"name":"combined immunodeficiency with expansion of gamma delta T cells","type":"exact"}],"termid":"MONDO:0012359","xrefs":{"Monarch":{"xref_id":"0012359"}}}


id: PBO:0073254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 6","termid":"PBO:0073254"}


id: MONDO:1012477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disproportionate short-limbed chondrodysplasia that occurs in dogs due to a mutation in the ITGA10 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disproportionate short-limbed chondrodysplasia, non-human animal","termid":"MONDO:1011965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disproportionate short-limbed chondrodysplasia, ITGA10-related, dog","secondary_identifiers":["OMIA:001886-9615"],"termid":"MONDO:1012477","xrefs":{"Monarch":{"xref_id":"1012477"}}}


id: PBO:0085735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in threonylcarbamoyl adenosine biosynthesis; Sua5p and Qri7p are necessary and sufficient for RNA t6A modification in vitro; null mutant lacks N6-threonylcarbamoyl adenosine (t6A) modification in the anticodon loop of ANN-decoding tRNA; member of conserved YrdC/Sua5 family; binds single-stranded telomeric DNA and null mutant has abnormal telomere length","termid":"PBO:0085735"}


id: PBO:0113047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome linkage inner nuclear membrane protein; CLIP, involved in perinuclear chromosome tethering and rDNA repeat stability; enriched at telomeres and subtelomeric regions; associates with and regulates subtelomeric genes, interacting with TREX (transcription export) factors; produces two splice variants with different functions; alternative splicing of SRC1 pre-mRNA is promoted by Hub1p; mutant is aneuploidy tolerant; SRC1 has a paralog, HEH2, that arose from the whole genome duplication","termid":"PBO:0113047"}


id: MONDO:0700265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the joints, bones, muscles, and/or connective tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic rheumatic syndrome","termid":"MONDO:0700265","xrefs":{"Monarch":{"xref_id":"0700265"}}}


id: GO:0102699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 2-methylpropionitrile + O2 + NADPH = 2-hydroxy-2-methylpropanenitrile + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylpropionitrile hydroxylase activity (obsolete GO:0102699)","termid":"GO:0102699"}


id: MONDO:0004471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The inflammation of one or more joints caused by a bacterial infection within the joint space. Symptoms include pain, stiffness, and decreased range of motion in the affected joint.","definition_xrefs":["NCIT:C26699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"infective arthritis","termid":"MONDO:0042485"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial arthritis","secondary_identifiers":["SCTID:48245008","EFO:1001351","ICD9:711.0","ICD9:711.96","NANDO:2200437","ICD9:711.90","ICD9:711.94","ICD9:711.93","MEDGEN:308434","ICD9:711.91","UMLS:C1692886","DOID:813","ICD9:711.95","MESH:D001170","ICD9:711.9","ICD9:711.92","ICD9:711.40","ICD9:711.97"],"synonyms":[{"name":"infectious arthritis","type":"broad"},{"name":"pyogenic arthritis","type":"exact"},{"name":"septic arthritis","type":"exact"}],"termid":"MONDO:0004471","xrefs":{"Monarch":{"xref_id":"0004471"}}}


id: PATO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being extended along a straight line, and is shaped like a reversed lance-point, with the tapering point attached to the leafstalk.","definition_xrefs":["PATOC:PG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear","termid":"PATO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblanceolate","termid":"PATO:0002330"}


id: GO:0110058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel endothelial cell differentiation.","definition_xrefs":["PMID:23072816","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell differentiation","termid":"GO:0045603"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell differentiation","termid":"GO:0110057"},{"relation_name":"positively_regulates","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel endothelial cell differentiation","termid":"GO:0110058"}


id: PBO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubp4 interactor Sfp47","termid":"PBO:0001650"}


id: PBO:0086454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; member of the fungal lipid-translocating exporter (LTE) family of proteins; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YLR046C has a paralog, RTA1, that arose from the whole genome duplication","termid":"PBO:0086454"}


id: MONDO:0024348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pityriasis capitis (obsolete MONDO:0024348)","secondary_identifiers":["SCTID:400201008"],"synonyms":[{"name":"pityriasis capitis","type":"exact"}],"termid":"MONDO:0024348","xrefs":{"Monarch":{"xref_id":"0024348"}}}


id: GO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in the aorta and responding to the input via central nervous system control.","definition_xrefs":["GOC:dph","GOC:mtg_cardio","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by aortic arch baroreceptor feedback","synonyms":[{"name":"aortic arch baroreceptor control of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003026"}


id: GO:2000991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of galactomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"galactomannan catabolic process","termid":"GO:0051682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of galactomannan catabolic process","termid":"GO:2000991"}


id: PBO:0075504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 2","termid":"PBO:0075504"}


id: GO:1901957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cutin biosynthetic process.","definition_xrefs":["GOC:tb","PMID:23243127","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"cutin biosynthetic process","termid":"GO:0010143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cutin biosynthetic process","synonyms":[{"name":"regulation of cutin anabolism","type":"exact"},{"name":"regulation of cutin biosynthesis","type":"exact"},{"name":"regulation of cutin formation","type":"exact"},{"name":"regulation of cutin synthesis","type":"exact"}],"termid":"GO:1901957"}


id: PBO:0082479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization","termid":"PBO:0082479"}


id: GO:0009717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoflavonoids, a group of water-soluble phenolic derivatives, isomeric with flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"isoflavonoid metabolic process","termid":"GO:0046287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"isoflavonoid biosynthetic process","synonyms":[{"name":"isoflavonoid anabolism","type":"exact"},{"name":"isoflavonoid biosynthesis","type":"exact"},{"name":"isoflavonoid formation","type":"exact"},{"name":"isoflavonoid synthesis","type":"exact"}],"termid":"GO:0009717"}


id: MOD:01244
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamioc acid residue to the potassium glutamate salt.","definition_xrefs":["Unimod:530#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"monopotassium salt","termid":"MOD:01072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium L-glutamate","synonyms":[{"name":"Cation:K","type":"related"},{"name":"Replacement of proton by potassium","type":"related"}],"termid":"MOD:01244"}


id: GO:0032399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a HECT, 'Homologous to the E6-AP Carboxy-Terminus', domain of a protein.","definition_xrefs":["GOC:mah","Pfam:PF00632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"HECT domain binding","termid":"GO:0032399"}


id: FYPO:0009097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing xylose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on xylose carbon source","synonyms":[{"name":"decreased growth on xylose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on xylose carbon source","type":"exact"},{"name":"reduced cell growth on xylose carbon source","type":"related"},{"name":"slow cell growth on xylose carbon source","type":"narrow"}],"termid":"FYPO:0009097"}


id: PBO:0051394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 2","termid":"PBO:0051394"}


id: PBO:0003030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human COMT ortholog 2","termid":"PBO:0003030"}


id: GO:0098685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse between the Schaffer collateral axon of a CA3 pyramidal cell and a CA1 pyramidal cell.","definition_xrefs":["PMID:16399689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schaffer collateral - CA1 synapse","termid":"GO:0098685"}


id: PBO:0073540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing ring finger 2","termid":"PBO:0073540"}


id: GO:0005135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-3 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-3 receptor binding","synonyms":[{"name":"IL-3","type":"narrow"},{"name":"interleukin-3 receptor ligand","type":"narrow"}],"termid":"GO:0005135"}


id: PBO:0043260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 18","termid":"PBO:0043260"}


id: MONDO:0007167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atelosteogenesis I is a perinatally lethal skeletal dysplasia characterized by severe short-limbed dwarfism, joint dislocations, club feet along with distinctive facies and radiographic findings.","definition_xrefs":["Orphanet:1190"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"atelosteogenesis","termid":"MONDO:0000389"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"atelosteogenesis type I","secondary_identifiers":["UMLS:C0265283","MEDGEN:82701","icd11.foundation:449799342","GARD:9287","OMIM:108720","SCTID:725141006","MESH:C535396"],"synonyms":[{"name":"AO1","type":"exact"},{"name":"AOI","type":"exact"},{"name":"atelosteogenesis type 1","type":"exact"},{"name":"atelosteogenesis, type 1","type":"related"},{"name":"atelosteogenesis, type I","type":"related"},{"name":"giant cell chondrodysplasia","type":"exact"},{"name":"spondylo-humero-femoral dysplasia","type":"exact"},{"name":"spondylohumerofemoral hypoplasia","type":"related"}],"termid":"MONDO:0007167","xrefs":{"Monarch":{"xref_id":"0007167"}}}


id: PBO:0036390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human LCHN ortholog","termid":"PBO:0036390"}


id: MONDO:0020074
data:
  {"annotated_genes":["SJAG_04513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013526"}]},"cv_name":"mondo","definition":"A rare group of disorders characterized by the development of myoclonic and tonic-clonic epileptic seizures associated with progressive degeneration of the nervous system.","definition_xrefs":["NCIT:C7636"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"excluded_subClassOf","term_name":"obsolete adolescent-onset epilepsy syndrome (obsolete MONDO:0020073)","termid":"MONDO:0020073"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"},{"relation_name":"is_a","term_name":"variable-age epilepsy syndrome with developmental and/or epileptic encephalopathy or progressive neurological deterioration","termid":"MONDO:0800495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"progressive myoclonus epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D020191","icd11.foundation:173613583","SCTID:267581004","NORD:1617","OMIMPS:254800","GARD:7140","UMLS:C0751778","Orphanet:98261","DOID:891","NANDO:2100237","MEDGEN:199732","NANDO:1200953"],"synonyms":[{"name":"PME","type":"exact"},{"name":"epilepsy, progressive myoclonic","type":"exact"},{"name":"familial progressive myoclonic epilepsy","type":"related"},{"name":"progressive myoclonic epilepsy","type":"exact"},{"name":"progressive myoclonic epilepsy (disorder) [ambiguous]","type":"exact"},{"name":"progressive myoclonus epilepsy","type":"exact"}],"termid":"MONDO:0020074","terms_by_termid":{"MONDO:0013526":null},"xrefs":{"Monarch":{"xref_id":"0020074"}}}


id: SO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Germline genomic DNA including D-region with 5' UTR and 3' UTR, also designated as D-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_gene_segment","synonyms":[{"name":"D gene","type":"exact"},{"name":"D-GENE","type":"exact"},{"name":"INSDC_feature:D_segment","type":"exact"}],"termid":"SO:0000458"}


id: PBO:0045265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNL-type zinc finger","termid":"PBO:0045265"}


id: MONDO:0021109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endophytic lesion in the urinary tract which shares several morphologic features with urothelial papilloma. This lesion may recur after complete excision. Transitional cell carcinomas may arise within inverted urothelial papillomas.","definition_xrefs":["NCIT:C6192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted transitional cell papilloma","termid":"MONDO:0003064"},{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted urothelial papilloma","secondary_identifiers":["MEDGEN:233583","ONCOTREE:IUP","UMLS:C1334282"],"synonyms":[{"name":"IUP","type":"related"},{"name":"inverted papilloma of urinary tract","type":"exact"},{"name":"inverted urothelial papilloma","type":"exact"},{"name":"urinary tract inverted papilloma","type":"exact"},{"name":"urothelium inverted papilloma","type":"exact"}],"termid":"MONDO:0021109","xrefs":{"Monarch":{"xref_id":"0021109"}}}


id: PBO:0089415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc2/TPR repeat protein Oca3","termid":"PBO:0089415"}


id: PBO:0055246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2673","termid":"PBO:0055246"}


id: PBO:0081205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 7","termid":"PBO:0081205"}


id: PBO:0068702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 83, pseudogene","termid":"PBO:0068702"}


id: PBO:0056271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1A member 2","termid":"PBO:0056271"}


id: PBO:0017616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med6","termid":"PBO:0017616"}


id: MONDO:0009060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic disease of lung","secondary_identifiers":["MEDGEN:640840","OMIM:219600","UMLS:C0555214","MESH:C563237"],"synonyms":[{"name":"cystic disease of lung","type":"exact"}],"termid":"MONDO:0009060","xrefs":{"Monarch":{"xref_id":"0009060"}}}


id: PBO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase deficiency with cataracts","termid":"PBO:0004971"}


id: SO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that is segregating in one or more natural populations of a species.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allele","termid":"SO:0001023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_sequence_variant","synonyms":[{"name":"polymorphic sequence variant","type":"exact"}],"termid":"SO:0001025"}


id: SO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multi-chromosome aberration generated by reassortment of other aberration components; presumed to have a deficiency or a duplication.","definition_xrefs":["FB:gm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assortment_derived_variation","termid":"SO:0001504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_aneuploid","synonyms":[{"name":"assortment derived aneuploid","type":"exact"}],"termid":"SO:0000803"}


id: GO:0019326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrotoluene metabolic process (obsolete GO:0019326)","synonyms":[{"name":"nitrotoluene metabolism","type":"exact"}],"termid":"GO:0019326"}


id: GO:0097218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the cell wall of a sieve tube member that bears one or more highly specialized sieve areas.","definition_xrefs":["ISBN:0471738433","POC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"sieve plate","termid":"GO:0097218"}


id: MONDO:1010171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysosomal storage disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease, non-human animal","secondary_identifiers":["OMIA:000616"],"termid":"MONDO:1010171","xrefs":{"Monarch":{"xref_id":"1010171"}}}


id: PBO:0086694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; in many strains, YML002W is continuous with YML003W, and is predicted to encode a single protein of 1090 aa with a full-length VPS9 domain; in strains S288C, W303, and CEN.PK, a single thymine residue is deleted near the 3' end of YML003W at ChrXIII:264337, causing a frameshift and premature stop codon, truncating YML003W","termid":"PBO:0086694"}


id: MONDO:0011516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early response to neural induction gene","secondary_identifiers":["UMLS:C1854633","MEDGEN:344332","OMIM:605105"],"synonyms":[{"name":"Erni","type":"related"},{"name":"early response to neural induction gene","type":"exact"}],"termid":"MONDO:0011516","xrefs":{"Monarch":{"xref_id":"0011516"}}}


id: FYECO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which manganese chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MnCl2","synonyms":[{"name":"manganese chloride added","type":"exact"}],"termid":"FYECO:0000279"}


id: GO:0051789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete response to protein (obsolete GO:0051789)","synonyms":[{"name":"response to protein","type":"exact"},{"name":"response to protein stimulus","type":"exact"}],"termid":"GO:0051789"}


id: PBO:0005470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CtIP-related endonuclease","termid":"PBO:0005470"}


id: GO:0070500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds.","definition_xrefs":["PMID:16689787","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete poly-gamma-glutamate metabolic process (obsolete GO:0070500)","synonyms":[{"name":"poly-gamma-glutamate metabolism","type":"exact"}],"termid":"GO:0070500"}


id: GO:0008872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate = 5-dehydro-4-deoxy-D-glucarate + H2O.","definition_xrefs":["EC:4.2.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"glucarate dehydratase activity","secondary_identifiers":["RHEA:14573","MetaCyc:GLUCARDEHYDRA-RXN"],"synonyms":[{"name":"D-glucarate dehydratase activity","type":"related"},{"name":"D-glucarate hydro-lyase (5-dehydro-4-deoxy-D-glucarate-forming)","type":"related"},{"name":"D-glucarate hydro-lyase activity","type":"related"}],"termid":"GO:0008872"}


id: FYPO:0007051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell differs from normal during a cellular stress response to zinc ions. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level during cellular response to zinc ion","termid":"FYPO:0001550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"altered protein level during stress response to zinc ion","synonyms":[{"name":"abnormal protein level during stress response to zinc ion","type":"exact"},{"name":"altered cellular protein level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"altered protein level during cellular response to excess zinc","type":"exact"},{"name":"altered protein level during cellular response to high zinc level","type":"exact"},{"name":"altered protein level during cellular response to replete zinc","type":"related"},{"name":"altered protein level during cellular stress response to zinc ion","type":"exact"},{"name":"altered protein level during response to zinc ion stress","type":"exact"},{"name":"altered protein level during response to zinc toxicity","type":"related"},{"name":"altered protein level during stress response to zinc","type":"exact"},{"name":"altered protein level during stress response to zinc ion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007051"}


id: PBO:0067093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 130, pseudogene","termid":"PBO:0067093"}


id: GO:0014844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of myoblasts, resulting in the expansion of the cell population. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["PMID:16607119","GOC:ef","GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast proliferation","termid":"GO:0051450"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast proliferation involved in skeletal muscle regeneration","termid":"GO:0014844"}


id: FYPO:0007113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the organization of the microtubule cytoskeleton during all or part of the meiotic cell cycle. Microtubule cytoskeleton organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GO:0000226","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","synonyms":[{"name":"abnormal microtubule cytoskeleton organisation during meiotic cell cycle","type":"exact"},{"name":"abnormal microtubule organisation during meiotic cell cycle","type":"related"},{"name":"abnormal microtubule organization during meiotic cell cycle","type":"related"},{"name":"disorganized microtubule cytoskeleton during meiotic cell cycle","type":"related"},{"name":"microtubule cytoskeleton defects during meiotic cell cycle","type":"exact"},{"name":"microtubule organization defects during meiotic cell cycle","type":"related"}],"termid":"FYPO:0007113"}


id: MONDO:0015487
data:
  {"annotated_genes":["SJAG_05199","SJAG_04553","SJAG_02229","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011451"},{"annotations":[87026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014051"},{"annotations":[87005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014667"},{"annotations":[87003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014668"}]},"cv_name":"mondo","definition":"Fatal infantile cytochrome C oxidase deficiency is a very rare mitochondrial disease characterized clinically by cardioencephalomyopathy resulting in death in infancy.","definition_xrefs":["Orphanet:1561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02229":null,"SJAG_04397":null,"SJAG_04553":null,"SJAG_05199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005267","MONDO:0004069","MONDO:0005336"],"is_obsolete":false,"name":"fatal infantile encephalocardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050713","SCTID:718124006","MEDGEN:903874","GARD:16569","UMLS:C4273730"],"synonyms":[{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency","type":"exact"},{"name":"fatal infantile COX deficiency","type":"exact"},{"name":"fatal infantile cardioencephalomyopathy due to cytochrome C oxidase deficiency","type":"exact"},{"name":"fatal infantile cardioencephalomyopathy due to cytochrome c oxidase deficiency","type":"exact"},{"name":"fatal infantile cytochrome C oxidase deficiency","type":"related"},{"name":"fatal infantile encephalomyopathy","type":"related"}],"termid":"MONDO:0015487","terms_by_termid":{"MONDO:0011451":null,"MONDO:0014051":null,"MONDO:0014667":null,"MONDO:0014668":null},"xrefs":{"Monarch":{"xref_id":"0015487"}}}


id: PBO:0055577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3013","termid":"PBO:0055577"}


id: MONDO:0004230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm arising from mesothelial cells. It is characterized by the formation of glandular and tubular patterns. It can occur in several anatomic sites including the pleura, peritoneum, and epididymis.","definition_xrefs":["NCIT:C3762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomatoid tumor","secondary_identifiers":["UMLS:C0206675","MEDGEN:60207","ICDO:9054/0","DOID:746","ICDO:9052/0","ICDO:9050/0","MESH:D018254"],"synonyms":[{"name":"adenomatoid tumor","type":"exact"},{"name":"adenomatoid tumor (morphologic abnormality)","type":"exact"},{"name":"adenomatoid tumor NOS (morphologic abnormality)","type":"exact"},{"name":"adenomatoid tumor, benign","type":"exact"},{"name":"adenomatoid tumour (morphologic abnormality)","type":"exact"},{"name":"adenomatoid tumour NOS (morphologic abnormality)","type":"exact"},{"name":"benign localised epithelial mesothelioma","type":"exact"},{"name":"benign localized epithelial mesothelioma","type":"exact"},{"name":"benign mesothelial neoplasm","type":"related"},{"name":"benign mesothelial tumor","type":"related"},{"name":"benign mesothelial tumour","type":"related"},{"name":"benign mesothelioma","type":"related"},{"name":"benign neoplasm of mesothelium","type":"related"},{"name":"benign neoplasm of the mesothelium","type":"related"},{"name":"benign tumor of mesothelium","type":"related"},{"name":"benign tumor of the mesothelium","type":"related"},{"name":"benign tumour of mesothelium","type":"related"},{"name":"benign tumour of the mesothelium","type":"related"},{"name":"mesothelioma, benign","type":"related"}],"termid":"MONDO:0004230","xrefs":{"Monarch":{"xref_id":"0004230"}}}


id: PBO:0047061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A opposite strand","termid":"PBO:0047061"}


id: MOD:00042
data:
  {"annotated_genes":["SJAG_02183","SJAG_00318","SJAG_02472","SJAG_01587","SJAG_00331","SJAG_02498"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82403,82466,82474,82497,82563,82598],"is_not":false,"summary":null,"term":"MOD:00042"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartic 4-phosphoric anhydride.","definition_xrefs":["RESID:AA0033","Unimod:21#D","ChEBI:15836","PubMed:4357737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"O-phosphorylated residue","termid":"MOD:01455"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00318":null,"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null,"SJAG_02472":null,"SJAG_02498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"L-aspartic 4-phosphoric anhydride","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-amino-4-oxo-4-(phosphonooxy)butanoic acid","type":"exact"},{"name":"2-aminobutanedioic 4-phosphoric anhydride","type":"exact"},{"name":"2-azanyl-4-oxo-4-(phosphonooxy)butanoic acid","type":"exact"},{"name":"4-oxo-O-phosphono-L-homoserine","type":"exact"},{"name":"4-phosphoaspartic acid","type":"exact"},{"name":"4-phosphorylated L-aspartatic acid","type":"exact"},{"name":"ACT_SITE 4-aspartylphosphate intermediate","type":"exact"},{"name":"L-aspartic 4-phosphoric anhydride","type":"exact"},{"name":"MOD_RES 4-aspartylphosphate","type":"exact"},{"name":"PAsp","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"beta-aspartyl phosphate","type":"exact"}],"termid":"MOD:00042","terms_by_termid":{"MOD:00042":null}}


id: PBO:0068227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 534","termid":"PBO:0068227"}


id: PBO:0071582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a","termid":"PBO:0071582"}


id: GO:0030640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"polyketide catabolic process","synonyms":[{"name":"polyketide breakdown","type":"exact"},{"name":"polyketide catabolism","type":"exact"},{"name":"polyketide degradation","type":"exact"}],"termid":"GO:0030640"}


id: PBO:0042443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 3","termid":"PBO:0042443"}


id: PBO:0091030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp10","termid":"PBO:0091030"}


id: GO:1900991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of scopolamine.","definition_xrefs":["GOC:yaf","PMID:18251710","PMID:32879484","GOC:TermGenie","PMID:16720272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"scopolamine biosynthetic process","secondary_identifiers":["GO:1900989"],"synonyms":[{"name":"scopolamine anabolism","type":"exact"},{"name":"scopolamine biosynthesis","type":"exact"},{"name":"scopolamine formation","type":"exact"},{"name":"scopolamine metabolic process","type":"broad"},{"name":"scopolamine metabolism","type":"broad"},{"name":"scopolamine synthesis","type":"exact"}],"termid":"GO:1900991"}


id: PBO:0028955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_small_cells_(obsolete_FYPO:0002846)","termid":"PBO:0028955"}


id: PBO:0071306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 29","termid":"PBO:0071306"}


id: PBO:0076381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin precursor 3","termid":"PBO:0076381"}


id: GO:0009671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nitrate(out) + H+(out) = nitrate(in) + H+(in).","definition_xrefs":["PMID:10066586","PMID:1990981","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"high-affinity secondary active nitrite transmembrane transporter activity","termid":"GO:0015513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nitrate:proton symporter activity","synonyms":[{"name":"nitrate(chlorate):hydrogen symporter activity","type":"exact"},{"name":"nitrate(chlorate):proton symporter activity","type":"exact"},{"name":"nitrate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009671"}


id: MONDO:0005073
data:
  {"annotated_genes":["SJAG_02855","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[88719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[87797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[87379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[86939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"}]},"cv_name":"mondo","definition":"A neoplasm composed of melanocytes that usually appears as a dark spot on the skin.","definition_xrefs":["NCIT:C7570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"melanocytic skin neoplasm","termid":"MONDO:0021583"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02855":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"melanocytic nevus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Wikipedia:Nevus","EFO:0009675","UMLS:C0027962","SCTID:400096001","MESH:D009506","MEDGEN:14364"],"synonyms":[{"name":"melanocytic Nevus","type":"exact"},{"name":"melanotic Nevus","type":"exact"},{"name":"mole","type":"exact"},{"name":"mole of skin","type":"exact"},{"name":"nevus","type":"exact"}],"termid":"MONDO:0005073","terms_by_termid":{"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0005073"}}}


id: PBO:0089991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome assembly protein Mam33","termid":"PBO:0089991"}


id: MONDO:0013449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the CRX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"CRX-related retinopathy","termid":"MONDO:1040064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 7","secondary_identifiers":["ICD10CM:H35.5","MEDGEN:462542","OMIM:613829","UMLS:C3151192","GARD:10880","DOID:0110333"],"synonyms":[{"name":"CRX Leber congenital amaurosis","type":"exact"},{"name":"LCA7","type":"exact"},{"name":"Leber congenital amaurosis 7","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in CRX","type":"exact"},{"name":"Leber congenital amaurosis type 7","type":"exact"}],"termid":"MONDO:0013449","xrefs":{"Monarch":{"xref_id":"0013449"}}}


id: PBO:0036243
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli PyrB","termid":"PBO:0036243"}


id: FYPO:0006774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore septin ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:20123972","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiotic cell cycle","termid":"FYPO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to prospore septin ring","synonyms":[{"name":"normal protein localisation to prospore septin ring","type":"exact"},{"name":"normal protein localization to forespore septin ring","type":"exact"},{"name":"normal protein localization to septin ring during prospore membrane assembly","type":"exact"}],"termid":"FYPO:0006774"}


id: PBO:0062554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily S member 24 pseudogene","termid":"PBO:0062554"}


id: PBO:0040815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRD4 interacting chromatin remodeling complex associated protein","termid":"PBO:0040815"}


id: GO:0180029
data:
  {"annotated_genes":["SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117789],"is_not":false,"summary":null,"term":"GO:0180029"}]},"cv_name":"biological_process","definition":"The directed movement of phosphate ions (Pi) from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phosphate ion export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180029","terms_by_termid":{"GO:0180029":null}}


id: GO:0103085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-7-methylthioheptanoate + acetyl-CoA + H2O = H+ + 2-(5'-methylthio)pentylmalate + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-(5'-methylthio)pentylmalate synthase activity (obsolete GO:0103085)","termid":"GO:0103085"}


id: PBO:0055698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLGL scribble cell polarity complex component 1","termid":"PBO:0055698"}


id: MONDO:0014786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any IgA glomerulonephritis in which the cause of the disease is a mutation in the SPRY2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgA nephropathy, susceptibility to","termid":"MONDO:0100555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgA nephropathy, susceptibility to, 3","secondary_identifiers":["UMLS:C4225194","OMIM:616818","MEDGEN:897340"],"synonyms":[{"name":"IGAN3","type":"exact"},{"name":"IgA glomerulonephritis caused by mutation in SPRY2","type":"exact"},{"name":"IgA nephropathy, susceptibility to, 3","type":"exact"},{"name":"IgA nephropathy, susceptibility to, 3; IGAN3","type":"exact"},{"name":"IgA nephropathy, susceptibility to, type 3","type":"exact"},{"name":"SPRY2 IgA glomerulonephritis","type":"exact"},{"name":"susceptibility to IgA nephropathy 3","type":"related"}],"termid":"MONDO:0014786","xrefs":{"Monarch":{"xref_id":"0014786"}}}


id: MONDO:0002827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete urinary system cancer (obsolete MONDO:0002827)","termid":"MONDO:0002827","xrefs":{"Monarch":{"xref_id":"0002827"}}}


id: FYPO:0007501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly, arrangement of constituent parts, or disassembly of the horsetail-astral microtubule array is abnormal.","definition_xrefs":["GO:0032118","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","termid":"FYPO:0007113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal horsetail-astral microtubule organization","synonyms":[{"name":"abnormal horsetail-astral microtubule array organization","type":"exact"},{"name":"abnormal horsetail-astral microtubule organisation","type":"exact"},{"name":"abnormal horsetail-astral microtubule organization and biogenesis","type":"related"}],"termid":"FYPO:0007501"}


id: PBO:0086324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to Kre9p; Kre9p is involved in cell wall beta 1,6-glucan synthesis; overproduction suppresses growth defects of a kre9 null mutant; required for propionic acid resistance","termid":"PBO:0086324"}


id: PBO:0016981
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OrDered Splicing","termid":"PBO:0016981"}


id: GO:0008558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyses the reaction: ATP + H2O + guanine(out) = ADP + phosphate + guanine(in).","definition_xrefs":["RHEA:20832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine transmembrane transporter activity","termid":"GO:0015208"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type guanine transporter activity","secondary_identifiers":["MetaCyc:3.6.3.37-RXN","EC:7.6.2.6"],"synonyms":[{"name":"ATP-dependent guanine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled guanine transmembrane transporter activity","type":"related"},{"name":"guanine ABC transporter","type":"exact"},{"name":"guanine-transporting ATPase activity","type":"related"}],"termid":"GO:0008558"}


id: GO:0044166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the host cell endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum lumen","synonyms":[{"name":"host endoplasmic reticulum lumen","type":"exact"}],"termid":"GO:0044166"}


id: PBO:0069573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 845, pseudogene","termid":"PBO:0069573"}


id: GO:0071212
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An elaborate tubulolamellar membrane system that underlies the postsynaptic cell membrane.","definition_xrefs":["PMID:7946331","PMID:1460464","PMID:18171947","PMID:19244343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"type I terminal bouton","termid":"GO:0061174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"subsynaptic reticulum","synonyms":[{"name":"SSR","type":"exact"}],"termid":"GO:0071212"}


id: PBO:0062057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 4 pseudogene","termid":"PBO:0062057"}


id: PR:O59817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein efr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.08","synonyms":[{"name":"Spom972h-efr3","type":"exact"}],"termid":"PR:O59817"}


id: GO:0060510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a type II pneumocyte. A type II pneumocyte is a surfactant secreting cell that contains abundant cytoplasm containing numerous lipid-rich multilamellar bodies.","definition_xrefs":["GOC:mtg_lung","GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type II pneumocyte differentiation","synonyms":[{"name":"granular pneumocyte differentiation","type":"related"},{"name":"great alveolar cell differentiation","type":"exact"},{"name":"large alveolar cell differentiation","type":"related"}],"termid":"GO:0060510"}


id: PBO:0074067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 42","termid":"PBO:0074067"}


id: PBO:0110329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP3S1 pseudogene 1","termid":"PBO:0110329"}


id: PBO:0051209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-55 (pseudogene)","termid":"PBO:0051209"}


id: FYPO:0001734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which duplicated mitotic spindle pole bodies do not separate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body separation","termid":"FYPO:0001733"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0000337","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic spindle pole body separation","synonyms":[{"name":"abolished spindle pole body separation during mitotic cell cycle","type":"related"},{"name":"clustered mitotic spindle pole bodies","type":"related"},{"name":"mitotic SPB separation abolished","type":"exact"},{"name":"mitotic spindle pole body separation abolished","type":"exact"},{"name":"spindle pole body separation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001734"}


id: PBO:0120455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BNC1 antisense RNA 1","termid":"PBO:0120455"}


id: MONDO:0011108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Stüve-Wiedemann syndrome (obsolete MONDO:0011108)","termid":"MONDO:0011108","xrefs":{"Monarch":{"xref_id":"0011108"}}}


id: PBO:0090508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn2","termid":"PBO:0090508"}


id: PBO:0084063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein of the Ras superfamily; acts primarily on Sec4p, localizes to the bud site and bud tip; msb3 msb4 double mutation causes defects in secretion and actin organization; similar to the TBC-domain Tre2 oncogene; MSB4 has a paralog, MSB3, that arose from the whole genome duplication; human homolog USP6NL can complement yeast msb3 msb4 double null mutant","termid":"PBO:0084063"}


id: PBO:0076627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta induced lncRNA","termid":"PBO:0076627"}


id: MONDO:0019887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 16q is a rare chromosomal anomaly syndrome, resulting from the partial trisomy of the long arm of chromosome 16, with variable phenotype principally characterized by developmental delay, severe intellectual disability, hypotonia, facial dysmorphism (incl. high, prominent forehead, epicanthic folds, dysplastic ears, broad/depressed nasal bridge, malar hypoplasia, narrow and arched palate, thin upper lip vermilion, micrognathia) and hand/feet anomalies (e.g. arachnodactyly, talipes equinovarus). Cardiac defects, genitourinary malformations and vertebral anomalies are also associated. Thrombocytopenia and recurrent infections have also been reported.","definition_xrefs":["Orphanet:96106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of the long arm of chromosome 16","termid":"MONDO:0016966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 16q","secondary_identifiers":["SCTID:764459008","GARD:19320","UMLS:C4706934","MEDGEN:1633675"],"synonyms":[{"name":"distal duplication 16q","type":"exact"},{"name":"distal trisomy type 16q","type":"exact"},{"name":"telomeric duplication 16q","type":"exact"},{"name":"trisomy 16qter","type":"exact"}],"termid":"MONDO:0019887","xrefs":{"Monarch":{"xref_id":"0019887"}}}


id: PBO:0071801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 1B","termid":"PBO:0071801"}


id: GO:1901636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of maintenance of presynaptic active zone structure (obsolete GO:1901636)","synonyms":[{"name":"down regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"down-regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"downregulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"inhibition of maintenance of presynaptic active zone structure","type":"narrow"},{"name":"negative regulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901636"}


id: GO:0140772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + hexadecanoyl-CoA = CoA + H+ + N(6)-hexadecanoyl-L-lysyl-[protein].","definition_xrefs":["PMID:30061757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0018031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"CoA-dependent peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0140772"}


id: PBO:0065306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 23","termid":"PBO:0065306"}


id: PBO:0081382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF222 divergent transcript","termid":"PBO:0081382"}


id: MONDO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of spastic cerebral palsy characterized by increased muscle tone of the arm and leg on the same side of the body.","definition_xrefs":["NCIT:C116905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spastic cerebral palsy","termid":"MONDO:0000396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic hemiplegia","secondary_identifiers":["MEDGEN:56345","DOID:10967","icd11.foundation:1030700023","SCTID:79633009","UMLS:C0154694","ICD10CM:G81.1","ICD9:343.1","ICD9:342.10"],"synonyms":[{"name":"congenital hemiplegia","type":"related"},{"name":"hemiplegic cerebral palsy","type":"exact"},{"name":"hemiplegic infantile cerebral palsy","type":"exact"},{"name":"spastic hemiplegic cerebral palsy","type":"exact"}],"termid":"MONDO:0001168","xrefs":{"Monarch":{"xref_id":"0001168"}}}


id: GO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"positively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070760"}


id: PBO:0017778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc3","termid":"PBO:0017778"}


id: GO:2000597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of optic nerve formation","termid":"GO:2000595"},{"relation_name":"positively_regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of optic nerve formation","synonyms":[{"name":"positive regulation of CN II biosynthesis","type":"related"},{"name":"positive regulation of CN II formation","type":"related"}],"termid":"GO:2000597"}


id: MONDO:0015838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordiform uterus","secondary_identifiers":["UMLS:C0266397","MEDGEN:539891","icd11.foundation:282476394","SCTID:14689000","Orphanet:180118"],"synonyms":[{"name":"uterus arcuatus","type":"exact"},{"name":"uterus cordiformis","type":"exact"}],"termid":"MONDO:0015838","xrefs":{"Monarch":{"xref_id":"0015838"}}}


id: PBO:0054691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2100","termid":"PBO:0054691"}


id: MOD:01418
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to a methylated threonine, such as O-methyl-L-threonine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated threonine","synonyms":[{"name":"MeThr","type":"exact"}],"termid":"MOD:01418"}


id: PBO:0052146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel interacting protein 2","termid":"PBO:0052146"}


id: PBO:0017591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transmembrane transporter Thi9","termid":"PBO:0017591"}


id: GO:0048261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"negatively_regulates","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of receptor-mediated endocytosis","synonyms":[{"name":"down regulation of receptor mediated endocytosis","type":"exact"},{"name":"down-regulation of receptor mediated endocytosis","type":"exact"},{"name":"downregulation of receptor mediated endocytosis","type":"exact"},{"name":"inhibition of receptor mediated endocytosis","type":"narrow"},{"name":"negative regulation of receptor mediated endocytosis","type":"exact"}],"termid":"GO:0048261"}


id: PBO:0038619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline ceramidase 1","termid":"PBO:0038619"}


id: PBO:0088072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease component of the SAGA acetylation complex; required for SAGA (Spt-Ada-Gcn5-Acetyltransferase)-mediated deubiquitination of histone H2B","termid":"PBO:0088072"}


id: PBO:0083165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps uncharacterized ORF YER085C","termid":"PBO:0083165"}


id: FYPO:0007068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin located in heterochromatin at subtelomeric regions is higher than in wild type. In cells with increased origin firing efficiency, genomic DNA replication initiates from more origins than wild type, and is completed in more, smaller segments, than wild type.","definition_xrefs":["PMID:18093330","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased origin firing efficiency","termid":"FYPO:0001249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased origin firing efficiency in subtelomeric heterochromatin","synonyms":[{"name":"increased origin firing efficiency at subtelomeric heterochromatin","type":"exact"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased origin firing efficiency in telomeric heterochromatin","type":"related"}],"termid":"FYPO:0007068"}


id: PBO:0079461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 1","termid":"PBO:0079461"}


id: GO:0070397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["PMID:16020688","GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wall teichoic acid metabolic process","synonyms":[{"name":"WTA metabolic process","type":"exact"},{"name":"wall teichoic acid metabolism","type":"exact"}],"termid":"GO:0070397"}


id: MONDO:0100211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome with immune dysregulation","termid":"MONDO:0100210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"growth hormone insensitivity with immune dysregulation 1, autosomal recessive","secondary_identifiers":["DOID:0080836","Orphanet:220465","UMLS:C5435698","MEDGEN:1734133","NANDO:2200737","GARD:18311","OMIM:245590","SCTID:724179008","MESH:C537871"],"synonyms":[{"name":"Laron syndrome due to postreceptor defect","type":"exact"},{"name":"Laron syndrome with immunodeficiency","type":"exact"},{"name":"Laron-like syndrome","type":"exact"},{"name":"growth hormone insensitivity due to postreceptor defect","type":"exact"},{"name":"growth hormone insensitivity with immunodeficiency","type":"related"},{"name":"short stature due to STAT5b deficiency","type":"exact"}],"termid":"MONDO:0100211","xrefs":{"Monarch":{"xref_id":"0100211"}}}


id: PR:P87315
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hip3 gene.","definition_xrefs":["UniProtKB:P87315","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone transcription regulator 3 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.14c","synonyms":[{"name":"Spom972h-hip3","type":"exact"}],"termid":"PR:P87315"}


id: PR:O94309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.04","synonyms":[{"name":"Spom972h-git11","type":"exact"}],"termid":"PR:O94309"}


id: FYPO:0007341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0005311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"normal histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K4me3 during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007341"}


id: PBO:0083327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SRC1/YML034W","termid":"PBO:0083327"}


id: GO:1904088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epiboly involved in gastrulation with mouth forming second.","definition_xrefs":["PMID:24892953","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epiboly involved in gastrulation with mouth forming second","termid":"GO:1904086"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"epiboly involved in gastrulation with mouth forming second","termid":"GO:0055113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epiboly involved in gastrulation with mouth forming second","synonyms":[{"name":"activation of epiboly involved in gastrulation with mouth forming second","type":"narrow"},{"name":"up regulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"up-regulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"upregulation of epiboly involved in gastrulation with mouth forming second","type":"exact"}],"termid":"GO:1904088"}


id: PBO:0055132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2551","termid":"PBO:0055132"}


id: GO:0008965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate + protein L-histidine = pyruvate + protein N(pi)-phospho-L-histidine.","definition_xrefs":["EC:2.7.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"phosphoenolpyruvate-protein phosphotransferase activity","secondary_identifiers":["RHEA:23880","MetaCyc:2.7.3.9-RXN"],"synonyms":[{"name":"enzyme I of the phosphotransferase system","type":"narrow"},{"name":"phosphoenolpyruvate sugar phosphotransferase enzyme I activity","type":"related"},{"name":"phosphoenolpyruvate--protein phosphatase activity","type":"related"},{"name":"phosphoenolpyruvate:protein-L-histidine N-pros-phosphotransferase activity","type":"related"},{"name":"phosphoenolpyruvate:protein-L-histidine Npi-phosphotransferase activity","type":"related"},{"name":"phosphopyruvate--protein factor phosphotransferase activity","type":"related"},{"name":"phosphopyruvate--protein phosphotransferase activity","type":"related"},{"name":"sugar--PEP phosphotransferase enzyme I activity","type":"narrow"}],"termid":"GO:0008965"}


id: PBO:0075263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 16","termid":"PBO:0075263"}


id: GO:0035865
data:
  {"annotated_genes":["SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116673],"is_not":false,"summary":null,"term":"GO:0035865"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a potassium ion stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to potassium ion","termid":"GO:0035864"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to potassium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to K+ ion","type":"exact"},{"name":"cellular response to potassium","type":"exact"}],"termid":"GO:0035865","terms_by_termid":{"GO:0035865":null}}


id: GO:0110070
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane invagination at the site of separation of a multi-nucleate cell or syncytium into individual cells.","definition_xrefs":["GOC:ha","PMID:27226317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cellularization cleavage furrow","termid":"GO:0110070"}


id: FYPO:0002038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which deadenylation-independent decapping of nuclear-transcribed mRNA is abnormal. This decapping process is cleavage of the 5'-cap of a nuclear-transcribed mRNA, independent of poly(A) tail shortening. All RNA decapping may be abnormal, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["GO:0031087","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0002038"}


id: PBO:0091115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase, involved in protein processing","termid":"PBO:0091115"}


id: GO:0047817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arginine + H2O = D-ornithine + urea.","definition_xrefs":["EC:3.5.3.10","RHEA:12901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"D-arginase activity","secondary_identifiers":["KEGG_REACTION:R02458","MetaCyc:D-ARGINASE-RXN"],"synonyms":[{"name":"D-arginine amidinohydrolase activity","type":"related"}],"termid":"GO:0047817"}


id: FYPO:0002417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores and germinated spores with elongated germ tubes. The elongated cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores and germinated spores with elongated germ tubes (obsolete FYPO:0002417)","termid":"FYPO:0002417"}


id: PBO:0003296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent microtubule severing protein (predicted)","termid":"PBO:0003296"}


id: MONDO:0010330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Primary ciliary dyskinesia - retinitis pigmentosa is an X-linked ciliary dysfunction of both respiratory epithelium and photoreceptors of the retina leading to ocular disorders (mild night blindness, constriction of the visual field, and scotopic and photopic ERG responses reduced to 30-60%) associated with primary ciliary dyskinesia manifestations (chronic bronchorrhea with bronchoectasis and chronic sinusitis) and sensorineural hearing loss.","definition_xrefs":["Orphanet:247522"],"gene_count":0,"genotype_count":0,"name":"obsolete primary ciliary dyskinesia-retinitis pigmentosa syndrome (obsolete MONDO:0010330)","secondary_identifiers":["DOID:0112124","OMIM:300455","MESH:C567595"],"synonyms":[{"name":"retinitis pigmentosa, X-linked, and SINORESPIRATORY infections, with or without deafness","type":"related"}],"termid":"MONDO:0010330","xrefs":{"Monarch":{"xref_id":"0010330"}}}


id: PR:Q10346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F12.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.04c","synonyms":[{"name":"Spom972h-SPAC1F12.04c","type":"exact"}],"termid":"PR:Q10346"}


id: FYPO:0007425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion is normal (i.e. indistinguishably from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal gene conversion","synonyms":[{"name":"normal gene conversion during mitotic cell cycle","type":"related"},{"name":"normal gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0007425"}


id: PBO:0038515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 1","termid":"PBO:0038515"}


id: PBO:0044419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily W member 1","termid":"PBO:0044419"}


id: PBO:0050859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICMT divergent transcript","termid":"PBO:0050859"}


id: MONDO:0010548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia, X-linked 2","secondary_identifiers":["UMLS:C1844885","MESH:C537314","GARD:9978","MEDGEN:375535","DOID:0111830","OMIM:302600"],"synonyms":[{"name":"Scax2","type":"related"},{"name":"cerebellar ataxia with extrapyramidal involvement early-onset","type":"related"},{"name":"cerebellar ataxia with extrapyramidal involvement, early-onset","type":"related"},{"name":"spinocerebellar ataxia X-linked type 2","type":"related"},{"name":"spinocerebellar ataxia, X-linked 2","type":"exact"},{"name":"spinocerebellar ataxia, X-linked type 2","type":"exact"}],"termid":"MONDO:0010548","xrefs":{"Monarch":{"xref_id":"0010548"}}}


id: PBO:0047286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group M","termid":"PBO:0047286"}


id: PBO:0028080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_mitotic_spindles","termid":"PBO:0028080"}


id: GO:0031548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling via the brain-derived neurotrophic factor receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"regulation of BDNF receptor signaling pathway","type":"exact"},{"name":"regulation of BDNF receptor signalling pathway","type":"exact"},{"name":"regulation of brain-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0031548"}


id: PBO:0072888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding kinase family member 3","termid":"PBO:0072888"}


id: PBO:0003427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1A-like (predicted)","termid":"PBO:0003427"}


id: MOD:00739
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a cluster of iron and sulfur atoms for hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster containing modification","synonyms":[{"name":"FeSRes","type":"exact"}],"termid":"MOD:00739"}


id: FYPO:0006727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA strand elongation involved in mitotic nuclear DNA replication does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished mitotic DNA replication elongation","synonyms":[{"name":"abolished DNA strand elongation involved in mitotic DNA replication","type":"exact"},{"name":"abolished DNA strand elongation involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"abolished mitotic DNA replication elongation during mitotic cell cycle","type":"related"},{"name":"abolished mitotic DNA replication elongation during vegetative growth","type":"exact"},{"name":"mitotic DNA replication elongation abolished","type":"exact"}],"termid":"FYPO:0006727"}


id: PBO:0087355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor associated with the spliceosome; contains a U-box, a motif found in a class of ubiquitin ligases, and a WD40 domain; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087355"}


id: GO:0032538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any behavior associated with finding a host organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"host-seeking behavior","termid":"GO:0032537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of host-seeking behavior","synonyms":[{"name":"regulation of host-seeking behaviour","type":"exact"}],"termid":"GO:0032538"}


id: PBO:0074030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 18","termid":"PBO:0074030"}


id: GO:0038184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to a bile acid receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:36409000","PMID:12419312","PMID:19442546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"bile acid signaling pathway","termid":"GO:0038183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway","synonyms":[{"name":"cell surface bile acid receptor signaling pathway","type":"broad"},{"name":"membrane bile acid receptor signaling pathway","type":"related"}],"termid":"GO:0038184"}


id: SO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The polypyrimidine tract is one of the cis-acting sequence elements directing intron removal in pre-mRNA splicing.","direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine_tract","secondary_identifiers":["http://en.wikipedia.org/wiki/Polypyrimidine_tract"],"synonyms":[{"name":"polypyrimidine tract","type":"exact"}],"termid":"SO:0000612"}


id: PBO:0091536
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae TPM1","termid":"PBO:0091536"}


id: GO:0018308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient modification of lysine by pyruvate to form N6-pyruvic acid 2-iminyl-L-lysine, found in the active site of dihydrodipicolinate synthase.","definition_xrefs":["PMID:1463470","RESID:AA0287"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via N6-pyruvic acid 2-iminyl-L-lysine (obsolete GO:0018308)","synonyms":[{"name":"enzyme active site formation via N6-pyruvic acid 2-iminyl-L-lysine","type":"exact"}],"termid":"GO:0018308"}


id: MONDO:0021838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by cherubism (disorder characterized by abnormal bone tissue in the lower part of the face. Beginning in early childhood, both the lower jaw (the mandible) and the upper jaw (the maxilla) become enlarged as bone is replaced with painless, cyst-like growths.), visual impairment due to optic atrophy and short stature. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:8281276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"cherubism","termid":"MONDO:0007315"},{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy","termid":"MONDO:0020250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"Al Gazali Khidr Prem Chandran syndrome","secondary_identifiers":["GARD:586","MESH:C535616","UMLS:C2930951","MEDGEN:419678"],"synonyms":[{"name":"cherubism, optic atrophy and short stature","type":"related"}],"termid":"MONDO:0021838","xrefs":{"Monarch":{"xref_id":"0021838"}}}


id: MONDO:0007228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachymesomelia-renal syndrome","secondary_identifiers":["OMIM:113470","MEDGEN:350586","UMLS:C1862084","MESH:C537096"],"synonyms":[{"name":"brachymesomelia renal syndrome","type":"related"},{"name":"brachymesomelia-renal syndrome","type":"exact"},{"name":"severe upper limb brachymesomelia, glomerulocystic renal dysplasia, cranial and facial abnormalities, corneal opacities","type":"related"}],"termid":"MONDO:0007228","xrefs":{"Monarch":{"xref_id":"0007228"}}}


id: PBO:0039990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 4","termid":"PBO:0039990"}


id: PBO:0039828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase 2","termid":"PBO:0039828"}


id: PBO:0035851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035851"}


id: PBO:0029162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0029162"}


id: PBO:0087474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both RNase MRP and nuclear RNase P; RNase MRP cleaves pre-rRNA, while nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; binds to the RPR1 RNA subunit in RNase P","termid":"PBO:0087474"}


id: GO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + carnitine = (R)-O-acetylcarnitine + CoA.","definition_xrefs":["EC:2.3.1.7","RHEA:21136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine O-acyltransferase activity","termid":"GO:0016406"},{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"carnitine O-acetyltransferase activity","secondary_identifiers":["Reactome:R-HSA-390284","MetaCyc:CARNITINE-O-ACETYLTRANSFERASE-RXN","GO:0004093","Reactome:R-HSA-390291","GO:0004094","KEGG_REACTION:R02396"],"synonyms":[{"name":"CATC","type":"related"},{"name":"acetyl-CoA-carnitine O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:carnitine O-acetyltransferase activity","type":"related"},{"name":"acetylcarnitine transferase activity","type":"related"},{"name":"carnitine O-acetyltransferase I activity","type":"narrow"},{"name":"carnitine O-acetyltransferase II activity","type":"narrow"},{"name":"carnitine acetyl coenzyme A transferase activity","type":"related"},{"name":"carnitine acetylase activity","type":"related"},{"name":"carnitine acetyltransferase activity","type":"related"},{"name":"carnitine-acetyl-CoA transferase activity","type":"related"}],"termid":"GO:0004092"}


id: PBO:0046013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A","termid":"PBO:0046013"}


id: PBO:0045021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRAS family GTPase 1","termid":"PBO:0045021"}


id: MONDO:0008299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior column ataxia","secondary_identifiers":["UMLS:C1867923","OMIM:176250","MEDGEN:357379","MESH:C536342"],"synonyms":[{"name":"Biemond ataxia","type":"related"},{"name":"posterior column ataxia","type":"exact"}],"termid":"MONDO:0008299","xrefs":{"Monarch":{"xref_id":"0008299"}}}


id: MONDO:0100431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A migraine disorder characterized by episodes that occur in the absence of preceding focal neurological symptoms.","definition_xrefs":["NCIT:C117004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migraine disorder","termid":"MONDO:0005277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine without aura","secondary_identifiers":["ICD10CM:G43.0","icd11.foundation:2048783472","MESH:D020326","UMLS:C0338480","DOID:12783","MEDGEN:137899","SCTID:56097005"],"synonyms":[{"name":"common migraine","type":"exact"}],"termid":"MONDO:0100431","xrefs":{"Monarch":{"xref_id":"0100431"}}}


id: GO:0051079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the nuclear membranes during the first division of meiosis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane disassembly","termid":"GO:0051078"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiosis I nuclear membrane disassembly","synonyms":[{"name":"meiosis I nuclear envelope breakdown","type":"related"},{"name":"meiosis I nuclear envelope catabolism","type":"related"},{"name":"meiosis I nuclear envelope degradation","type":"related"},{"name":"meiosis I nuclear envelope disassembly","type":"related"}],"termid":"GO:0051079"}


id: GO:0035695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cells degrade mitochondria by inducing a vacuole-like structure which directly engulfs and degrades the unhealthy mitochondria by accumulating lysosomes.","definition_xrefs":["PMID:21264228","GOC:sp","GOC:bf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"mitophagy by internal vacuole formation","synonyms":[{"name":"MIV-mediated mitophagy","type":"narrow"}],"termid":"GO:0035695"}


id: PBO:0071646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 10","termid":"PBO:0071646"}


id: MOD:01451
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that converts an L-serine residue to O-phosphopantetheine-L-serine with secondary neutral loss of pantetheine resulting in O-phospho-L-serine.","definition_xrefs":["PubMed:17042494","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phosphopantetheine-L-serine","termid":"MOD:00159"},{"relation_name":"is_a","term_name":"O-phospho-L-serine","termid":"MOD:00046"},{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phospho-L-serine arising from O-phosphopantetheine-L-serine after neutral loss of pantetheine","termid":"MOD:01451"}


id: SO:0000632
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding for one gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"},{"relation_name":"is_a","term_name":"monocistronic_transcript","termid":"SO:0000665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_primary_transcript","synonyms":[{"name":"monocistronic primary transcript","type":"exact"}],"termid":"SO:0000632"}


id: MONDO:0100503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder in which the cause of the disease is a mutation in the DPH5 gene, which is characterized by craniofacial dysmorphology, profound neurodevelopmental delay, multisystem abnormalities, and miscarriages.","definition_xrefs":["PMID:35482014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"DPH5-related diphthamide-deficiency syndrome","termid":"MONDO:0100503","xrefs":{"Monarch":{"xref_id":"0100503"}}}


id: MONDO:0016015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratologic disorder associated with intrauterine exposure of phenorbarbital during the first trimester of pregnancy. Infants are usually asymptomatic but an increased risk of intellectual disability, tetralogy of Fallot, unilateral cleft lip, hypoplasia of the mitral valve and some other mild abnormalities such as hypertelorism, epicanthus, hypoplasia and low insertion of the nose, low insertion of the ears, prognathism, ﬁnger hypoplasia, brachydactyly and hypospadias have been reported in rare cases.","definition_xrefs":["Orphanet:1919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenobarbital embryopathy","secondary_identifiers":["GARD:4315","SCTID:715431002","UMLS:C4275281","MEDGEN:895102","icd11.foundation:1602901948"],"synonyms":[{"name":"phenobarbital antenatal exposure","type":"related"}],"termid":"MONDO:0016015","xrefs":{"Monarch":{"xref_id":"0016015"}}}


id: PBO:0064911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 2","termid":"PBO:0064911"}


id: GO:0035004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a phosphatidylinositol = ADP + a phosphatidylinositol 3-phosphate. This reaction is the addition of a phosphate group to phosphatidylinositol or one of its phosphorylated derivatives at the 3' position of the inositol ring.","definition_xrefs":["PMID:10209156","GOC:bf","PMID:9255069"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity (obsolete GO:0035004)","secondary_identifiers":["Wikipedia:Phosphoinositide_3-kinase"],"synonyms":[{"name":"phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0035004"}


id: MONDO:0012323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal acantholytic epidermolysis bullosa is a suprabasal subtype of epidermolysis bullosa simplex (EBS) characterized by generalized oozing erosions, usually in the absence of blisters.","definition_xrefs":["Orphanet:158687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"suprabasal epidermolysis bullosa simplex","termid":"MONDO:0015550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lethal acantholytic epidermolysis bullosa","secondary_identifiers":["UMLS:C1864826","GARD:9910","MEDGEN:400622","OMIM:609638","MESH:C535493"],"synonyms":[{"name":"EBLA","type":"related"},{"name":"LAEB","type":"exact"},{"name":"epidermolysis bullosa, lethal acantholytic","type":"related"},{"name":"lethal acantholytic epidermolysis bullosa","type":"exact"}],"termid":"MONDO:0012323","xrefs":{"Monarch":{"xref_id":"0012323"}}}


id: PBO:0111379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex, chromodomain subunit Alp13/Eaf3","termid":"PBO:0111379"}


id: PBO:0055974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 4","termid":"PBO:0055974"}


id: PBO:0036384
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by mouse SPS1","termid":"PBO:0036384"}


id: GO:0002464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction to nonself antigens in the periphery.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral tolerance induction to nonself antigen","termid":"GO:0002464"}


id: PBO:0028262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_arginine_and_cysteine","termid":"PBO:0028262"}


id: PBO:0000569
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.2.3","termid":"PBO:0000569"}


id: GO:0019111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrol + X-SO3(-) = HX + phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrol sulfotransferase activity (obsolete GO:0019111)","synonyms":[{"name":"phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0019111"}


id: PATO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration which is higher relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"concentrated","termid":"PATO:0001159"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased concentration","synonyms":[{"name":"high concentration","type":"exact"}],"termid":"PATO:0001162"}


id: PR:P0CT41
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-12 gene.","definition_xrefs":["UniProtKB:P0CT41","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-12 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.14","synonyms":[{"name":"Spom972h-Tf2-12","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT41"}


id: GO:0047695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoin = 2 benzaldehyde.","definition_xrefs":["RHEA:21460","EC:4.1.2.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzoin aldolase activity","secondary_identifiers":["KEGG_REACTION:R00027","MetaCyc:BENZOIN-ALDOLASE-RXN"],"synonyms":[{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2- activity","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase (benzaldehyde-forming)","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase activity","type":"related"},{"name":"benzaldehyde lyase activity","type":"related"},{"name":"diphenylethanone benzaldehyde-lyase activity","type":"related"}],"termid":"GO:0047695"}


id: GO:0019782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier ISG15, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016874"],"is_obsolete":false,"name":"ISG15 activating enzyme activity","synonyms":[{"name":"UBE1L","type":"narrow"}],"termid":"GO:0019782"}


id: GO:1901277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tartrate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"tartrate metabolic process","termid":"GO:1901275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tartrate biosynthetic process","synonyms":[{"name":"tartrate anabolism","type":"exact"},{"name":"tartrate biosynthesis","type":"exact"},{"name":"tartrate formation","type":"exact"},{"name":"tartrate synthesis","type":"exact"}],"termid":"GO:1901277"}


id: GO:0031543
data:
  {"annotated_genes":["SJAG_00642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75910],"is_not":false,"summary":null,"term":"GO:0031543"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:vw","PMID:24550462","GOC:mah","PMID:24550447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140096","GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptidyl-proline dioxygenase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"proline hydroxylase activity","type":"broad"},{"name":"proline,2-oxoglutarate 4-dioxygenase activity","type":"broad"},{"name":"prolyl 4-hydroxylase activity","type":"broad"},{"name":"prolyl hydroxylase activity","type":"broad"}],"termid":"GO:0031543","terms_by_termid":{"GO:0031543":null}}


id: MONDO:0018205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"1qter deletion syndrome is a chromosomal anomaly characterized by an intellectual deficiency, progressive microcephaly, seizures, growth delay, distinct facial dysmorphic features and various midline defects including cardiac, corpus callosum, gastro-oesophalgeal and urogenital anomalies.","definition_xrefs":["Orphanet:36367"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"chromosome 1q deletion","termid":"MONDO:0022756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 1q","secondary_identifiers":["SCTID:717633007","GARD:16640","MEDGEN:900126","UMLS:C4273897"],"synonyms":[{"name":"distal deletion 1q","type":"exact"},{"name":"distal monosomy type 1q","type":"exact"},{"name":"monosomy 1qter","type":"exact"},{"name":"telomeric deletion 1q","type":"exact"}],"termid":"MONDO:0018205","xrefs":{"Monarch":{"xref_id":"0018205"}}}


id: MONDO:0007637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fuchs' endothelial dystrophy in which the cause of the disease is a mutation in the COL8A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fuchs' endothelial dystrophy","termid":"MONDO:0005321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, Fuchs endothelial, 1","secondary_identifiers":["GARD:18216","MEDGEN:338172","MESH:C535478","UMLS:C1850959","OMIM:136800"],"synonyms":[{"name":"COL8A2 Fuchs' endothelial dystrophy","type":"exact"},{"name":"FECD1","type":"related"},{"name":"Fuchs' endothelial dystrophy caused by mutation in COL8A2","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, 1","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, early-onset","type":"related"},{"name":"corneal dystrophy, Fuchs endothelial, type 1","type":"exact"}],"termid":"MONDO:0007637","xrefs":{"Monarch":{"xref_id":"0007637"}}}


id: PBO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2","termid":"PBO:0090350"}


id: PBO:0068300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 6","termid":"PBO:0068300"}


id: PBO:0000351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Dre4","termid":"PBO:0000351"}


id: PBO:0040223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATE1 opposite strand, pseudogene","termid":"PBO:0040223"}


id: FYECO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin","termid":"FYECO:0000395"}


id: MONDO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A physical or cognitive mental abnormality caused by maternal alcohol consumption and its toxic effect on the developing embryo during pregnancy.","definition_xrefs":["NCIT:C92727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal alcohol spectrum disorder","termid":"MONDO:0000408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol-related birth defect","secondary_identifiers":["DOID:0050668","UMLS:C3146244","MEDGEN:459973"],"synonyms":[{"name":"ARBD","type":"exact"},{"name":"alcohol related birth defect","type":"exact"}],"termid":"MONDO:0000395","xrefs":{"Monarch":{"xref_id":"0000395"}}}


id: MONDO:0013192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloarthropathy, susceptibility to","termid":"MONDO:0024512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondyloarthropathy, susceptibility to, 3","secondary_identifiers":["DOID:0080605","MEDGEN:413852","OMIM:613238","UMLS:C2750474"],"synonyms":[{"name":"SPDA3","type":"related"},{"name":"spondyloarthropathy, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0013192","xrefs":{"Monarch":{"xref_id":"0013192"}}}


id: PBO:0077527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 241","termid":"PBO:0077527"}


id: GO:0060119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an inner ear receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell development","synonyms":[{"name":"inner ear hair cell development","type":"exact"}],"termid":"GO:0060119"}


id: MONDO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete homocarnosinosis (obsolete MONDO:0000699)","termid":"MONDO:0000699","xrefs":{"Monarch":{"xref_id":"0000699"}}}


id: GO:0004996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thyroid-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thyroid-stimulating hormone receptor activity","secondary_identifiers":["Wikipedia:Thyrotropin_receptor"],"synonyms":[{"name":"TSH receptor activity","type":"exact"},{"name":"thyroid stimulating hormone receptor activity","type":"exact"},{"name":"thyrotropin receptor","type":"exact"}],"termid":"GO:0004996"}


id: RO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concretizes","termid":"RO:0000059"}


id: MONDO:0054831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the DPF2 gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome 7","secondary_identifiers":["GARD:16287","UMLS:C4747954","OMIM:618027","MEDGEN:1648281","DOID:0112369"],"synonyms":[{"name":"COFFIN-SIRIS syndrome 7","type":"related"},{"name":"CSS7","type":"related"}],"termid":"MONDO:0054831","xrefs":{"Monarch":{"xref_id":"0054831"}}}


id: GO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Downregulation of MAP kinase activity in the context of sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK during sporulation (sensu Saccharomyces) (obsolete GO:0000206)","synonyms":[{"name":"inactivation of MAPK during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000206"}


id: MONDO:0018535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystadenocarcinoma that involves the biliary tree.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract cancer","termid":"MONDO:0003060"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"biliary cystadenocarcinoma","secondary_identifiers":["UMLS:C2064409","MEDGEN:473526","Orphanet:424982","GARD:21790"],"synonyms":[{"name":"intrahepatic bile duct cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0018535","xrefs":{"Monarch":{"xref_id":"0018535"}}}


id: GO:0003293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an endocardial cushion cell give rise to a cell that is part of a heart valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve cell differentiation","termid":"GO:0003293"}


id: PBO:0053808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1067","termid":"PBO:0053808"}


id: GO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of polysaccharides by salivary amylase. Salivary amylase is released by salivary glands, usually in the mouth.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete salivary polysaccharide catabolic process (obsolete GO:0044239)","synonyms":[{"name":"salivary polysaccharide breakdown","type":"exact"},{"name":"salivary polysaccharide catabolism","type":"exact"},{"name":"salivary polysaccharide degradation","type":"exact"}],"termid":"GO:0044239"}


id: GO:0032490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a molecule of bacterial origin is received and converted into a molecular signal.","definition_xrefs":["GOC:add","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of molecule of bacterial origin","synonyms":[{"name":"detection of bacteria associated molecule","type":"exact"},{"name":"detection of bacterial associated molecule","type":"exact"},{"name":"detection of bacterium associated molecule","type":"exact"}],"termid":"GO:0032490"}


id: GO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response taking place in mucosal tissues, including those of the intestinal tract, nasal and upper respiratory tract, and genital tract.","definition_xrefs":["ISBN:0781735149","GOC:jal","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ or tissue specific immune response","termid":"GO:0002251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosal immune response","secondary_identifiers":["GO:0002422","GO:0002386"],"synonyms":[{"name":"immune response in MALT","type":"narrow"},{"name":"immune response in mucosal-associated lymphoid tissue","type":"narrow"},{"name":"immune response in urogenital tract","type":"narrow"}],"termid":"GO:0002385"}


id: PBO:0004271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps33","termid":"PBO:0004271"}


id: PR:P87314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein hir1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.13c","synonyms":[{"name":"Spom972h-hip1","type":"exact"},{"name":"histone transcription regulator 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87314"}


id: GO:1990086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a lens fiber cell. Lens fiber cells are elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["PMID:11095619","CL:0011004","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell apoptotic process","termid":"GO:1990086"}


id: PBO:0076431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 7","termid":"PBO:0076431"}


id: PBO:0109653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory MKL1 (MRTFA) interacting lncRNA","termid":"PBO:0109653"}


id: MONDO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bursitis that involves the olecranon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enthesopathy","termid":"MONDO:0002183"},{"relation_name":"is_a","term_name":"bursitis","termid":"MONDO:0002471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olecranon bursitis","secondary_identifiers":["DOID:12581","UMLS:C0263962","MEDGEN:538225","ICD10CM:M70.2","ICD9:726.33","SCTID:425940002"],"synonyms":[{"name":"Miners' elbow","type":"exact"},{"name":"bursitis of elbow","type":"exact"},{"name":"bursitis of elbow region","type":"exact"},{"name":"bursitis of olecranon","type":"exact"},{"name":"capped elbow","type":"exact"},{"name":"elbow bursitis","type":"exact"},{"name":"elbow bursitis (& olecranon)","type":"exact"},{"name":"miner's elbow","type":"exact"},{"name":"olecranon bursitis","type":"exact"},{"name":"shoe boil","type":"exact"}],"termid":"MONDO:0001557","xrefs":{"Monarch":{"xref_id":"0001557"}}}


id: PBO:0070569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 35","termid":"PBO:0070569"}


id: GO:0008710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + H+ + pimelyl-CoA = 8-amino-7-oxononanoate + CO2 + CoA.","definition_xrefs":["RHEA:20712","EC:2.3.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-amino-7-oxononanoate synthase activity","secondary_identifiers":["KEGG_REACTION:R03210","MetaCyc:7KAPSYN-RXN"],"synonyms":[{"name":"6-carboxyhexanoyl-CoA:L-alanine C-carboxyhexanoyltransferase (decarboxylating)","type":"related"},{"name":"7-KAP synthetase activity","type":"related"},{"name":"7-keto-8-amino-pelargonic acid synthetase activity","type":"related"},{"name":"7-keto-8-aminopelargonic acid synthetase activity","type":"related"},{"name":"7-keto-8-aminopelargonic synthetase activity","type":"related"},{"name":"8-amino-7-ketopelargonate synthase activity","type":"related"},{"name":"8-amino-7-oxopelargonate synthase activity","type":"related"},{"name":"AONS activity","type":"related"}],"termid":"GO:0008710"}


id: PBO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U17","termid":"PBO:0002034"}


id: PR:O94587
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protein COX18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12428:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein cox18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.15c","secondary_identifiers":["UniProtKB:O94587"],"synonyms":[{"name":"SPCC1442.15c","type":"related"},{"name":"Sp3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COX18","type":"exact"},{"name":"cox18sp+ (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oxa1-3","type":"related"},{"name":"oxa103","type":"related"}],"termid":"PR:O94587"}


id: PBO:0002720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn1","termid":"PBO:0002720"}


id: MONDO:0004328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the maxillary sinus. It is classified as intestinal-type or non-intestinal-type adenocarcinoma. Nasal obstruction and epistaxis are the presenting signs.","definition_xrefs":["NCIT:C6240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maxillary sinus carcinoma","termid":"MONDO:0001748"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"maxillary sinus adenocarcinoma","secondary_identifiers":["MEDGEN:233167","SCTID:707339009","DOID:7684","UMLS:C1334642"],"synonyms":[{"name":"adenocarcinoma of maxillary sinus","type":"related"},{"name":"adenocarcinoma of the maxillary sinus","type":"exact"},{"name":"maxillary sinus adenocarcinoma","type":"exact"}],"termid":"MONDO:0004328","xrefs":{"Monarch":{"xref_id":"0004328"}}}


id: GO:0004176
data:
  {"annotated_genes":["SJAG_01179","SJAG_01816","SJAG_00984"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65431,74284,80065],"is_not":false,"summary":null,"term":"GO:0004176"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00984":null,"SJAG_01179":null,"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0008233","GO:0140096"],"is_obsolete":false,"name":"ATP-dependent peptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9839146","Reactome:R-HSA-9839113","Reactome:R-HSA-9838289","GO:0004280","Reactome:R-HSA-9698929","Reactome:R-HSA-9839105","Reactome:R-HSA-9838081","Reactome:R-HSA-9838004","Reactome:R-HSA-9839751","Reactome:R-HSA-9839059"],"synonyms":[{"name":"ATP-dependent proteolysis","type":"related"}],"termid":"GO:0004176","terms_by_termid":{"GO:0004176":null}}


id: MOD:01224
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["OMSSA:40","PubMed:3155470","Unimod:126#K","PubMed:957432","PubMed:11710128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-sulfanylpropanoyl (N-term and Lys)","termid":"MOD:00497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioacylation of primary amines - site K","synonyms":[{"name":"3,3-Dithio-bis-(sulfosuccinimidyl)propionate","type":"related"},{"name":"Thioacyl","type":"related"},{"name":"thioacetylk","type":"exact"},{"name":"thioacylation of primary amines (N-term and Lys)","type":"related"}],"termid":"MOD:01224"}


id: GO:0071093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to fibronectin and tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha5-beta1 integrin-fibronectin-tissue transglutaminase complex","synonyms":[{"name":"ITGA5-ITGB1-FN1-TGM2 complex","type":"narrow"}],"termid":"GO:0071093"}


id: MONDO:0006171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete conjunctival melanoma (obsolete MONDO:0006171)","termid":"MONDO:0006171","xrefs":{"Monarch":{"xref_id":"0006171"}}}


id: PBO:0012046
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processive helicase activity of Mcm4/6/7 complex requires 3' and 5' overhangs","termid":"PBO:0012046"}


id: PBO:0116252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane leptomycin transmembrane transporter Pmd1","termid":"PBO:0116252"}


id: PBO:0048756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate reductase 1 homolog","termid":"PBO:0048756"}


id: FYPO:0009105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the divided nuclei are mislocalized during telophase of the mitotic cell cycle.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"mislocalized nucleus during mitotic telophase","synonyms":[{"name":"abnormal nuclei location during mitotic telophase","type":"exact"},{"name":"abnormal nucleus location during mitotic telophase","type":"exact"},{"name":"abnormal nucleus position during mitotic telophase","type":"exact"},{"name":"abnormal nucleus positioning during mitotic telophase","type":"exact"},{"name":"mislocalised nuclei during mitotic telophase","type":"exact"},{"name":"mislocalised nucleus during mitotic telophase","type":"exact"}],"termid":"FYPO:0009105"}


id: PBO:0060145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription rescue factor 1","termid":"PBO:0060145"}


id: GO:0018538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the generic reaction: epoxide + CO2 + NAD+ + electron donor = beta-keto acid + NADH + reduced electron donor; the electron donor may be NADPH or a dithiol. This reaction is the ring opening and carboxylation of an epoxide; for example: epoxypropane + CO2 + NAD+ + NADPH = acetoacetate + NADH + NADP+.","definition_xrefs":["PMID:9555888"],"gene_count":0,"genotype_count":0,"name":"obsolete epoxide carboxylase activity (obsolete GO:0018538)","termid":"GO:0018538"}


id: PBO:0069553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 824, pseudogene","termid":"PBO:0069553"}


id: PBO:0052771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 63","termid":"PBO:0052771"}


id: MONDO:0013637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary biliary cholangitis","termid":"MONDO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"primary biliary cholangitis 5","secondary_identifiers":["OMIM:614221","MEDGEN:481832","DOID:0070362","GARD:15777","UMLS:C3280202"],"synonyms":[{"name":"PBC5","type":"related"},{"name":"biliary cirrhosis, primary, 5","type":"related"}],"termid":"MONDO:0013637","xrefs":{"Monarch":{"xref_id":"0013637"}}}


id: MONDO:0003372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the vulva. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C40318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar leiomyosarcoma","secondary_identifiers":["MEDGEN:378348","EFO:1001975","DOID:5286","UMLS:C2168304"],"synonyms":[{"name":"leiomyosarcoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003372","xrefs":{"Monarch":{"xref_id":"0003372"}}}


id: MONDO:1011431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gaucher disease, non-human animal","secondary_identifiers":["OMIA:000405"],"termid":"MONDO:1011431","xrefs":{"Monarch":{"xref_id":"1011431"}}}


id: GO:0009163
data:
  {"annotated_genes":["SJAG_03096","SJAG_01859","SJAG_00134","SJAG_03881","SJAG_00044","SJAG_04264","SJAG_02179","SJAG_00694","SJAG_01781","SJAG_01070","SJAG_05029","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[118837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[71803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[71804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[71805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[100535,100536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[68053,75328,95706,62731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[115813,99686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[75214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["ISBN:0140512713","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule biosynthetic process","termid":"GO:0034404"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside anabolism","type":"exact"},{"name":"nucleoside biosynthesis","type":"exact"},{"name":"nucleoside formation","type":"exact"},{"name":"nucleoside synthesis","type":"exact"}],"termid":"GO:0009163","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0043097":null,"GO:0043174":null,"GO:0046086":null,"GO:0046132":null,"GO:0071590":null,"GO:0071592":null}}


id: FYPO:0002198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but have abnormal cell shape, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable vegetative cell population with abnormal cell shape (obsolete FYPO:0002198)","synonyms":[{"name":"viable, abnormally shaped vegetative cell population","type":"exact"}],"termid":"FYPO:0002198"}


id: PBO:0030645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_pH","termid":"PBO:0030645"}


id: PBO:0070602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 70","termid":"PBO:0070602"}


id: GO:0032671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-27 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-27 production","termid":"GO:0032631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-27 production","secondary_identifiers":["GO:0045531"],"synonyms":[{"name":"regulation of IL-27 production","type":"exact"},{"name":"regulation of interleukin-27 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-27 formation","type":"narrow"},{"name":"regulation of interleukin-27 synthesis","type":"narrow"}],"termid":"GO:0032671"}


id: PBO:0035903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylation_during_vegetative_growth","termid":"PBO:0035903"}


id: GO:0010538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulates the activity of the Hsp27 molecular chaperone.","definition_xrefs":["GOC:tb","PMID:11546764","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp27 protein regulator activity (obsolete GO:0010538)","synonyms":[{"name":"Hsp27 protein regulator activity","type":"exact"}],"termid":"GO:0010538"}


id: PBO:0027967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_telomere","termid":"PBO:0027967"}


id: PBO:0075281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin family member 21","termid":"PBO:0075281"}


id: MONDO:0016084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Crigler-Najjar syndrome (obsolete MONDO:0016084)","termid":"MONDO:0016084","xrefs":{"Monarch":{"xref_id":"0016084"}}}


id: PBO:0027481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_reactive_oxygen_species_level_during_G0","termid":"PBO:0027481"}


id: GO:0043671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner part of the exine, which stains.","definition_xrefs":["PMID:28904424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endexine","termid":"GO:0043671"}


id: PBO:0116657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 4A","termid":"PBO:0116657"}


id: PBO:0055791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LOXL1 antisense RNA 1","termid":"PBO:0055791"}


id: MONDO:1012616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inherited microphthalmia that occurs in female chickens.","definition_xrefs":["PMID:1578107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, chicken","termid":"MONDO:1011237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia-4, chicken","secondary_identifiers":["OMIA:000650-9031"],"termid":"MONDO:1012616","xrefs":{"Monarch":{"xref_id":"1012616"}}}


id: PBO:0005492
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.4","termid":"PBO:0005492"}


id: GO:1901711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of homoserine biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of homoserine biosynthetic process","termid":"GO:1901710"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"homoserine biosynthetic process","termid":"GO:0009090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of homoserine biosynthetic process","synonyms":[{"name":"down regulation of homoserine anabolism","type":"exact"},{"name":"down regulation of homoserine biosynthesis","type":"exact"},{"name":"down regulation of homoserine biosynthetic process","type":"exact"},{"name":"down regulation of homoserine formation","type":"exact"},{"name":"down regulation of homoserine synthesis","type":"exact"},{"name":"down-regulation of homoserine anabolism","type":"exact"},{"name":"down-regulation of homoserine biosynthesis","type":"exact"},{"name":"down-regulation of homoserine biosynthetic process","type":"exact"},{"name":"down-regulation of homoserine formation","type":"exact"},{"name":"down-regulation of homoserine synthesis","type":"exact"},{"name":"downregulation of homoserine anabolism","type":"exact"},{"name":"downregulation of homoserine biosynthesis","type":"exact"},{"name":"downregulation of homoserine biosynthetic process","type":"exact"},{"name":"downregulation of homoserine formation","type":"exact"},{"name":"downregulation of homoserine synthesis","type":"exact"},{"name":"inhibition of homoserine anabolism","type":"exact"},{"name":"inhibition of homoserine biosynthesis","type":"exact"},{"name":"inhibition of homoserine biosynthetic process","type":"narrow"},{"name":"inhibition of homoserine formation","type":"exact"},{"name":"inhibition of homoserine synthesis","type":"exact"},{"name":"negative regulation of homoserine anabolism","type":"exact"},{"name":"negative regulation of homoserine biosynthesis","type":"exact"},{"name":"negative regulation of homoserine formation","type":"exact"},{"name":"negative regulation of homoserine synthesis","type":"exact"}],"termid":"GO:1901711"}


id: PBO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies2","termid":"PBO:0001540"}


id: PR:O13999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug155 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 155 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.04c","synonyms":[{"name":"Spom972h-mug155","type":"exact"}],"termid":"PR:O13999"}


id: GO:0034838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (-)-(2S,5R)-menthone + NAD+ = (5R)-menth-2-enone + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete menthone dehydrogenase activity (obsolete GO:0034838)","termid":"GO:0034838"}


id: PBO:0113248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl homoserine-O-acetyl serine sulfhydrylase; involved in methionine and cysteine biosynthesis; long considered essential for inorganic sulfur assimilation, but inefficient homocysteine synthase Hsu1p enables met17 null cells to assimilate enough inorganic sulfur for survival and proliferation; growth failure of met17 null can be explained by toxic accumulation of H2S gas due to a metabolic bottleneck","termid":"PBO:0113248"}


id: PBO:0068338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF103-CHMP3 readthrough","termid":"PBO:0068338"}


id: PBO:0057896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3199-1","termid":"PBO:0057896"}


id: GO:0046886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"positively_regulates","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone biosynthetic process","synonyms":[{"name":"activation of hormone biosynthetic process","type":"narrow"},{"name":"positive regulation of hormone anabolism","type":"exact"},{"name":"positive regulation of hormone biosynthesis","type":"exact"},{"name":"positive regulation of hormone formation","type":"exact"},{"name":"positive regulation of hormone synthesis","type":"exact"},{"name":"stimulation of hormone biosynthetic process","type":"narrow"},{"name":"up regulation of hormone biosynthetic process","type":"exact"},{"name":"up-regulation of hormone biosynthetic process","type":"exact"},{"name":"upregulation of hormone biosynthetic process","type":"exact"}],"termid":"GO:0046886"}


id: PR:Q10148
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tls1 gene.","definition_xrefs":["UniProtKB:Q10148","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.01","synonyms":[{"name":"Spom972h-tls1","type":"exact"}],"termid":"PR:Q10148"}


id: PBO:0061604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleobindin 1","termid":"PBO:0061604"}


id: GO:0070022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A homodimeric receptor complex that consists of two TGF-beta receptor monomers.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor complex (obsolete GO:0070022)","synonyms":[{"name":"TGF-beta receptor complex","type":"broad"},{"name":"transforming growth factor beta receptor complex","type":"exact"}],"termid":"GO:0070022"}


id: PR:Q9Y7S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C569.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.05c","synonyms":[{"name":"Spom972h-SPCC569.05c","type":"exact"}],"termid":"PR:Q9Y7S4"}


id: MONDO:0023679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hematohidrosis is a rare condition characterized by blood oozing from intact skin and mucosa. Signs and symptoms include sweating blood, crying bloody tears, bleeding from the nose, bleeding from the ears, or oozing bloodfrom other skin surfaces. The episodes are usually self-limiting.","definition_xrefs":["GARD:0013131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hematohidrosis","secondary_identifiers":["SCTID:238757003","GARD:13131","ICD9:705.89","MEDGEN:633305","UMLS:C0473554"],"synonyms":[{"name":"Hematidrosis","type":"related"},{"name":"Hematohidrosis","type":"related"}],"termid":"MONDO:0023679","xrefs":{"Monarch":{"xref_id":"0023679"}}}


id: PBO:0076720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohyalin","termid":"PBO:0076720"}


id: PBO:0083287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in other Saccharomyces species; overlaps the verified gene GPD1; deletion confers sensitivity to GSAO; deletion in cyr1 mutant results in loss of stress resistance","termid":"PBO:0083287"}


id: GO:0010334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans,trans-farnesyl diphosphate = a sesquiterpene + diphosphate. Sesquiterpenes are terpenes containing three isoprene units, i.e. 15 carbons.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sesquiterpene synthase activity","termid":"GO:0010334"}


id: GO:0103016
data:
  {"annotated_genes":["SJAG_01302","SJAG_00358","SJAG_03932"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96215,107828,110391],"is_not":false,"summary":null,"term":"GO:0103016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + ATP + S-sulfanyl-L-cysteinyl-[protein] + uridine(34) in tRNA = 2-thiouridine(34) in tRNA + A + AMP + diphosphate + H+ + L-cysteinyl-[protein].","definition_xrefs":["RHEA:47032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_01302":null,"SJAG_03932":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0016782","GO:0003824","GO:0140098","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"tRNA-uridine 2-sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-2023","EC:2.8.1.13"],"synonyms":[{"name":"tRNA-specific 2-thiouridylase activity","type":"related"},{"name":"tRNA-uracil-34 sulfurtransferase activity","type":"related"}],"termid":"GO:0103016","terms_by_termid":{"GO:0103016":null}}


id: GO:0009199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonucleoside triphosphate metabolic process (obsolete GO:0009199)","synonyms":[{"name":"ribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009199"}


id: GO:0060585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of prostaglandin-endoperoxide synthase activity (obsolete GO:0060585)","synonyms":[{"name":"positive regulation of (PG)H synthase activity","type":"related"},{"name":"positive regulation of PG synthetase activity","type":"related"},{"name":"positive regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"positive regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060585"}


id: GO:0098022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of capsid decoration composed of fiber structures.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, decoration","termid":"GO:0098021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, fiber","synonyms":[{"name":"head/capsid fiber","type":"related"}],"termid":"GO:0098022"}


id: PBO:0034517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_unattached_kinetochores","termid":"PBO:0034517"}


id: PBO:0089205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex32","termid":"PBO:0089205"}


id: MONDO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, IIA 17","secondary_identifiers":["OMIM:619909","UMLS:C5676999","MEDGEN:1809583"],"synonyms":[{"name":"PCH17","type":"exact"},{"name":"pontocerebellar hypoplasia, IIA 17","type":"exact"}],"termid":"MONDO:0030890","xrefs":{"Monarch":{"xref_id":"0030890"}}}


id: PBO:0002865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR56 (predicted)","termid":"PBO:0002865"}


id: PBO:0080145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 1","termid":"PBO:0080145"}


id: PBO:0068956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 200, pseudogene","termid":"PBO:0068956"}


id: PBO:0044507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 3","termid":"PBO:0044507"}


id: PATO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000221 urination (obsolete PATO:0000221)","termid":"PATO:0000221"}


id: PBO:0076819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 2","termid":"PBO:0076819"}


id: MONDO:0041161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A proliferation of the endometrial cells resulting in glandular enlargement and budding. The proliferation may or may not be associated with atypia of the endometrial cells. When the hyperplastic changes are excessive, there is formation of complex epithelial structures (complex endometrial hyperplasia).","definition_xrefs":["NCIT:C3013"],"gene_count":0,"genotype_count":0,"name":"obsolete endometrial hyperplasia (obsolete MONDO:0041161)","secondary_identifiers":["MESH:D004714","SCTID:237072009","DOID:0080365","HP:0040298"],"synonyms":[{"name":"endometrial hyperplasia","type":"exact"},{"name":"hyperplasia of endometrium","type":"exact"},{"name":"hyperplasia of the endometrium","type":"exact"}],"termid":"MONDO:0041161","xrefs":{"Monarch":{"xref_id":"0041161"}}}


id: PBO:0084143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity glucose transporter of the major facilitator superfamily; expression is induced by low levels of glucose and repressed by high levels of glucose","termid":"PBO:0084143"}


id: PBO:0088761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1","termid":"PBO:0088761"}


id: PBO:0108900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 13","termid":"PBO:0108900"}


id: PBO:0004497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Nca2 (predicted)","termid":"PBO:0004497"}


id: PBO:0036169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_methylation_during_vegetative_growth","termid":"PBO:0036169"}


id: MONDO:1011842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granule cell type cerebellar hypoplasia, non-human animal","secondary_identifiers":["OMIA:000427"],"termid":"MONDO:1011842","xrefs":{"Monarch":{"xref_id":"1011842"}}}


id: GO:0102096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-6-deoxy-beta-L-mannose + N-acetyl-alpha-D-glucosaminyl-diphospho-trans,octacis-decaprenol = dTDP(3-) + alpha-L-Rhap-(1->3)-alpha-D-GlcpNAc-1-diphospho-trans,octacis-decaprenol + H+.","definition_xrefs":["EC:2.4.1.289","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"decaprenyl-N-acetyl-alpha-D-glucosaminyl-pyrophosphate:dTDP-alpha-L-rhamnose rhamnosyltransferase activity","secondary_identifiers":["RHEA:34487","MetaCyc:RXN-11070"],"termid":"GO:0102096"}


id: RO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some contributing role that influences the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_condition","termid":"RO:0003304"}


id: PBO:0120107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein tyrosine phosphatase; contains phosphatase activity using the non-specific phosphatase substrate, pNPP, and is inhibited by sodium orthovanadate; required for cell cycle arrest in response to oxidative damage of DNA","termid":"PBO:0120107"}


id: FYPO:0006202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydroxyurea","synonyms":[{"name":"normal RNA accumulation during cellular response to hydroxyurea","type":"related"},{"name":"normal RNA level during cellular response to HU","type":"exact"},{"name":"normal RNA level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydroxyurea","type":"narrow"},{"name":"normal transcript level during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006202"}


id: MONDO:0007631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition caused by a 520 kb deletion at 16p12.1. It is characterized by developmental delay, craniofacial dysmorphology and congenital heart defects.","definition_xrefs":["NCIT:C129875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16p12.1 deletion syndrome, 520kb","secondary_identifiers":["OMIM:136570","DOID:0060399","DECIPHER:92","MEDGEN:460626","MESH:C565001","UMLS:C3149276"],"synonyms":[{"name":"Recurrent 16p12.1 microdeletion (neurodevelopmental susceptibility locus)","type":"exact"},{"name":"chromosome 16p12.1 deletion syndrome","type":"exact"},{"name":"chromosome 16p12.1 deletion syndrome, 520-KB","type":"related"},{"name":"chromosome 16p12.1 deletion syndrome, type 520kb","type":"exact"},{"name":"fragile site 16P12","type":"related"},{"name":"fragile site, Distamycin a type, Rare, fra(16)(p12.1)","type":"related"}],"termid":"MONDO:0007631","xrefs":{"Monarch":{"xref_id":"0007631"}}}


id: GO:0015538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sialate(out) + H+(out) = sialate(in) + H+(in).","definition_xrefs":["TC:2.A.1.12.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sialic acid:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-25","Reactome:R-HSA-428585","Reactome:R-HSA-5624239","RHEA:28987"],"synonyms":[{"name":"sialic acid permease activity","type":"related"},{"name":"sialic acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015538"}


id: PBO:0017768
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cruciform Cutting Endonuclease","termid":"PBO:0017768"}


id: PBO:0114529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-Y, phosphatidylinositol N-acetylglucosaminyltransferase subunit","termid":"PBO:0114529"}


id: MONDO:0001495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemorrhage into a canal or cavity of the body, such as the space covered by the serous membrane (tunica vaginalis) around the testis leading to testicular hematocele or scrotal hematocele.","definition_xrefs":["MESH:D006398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematocele of tunica vaginalis testis","secondary_identifiers":["MEDGEN:42386","DOID:12332","SCTID:66259004","UMLS:C0018931"],"synonyms":[{"name":"hematocele","type":"exact"},{"name":"male hematocele","type":"exact"}],"termid":"MONDO:0001495","xrefs":{"Monarch":{"xref_id":"0001495"}}}


id: MONDO:0019115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanocortin 4 receptor (MC4R) deficiency is the commonest form of monogenic obesity identified so far. MC4R deficiency is characterized by severe obesity, an increase in lean body mass and bone mineral density, increased linear growth in early childhood, hyperphagia beginning in the first year of life and severe hyperinsulinaemia, in the presence of preserved reproductive function.","definition_xrefs":["Orphanet:71529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity due to melanocortin 4 receptor deficiency","secondary_identifiers":["GARD:16690","MEDGEN:903905","SCTID:717269008","NCIT:C120394","UMLS:C4273958"],"synonyms":[{"name":"MC4R deficiency","type":"exact"}],"termid":"MONDO:0019115","xrefs":{"Monarch":{"xref_id":"0019115"}}}


id: MONDO:0010459
data:
  {"annotated_genes":["SJAG_07000"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88821],"is_not":false,"summary":null,"term":"MONDO:0010459"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the UBQLN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060206","GARD:15269","MEDGEN:477090","OMIM:300857","UMLS:C3275459"],"synonyms":[{"name":"ALS15","type":"exact"},{"name":"UBQLN2 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 15","type":"exact"},{"name":"amyotrophic lateral sclerosis 15 with or without frontotemporal dementia","type":"related"},{"name":"amyotrophic lateral sclerosis 15, with or without frontotemporal dementia","type":"exact"},{"name":"amyotrophic lateral sclerosis 15, with or without frontotemporal dementia, X-linked dominant","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in UBQLN2","type":"exact"},{"name":"amyotrophic lateral sclerosis type 15","type":"exact"}],"termid":"MONDO:0010459","terms_by_termid":{"MONDO:0010459":null},"xrefs":{"Monarch":{"xref_id":"0010459"}}}


id: PBO:0088173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylitol dehydrogenase; involved in utilization of xylose as a carbon source; not present in S288C, but located in a 65kb insertion on the right arm of chromosome XV in many wine strains such as EC1118 and AWRI1631","termid":"PBO:0088173"}


id: PATO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An action potential which is relatively low.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001660 decreased action potential (obsolete PATO:0001660)","synonyms":[{"name":"low action potential","type":"exact"}],"termid":"PATO:0001660"}


id: GO:0004376
data:
  {"annotated_genes":["SJAG_00295","SJAG_03878","SJAG_05327","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180041"},{"annotations":[93173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120563"},{"annotations":[117210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120564"},{"annotations":[100050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120565"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-mannosyl residue from dolichol-P-mannose to GlcN-acyl-PI bearing 0-3 mannoses during formation of the GPI precursor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_03115":null,"SJAG_03878":null,"SJAG_05327":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"GPI mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162821","Reactome:R-HSA-162873","GO:0004580"],"synonyms":[{"name":"glycolipid mannosyl transferase activity","type":"exact"},{"name":"glycolipid mannosyltransferase activity","type":"broad"}],"termid":"GO:0004376","terms_by_termid":{"GO:0120563":null,"GO:0120564":null,"GO:0120565":null,"GO:0180041":null}}


id: GO:0102117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A9 + S-adenosyl-L-methionine = gibberellin A9 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"gibberellin A9 carboxyl methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11358","RHEA:36119"],"termid":"GO:0102117"}


id: MONDO:0800132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder characterized by severe anemia and thrombocytopenia apparent from early infancy, hepatosplenomegaly, and recurrent fevers associated with a hyperinflammatory state. Additional systemic features may include chronic diarrhea, proteinuria with renal disease, liver fibrosis with elevated liver enzymes, deforming arthropathy, and vasculitic skin lesions. Some patients may have motor delay or learning difficulties associated with subcortical white matter lesions on brain imaging. Laboratory studies show increased levels of proinflammatory cytokines and increased expression of interferon-stimulated genes (ISGs), consistent with a type I interferonopathy.","definition_xrefs":["OMIM:619858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory-pancytopenia syndrome due to DNASE2 deficiency","secondary_identifiers":["UMLS:C5676977","MEDGEN:1803642"],"termid":"MONDO:0800132","xrefs":{"Monarch":{"xref_id":"0800132"}}}


id: PBO:0091345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane potassium ion/proton antiporter Kha1","termid":"PBO:0091345"}


id: SO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA that is transcribed from a long terminal repeat.","definition_xrefs":["PMID:24256266","PomBase:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long_terminal_repeat_transcript","synonyms":[{"name":"LTR transcript","type":"exact"},{"name":"long terminal repeat transcript","type":"exact"}],"termid":"SO:0002208"}


id: PBO:0043960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma E, pseudogene","termid":"PBO:0043960"}


id: PBO:0073008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 8","termid":"PBO:0073008"}


id: GO:0033246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of penicillin metabolic process","termid":"GO:0033244"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"penicillin metabolic process","termid":"GO:0042316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of penicillin metabolic process","synonyms":[{"name":"positive regulation of penicillin metabolism","type":"exact"}],"termid":"GO:0033246"}


id: MONDO:0010240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete androgen insensitivity syndrome (obsolete MONDO:0010240)","termid":"MONDO:0010240","xrefs":{"Monarch":{"xref_id":"0010240"}}}


id: GO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a plasmacytoid dendritic cell resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["PMID:16174109","GOC:add","PMID:15990333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell activation","termid":"GO:0002270"}


id: PBO:0090394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb2","termid":"PBO:0090394"}


id: PBO:0109462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L50","termid":"PBO:0109462"}


id: PBO:0078020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 10","termid":"PBO:0078020"}


id: PBO:0017497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transmembrane transporter (predicted)","termid":"PBO:0017497"}


id: PBO:0080236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitelline membrane outer layer 1 homolog","termid":"PBO:0080236"}


id: PBO:0043110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of inhibitor of nuclear factor kappa B kinase complex","termid":"PBO:0043110"}


id: PBO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Binding Upb Nine of 107 kDa","termid":"PBO:0000347"}


id: MONDO:0009615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methylmalonic acidemia due to methylmalonyl-CoA epimerase deficiency is a rare inborn error of metabolism disease characterized by mild to moderate, persistent elevation of methylmalonic acid in plasma, urine and cerebrospinal fluid. Clinical presentation may include acute metabolic decompensation with metabolic acidosis (presenting with vomiting, dehydration, confusion, hallucinations), nonspecific neurological symptoms, or may also be asymptomatic.","definition_xrefs":["Orphanet:308425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"methylmalonic acidemia due to methylmalonyl-CoA epimerase deficiency","secondary_identifiers":["UMLS:C1855100","MEDGEN:344419","MESH:C565386","OMIM:251120","SCTID:765137006","GARD:17390"],"synonyms":[{"name":"MCEE deficiency","type":"exact"},{"name":"methylmalonic acidemia due to methylmalonyl-CoA epimerase deficiency","type":"exact"},{"name":"methylmalonic acidemia due to methylmalonyl-CoA racemase deficiency","type":"exact"},{"name":"methylmalonic aciduria III","type":"related"},{"name":"methylmalonic aciduria III, formerly","type":"related"},{"name":"methylmalonic aciduria due to methylmalonyl-CoA epimerase deficiency","type":"exact"},{"name":"methylmalonic aciduria due to methylmalonyl-CoA racemase deficiency","type":"exact"},{"name":"methylmalonyl-CoA epimerase deficiency","type":"related"},{"name":"methylmalonyl-Coa epimerase deficiency with sepiapterin reductase deficiency","type":"related"},{"name":"methylmalonyl-Coa racemase deficiency","type":"related"}],"termid":"MONDO:0009615","xrefs":{"Monarch":{"xref_id":"0009615"}}}


id: FYPO:0001580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing leucine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on leucine nitrogen source","synonyms":[{"name":"normal cell population growth on leucine nitrogen source","type":"exact"},{"name":"normal cell population growth on monomeric leucine nitrogen source","type":"exact"},{"name":"normal leucine utilization","type":"related"},{"name":"normal monomeric leucine utilization","type":"related"},{"name":"normal vegetative cell population growth on leucine nitrogen source","type":"exact"}],"termid":"FYPO:0001580"}


id: PBO:0085245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (PPIase); binds to FK506 and rapamycin; also binds to the nonhistone chromatin binding protein Hmo1p and may regulate its assembly or function; associates with promoters of ribosomal protein genes; acts as chaperone to prevent protein aggregation; N-terminally propionylated in vivo; mutation is functionally complemented by human FKBP1A","termid":"PBO:0085245"}


id: PBO:0068926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 169, pseudogene","termid":"PBO:0068926"}


id: FYPO:0008294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Endoplasmic Reticulum tethering to the plasma membrane is normal. Normal ER to plasma membrane tethering results in correct localization of the ER.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal endoplasmic reticulum localization","termid":"FYPO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal plasma membrane-ER tethering","termid":"FYPO:0008294"}


id: PATO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000723 high yield (obsolete PATO:0000723)","termid":"PATO:0000723"}


id: PBO:0018032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synviolin family ubiquitin-protein ligase E3, Hrd1","termid":"PBO:0018032"}


id: FYPO:0004577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:25398909","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3-K9 trimethylation at subtelomere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased subtelomeric histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004577"}


id: GO:0140779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of XCL1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:7973732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"XCL1 production","secondary_identifiers":["Wikipedia:XCL1"],"synonyms":[{"name":"lymphotactin production","type":"exact"}],"termid":"GO:0140779"}


id: GO:0032040
data:
  {"annotated_genes":["SJAG_00538","SJAG_03654","SJAG_02702","SJAG_02024","SJAG_04069","SJAG_02608","SJAG_02662","SJAG_03341","SJAG_00744","SJAG_04033","SJAG_03028","SJAG_00838","SJAG_04424","SJAG_05186","SJAG_02287","SJAG_02350","SJAG_04224","SJAG_02300","SJAG_00294","SJAG_00879","SJAG_02681","SJAG_00572","SJAG_00657","SJAG_03569","SJAG_00943","SJAG_03077","SJAG_04908","SJAG_02025","SJAG_04475","SJAG_03410","SJAG_05187","SJAG_00945","SJAG_00253","SJAG_02530","SJAG_03252","SJAG_00772","SJAG_00245","SJAG_02372","SJAG_03156","SJAG_02046","SJAG_01764","SJAG_02377","SJAG_03846","SJAG_01907"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61838,65417,68301,68380,72495,72677,72750,73289,73481,73607,74708,74750,74797,75176,75488,76354,77238,77322,77507,77876,78233,78293,78448,78760,78949,79377,79960,80252,80441,80537,81053,81133,81577,81635,82085,82267,89690,91182,93176,103370,112182,112556,115536,119412],"is_not":false,"summary":null,"term":"GO:0032040"}]},"cv_name":"cellular_component","definition":"A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.","definition_xrefs":["GOC:vw","PMID:15120992","PMID:12957375","PMID:15590835","PMID:12068309","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00245":null,"SJAG_00253":null,"SJAG_00294":null,"SJAG_00538":null,"SJAG_00572":null,"SJAG_00657":null,"SJAG_00744":null,"SJAG_00772":null,"SJAG_00838":null,"SJAG_00879":null,"SJAG_00943":null,"SJAG_00945":null,"SJAG_01764":null,"SJAG_01907":null,"SJAG_02024":null,"SJAG_02025":null,"SJAG_02046":null,"SJAG_02287":null,"SJAG_02300":null,"SJAG_02350":null,"SJAG_02372":null,"SJAG_02377":null,"SJAG_02530":null,"SJAG_02608":null,"SJAG_02662":null,"SJAG_02681":null,"SJAG_02702":null,"SJAG_03028":null,"SJAG_03077":null,"SJAG_03156":null,"SJAG_03252":null,"SJAG_03341":null,"SJAG_03410":null,"SJAG_03569":null,"SJAG_03654":null,"SJAG_03846":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04224":null,"SJAG_04424":null,"SJAG_04475":null,"SJAG_04908":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0030684"}],"interesting_parent_ids":["GO:0005575","GO:0030684","GO:0032991"],"is_obsolete":false,"name":"small-subunit processome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"SSU processome","type":"exact"},{"name":"small subunit processome","type":"exact"}],"termid":"GO:0032040","terms_by_termid":{"GO:0032040":null}}


id: PBO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La protein homolog","termid":"PBO:0000937"}


id: GO:0050518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-C-methyl-D-erythritol 4-phosphate + CTP = 4-CDP-2-C-methyl-D-erythritol + diphosphate.","definition_xrefs":["EC:2.7.7.60","RHEA:13429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.60-RXN","GO:0008699","KEGG_REACTION:R05633"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol synthase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol synthase activity","type":"exact"},{"name":"CTP:2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","type":"exact"},{"name":"MCT activity","type":"related"},{"name":"MEP cytidylyltransferase activity","type":"exact"}],"termid":"GO:0050518"}


id: PBO:0076958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 1","termid":"PBO:0076958"}


id: MONDO:0010662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by intellectual deficit, spasticity in the lower limbs (spastic paraplegia), pes cavus deformity of both feet, an abnormal gait, and palmar and plantar hyperkeratosis. It has been reported in four brothers. The mother of the affected boys had normal intelligence, plantar hyperkeratosis and a strong facial resemblance to her retarded sons. Her three daughters were normal. This syndrome most likely an X-linked recessive condition.","definition_xrefs":["Orphanet:2824"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraplegia-intellectual disability-hyperkeratosis syndrome","secondary_identifiers":["OMIM:309560","UMLS:C2745996","MEDGEN:411554","MESH:C537058","GARD:2344"],"synonyms":[{"name":"Fitzsimmons-McLachlan-Gilbert syndrome","type":"exact"},{"name":"intellectual disability with spastic paraplegia and palmoplantar hyperkeratosis","type":"related"},{"name":"mental retardation with spastic paraplegia and palmoplantar hyperkeratosis","type":"related"}],"termid":"MONDO:0010662","xrefs":{"Monarch":{"xref_id":"0010662"}}}


id: GO:0018862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + phosphate = CO2 + H2O + phenyl phosphate.","definition_xrefs":["RHEA:74015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phenyl-phosphate phosphatase/carboxylase activity","secondary_identifiers":["KEGG_REACTION:R05603","MetaCyc:PHENYLPCARB-RXN","UM-BBD_reactionID:r0157","EC:4.1.1.123"],"synonyms":[{"name":"phenylphosphate carboxylase activity","type":"exact"}],"termid":"GO:0018862"}


id: GO:0003047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the catecholamine signaling molecule epinephrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by epinephrine","synonyms":[{"name":"blood pressure regulation by epinephrine","type":"related"},{"name":"regulation of blood pressure by adrenaline","type":"exact"}],"termid":"GO:0003047"}


id: GO:0006167
data:
  {"annotated_genes":["SJAG_02850","SJAG_01859","SJAG_01070","SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78870,80841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[75829,57535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"AMP metabolic process","termid":"GO:0046033"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"AMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"AMP anabolism","type":"exact"},{"name":"AMP biosynthesis","type":"exact"},{"name":"AMP formation","type":"exact"},{"name":"AMP synthesis","type":"exact"}],"termid":"GO:0006167","terms_by_termid":{"GO:0044208":null,"GO:0044209":null}}


id: PBO:0055123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2542","termid":"PBO:0055123"}


id: PATO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000452 relative pilosity value (obsolete PATO:0000452)","termid":"PATO:0000452"}


id: PBO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.-","termid":"PBO:0001808"}


id: MOD:00755
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an iodine atom of a residue for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodinated residue","synonyms":[{"name":"IRes","type":"exact"}],"termid":"MOD:00755"}


id: GO:1990045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sclerotium over time, from its formation to the mature structure. A sclerotium is a mycelial resting body, resistant to adverse environmental conditions.","definition_xrefs":["PMID:21148914","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerotium development","termid":"GO:1990045"}


id: GO:0120150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring disassembly.","definition_xrefs":["PMID:19109423"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring disassembly (obsolete GO:0120150)","termid":"GO:0120150"}


id: PBO:0030083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_tip","termid":"PBO:0030083"}


id: MONDO:1012057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"degenerative myopathy of deep pectoral muscle, non-human animal","termid":"MONDO:1011787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myopathy of deep pectoral muscle, turkey","secondary_identifiers":["OMIA:000264-9103"],"termid":"MONDO:1012057","xrefs":{"Monarch":{"xref_id":"1012057"}}}


id: GO:0045736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.","definition_xrefs":["GOC:go_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0000079"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle","termid":"GO:0045786"},{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"negative regulation of cyclin-dependent protein kinase activity","termid":"GO:1904030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0045736"}


id: MONDO:0800113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of vasculitis that is comprised of vasculitides that present with necrosis.","definition_xrefs":["PMID:637044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing vasculitis","secondary_identifiers":["NCIT:C70635","UMLS:C1318520","MEDGEN:230813"],"synonyms":[{"name":"systemic vasculitis","type":"exact"}],"termid":"MONDO:0800113","xrefs":{"Monarch":{"xref_id":"0800113"}}}


id: PBO:0053802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1058","termid":"PBO:0053802"}


id: PBO:0077427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 164","termid":"PBO:0077427"}


id: PBO:0059145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPL proto-oncogene, thrombopoietin receptor","termid":"PBO:0059145"}


id: PBO:0052089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 6","termid":"PBO:0052089"}


id: GO:1990414
data:
  {"annotated_genes":["SJAG_01067","SJAG_00796","SJAG_03926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71825,76916,77149],"is_not":false,"summary":null,"term":"GO:1990414"}]},"cv_name":"biological_process","definition":"The repair of a replication-born double-strand DNA break in which the DNA molecule is repaired using the homologous sequence of the sister chromatid which serves as a template to repair the breaks.","definition_xrefs":["GOC:rb","PMID:16888651","PMID:12820977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00796":null,"SJAG_01067":null,"SJAG_03926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"replication-born double-strand break repair via sister chromatid exchange","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"replication-born DSB repair by SCE","type":"exact"}],"termid":"GO:1990414","terms_by_termid":{"GO:1990414":null}}


id: FYPO:0004064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of RNA from one or more DNA templates is abnormal.","definition_xrefs":["GO:0006351","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype during vegetative growth","termid":"FYPO:0000290"},{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abnormal transcription during vegetative growth","synonyms":[{"name":"abnormal DNA-dependent transcription during vegetative growth","type":"exact"},{"name":"abnormal transcription during mitotic cell cycle","type":"related"},{"name":"abnormal transcription, DNA-templated, during vegetative growth","type":"exact"}],"termid":"FYPO:0004064"}


id: FYPO:0003310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which IMP cyclohydrolase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal IMP cyclohydrolase activity","termid":"FYPO:0003309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished IMP cyclohydrolase activity","synonyms":[{"name":"IMP cyclohydrolase activity abolished","type":"exact"}],"termid":"FYPO:0003310"}


id: PBO:0049440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 17","termid":"PBO:0049440"}


id: SO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000780 transposable_element_attribute (obsolete SO:0000780)","termid":"SO:0000780"}


id: PBO:0047656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 8","termid":"PBO:0047656"}


id: MONDO:1010520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft lip with or without cleft palate that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft lip with or without cleft palate, non-human animal","termid":"MONDO:1010034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip with or without cleft palate, dog","secondary_identifiers":["OMIA:001140-9615"],"termid":"MONDO:1010520","xrefs":{"Monarch":{"xref_id":"1010520"}}}


id: GO:0005122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a torso (tor) protein, a receptor tyrosine kinase.","definition_xrefs":["PMID:2927509","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"torso binding","synonyms":[{"name":"tor binding","type":"exact"},{"name":"tor ligand","type":"narrow"},{"name":"torso ligand","type":"narrow"}],"termid":"GO:0005122"}


id: PBO:0076377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAB3 antisense RNA 1","termid":"PBO:0076377"}


id: PBO:0018060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-2-butanone 4-phosphate synthase Rib3 (predicted)","termid":"PBO:0018060"}


id: FYPO:0001190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more enzymes that degrades cell wall polysaccharides. Cells stop growing (and may die) at a concentration of such enzymes that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to cell wall-degrading enzymes","secondary_identifiers":["FYPO:0001191"],"synonyms":[{"name":"hypersensitive to cell wall-degrading enzymes","type":"exact"},{"name":"sensitive to Lyticase","type":"narrow"},{"name":"sensitive to Novozyme 234","type":"narrow"},{"name":"sensitive to Zymolyase","type":"narrow"},{"name":"sensitive to beta-1,3-glucan laminaripentaohydrolase","type":"narrow"},{"name":"sensitive to cell wall-degrading enzymes during mitotic cell cycle","type":"related"},{"name":"sensitive to cell wall-degrading enzymes during vegetative growth","type":"exact"},{"name":"sensitive to lysing enzymes from Trichoderma harzianum","type":"narrow"}],"termid":"FYPO:0001190"}


id: MONDO:0009424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bartter syndrome in which the cause of the disease is a mutation in the KCNJ1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome","termid":"MONDO:0015231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter disease type 2","secondary_identifiers":["MESH:C537651","Orphanet:620220","MEDGEN:343428","UMLS:C1855849","GARD:22483","OMIM:241200","DOID:0110143","SCTID:700109009"],"synonyms":[{"name":"BARTS2","type":"exact"},{"name":"Bartter disease type 2","type":"exact"},{"name":"Bartter syndrome antenatal type 2","type":"related"},{"name":"Bartter syndrome caused by mutation in KCNJ1","type":"exact"},{"name":"Bartter syndrome type 2","type":"exact"},{"name":"Bartter syndrome type 2 antenatal","type":"exact"},{"name":"Bartter syndrome, antenatal, type 2","type":"related"},{"name":"Bartter syndrome, type 2","type":"exact"},{"name":"Bartter syndrome, type 2, antenatal","type":"related"},{"name":"KCNJ1 Bartter syndrome","type":"exact"},{"name":"hyperprostaglandin E syndrome 2","type":"exact"},{"name":"hypokalemic alkalosis with hypercalciuria 2 antenatal","type":"exact"},{"name":"hypokalemic alkalosis with hypercalciuria 2, antenatal","type":"related"},{"name":"hypokalemic alkalosis with hypercalciuria antenatal 2","type":"related"},{"name":"hypokalemic alkalosis with hypercalciuria, antenatal, 2","type":"related"}],"termid":"MONDO:0009424","xrefs":{"Monarch":{"xref_id":"0009424"}}}


id: PBO:0038567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein 1","termid":"PBO:0038567"}


id: PBO:0087330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin; involved in the retrieval of late-Golgi SNAREs from the post-Golgi endosome to the trans-Golgi network; interacts with Snx4p","termid":"PBO:0087330"}


id: PBO:0041318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 4","termid":"PBO:0041318"}


id: GO:0046939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing one or more phosphate groups into a nucleotide to produce a phosphorylated nucleoside.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphorylation (obsolete GO:0046939)","termid":"GO:0046939"}


id: GO:0097693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Eye-like subcellular structure found in dinoflagellates (a large group of single-celled eukaryotes). Consists of subcellular analogues to a cornea, lens, iris, and retina. Ocelloids are built from pre-existing organelles, including a cornea-like layer made of mitochondria and a retinal body made of anastomosing plastids.","definition_xrefs":["PMID:26131935","GOC:ar"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ocelloid","termid":"GO:0097693"}


id: PBO:0069502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 769, pseudogene","termid":"PBO:0069502"}


id: PBO:0028876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_M26_site","termid":"PBO:0028876"}


id: GO:0070529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from L-tryptophan to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-tryptophan aminotransferase activity","termid":"GO:0070529"}


id: PBO:0039057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 6","termid":"PBO:0039057"}


id: MONDO:0015814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary lymphoma of the skin composed of various numbers of small and large irregular neoplastic follicle center cells. Its morphologic pattern can be nodular, diffuse, or nodular and diffuse. It presents with solitary or grouped plaques and tumors, and it usually involves the scalp, forehead, or trunk. It rarely involves the legs. This type of cutaneous lymphoma tends to remain localized to the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent primary cutaneous B-cell lymphoma","termid":"MONDO:0015819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"primary cutaneous follicle center lymphoma","secondary_identifiers":["MEDGEN:234180","NCIT:C7217","GARD:13701","ICD10CM:C82.6","icd11.foundation:77501812","UMLS:C1333171","ICDO:9597/3","ONCOTREE:PCFCL","Orphanet:178540","SCTID:404143002"],"synonyms":[{"name":"Crosti's disease","type":"exact"},{"name":"PCFCL","type":"exact"},{"name":"Reticulohistiocytoma of the dorsum","type":"exact"},{"name":"cutaneous follicle center lymphoma","type":"exact"},{"name":"cutaneous follicle centre lymphoma","type":"exact"}],"termid":"MONDO:0015814","xrefs":{"Monarch":{"xref_id":"0015814"}}}


id: PBO:0029378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_G0","termid":"PBO:0029378"}


id: PBO:0090013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 heme lyase Cyt2","termid":"PBO:0090013"}


id: PBO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 2 pseudogene","termid":"PBO:0061981"}


id: GO:0035894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of platelet aggregation in another organism.","definition_xrefs":["GOC:bf","PMID:18804547","PMID:11453648","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of platelet aggregation in another organism (obsolete GO:0035894)","synonyms":[{"name":"positive regulation of platelet aggregation in another organism","type":"related"},{"name":"positive regulation of platelet aggregation in other organism","type":"exact"},{"name":"up-regulation of platelet aggregation in other organism","type":"related"},{"name":"upregulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0035894"}


id: MONDO:0016859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blepharophimosis - epicanthus inversus - ptosis (BPES) due to polyA expansion is a form of BPES, characterized by the classical eyelid malformation (blepharophimosis, ptosis, epicanthus inversus, and telecanthus) which may be associated with a mild ovarian involvement.","definition_xrefs":["Orphanet:261579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharophimosis, ptosis, and epicanthus inversus syndrome","termid":"MONDO:0007201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"blepharophimosis-epicanthus inversus-ptosis due to copy number variations","synonyms":[{"name":"blepharophimosis types 1 and 2 due to copy number variations","type":"exact"},{"name":"blepharophimosis-epicanthus inversus-ptosis due to a CNV","type":"exact"}],"termid":"MONDO:0016859","xrefs":{"Monarch":{"xref_id":"0016859"}}}


id: PBO:0029035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_multinucleate_cell_with_elongated_germ_tube","termid":"PBO:0029035"}


id: PBO:0043095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 7","termid":"PBO:0043095"}


id: MOD:01432
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S,4S)-4,5-dihydroxyleucine.","definition_xrefs":["PubMed:3718926","ChEBI:141819","RESID:AA0446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated leucine","termid":"MOD:01412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4S)-4,5-dihydroxyleucine","synonyms":[{"name":"(2S,4S)-2-amino-4,5-dihydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S,4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"(4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"MOD_RES (4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"gamma,delta-dihydroxyleucine","type":"exact"}],"termid":"MOD:01432"}


id: PBO:0030795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0030795"}


id: PBO:0076864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 13B","termid":"PBO:0076864"}


id: FYPO:0000329
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[121239,121243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[121166],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[121233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein modification is abnormal. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein modification during vegetative growth","references_by_uniquename":{"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697","SJAG_04551","SJAG_01787","SJAG_00610"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck1delta","gms1delta","pck2delta"],"synonyms":[{"name":"abnormal protein modification during mitotic cell cycle","type":"related"},{"name":"abnormal protein/peptide modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000329","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0034570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology_during_meiotic_cell_cycle","termid":"PBO:0034570"}


id: PBO:0066475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase pseudogene 2","termid":"PBO:0066475"}


id: PBO:0005033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin synthase","termid":"PBO:0005033"}


id: GO:0031979
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a plasma membrane-derived thylakoid.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid lumen","termid":"GO:0031977"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410","GO:0005886"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid lumen","synonyms":[{"name":"plasma membrane thylakoid lumen","type":"exact"}],"termid":"GO:0031979"}


id: GO:0022619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a generative cell. The generative cell gives rise to the sperm cells in the male gametophyte.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generative cell differentiation","termid":"GO:0022619"}


id: PBO:0050201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 18","termid":"PBO:0050201"}


id: MONDO:0016414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by hypotrichosis, syndactyly, intellectual deficit and early eruption of teeth. It has been described in two patients. The mode of transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:2266"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis-intellectual disability, Lopes type","secondary_identifiers":["MEDGEN:1371854","UMLS:C4509839","GARD:18763"],"synonyms":[{"name":"Lopes-Marques de Faria syndrome","type":"exact"}],"termid":"MONDO:0016414","xrefs":{"Monarch":{"xref_id":"0016414"}}}


id: PBO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor (predicted)","termid":"PBO:0001006"}


id: PBO:0073492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase 1","termid":"PBO:0073492"}


id: PBO:0077853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1 pseudogene 4","termid":"PBO:0077853"}


id: PBO:0056500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 4","termid":"PBO:0056500"}


id: PBO:0062807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 7","termid":"PBO:0062807"}


id: PBO:0109605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A12","termid":"PBO:0109605"}


id: SO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the ends of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_component","termid":"SO:0000840"},{"relation_name":"part_of","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_component","synonyms":[{"name":"LTR component","type":"exact"},{"name":"long term repeat component","type":"exact"}],"termid":"SO:0000848"}


id: PBO:0059875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 12","termid":"PBO:0059875"}


id: MONDO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myocardial infarction","termid":"MONDO:0004781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute inferolateral myocardial infarction","secondary_identifiers":["ICD9:410.22","SCTID:65547006","DOID:10649","MEDGEN:573665","ICD9:410.20","UMLS:C0340308","ICD9:410.21"],"synonyms":[{"name":"acute inferolateral myocardial infarction","type":"exact"},{"name":"acute myocardial infarction of inferolateral wall","type":"exact"}],"termid":"MONDO:0001089","xrefs":{"Monarch":{"xref_id":"0001089"}}}


id: MONDO:0003864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An indolent, mature B-cell neoplasm composed of small, round B-lymphocytes. When the bone marrow and peripheral blood are involved, the term chronic lymphocytic leukemia is used. The term small lymphocytic lymphoma is restricted to cases which do not show leukemic involvement of the bone marrow and peripheral blood.","definition_xrefs":["NCIT:C27911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell chronic lymphocytic leukemia","termid":"MONDO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma","secondary_identifiers":["UMLS:C1302547","ICDO:9823/3","DOID:6354","MEDGEN:224906","ONCOTREE:CLLSLL"],"synonyms":[{"name":"CLL/SLL","type":"exact"},{"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma","type":"exact"},{"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003864","xrefs":{"Monarch":{"xref_id":"0003864"}}}


id: MONDO:0032846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta, type 20","secondary_identifiers":["DOID:0111849","MEDGEN:1684751","UMLS:C5231439","OMIM:618644"],"synonyms":[{"name":"OI20","type":"related"},{"name":"OSTEOGENESIS IMPERFECTA, TYPE XX","type":"related"}],"termid":"MONDO:0032846","xrefs":{"Monarch":{"xref_id":"0032846"}}}


id: PBO:0026925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_at_RxxS_site","termid":"PBO:0026925"}


id: PBO:0073993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3","termid":"PBO:0073993"}


id: MONDO:0021238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the cornea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cornea neoplasm","secondary_identifiers":["MEDGEN:90940","UMLS:C0339304","NCIT:C4361"],"synonyms":[{"name":"cornea neoplasm (disease)","type":"exact"},{"name":"cornea tumor","type":"exact"},{"name":"cornea tumour","type":"exact"},{"name":"corneal neoplasm","type":"exact"},{"name":"corneal tumor","type":"exact"},{"name":"corneal tumour","type":"exact"},{"name":"neoplasm of cornea","type":"exact"},{"name":"neoplasm of the cornea","type":"exact"},{"name":"tumor of cornea","type":"exact"},{"name":"tumor of the cornea","type":"exact"},{"name":"tumour of cornea","type":"exact"},{"name":"tumour of the cornea","type":"exact"}],"termid":"MONDO:0021238","xrefs":{"Monarch":{"xref_id":"0021238"}}}


id: PBO:0054012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1342","termid":"PBO:0054012"}


id: GO:0009291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unidirectional (polarized) transfer of genetic information involving direct cellular contact between a donor and recipient cell; the contact is followed by the formation of a cellular bridge that physically connects the cells. Some or all of the chromosome(s) of the donor cell is transferred into the recipient cell.","definition_xrefs":["Wikipedia:Bacterial_conjugation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidirectional conjugation","synonyms":[{"name":"bacterial conjugation","type":"related"}],"termid":"GO:0009291"}


id: GO:0006302
data:
  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id: PBO:0055274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2701","termid":"PBO:0055274"}


id: GO:0052215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in the environment of a second organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052215)","synonyms":[{"name":"energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052215"}


id: GO:0061097
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}


id: PBO:0013014
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  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fe Repressor of Activation","termid":"PBO:0013014"}


id: PBO:0040585
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-secretase 1","termid":"PBO:0040585"}


id: GO:0090455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ornithine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"ornithine transport","termid":"GO:0015822"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ornithine transmembrane import into vacuole","synonyms":[{"name":"vacuolar ornithine import","type":"related"}],"termid":"GO:0090455"}


id: PBO:0045048
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLC1 Rho GTPase activating protein","termid":"PBO:0045048"}


id: FYPO:0005837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cortex of the cell tip does not occur. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["GO:0099110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip cortex during vegetative growth","termid":"FYPO:0005832"},{"relation_name":"is_a","term_name":"abolished protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005836"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein transport along microtubule to cell tip cortex during vegetative growth","synonyms":[{"name":"abolished protein movement along microtubule to cell tip cortex during vegetative growth","type":"exact"},{"name":"abolished protein transport along microtubule to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"abolished protein transport along microtubule to cell tip cortex during mitotic cell cycle","type":"related"},{"name":"protein transport along microtubule to cell tip cortex abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005837"}


id: GO:0019957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-C chemokine; C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"C-C chemokine binding","termid":"GO:0019957"}


id: GO:0034107
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["PMID:14754397","GOC:add","PMID:12905029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"negatively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte clearance","synonyms":[{"name":"negative regulation of RBC clearance","type":"exact"},{"name":"negative regulation of neocytolysis","type":"narrow"},{"name":"negative regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034107"}


id: MONDO:0002716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the spinal cord during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood spinal cord tumor","secondary_identifiers":["MEDGEN:209512","DOID:3637","UMLS:C1134515","NCIT:C9234"],"synonyms":[{"name":"childhood spinal cord neoplasm","type":"exact"},{"name":"paediatric spinal cord neoplasm","type":"exact"},{"name":"pediatric spinal cord neoplasm","type":"exact"},{"name":"spinal cord neoplasm of childhood","type":"exact"}],"termid":"MONDO:0002716","xrefs":{"Monarch":{"xref_id":"0002716"}}}


id: GO:1901032
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"is_a","term_name":"negative regulation of response to oxidative stress","termid":"GO:1902883"},{"relation_name":"negatively_regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to reactive oxygen species","synonyms":[{"name":"down regulation of response to AOS","type":"exact"},{"name":"down regulation of response to ROI","type":"exact"},{"name":"down regulation of response to ROS","type":"exact"},{"name":"down regulation of response to active oxygen species","type":"exact"},{"name":"down regulation of response to reactive oxidative species","type":"exact"},{"name":"down regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down regulation of response to reactive oxygen species","type":"exact"},{"name":"down-regulation of response to AOS","type":"exact"},{"name":"down-regulation of response to ROI","type":"exact"},{"name":"down-regulation of response to ROS","type":"exact"},{"name":"down-regulation of response to active oxygen species","type":"exact"},{"name":"down-regulation of response to reactive oxidative species","type":"exact"},{"name":"down-regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down-regulation of response to reactive oxygen species","type":"exact"},{"name":"downregulation of response to AOS","type":"exact"},{"name":"downregulation of response to ROI","type":"exact"},{"name":"downregulation of response to ROS","type":"exact"},{"name":"downregulation of response to active oxygen species","type":"exact"},{"name":"downregulation of response to reactive oxidative species","type":"exact"},{"name":"downregulation of response to reactive oxygen intermediate","type":"exact"},{"name":"downregulation of response to reactive oxygen species","type":"exact"},{"name":"inhibition of response to AOS","type":"exact"},{"name":"inhibition of response to ROI","type":"exact"},{"name":"inhibition of response to ROS","type":"exact"},{"name":"inhibition of response to active oxygen species","type":"exact"},{"name":"inhibition of response to reactive oxidative species","type":"exact"},{"name":"inhibition of response to reactive oxygen intermediate","type":"exact"},{"name":"inhibition of response to reactive oxygen species","type":"narrow"},{"name":"negative regulation of response to AOS","type":"exact"},{"name":"negative regulation of response to ROI","type":"exact"},{"name":"negative regulation of response to ROS","type":"exact"},{"name":"negative regulation of response to active oxygen species","type":"exact"},{"name":"negative regulation of response to reactive oxidative species","type":"exact"},{"name":"negative regulation of response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:1901032"}


id: MONDO:0009590
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