# terms

id: PBO:0065300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 4","termid":"PBO:0065300"}


id: GO:0055009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of cardiac atrium muscle is generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"},{"relation_name":"part_of","term_name":"atrial cardiac muscle tissue development","termid":"GO:0003228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle tissue morphogenesis","synonyms":[{"name":"atrial heart muscle morphogenesis","type":"exact"},{"name":"atrial myocardium morphogenesis","type":"exact"},{"name":"cardiac atrium muscle morphogenesis","type":"exact"}],"termid":"GO:0055009"}


id: GO:0042285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a xylosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"xylosyltransferase activity","termid":"GO:0042285"}


id: MOD:01113
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(p-biphenyl)isopropyl-oxycarbonyl","synonyms":[{"name":"Bpoc","type":"exact"}],"termid":"MOD:01113"}


id: PBO:0110331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 7","termid":"PBO:0110331"}


id: GO:2000153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of flagellar cell motility.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of flagellar cell motility (obsolete GO:2000153)","synonyms":[{"name":"regulation of flagellar cell motility","type":"exact"}],"termid":"GO:2000153"}


id: MONDO:0003480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dysgerminoma (disease) that involves the pineal body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pineal area germ cell neoplasm","termid":"MONDO:0002073"},{"relation_name":"is_a","term_name":"dysgerminoma","termid":"MONDO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal region dysgerminoma","secondary_identifiers":["DOID:5510","NCIT:C7169","MEDGEN:233328","UMLS:C1335415"],"synonyms":[{"name":"pineal body dysgerminoma (disease)","type":"exact"},{"name":"pineal dysgerminoma","type":"exact"},{"name":"pineal region dysgerminoma","type":"exact"}],"termid":"MONDO:0003480","xrefs":{"Monarch":{"xref_id":"0003480"}}}


id: PBO:0061884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPA1 antisense RNA 1","termid":"PBO:0061884"}


id: GO:0007101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Centrosome duplication and separation in the context of a meiotic cell cycle in a male organism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete male meiosis centrosome cycle (obsolete GO:0007101)","synonyms":[{"name":"centrosome cycle involved in male meiotic cell cycle","type":"exact"}],"termid":"GO:0007101"}


id: PBO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementation functionally complements E. coli PyrB","termid":"PBO:0034706"}


id: GO:0021506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of the neural folds of the rostral opening of the neural tube. The anterior neuropore appears before the process of neural tube closure is complete.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neuropore closure","termid":"GO:0021995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neuropore closure","termid":"GO:0021506"}


id: PBO:0057729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1304","termid":"PBO:0057729"}


id: PBO:0045059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG1 antisense RNA 1","termid":"PBO:0045059"}


id: MONDO:0018604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary nonpolyposis colorectal cancer characterized by the absence of germline mutations in DNA mismatch-repair genes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"familial colorectal cancer type X","secondary_identifiers":["NCIT:C120084","GARD:21840","MEDGEN:856172","Orphanet:440437","UMLS:C3896578"],"synonyms":[{"name":"FCCTX","type":"exact"},{"name":"familial colorectal cancer type X","type":"exact"}],"termid":"MONDO:0018604","xrefs":{"Monarch":{"xref_id":"0018604"}}}


id: PBO:0049894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 4","termid":"PBO:0049894"}


id: GO:0051099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of binding","synonyms":[{"name":"activation of binding","type":"narrow"},{"name":"stimulation of binding","type":"narrow"},{"name":"up regulation of binding","type":"exact"},{"name":"up-regulation of binding","type":"exact"},{"name":"upregulation of binding","type":"exact"}],"termid":"GO:0051099"}


id: GO:0043597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The Y-shaped region of a cytoplasmic replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork","termid":"GO:0005657"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"cytoplasmic replication fork","termid":"GO:0043597"}


id: GO:0100021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates iron ion transport.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of iron ion transport by transcription from RNA polymerase II promoter (obsolete GO:0100021)","synonyms":[{"name":"regulation of iron ion import by transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:0100021"}


id: GO:0046919
data:
  {"annotated_genes":["SJAG_01426"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102581],"is_not":false,"summary":null,"term":"GO:0046919"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a pyruvyl (oxopropanoyl) group from one compound to another.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01426":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"pyruvyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046919","terms_by_termid":{"GO:0046919":null}}


id: PR:O60102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family E member 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor rli1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.06","secondary_identifiers":["UniProtKB:O60102"],"synonyms":[{"name":"ATP-binding cassette sub-family E member rli1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNase L inhibitor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ABCE1","type":"exact"}],"termid":"PR:O60102"}


id: PR:Q9P3W6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC458.02c gene.","definition_xrefs":["UniProtKB:Q9P3W6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C458.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.02c","synonyms":[{"name":"Spom972h-SPAC458.02c","type":"exact"}],"termid":"PR:Q9P3W6"}


id: PBO:0064786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1F antisense RNA 1","termid":"PBO:0064786"}


id: GO:0065004
data:
  {"annotated_genes":["SJAG_02691","SJAG_02119","SJAG_03285","SJAG_00757","SJAG_00247","SJAG_04177","SJAG_01611","SJAG_00045","SJAG_00942","SJAG_04654","SJAG_04038","SJAG_02908","SJAG_03048","SJAG_03956","SJAG_04257","SJAG_02458","SJAG_04989","SJAG_02513","SJAG_03217","SJAG_04638","SJAG_01771","SJAG_02198","SJAG_03120","SJAG_00327","SJAG_02607","SJAG_04696","SJAG_04581","SJAG_05321","SJAG_03183","SJAG_03220","SJAG_01708","SJAG_02314","SJAG_01207","SJAG_03905","SJAG_05273","SJAG_02174","SJAG_01475","SJAG_00170","SJAG_01523","SJAG_03007","SJAG_03542","SJAG_01823","SJAG_04530","SJAG_03095","SJAG_00718","SJAG_02813","SJAG_00741","SJAG_01378","SJAG_00939","SJAG_02267","SJAG_00766","SJAG_00873","SJAG_01410","SJAG_01837","SJAG_03900","SJAG_03685","SJAG_04879","SJAG_04995","SJAG_00303","SJAG_00684","SJAG_00307","SJAG_02664","SJAG_04274","SJAG_02667","SJAG_02303","SJAG_02708","SJAG_04272","SJAG_00692","SJAG_01808","SJAG_02074","SJAG_04547","SJAG_00336","SJAG_00756","SJAG_03867","SJAG_02079","SJAG_03619","SJAG_03221","SJAG_02872","SJAG_02906","SJAG_02465"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119700,116220,101088,92007,108331,90817,104022,73247,115108,96646,120872,101339,97422,104861,81710,118465,117078,94739,120836,109317],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034080"},{"annotations":[117402,111925,109319,115562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140529"},{"annotations":[66301,74199,76997,67133,77669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[65804,67725,68178,57552,92726,107438,81774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051382"},{"annotations":[105275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140530"},{"annotations":[80428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[109635,112290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"},{"annotations":[73877,80149,57620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902977"},{"annotations":[105278,112551,117021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"},{"annotations":[119951],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[74904,75157,116538,109703,63176,93060,93062,71763,98401,80746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006334"},{"annotations":[110959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006294"},{"annotations":[91599,118674,104330],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905561"},{"annotations":[91658,81448],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[70035,79379,65218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001188"},{"annotations":[73937,72383,75540,76332,77463,78728,73261,79160,96092,68900,72532,76850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051123"},{"annotations":[105025,73695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070898"},{"annotations":[101678,117946,110095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905324"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"protein-DNA complex organization","termid":"GO:0071824"}],"gene_count":80,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00170":null,"SJAG_00247":null,"SJAG_00303":null,"SJAG_00307":null,"SJAG_00327":null,"SJAG_00336":null,"SJAG_00684":null,"SJAG_00692":null,"SJAG_00718":null,"SJAG_00741":null,"SJAG_00756":null,"SJAG_00757":null,"SJAG_00766":null,"SJAG_00873":null,"SJAG_00939":null,"SJAG_00942":null,"SJAG_01207":null,"SJAG_01378":null,"SJAG_01410":null,"SJAG_01475":null,"SJAG_01523":null,"SJAG_01611":null,"SJAG_01708":null,"SJAG_01771":null,"SJAG_01808":null,"SJAG_01823":null,"SJAG_01837":null,"SJAG_02074":null,"SJAG_02079":null,"SJAG_02119":null,"SJAG_02174":null,"SJAG_02198":null,"SJAG_02267":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02458":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_02607":null,"SJAG_02664":null,"SJAG_02667":null,"SJAG_02691":null,"SJAG_02708":null,"SJAG_02813":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02908":null,"SJAG_03007":null,"SJAG_03048":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03183":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03221":null,"SJAG_03285":null,"SJAG_03542":null,"SJAG_03619":null,"SJAG_03685":null,"SJAG_03867":null,"SJAG_03900":null,"SJAG_03905":null,"SJAG_03956":null,"SJAG_04038":null,"SJAG_04177":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04274":null,"SJAG_04530":null,"SJAG_04547":null,"SJAG_04581":null,"SJAG_04638":null,"SJAG_04654":null,"SJAG_04696":null,"SJAG_04879":null,"SJAG_04989":null,"SJAG_04995":null,"SJAG_05273":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"protein-DNA complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"DNA-protein complex assembly","type":"exact"}],"termid":"GO:0065004","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0001188":null,"GO:0006294":null,"GO:0006334":null,"GO:0010772":null,"GO:0034080":null,"GO:0045899":null,"GO:0051123":null,"GO:0051382":null,"GO:0070898":null,"GO:0140529":null,"GO:0140530":null,"GO:1902977":null,"GO:1902985":null,"GO:1905324":null,"GO:1905560":null,"GO:1905561":null}}


id: GO:0021644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the vagus nerve is generated and organized. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"vagus nerve development","termid":"GO:0021564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve morphogenesis","synonyms":[{"name":"CN X morphogenesis","type":"related"}],"termid":"GO:0021644"}


id: PBO:0049308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega 3, pseudogene","termid":"PBO:0049308"}


id: PR:O94314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.10 gene.","definition_xrefs":["UniProtKB:O94314","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C215.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.10","synonyms":[{"name":"Spom972h-SPBC215.10","type":"exact"}],"termid":"PR:O94314"}


id: FYPO:0004071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion during mitotic cell cycle","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0004071"}


id: GO:0050987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient sulfation of peptidyl-serine to form O-sulfo-L-serine.","definition_xrefs":["RESID:AA0361"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-sulfo-L-serine (obsolete GO:0050987)","termid":"GO:0050987"}


id: PBO:0069019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 263, pseudogene","termid":"PBO:0069019"}


id: PBO:0091735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNA-specific guide RNA","termid":"PBO:0091735"}


id: GO:0000302
data:
  {"annotated_genes":["SJAG_05181","SJAG_00141","SJAG_03653","SJAG_04823","SJAG_04953","SJAG_02183","SJAG_01199","SJAG_04403","SJAG_03303","SJAG_02515","SJAG_01734","SJAG_04399","SJAG_01216","SJAG_04788","SJAG_00668","SJAG_04632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97210],"is_not":false,"summary":null,"term":"GO:0000302"},{"annotations":[97148,110813,119373,120310,101958,107013],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[90926,91350,58637,101224,95084,70584,76102,66407,61787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00668":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02183":null,"SJAG_02515":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to reactive oxygen species","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"response to AOS","type":"exact"},{"name":"response to ROI","type":"exact"},{"name":"response to ROS","type":"exact"},{"name":"response to active oxygen species","type":"exact"},{"name":"response to reactive oxidative species","type":"exact"},{"name":"response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:0000302","terms_by_termid":{"GO:0000302":null,"GO:0019430":null,"GO:0061692":null}}


id: PBO:0086716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene","termid":"PBO:0086716"}


id: GO:0070669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-2 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-2","synonyms":[{"name":"response to IL-2","type":"exact"}],"termid":"GO:0070669"}


id: PR:Q9C0X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB8E5.08 gene.","definition_xrefs":["UniProtKB:Q9C0X7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB8E5.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.08","synonyms":[{"name":"Spom972h-SPAPB8E5.08","type":"exact"}],"termid":"PR:Q9C0X7"}


id: GO:0046356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"acetyl-CoA catabolic process","synonyms":[{"name":"acetyl-CoA breakdown","type":"exact"},{"name":"acetyl-CoA catabolism","type":"exact"},{"name":"acetyl-CoA degradation","type":"exact"}],"termid":"GO:0046356"}


id: PBO:0050889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediate early response 2","termid":"PBO:0050889"}


id: GO:0006102
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101730],"is_not":false,"summary":null,"term":"GO:0006102"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"isocitrate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isocitrate metabolism","type":"exact"}],"termid":"GO:0006102","terms_by_termid":{"GO:0006102":null}}


id: MONDO:0012886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 17q21.2.","definition_xrefs":["DOID:0110905","PMID:18438405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 22","secondary_identifiers":["MEDGEN:382862","MESH:C567327","OMIM:612380","UMLS:C2676485"],"synonyms":[{"name":"IBD22","type":"exact"},{"name":"inflammatory bowel disease 22","type":"exact"},{"name":"inflammatory bowel disease type 22","type":"exact"}],"termid":"MONDO:0012886","xrefs":{"Monarch":{"xref_id":"0012886"}}}


id: MONDO:0006095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoid tumor characterized by a high mitotic rate, often associated with the presence of necrosis and nuclear pleomorphism.","definition_xrefs":["NCIT:C72074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical carcinoid tumor","secondary_identifiers":["MEDGEN:226834","SCTID:445238008","EFO:1000097","UMLS:C1266032"],"synonyms":[{"name":"atypical carcinoid tumor","type":"exact"},{"name":"malignant carcinoid tumor","type":"exact"},{"name":"malignant carcinoid tumour","type":"exact"}],"termid":"MONDO:0006095","xrefs":{"Monarch":{"xref_id":"0006095"}}}


id: PR:O60086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ilv6 gene.","definition_xrefs":["UniProtKB:O60086","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase small subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.04","synonyms":[{"name":"AHAS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ALS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ilv6","type":"exact"},{"name":"acetohydroxy-acid synthase small subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60086"}


id: MONDO:0009497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kifafa seizure disorder","secondary_identifiers":["MESH:C537708","OMIM:245180","MEDGEN:208655","UMLS:C0796010"],"synonyms":[{"name":"Complex familial seizure disorder","type":"related"},{"name":"Kifafa seizure disorder","type":"exact"},{"name":"Vitsala","type":"related"},{"name":"parkinsonian features and neurologic abnormalities, intellectual disability and transient psychotic episodes","type":"related"},{"name":"parkinsonian features and neurologic abnormalities, mental retardation and transient psychotic episodes","type":"related"}],"termid":"MONDO:0009497","xrefs":{"Monarch":{"xref_id":"0009497"}}}


id: MONDO:0013170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A autosomal recessive cutis laxa type I that has material basis in homozygous or compound heterozygous mutation in the LTBP4 gene on chromosome 19q13","definition_xrefs":["DOID:0070139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cutis laxa with severe pulmonary, gastrointestinal and urinary anomalies","secondary_identifiers":["UMLS:C2750804","MEDGEN:442566","MESH:C567716","icd11.foundation:424903269","PMID:19836010","Orphanet:221145","OMIM:613177","GARD:17140"],"synonyms":[{"name":"ARCL1C","type":"exact"},{"name":"Urban-Rifkin-Davis syndrome","type":"exact"},{"name":"autosomal recessive cutis laxa type 1C","type":"exact"},{"name":"autosomal recessive cutis laxa type IC","type":"related"},{"name":"cutis laxa with Severe pulmonary, gastrointestinal, and urinary abnormalities","type":"related"},{"name":"cutis laxa, autosomal recessive, type 1C","type":"related"},{"name":"cutis laxa, autosomal recessive, type IC","type":"related"}],"termid":"MONDO:0013170","xrefs":{"Monarch":{"xref_id":"0013170"}}}


id: GO:0032603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of fractalkine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:12729461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"fractalkine production","secondary_identifiers":["GO:0050754","GO:0050756","GO:0050751"],"synonyms":[{"name":"ABCD-3 production","type":"exact"},{"name":"CX3CL1 production","type":"exact"},{"name":"fractalkine biosynthetic process","type":"narrow"},{"name":"fractalkine metabolic process","type":"narrow"},{"name":"neurotactin production","type":"exact"}],"termid":"GO:0032603"}


id: GO:0097053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-kynurenine, the L-enantiomer of the amino acid kynurenine (3-(2-aminobenzoyl)-alanine).","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"L-kynurenine metabolic process","termid":"GO:0097052"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-kynurenine catabolic process","synonyms":[{"name":"L-kynurenine breakdown","type":"exact"},{"name":"L-kynurenine catabolism","type":"exact"},{"name":"L-kynurenine degradation","type":"exact"}],"termid":"GO:0097053"}


id: PBO:0077950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 9-1","termid":"PBO:0077950"}


id: GO:0120276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cerebral blood circulation.","definition_xrefs":["GOC:krc","PMID:25397684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"cerebral blood circulation","termid":"GO:0120275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cerebral blood circulation","synonyms":[{"name":"regulation of cerebrum blood circulation","type":"exact"},{"name":"regulation of telencephalon blood circulation","type":"exact"}],"termid":"GO:0120276"}


id: GO:0072342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of anion stress, an increase or decrease in the concentration of negatively charged ions in the environment.","definition_xrefs":["GOC:cvs","PMID:19641131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anion stress","termid":"GO:0072342"}


id: GO:0061059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the peptidoglycan recognition protein signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidoglycan recognition protein signaling pathway","termid":"GO:0061058"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"peptidoglycan recognition protein signaling pathway","termid":"GO:0061057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"positive regulation of peptidoglycan recognition protein signalling pathway","type":"exact"}],"termid":"GO:0061059"}


id: PBO:0068133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 440","termid":"PBO:0068133"}


id: PBO:0027529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caffeine_and_rapamycin","termid":"PBO:0027529"}


id: PATO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which ends later than the natural end time.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"offset quality","termid":"PATO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally extended","termid":"PATO:0001333"}


id: GO:2001030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular glucuronidation (obsolete GO:2001030)","synonyms":[{"name":"negative regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"negative regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"negative regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"negative regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001030"}


id: FYPO:0005390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that more dots are observed than in normal (wild type) cells during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased punctate nuclear protein localization","termid":"FYPO:0005116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased punctate nuclear protein localization during cellular response to ionizing radiation","synonyms":[{"name":"increased punctate nuclear protein localisation during cellular response to ionising radiation","type":"exact"},{"name":"increased punctate nuclear protein localization during cellular response to IR","type":"exact"},{"name":"increased punctate nuclear protein localization during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased punctate nuclear protein localization during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005390"}


id: GO:0031780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a corticotropin hormone receptor.","definition_xrefs":["GOC:dph","GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"corticotropin hormone receptor binding","secondary_identifiers":["GO:0071856"],"synonyms":[{"name":"ACTH receptor binding","type":"exact"},{"name":"adrenocorticotropic hormone receptor ligand","type":"narrow"},{"name":"adrenocorticotropin hormone receptor binding","type":"exact"},{"name":"adrenocorticotropin receptor binding","type":"exact"},{"name":"corticotropin receptor binding","type":"exact"}],"termid":"GO:0031780"}


id: GO:0015943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formate, also known as methanoate, the anion HCOO- derived from methanoic (formic) acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formate biosynthetic process","synonyms":[{"name":"formate anabolism","type":"exact"},{"name":"formate biosynthesis","type":"exact"},{"name":"formate formation","type":"exact"},{"name":"formate synthesis","type":"exact"},{"name":"formic acid biosynthesis","type":"exact"},{"name":"formic acid biosynthetic process","type":"exact"}],"termid":"GO:0015943"}


id: PBO:0028642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated_cell_with_branch_forming_adjacent_to_septum","termid":"PBO:0028642"}


id: PBO:0081126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFHX3 antisense RNA 1","termid":"PBO:0081126"}


id: PBO:0036145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036145"}


id: GO:0008800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-lactam + H2O = a substituted beta-amino acid.","definition_xrefs":["EC:3.5.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"beta-lactamase activity","secondary_identifiers":["MetaCyc:BETA-LACTAMASE-RXN","Reactome:R-HSA-9911513","Reactome:R-HSA-9911515","Reactome:R-HSA-9911519","Reactome:R-HSA-9911518","Reactome:R-HSA-9911520","RHEA:20401"],"synonyms":[{"name":"ampicillinase activity","type":"related"},{"name":"beta-lactam hydrolase activity","type":"related"},{"name":"beta-lactamase A, B, C","type":"related"},{"name":"beta-lactamase AME I","type":"related"},{"name":"beta-lactamase I-III","type":"related"},{"name":"cephalosporin-beta-lactamase activity","type":"related"},{"name":"exopenicillinase activity","type":"related"},{"name":"neutrapen","type":"related"},{"name":"penicillin amido-beta-lactamhydrolase activity","type":"related"},{"name":"penicillin beta-lactamase activity","type":"related"},{"name":"penicillinase I, II","type":"related"}],"termid":"GO:0008800"}


id: MONDO:0005092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive, poorly differentiated invasive adenocarcinoma characterized by the presence of malignant glandular cells in which the nucleus is pressed to one side by the presence of intracytoplasmic mucus. It may arise from the stomach, small and large intestine, ampulla of Vater, appendix, gallbladder, pancreas, lung, bladder, breast, and prostate gland.","definition_xrefs":["NCIT:C3774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"signet ring cell carcinoma","secondary_identifiers":["UMLS:C0206696","ICDO:8490/3","MEDGEN:61663","DOID:3493","EFO:0000698","MESH:D018279"],"synonyms":[{"name":"signet ring carcinoma","type":"exact"},{"name":"signet ring carcinoma NOS (morphologic abnormality)","type":"exact"},{"name":"signet ring cell adenocarcinoma","type":"exact"},{"name":"signet ring cell carcinoma","type":"exact"},{"name":"signet ring cell carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005092","xrefs":{"Monarch":{"xref_id":"0005092"}}}


id: GO:0070666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mast cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell proliferation","termid":"GO:0070666"}


id: MONDO:0012348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the CEL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005015","MONDO:0019254","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 8","secondary_identifiers":["GARD:10662","MESH:C565225","OMIM:609812","SCTID:609575003","DOID:0111105","MEDGEN:342845","UMLS:C1853297"],"synonyms":[{"name":"CEL maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"DPED","type":"related"},{"name":"MODY type 8","type":"exact"},{"name":"MODY8","type":"exact"},{"name":"diabetes and pancreatic exocrine","type":"exact"},{"name":"diabetes and pancreatic exocrine dysfunction","type":"related"},{"name":"diabetes mellitus MODY type 8","type":"related"},{"name":"diabetes-pancreatic exocrine dysfunction syndrome","type":"related"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in CEL","type":"exact"},{"name":"maturity-onset diabetes of the young type 8 with exocrine dysfunction","type":"exact"},{"name":"maturity-onset diabetes of the young, type 8","type":"related"},{"name":"maturity-onset diabetes of the young, type 8, with exocrine dysfunction","type":"related"},{"name":"maturity-onset diabetes of the young, type VIII","type":"exact"},{"name":"type 8 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0012348","xrefs":{"Monarch":{"xref_id":"0012348"}}}


id: MONDO:0035646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy type 1","termid":"MONDO:0008056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"congenital-onset Steinert myotonic dystrophy","secondary_identifiers":["GARD:22361","MEDGEN:1842512","ICD10CM:G71.1","Orphanet:589821","UMLS:C5680305"],"synonyms":[{"name":"Congenital-onset Steinert disease","type":"exact"},{"name":"Congenital-onset myotonic dystrophy type 1","type":"exact"}],"termid":"MONDO:0035646","xrefs":{"Monarch":{"xref_id":"0035646"}}}


id: SO:1000092
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Any sequence variant effect that is known at nucleotide level but cannot be explained by using other key terms.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000092 sequence_variant_causing_complex_change_of_translational_product (obsolete SO:1000092)","synonyms":[{"name":"mutation causing complex change of translational product","type":"related"},{"name":"sequence variant causing complex change of translational product","type":"exact"}],"termid":"SO:1000092"}


id: MONDO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by the raccoon nematode Baylisascaris procyonis, which is transmitted by the ingestion of embryonated eggs in contaminated soil; symptoms depend on larval migration sites (visceral organs, eye, or brain) provoking severe inflammatory responses.","definition_xrefs":["NCIT:C128397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baylisascariasis","secondary_identifiers":["MEDGEN:547881","DOID:0050259","UMLS:C0277150"],"synonyms":[{"name":"Baylisascaris procyonis caused disease or disorder","type":"exact"},{"name":"Baylisascaris procyonis disease or disorder","type":"exact"},{"name":"Baylisascaris procyonis infectious disease","type":"exact"},{"name":"raccoon roundworm infection","type":"exact"}],"termid":"MONDO:0000297","xrefs":{"Monarch":{"xref_id":"0000297"}}}


id: PBO:0077179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 3","termid":"PBO:0077179"}


id: GO:0097140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BIM and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BIM-BCL-xl complex","termid":"GO:0097140"}


id: GO:2000076
data:
  {"annotated_genes":["SJAG_01787","SJAG_02838","SJAG_02392","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105654,92716,121367,112757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of site selection that occurs as part of cytokinesis.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokinesis","termid":"GO:0032467"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, site selection","termid":"GO:2000073"},{"relation_name":"positively_regulates","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokinesis, site selection","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"positive regulation of site selection involved in cell cycle cytokinesis","type":"exact"}],"termid":"GO:2000076","terms_by_termid":{"GO:1903617":null}}


id: PBO:0053614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 652","termid":"PBO:0053614"}


id: GO:0009748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by hexose and independent of hexokinase.","definition_xrefs":["GOC:sm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose mediated signaling","termid":"GO:0009757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hexokinase-independent signaling","synonyms":[{"name":"hexokinase-independent signalling","type":"exact"}],"termid":"GO:0009748"}


id: GO:0010317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Refers to the alpha subunit of the heterodimeric complex that possesses pyrophosphate-dependent phosphofructokinase activity.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"pyrophosphate-dependent phosphofructokinase complex","termid":"GO:0010316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex","synonyms":[{"name":"PFK complex, alpha-subunit","type":"related"}],"termid":"GO:0010317"}


id: MONDO:0009192
data:
  {"annotated_genes":["SJAG_01942","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87608,87609],"is_not":false,"summary":null,"term":"MONDO:0009192"}]},"cv_name":"mondo","definition":"Wolcott-Rallison syndrome (WRS) is a very rare genetic disease, characterized by permanent neonatal diabetes mellitus (PNDM) with multiple epiphyseal dysplasia and other clinical manifestations, including recurrent episodes of acute liver failure.","definition_xrefs":["Orphanet:1667"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Wolcott-Rallison syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0432217","GARD:5589","icd11.foundation:2096915129","OMIM:226980","SCTID:254066006","MEDGEN:140926","MESH:C536739","DOID:0090060","NCIT:C131007"],"synonyms":[{"name":"IDDM-MED syndrome","type":"related"},{"name":"Iddm-Med syndrome","type":"related"},{"name":"MED-IDDM syndrome","type":"related"},{"name":"Med-Iddm syndrome","type":"related"},{"name":"WRS","type":"exact"},{"name":"Wolcott Rallison syndrome","type":"related"},{"name":"Wolcott-Rallison syndrome","type":"exact"},{"name":"early-onset diabetes mellitus with multiple epiphyseal dysplasia","type":"exact"},{"name":"epiphyseal dysplasia multiple with early-onset diabetes mellitus","type":"related"},{"name":"epiphyseal dysplasia, multiple, with early-onset diabetes mellitus","type":"related"}],"termid":"MONDO:0009192","terms_by_termid":{"MONDO:0009192":null},"xrefs":{"Monarch":{"xref_id":"0009192"}}}


id: MOD:00668
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a decanoyloxy group.","definition_xrefs":["Unimod:449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decanoylated residue","termid":"MOD:00667"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-decanoylated residue","synonyms":[{"name":"Decanoyl","type":"related"},{"name":"ODecRes","type":"exact"},{"name":"lipid","type":"related"}],"termid":"MOD:00668"}


id: SO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A species specific unprocessed pseudogene without a parent gene, as it has an active orthologue in another species.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unitary_pseudogene","termid":"SO:0001759"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_unitary_pseudogene","synonyms":[{"name":"transcribed unitary pseudogene","type":"exact"}],"termid":"SO:0002108"}


id: PBO:0034539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule-based_movement","termid":"PBO:0034539"}


id: GO:0008455
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R.","definition_xrefs":["EC:2.4.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.143-RXN","Reactome:R-HSA-4793955","Reactome:R-HSA-975829","RHEA:12941","Reactome:R-HSA-9694656"],"synonyms":[{"name":"GnTII activity","type":"related"},{"name":"N-acetylglucosaminyltransferase II activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase II activity","type":"related"},{"name":"UDP-GlcNAc:mannoside alpha-(1,6) acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-GlcNAc:mannoside alpha-1,6 acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:6-(alpha-D-mannosyl)-beta-D-mannosyl-glycoprotein 2-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"acetylglucosaminyltransferase II activity","type":"related"},{"name":"alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,6-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylglucosamine-alpha-1,6-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-alpha-D-mannoside beta(1,2)-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-alpha-D-mannoside beta-1,2-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mannoside alpha(1,6)-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mannoside alpha-1,6-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0008455"}


id: MONDO:0017855
data:
  {"annotated_genes":["SJAG_04199","SJAG_02527","SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[89012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011686"},{"annotations":[87563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"}]},"cv_name":"mondo","definition":"T-B- severe combined immunodeficiency (SCID) is a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T and B lymphocytes, resulting in recurrent early-onset severe respiratory viral, bacterial or fungal infections, diarrhea and failure to thrive. Hypersensitivity to ionizing radiation is a characteristic feature of some of its sub-types.","definition_xrefs":["Orphanet:317419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02038":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B- severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5679893","GARD:21406","MEDGEN:1842252"],"synonyms":[{"name":"T-B- SCID","type":"exact"}],"termid":"MONDO:0017855","terms_by_termid":{"MONDO:0009973":null,"MONDO:0011686":null,"MONDO:0012650":null},"xrefs":{"Monarch":{"xref_id":"0017855"}}}


id: PR:Q9P7K9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate semialdehyde dehydrogenase [NAD(P)+] Sad that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03872","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase-like protein C21C3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.15c","secondary_identifiers":["UniProtKB:Q9P7K9"],"synonyms":[{"name":"Spom972h-sad","type":"exact"}],"termid":"PR:Q9P7K9"}


id: MONDO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute hepatitis resulting from ingestion of alcohol.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"},{"relation_name":"is_a","term_name":"alcoholic liver diseases","termid":"MONDO:0043693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"alcoholic hepatitis","secondary_identifiers":["NCIT:C34684","ICD9:571.1","icd11.foundation:229221394","UMLS:C0019187","ICD10CM:K70.1","EFO:1001345","CSP:1754-6978","MEDGEN:42422","MESH:D006519","DOID:12351","SCTID:235875008"],"synonyms":[{"name":"acute alcoholic Hepatitis","type":"exact"},{"name":"acute alcoholic hepatitis","type":"exact"},{"name":"acute alcoholic liver disease","type":"exact"},{"name":"alcoholic Hepatitis","type":"exact"},{"name":"alcoholic hepatitis","type":"exact"}],"termid":"MONDO:0001505","xrefs":{"Monarch":{"xref_id":"0001505"}}}


id: PR:O60113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15C4.04c gene.","definition_xrefs":["UniProtKB:O60113","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C15C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.04c","synonyms":[{"name":"Spom972h-SPBC15C4.04c","type":"exact"}],"termid":"PR:O60113"}


id: GO:0002670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell tolerance induction","termid":"GO:0002661"},{"relation_name":"is_a","term_name":"regulation of lymphocyte anergy","termid":"GO:0002911"},{"relation_name":"regulates","term_name":"B cell anergy","termid":"GO:0002515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell anergy","synonyms":[{"name":"regulation of B lymphocyte anergy","type":"exact"},{"name":"regulation of B-cell anergy","type":"exact"},{"name":"regulation of B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002670"}


id: SO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed resulting in a codon that encodes for an amino acid with different biochemical properties.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"missense_variant","termid":"SO:0001583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_conservative_missense_variant","synonyms":[{"name":"non conservative missense codon","type":"exact"},{"name":"non conservative missense variant","type":"exact"}],"termid":"SO:0001586"}


id: GO:0070319
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transport vesicle that mediates transport from the Golgi to the plasma membrane, and fuses with the plasma membrane to release various cargo molecules, such as proteins or hormones, by exocytosis.","definition_xrefs":["GOC:mah","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicle","termid":"GO:0070382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"Golgi to plasma membrane transport vesicle","synonyms":[{"name":"Golgi to plasma membrane constitutive secretory pathway transport vesicle","type":"exact"},{"name":"Golgi-plasma membrane transport vesicle","type":"exact"}],"termid":"GO:0070319"}


id: PBO:0054177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1550","termid":"PBO:0054177"}


id: PBO:0111335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1754 family, human FAM32A homolog, implicated in mRNA splicing or surveillance","termid":"PBO:0111335"}


id: GO:0017003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme and a protein.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-tetrapyrrole linkage","termid":"GO:0017006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"protein-heme linkage","synonyms":[{"name":"protein-haem linkage","type":"exact"}],"termid":"GO:0017003"}


id: PBO:0039923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 25","termid":"PBO:0039923"}


id: PBO:0056662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED28 divergent transcript","termid":"PBO:0056662"}


id: GO:0016270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 4 O-glycan structure, GlcNAc-beta-(1->6)[GalNAc-beta-(1->3)]-GalNAc.","definition_xrefs":["GOC:mah","PMID:10580130","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete O-glycan processing, core 4 (obsolete GO:0016270)","termid":"GO:0016270"}


id: MONDO:0014159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spectrin-associated autosomal recessive cerebellar ataxia is a rare, genetic neurological disease, due to SPTBN2 mutations, characterized by global development delay in infancy, followed by childhood-onset gait ataxia with limb dysmetria and dysdiadochokinesia, mild to severe intellectual disability, development of cerebellar atrophy, and abnormal eye movements (including a convergent squint, hypometric saccades, jerky pursuit movements and incomplete range of movement).","definition_xrefs":["Orphanet:352403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 14","secondary_identifiers":["GARD:17516","OMIM:615386","SCTID:763351003","DOID:0080058","UMLS:C4706415","MEDGEN:1636182"],"synonyms":[{"name":"Ataxie spinocérébelleuse à début infantile avec retard psychomoteur","type":"exact"},{"name":"SCAR14","type":"exact"},{"name":"SPARCA","type":"exact"},{"name":"SPARCA1","type":"exact"},{"name":"SPTBN2 autosomal recessive cerebellar ataxia","type":"exact"},{"name":"autosomal recessive cerebellar ataxia caused by mutation in SPTBN2","type":"exact"},{"name":"autosomal recessive cerebellar ataxia-cognitive defect syndrome","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 14","type":"exact"},{"name":"cerebellar ataxia, autosomal recessive, spectrin-associated, 1","type":"related"},{"name":"infantile-onset spinocerebellar ataxia-psychomotor delay syndrome","type":"exact"},{"name":"spectrin-associated autosomal recessive cerebellar ataxia","type":"related"},{"name":"spectrin-associated autosomal recessive cerebellar ataxia type 1","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 14","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 14","type":"exact"}],"termid":"MONDO:0014159","xrefs":{"Monarch":{"xref_id":"0014159"}}}


id: MONDO:0015669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with dentinogenesis imperfecta (obsolete MONDO:0015669)","secondary_identifiers":["Orphanet:167762"],"termid":"MONDO:0015669","xrefs":{"Monarch":{"xref_id":"0015669"}}}


id: PBO:0002906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein (predicted)","termid":"PBO:0002906"}


id: FYPO:0004842
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which a protein that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to cytoplasm","type":"exact"},{"name":"protein mislocalised to cytoplasm","type":"exact"}],"termid":"FYPO:0004842","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0045995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 2B","termid":"PBO:0045995"}


id: PBO:0077370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM108 antisense RNA 1","termid":"PBO:0077370"}


id: GO:0035077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The decondensing (loosening) and swelling of the chromosomal sites of hormone-responsive genes on polytene chromosomes in response to increased production of the steroid hormone 20-hydroxyecdysone (ecdysone) in Drosophila larvae approaching pupation.","definition_xrefs":["GOC:bf","PMID:12543962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polytene chromosome puffing","termid":"GO:0035079"},{"relation_name":"part_of","term_name":"cellular response to ecdysone","termid":"GO:0071390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecdysone-mediated polytene chromosome puffing","termid":"GO:0035077"}


id: PBO:0040637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain abundant membrane attached signal protein 1","termid":"PBO:0040637"}


id: PBO:0069059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 306, pseudogene","termid":"PBO:0069059"}


id: PBO:0109225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 6","termid":"PBO:0109225"}


id: GO:1900631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tridecane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tridecane metabolic process","synonyms":[{"name":"tridecane metabolism","type":"exact"}],"termid":"GO:1900631"}


id: PBO:0085576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 20S proteasome assembly; forms a heterodimer with Pba1p that binds to proteasome precursors; interaction with Pba1p-Add66p may affect function of the mature proteasome and its role in maintaining respiratory metabolism; similar to human PAC2 constituent of the PAC1-PAC2 complex involved in proteasome assembly","termid":"PBO:0085576"}


id: FYPO:0004951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Brc1 accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:26368543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Brc1 foci","synonyms":[{"name":"increased number of Brc1 foci during mitotic cell cycle","type":"related"},{"name":"increased number of Brc1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0004951"}


id: PBO:0073181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 3","termid":"PBO:0073181"}


id: MONDO:0013899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Weill-Marchesani syndrome in which the cause of the disease is a mutation in the LTBP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Weill-Marchesani syndrome","termid":"MONDO:0018096"},{"relation_name":"is_a","term_name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Weill-Marchesani syndrome 3","secondary_identifiers":["GARD:15844","OMIM:614819","UMLS:C3553785","MEDGEN:766699"],"synonyms":[{"name":"LTBP2 Weill-Marchesani syndrome","type":"exact"},{"name":"WMS3","type":"related"},{"name":"Weill-Marchesani syndrome 3","type":"exact"},{"name":"Weill-Marchesani syndrome 3, recessive","type":"exact"},{"name":"Weill-Marchesani syndrome caused by mutation in LTBP2","type":"exact"},{"name":"Weill-Marchesani syndrome type 3","type":"exact"}],"termid":"MONDO:0013899","xrefs":{"Monarch":{"xref_id":"0013899"}}}


id: GO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a nucleotide to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nucleotidylation","synonyms":[{"name":"protein amino acid nucleotidylation","type":"exact"}],"termid":"GO:0018175"}


id: PBO:0042283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1c molecule","termid":"PBO:0042283"}


id: GO:0035320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the site in the cell of an imaginal disc-derived wing at which a prehair initiates outgrowth. Restriction of prehair initiation to the distalmost part of a cell is essential to ensure that each wing epithelial cell produces one adult hair that points distally.","definition_xrefs":["PMID:8947551","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"},{"relation_name":"part_of","term_name":"establishment of imaginal disc-derived wing hair orientation","termid":"GO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"imaginal disc-derived wing hair site selection","synonyms":[{"name":"prehair localization","type":"related"},{"name":"wing hair site selection","type":"exact"}],"termid":"GO:0035320"}


id: PBO:0039290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG5 dolichyl-phosphate beta-glucosyltransferase","termid":"PBO:0039290"}


id: PBO:0069682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 959, pseudogene","termid":"PBO:0069682"}


id: PBO:0017901
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by rat PEMT","termid":"PBO:0017901"}


id: PBO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 34","termid":"PBO:0071896"}


id: GO:0047282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-L-dihydrostreptose + streptidine 6-phosphate = O-(1->4)-alpha-L-dihydrostreptosyl-streptidine 6-phosphate + dTDP + H+.","definition_xrefs":["RHEA:24392","EC:2.4.2.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"dTDP-dihydrostreptose-streptidine-6-phosphate dihydrostreptosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04222","MetaCyc:2.4.2.27-RXN"],"synonyms":[{"name":"dTDP-L-dihydrostreptose:streptidine-6-phosphate dihydrostreptosyltransferase activity","type":"related"},{"name":"dTDPdihydrostreptose-streptidine-6-phosphate dihydrostreptosyltransferase activity","type":"related"},{"name":"thymidine diphosphodihydrostreptose-streptidine 6-phosphate dihydrostreptosyltransferase activity","type":"related"}],"termid":"GO:0047282"}


id: MONDO:0015478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paramedian facial cleft (obsolete MONDO:0015478)","secondary_identifiers":["Orphanet:155867"],"synonyms":[{"name":"Tessier number 1-1 and 2-12 facial cleft","type":"exact"}],"termid":"MONDO:0015478","xrefs":{"Monarch":{"xref_id":"0015478"}}}


id: PBO:0028965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha,alpha-trehalase_activity_during_cellular_response_to_nutrient","termid":"PBO:0028965"}


id: PBO:0056026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 4","termid":"PBO:0056026"}


id: PBO:0079289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTLL7 intronic transcript 1","termid":"PBO:0079289"}


id: RO:0002551
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a segment or subdivision of an organism and the maximal subdivision of material entities that provides structural support for that segment or subdivision.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_skeleton","termid":"RO:0002551"}


id: GO:0071131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to laminin alpha-4.","definition_xrefs":["PMID:16824487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-laminin alpha-4 complex","synonyms":[{"name":"ITGAV-ITGB3-LAMA4 complex","type":"narrow"}],"termid":"GO:0071131"}


id: PBO:0091368
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency of long tract gene conversion in the rad57delta single mutant was suppressed in the swi5delta rad57delta double mutant, to a level similar to that observed in the rad51 mutant","termid":"PBO:0091368"}


id: PBO:0079182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 11, pseudogene","termid":"PBO:0079182"}


id: PR:O94529
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FACT complex subunit SSRP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03592","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit pob3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.05","secondary_identifiers":["UniProtKB:O94529"],"synonyms":[{"name":"Spom972h-SSRP1","type":"exact"},{"name":"facilitates chromatin transcription complex subunit pob3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94529"}


id: PBO:0027549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_non-fermentable_carbon_source","termid":"PBO:0027549"}


id: PBO:0060144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-methyltetrahydrofolate-homocysteine methyltransferase","termid":"PBO:0060144"}


id: PBO:0072550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pseudouridine synthase domain containing 2","termid":"PBO:0072550"}


id: FYPO:0001804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to caffeine. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell lysis during cellular response to caffeine (obsolete FYPO:0001804)","synonyms":[{"name":"cell lysis during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to caffeine","type":"exact"},{"name":"inviable, lysed cell during cellular response to caffeine","type":"exact"},{"name":"lysed cell in response to caffeine","type":"exact"}],"termid":"FYPO:0001804"}


id: MOD:01324
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:254#H","PubMed:7744761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +26","termid":"MOD:00577"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +26 - site H","synonyms":[{"name":"Acetaldehyde +26","type":"related"},{"name":"Delta:H(2)C(2)","type":"related"}],"termid":"MOD:01324"}


id: MONDO:0800439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder that involves more than one phenotype associated with the central nervous system, including but not limited to intellectual disability, autism, and seizures (epilepsy), and also a distinctive pattern of other features including dysmorphisms and/or congenital malformations.","direct_ancestors":[{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"syndromic complex neurodevelopmental disorder","termid":"MONDO:0800439","xrefs":{"Monarch":{"xref_id":"0800439"}}}


id: MONDO:1011156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marfan syndrome that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Marfan syndrome, non-human animal","termid":"MONDO:1010296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marfan syndrome, cattle","secondary_identifiers":["OMIA:000628-9913"],"termid":"MONDO:1011156","xrefs":{"Monarch":{"xref_id":"1011156"}}}


id: GO:0006179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates guanosine, guanine riboside, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside salvage","termid":"GO:0006166"},{"relation_name":"is_a","term_name":"guanosine biosynthetic process","termid":"GO:0046114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"guanosine salvage","synonyms":[{"name":"guanine, xanthine and their nucleoside salvage","type":"broad"}],"termid":"GO:0006179"}


id: GO:2000416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"regulates","term_name":"eosinophil migration","termid":"GO:0072677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil migration","termid":"GO:2000416"}


id: GO:0047638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: albendazole + H+ + NADPH + O2 = albendazole S-oxide + H2O + NADP+.","definition_xrefs":["RHEA:10796","EC:1.14.13.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"albendazole monooxygenase activity","secondary_identifiers":["MetaCyc:ALBENDAZOLE-MONOOXYGENASE-RXN","KEGG_REACTION:R03712"],"synonyms":[{"name":"albendazole oxidase activity","type":"related"},{"name":"albendazole sulfoxidase activity","type":"related"},{"name":"albendazole,NADPH:oxygen oxidoreductase (sulfoxide-forming)","type":"related"}],"termid":"GO:0047638"}


id: GO:0061763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organelle membrane fusion process in which the membrane of a multivesicular body fuses with a lysosome to create a hybrid organelle.","definition_xrefs":["GOC:pad","GOC:PARL","GOC:dph","PMID:21118109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"lysosomal membrane organization","termid":"GO:0097212"},{"relation_name":"part_of","term_name":"endosome to lysosome transport via multivesicular body sorting pathway","termid":"GO:0032510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"multivesicular body-lysosome fusion","synonyms":[{"name":"MVB-lysosome fusion","type":"exact"},{"name":"endosome-lysosome fusion","type":"related"},{"name":"fusion of MVB to lysosome","type":"exact"},{"name":"fusion of multivesicular body to lysosome","type":"exact"},{"name":"late endosome-lysosome fusion","type":"related"}],"termid":"GO:0061763"}


id: GO:0009982
data:
  {"annotated_genes":["SJAG_03572","SJAG_01172","SJAG_00319","SJAG_00088","SJAG_04754","SJAG_02978","SJAG_04065"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160153"},{"annotations":[116297,108197,97310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106032"},{"annotations":[96612,116298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106029"},{"annotations":[108198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160150"},{"annotations":[93158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160151"},{"annotations":[104447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in RNA = a pseudouridine in RNA. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["RHEA:48348","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_01172":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6787566","Reactome:R-HSA-8870289","Reactome:R-HSA-6782381","Reactome:R-HSA-9936243","Reactome:R-HSA-6786583","Reactome:R-HSA-6790905","GO:0016439","Reactome:R-HSA-9937369"],"termid":"GO:0009982","terms_by_termid":{"GO:0106029":null,"GO:0106032":null,"GO:0160148":null,"GO:0160150":null,"GO:0160151":null,"GO:0160153":null}}


id: PBO:0070118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 32 pseudogene","termid":"PBO:0070118"}


id: MONDO:0004824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection by any of the Candida species in a newborn infant up to 28 days old.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal candidiasis","secondary_identifiers":["UMLS:C0276682","ICD10CM:P37.5","DOID:9577","MEDGEN:547484","SCTID:414821002","ICD9:771.7","NCIT:C116810"],"synonyms":[{"name":"neonatal Candida infection","type":"exact"},{"name":"neonatal Monilia infection","type":"exact"},{"name":"neonatal candida infection","type":"exact"},{"name":"neonatal moniliasis","type":"exact"}],"termid":"MONDO:0004824","xrefs":{"Monarch":{"xref_id":"0004824"}}}


id: PBO:0017914
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YPD1","termid":"PBO:0017914"}


id: GO:0038003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by an opioid binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:bf","PMID:20494127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled opioid receptor signaling pathway","secondary_identifiers":["Wikipedia:Opioid_receptor"],"synonyms":[{"name":"opioid receptor signaling pathway","type":"broad"},{"name":"opioid receptor signalling pathway","type":"exact"}],"termid":"GO:0038003"}


id: PBO:0072631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and serine rich coiled-coil 1","termid":"PBO:0072631"}


id: GO:0062189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + N-(14,15-epoxy-5Z,8Z,11Z-eicosatrienoyl)-ethanolamine + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:21289075","RHEA:53148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anandamide epoxidase activity","termid":"GO:0062186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"anandamide 14,15 epoxidase activity","termid":"GO:0062189"}


id: GO:0019919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of methylation of peptidyl-arginine to form peptidyl-N(omega),N(omega)-dimethyl-L-arginine.","definition_xrefs":["RESID:AA0069","RESID:AA0068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine omega-N-methylation","termid":"GO:0035247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine methylation, to asymmetrical-dimethyl arginine","synonyms":[{"name":"peptidyl-arginine methylation, to unsymmetrical-dimethyl arginine","type":"exact"}],"termid":"GO:0019919"}


id: GO:0035955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of dipeptide transport by stopping, preventing or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:10850718","PMID:9427760","PMID:17005992","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035955)","synonyms":[{"name":"negative regulation of dipeptide transport by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of dipeptide transport by negative regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035955"}


id: FYPO:0001004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells to resume growth normally upon exiting G0 phase.","definition_xrefs":["PomBase:mah","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000004"],"is_obsolete":false,"name":"viable upon G0 to G1 transition","termid":"FYPO:0001004"}


id: GO:1902679
data:
  {"annotated_genes":["SJAG_00996","SJAG_02898","SJAG_04381","SJAG_02104","SJAG_01199","SJAG_02048","SJAG_02858","SJAG_02846","SJAG_00861","SJAG_03845","SJAG_01254","SJAG_00142","SJAG_04268","SJAG_00926","SJAG_00802","SJAG_01311","SJAG_05343","SJAG_04249","SJAG_00124","SJAG_03319","SJAG_02255","SJAG_00290","SJAG_04039","SJAG_04607","SJAG_00441","SJAG_01157","SJAG_03473","SJAG_04512","SJAG_03081","SJAG_04921","SJAG_01000","SJAG_01799","SJAG_04613","SJAG_00410","SJAG_00987","SJAG_00792","SJAG_01804","SJAG_02981","SJAG_02752","SJAG_04539","SJAG_03143","SJAG_02444","SJAG_01728","SJAG_04026","SJAG_01230","SJAG_01707","SJAG_02385","SJAG_02730","SJAG_04312","SJAG_04584","SJAG_00163","SJAG_00969","SJAG_01680","SJAG_00266","SJAG_03067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[103032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045892"},{"annotations":[96674,95689,78640,71990,94107,114968,113138,105508,100838,114086,108218,108700,106215,58537,107776,75918,96590,73771,103807,110549,116261,75113,75562,95832,109948,98238,107872,110209,77231,112713,110994,76191,119375,105910,93131,115827,94085,95241,95340,93203,96176,89538,81470,61947,79022,82336,72424,102958,108468,108720,74305,75692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[75677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[119937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO:jl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of RNA biosynthetic process","termid":"GO:2001141"},{"relation_name":"negatively_regulates","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02048":null,"SJAG_02104":null,"SJAG_02255":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03319":null,"SJAG_03473":null,"SJAG_03845":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04921":null,"SJAG_05343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA biosynthetic process","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"down regulation of RNA anabolism","type":"exact"},{"name":"down regulation of RNA biosynthesis","type":"exact"},{"name":"down regulation of RNA biosynthetic process","type":"exact"},{"name":"down regulation of RNA formation","type":"exact"},{"name":"down regulation of RNA synthesis","type":"exact"},{"name":"down-regulation of RNA anabolism","type":"exact"},{"name":"down-regulation of RNA biosynthesis","type":"exact"},{"name":"down-regulation of RNA biosynthetic process","type":"exact"},{"name":"down-regulation of RNA formation","type":"exact"},{"name":"down-regulation of RNA synthesis","type":"exact"},{"name":"downregulation of RNA anabolism","type":"exact"},{"name":"downregulation of RNA biosynthesis","type":"exact"},{"name":"downregulation of RNA biosynthetic process","type":"exact"},{"name":"downregulation of RNA formation","type":"exact"},{"name":"downregulation of RNA synthesis","type":"exact"},{"name":"inhibition of RNA anabolism","type":"narrow"},{"name":"inhibition of RNA biosynthesis","type":"narrow"},{"name":"inhibition of RNA biosynthetic process","type":"narrow"},{"name":"inhibition of RNA formation","type":"narrow"},{"name":"inhibition of RNA synthesis","type":"narrow"},{"name":"negative regulation of RNA anabolism","type":"exact"},{"name":"negative regulation of RNA biosynthesis","type":"exact"},{"name":"negative regulation of RNA formation","type":"exact"},{"name":"negative regulation of RNA synthesis","type":"exact"}],"termid":"GO:1902679","terms_by_termid":{"GO:0000122":null,"GO:0016480":null,"GO:0034244":null,"GO:0045892":null,"GO:0060195":null}}


id: MONDO:0020670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete antithrombin deficiency type 2 (obsolete MONDO:0020670)","secondary_identifiers":["MESH:C537779"],"synonyms":[{"name":"Inherited antithrombin deficiency type II","type":"related"},{"name":"antithrombin deficiency type 2","type":"exact"},{"name":"antithrombmin III deficiency Type II","type":"related"}],"termid":"MONDO:0020670","xrefs":{"Monarch":{"xref_id":"0020670"}}}


id: PBO:0077247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and death domain 1","termid":"PBO:0077247"}


id: FYPO:0001352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal in the vegetative growth phase of the life cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["GO:0006325","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal chromatin organization during vegetative growth","synonyms":[{"name":"abnormal chromatin organisation during vegetative growth","type":"exact"},{"name":"abnormal chromatin organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001352"}


id: PBO:0059060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1B","termid":"PBO:0059060"}


id: MOD:00740
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a manganese atom or a cluster containing manganese for hydrogen atoms, or that coordinates a manganese ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese containing modified residue","synonyms":[{"name":"MnRes","type":"exact"}],"termid":"MOD:00740"}


id: MONDO:0001414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal dominant inherited disorder characterized by the presence of small areas of increased density throughout the bones.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosclerosis","termid":"MONDO:0002933"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopoikilosis","secondary_identifiers":["MESH:D010023","DOID:11991","HP:0010739","ICD9:756.53","MEDGEN:45251","UMLS:C0029455","icd11.foundation:801926378","NANDO:2201024","SCTID:9147009","NCIT:C84985"],"synonyms":[{"name":"osteopathia condensans disseminata","type":"related"},{"name":"osteopoikilosis","type":"exact"},{"name":"osteopoikilosis (disease)","type":"exact"},{"name":"spotted bones","type":"related"}],"termid":"MONDO:0001414","xrefs":{"Monarch":{"xref_id":"0001414"}}}


id: GO:0043700
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which pteridine pigments are synthesized and stored. Pterinosomes are synthesized in xanthophores and erythrophore cells and are yellow, orange or red in appearance.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"pterinosome","termid":"GO:0043700"}


id: GO:0071561
data:
  {"annotated_genes":["SJAG_04552","SJAG_01329","SJAG_01116","SJAG_04221"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79170,108293,108995,117199],"is_not":false,"summary":null,"term":"GO:0071561"}]},"cv_name":"cellular_component","definition":"An organelle membrane contact site formed between the vacuole membrane and the outer nuclear membrane. In S. cerevisiae these contacts are mediated through direct physical interaction between Vac8p and Nvj1p.","definition_xrefs":["PMID:16806880","GOC:jp","PMID:16709156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01116":null,"SJAG_01329":null,"SJAG_04221":null,"SJAG_04552":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nucleus-vacuole junction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NV junction","type":"exact"},{"name":"NVJ","type":"exact"},{"name":"nucleus-vacuole membrane contact site","type":"exact"}],"termid":"GO:0071561","terms_by_termid":{"GO:0071561":null}}


id: PBO:0065774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl-peptide cyclotransferase like","termid":"PBO:0065774"}


id: GO:1903000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid transport across blood-brain barrier.","definition_xrefs":["GOC:TermGenie","GOC:sjp","PMID:24345162","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"regulates","term_name":"lipid transport across blood-brain barrier","termid":"GO:1990379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of lipid transport across blood-brain barrier","synonyms":[{"name":"regulation of lipid transport across blood brain barrier","type":"exact"}],"termid":"GO:1903000"}


id: FYPO:0000284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes unequal mitotic sister chromatid segregation, and as a result the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:8769419","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large and small daughter nuclei","termid":"FYPO:0006715"},{"relation_name":"output_of","term_name":"complete but unequal mitotic sister chromatid segregation","termid":"FYPO:0001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000641","FYPO:0002403","FYPO:0000631"],"is_obsolete":false,"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation","synonyms":[{"name":"complete but unequal mitotic sister chromatid segregation forming large and small daughter nuclei","type":"exact"},{"name":"large and small daughter nuclei resulting from unequal mitotic sister chromatid segregation","type":"related"},{"name":"large and small daughter nuclei, with complete but unequal mitotic sister chromatid segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal mitotic chromosome segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation, during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation, during vegetative growth","type":"exact"}],"termid":"FYPO:0000284"}


id: GO:0047830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N2-(D-1-carboxyethyl)-L-arginine + NAD+ + H2O = L-arginine + pyruvate + NADH.","definition_xrefs":["MetaCyc:D-OCTOPINE-DEHYDROGENASE-RXN","EC:1.5.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-octopine dehydrogenase activity","secondary_identifiers":["RHEA:16285"],"synonyms":[{"name":"2-N-(D-1-carboxyethyl)-L-arginine:NAD+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"D-octopine synthase activity","type":"related"},{"name":"N2-(D-1-carboxyethyl)-L-arginine:NAD+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"ODH activity","type":"related"},{"name":"octopine dehydrogenase activity","type":"related"},{"name":"octopine:NAD oxidoreductase activity","type":"related"}],"termid":"GO:0047830"}


id: PBO:0085796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; computational analysis of large-scale protein-protein interaction data suggests a possible role in actin cytoskeleton organization; potential Cdc28p substrate","termid":"PBO:0085796"}


id: PBO:0005724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle regulated GATA-type transcription factor Ams2","termid":"PBO:0005724"}


id: PATO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex quadrilateral is a parallelogram if and only if any one of the following statements are true:\\n1. Each diagonal divides the quadrilateral into two congruent triangles with the same orientation.\\n2. The opposite sides are congruent in pairs.\\n3. The diagonals bisect each other.\\n4. The opposite angles are congruent in pairs.\\n5. The sum of the squares of the sides equals the sum of the squares of the diagonals. (This is the parallelogram law)\\n6.It possesses rotational symmetry.\\n7.One pair of opposite sides are parallel and congruent.\\n8.Two pairs of adjacent angles are supplementary.","definition_xrefs":["wikipedia:Parallelogram"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parallelogram","termid":"PATO:0002317"}


id: PR:O14194
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ggt2 gene.","definition_xrefs":["UniProtKB:O14194","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.06c","synonyms":[{"name":"Spom972h-ggt2","type":"exact"},{"name":"gamma-glutamyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14194"}


id: GO:0070461
data:
  {"annotated_genes":["SJAG_04205","SJAG_03752","SJAG_00184","SJAG_01711","SJAG_02541","SJAG_02066","SJAG_03599","SJAG_04274","SJAG_03776","SJAG_00584","SJAG_00087","SJAG_02773","SJAG_00641","SJAG_03668","SJAG_01658","SJAG_02927","SJAG_02458","SJAG_04613","SJAG_01475"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64162,93355,118281,79053,67878,113740,78597,77460,105317,75399,73460,80757,119567,62896,72832,75853,58326,75684,90439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[58753,64164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A histone acetyltransferase complex that acetylates nucleosomal histones H2B, H3, or H4 and is required for the expression of a subset of Pol II-transcribed genes. This complex includes the acetyltransferases GCN5/KAT2A or PCAF/KAT2B, several proteins of the ADA, SGF and SPT families, and several TBP-associate proteins (TAFs).","definition_xrefs":["PMID:17337012","GOC:mah","PMID:10637607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase complex","termid":"GO:0000123"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SAGA-type complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"SAGA family complex","type":"exact"}],"termid":"GO:0070461","terms_by_termid":{"GO:0000124":null,"GO:0046695":null}}


id: MONDO:0004784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A asthma with a basis in a pathological type I hypersensitivity reaction.","definition_xrefs":["MONDO:patterns/allergic_form_of_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic respiratory disease","termid":"MONDO:0000771"},{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"allergic asthma","secondary_identifiers":["DOID:9415","icd11.foundation:1870104478","SCTID:389145006","ICD9:493.0","UMLS:C0155877","MEDGEN:102343"],"synonyms":[{"name":"allergic form of asthma","type":"exact"},{"name":"atopic asthma","type":"related"},{"name":"extrinsic asthma with acute exacerbation","type":"exact"},{"name":"extrinsic asthma with status asthmaticus","type":"exact"}],"termid":"MONDO:0004784","xrefs":{"Monarch":{"xref_id":"0004784"}}}


id: MONDO:0017540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postaxial polydactyly of toes, bilateral (obsolete MONDO:0017540)","secondary_identifiers":["Orphanet:295181"],"termid":"MONDO:0017540","xrefs":{"Monarch":{"xref_id":"0017540"}}}


id: MONDO:0013871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Seckel syndrome in which the cause of the disease is a mutation in the CEP63 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Seckel syndrome 6","secondary_identifiers":["MEDGEN:766496","OMIM:614728","UMLS:C3553582","DOID:0070006"],"synonyms":[{"name":"CEP63 Seckel syndrome","type":"exact"},{"name":"SCKL6","type":"exact"},{"name":"Seckel syndrome 6","type":"exact"},{"name":"Seckel syndrome caused by mutation in CEP63","type":"exact"},{"name":"Seckel syndrome type 6","type":"exact"}],"termid":"MONDO:0013871","xrefs":{"Monarch":{"xref_id":"0013871"}}}


id: GO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphorylated threonine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"phosphothreonine residue binding","synonyms":[{"name":"phosphothreonine binding","type":"related"}],"termid":"GO:0050816"}


id: PBO:0067144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 192, pseudogene","termid":"PBO:0067144"}


id: PBO:0090973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tat binding protein 1(TBP-1)-interacting protein (TBPIP) homolog","termid":"PBO:0090973"}


id: PBO:0089571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Oss1","termid":"PBO:0089571"}


id: PBO:0078321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 3","termid":"PBO:0078321"}


id: GO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by one or more rounds of nuclear division without cytokinesis.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation","termid":"GO:0006949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytium formation by mitosis without cytokinesis","synonyms":[{"name":"syncytium formation by mitosis without cell division","type":"related"}],"termid":"GO:0000769"}


id: MONDO:0006635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus acinetobacter.","definition_xrefs":["MESH:D000151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Moraxellaceae infectious disease","termid":"MONDO:0006878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acinetobacter infectious disease","secondary_identifiers":["MEDGEN:1299","DOID:3091","UMLS:C0001139","EFO:1000792"],"synonyms":[{"name":"Acinetobacter caused disease or disorder","type":"exact"},{"name":"Acinetobacter disease or disorder","type":"exact"},{"name":"Acinetobacter infection","type":"related"},{"name":"Mimae infection","type":"related"},{"name":"Mimae infections","type":"related"},{"name":"infection, Acinetobacter","type":"related"},{"name":"infection, Mimae","type":"related"},{"name":"infections, Acinetobacter","type":"related"},{"name":"infections, Mimae","type":"related"}],"termid":"MONDO:0006635","xrefs":{"Monarch":{"xref_id":"0006635"}}}


id: PBO:0078084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPC2L pseudogene 1","termid":"PBO:0078084"}


id: PBO:0028661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_during_sporulation","termid":"PBO:0028661"}


id: PBO:0117377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome large subunit assembly protein Mam33","termid":"PBO:0117377"}


id: GO:1990784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded DNA stimulus.","definition_xrefs":["PMID:10051633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dsDNA","synonyms":[{"name":"response to double-stranded DNA","type":"exact"}],"termid":"GO:1990784"}


id: MONDO:0009763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoventilation syndrome in very obese persons with excessive adipose tissue around the abdomen and diaphragm is characterized by diminished to absent ventilatory chemoresponsiveness; chronic hypoxia; hypercapnia; polycythemia; and long periods of sleep during day and night (hypersomnolence). It is a condition often related to obstructive sleep apnea but can occur separately.","definition_xrefs":["MESH:D010845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity-hypoventilation syndrome","secondary_identifiers":["MEDGEN:18472","OMIM:257500","UMLS:C0031880","SCTID:190966007","EFO:1001382","NANDO:1200752","ICD9:786.09"],"synonyms":[{"name":"Pickwickian syndrome","type":"related"},{"name":"obesity-hypoventilation syndrome","type":"exact"}],"termid":"MONDO:0009763","xrefs":{"Monarch":{"xref_id":"0009763"}}}


id: GO:0061697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-glutaryl-L-lysyl-[protein] + NAD+ + H2O = 2''-O-glutaryl-ADP-D-ribose + nicotinamide + L-lysyl-[protein].","definition_xrefs":["RHEA:47664","PMID:24703693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacylase activity","termid":"GO:0141218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-glutaryllysine deglutarylase activity","termid":"GO:0061697"}


id: MONDO:0019455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia characterized by bone marrow fibrosis without preexisting primary myelofibrosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute panmyelosis with myelofibrosis","secondary_identifiers":["ICD10CM:C94.4","ICDO:9931/3","GARD:11907","ICD9:289.89","MedDRA:10000879","MEDGEN:87279","icd11.foundation:585339631","NCIT:C4344","ONCOTREE:APMF","Orphanet:86843","icd11.foundation:1831346835","SCTID:109991003","UMLS:C0334674"],"synonyms":[{"name":"APMF","type":"exact"},{"name":"acute (malignant) myelofibrosis","type":"exact"},{"name":"acute (malignant) myelosclerosis","type":"exact"},{"name":"acute myelodysplasia with myelofibrosis","type":"exact"},{"name":"acute myelofibrosis","type":"exact"},{"name":"acute myelosclerosis","type":"exact"},{"name":"acute panmyelosis","type":"exact"}],"termid":"MONDO:0019455","xrefs":{"Monarch":{"xref_id":"0019455"}}}


id: MONDO:0100231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A susceptibility or predisposition to psoriatic arthritis, in which the cause of the disease is a mutation in the LTA gene. Psoriatic arthritis affects more than 10% of patients with psoriasis and, in most cases, there is an association between the severity of the arthritis and the skin involvement.","definition_xrefs":["MONDO:patterns/susceptibility_by_gene","OMIM:607507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psoriatic arthritis, susceptibility to","termid":"MONDO:0100232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriatic arthritis, susceptibility to, 1","secondary_identifiers":["UMLS:C1843772","MEDGEN:375279"],"synonyms":[{"name":"PSORAS1","type":"exact"},{"name":"psoriatic arthritis susceptibility caused by LTA","type":"exact"},{"name":"psoriatic arthritis, susceptibility to","type":"broad"},{"name":"psoriatic arthritis, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0100231","xrefs":{"Monarch":{"xref_id":"0100231"}}}


id: GO:0045651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of macrophage differentiation","termid":"GO:0045649"},{"relation_name":"positively_regulates","term_name":"macrophage differentiation","termid":"GO:0030225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage differentiation","synonyms":[{"name":"activation of macrophage differentiation","type":"narrow"},{"name":"stimulation of macrophage differentiation","type":"narrow"},{"name":"up regulation of macrophage differentiation","type":"exact"},{"name":"up-regulation of macrophage differentiation","type":"exact"},{"name":"upregulation of macrophage differentiation","type":"exact"}],"termid":"GO:0045651"}


id: GO:0031465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul4B subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by unknown subunits.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cul4-RING E3 ubiquitin ligase complex","termid":"GO:0080008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul4B-RING E3 ubiquitin ligase complex","synonyms":[{"name":"cullin-RING ligase 4B","type":"exact"}],"termid":"GO:0031465"}


id: SO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MNV that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"substitution_artifact","termid":"SO:0002176"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNV_artifact","synonyms":[{"name":"MNV artifact","type":"exact"}],"termid":"SO:0002179"}


id: PBO:0064659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4A","termid":"PBO:0064659"}


id: MONDO:0021571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple sclerosis, susceptibility to","termid":"MONDO:0007462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple sclerosis, susceptibility to 1","secondary_identifiers":["OMIM:126200","UMLS:C3888106","MEDGEN:854774"],"synonyms":[{"name":"MS","type":"related"},{"name":"MS1","type":"exact"},{"name":"disseminated sclerosis","type":"related"},{"name":"multiple sclerosis, disease progression, modifier of","type":"exact"},{"name":"multiple sclerosis, susceptibility to","type":"related"},{"name":"multiple sclerosis, susceptibility to, 1","type":"exact"},{"name":"susceptibility to multiple sclerosis","type":"related"}],"termid":"MONDO:0021571","xrefs":{"Monarch":{"xref_id":"0021571"}}}


id: GO:0033239
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170066"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"negatively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of amine metabolism","type":"exact"},{"name":"negative regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033239","terms_by_termid":{"GO:0170066":null}}


id: GO:0102932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + (-)-medicarpin + NADPH = (+)-vestitol + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pterocarpan reductase activity (obsolete GO:0102932)","termid":"GO:0102932"}


id: PBO:0080033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 19","termid":"PBO:0080033"}


id: PBO:0056701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 2","termid":"PBO:0056701"}


id: MONDO:0001818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuralgic syndromes which feature chronic or recurrent facial pain as the primary manifestation of disease. Disorders of the trigeminal and facial nerves are frequently associated with these conditions.","definition_xrefs":["MESH:D005156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"cranial neuralgia","termid":"MONDO:0016374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"facial neuralgia","secondary_identifiers":["MEDGEN:5099","SCTID:4151000119102","DOID:13865","UMLS:C0015467","EFO:0009380","ICD9:351.8"],"synonyms":[{"name":"facial nerve neuralgia","type":"exact"},{"name":"neuralgia of facial nerve","type":"exact"}],"termid":"MONDO:0001818","xrefs":{"Monarch":{"xref_id":"0001818"}}}


id: PBO:0061877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1 pseudogene 1","termid":"PBO:0061877"}


id: PBO:0069673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 950, pseudogene","termid":"PBO:0069673"}


id: GO:0018682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: atrazine + O2 + 2 H+ = deethylatrazine + acetaldehyde + H2O.","definition_xrefs":["UM-BBD_reactionID:r0127"],"gene_count":0,"genotype_count":0,"name":"obsolete atrazine N-dealkylase activity (obsolete GO:0018682)","synonyms":[{"name":"atrazine monooxygenase activity","type":"related"}],"termid":"GO:0018682"}


id: PBO:0038822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 28","termid":"PBO:0038822"}


id: PBO:0038781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACVR2B antisense RNA 1","termid":"PBO:0038781"}


id: MONDO:0019330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pili gemini defines a situation where the papilla's tip of a hair follicle splits during the anagen phase and consequently grows two hair shafts emerging through a single pilary canal. A papilla tip that divides in several tips will produce several hair shafts, a situation named pili multigemini. Pili gemini or multigemini can occur in each type of hair.","definition_xrefs":["Orphanet:79492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pili gemini","secondary_identifiers":["MEDGEN:42460","ICD9:704.8","UMLS:C0019571","GARD:19026","SCTID:42829009","MESH:C537188"],"synonyms":[{"name":"pili multigemini","type":"exact"}],"termid":"MONDO:0019330","xrefs":{"Monarch":{"xref_id":"0019330"}}}


id: GO:0102346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxycerotoyl-CoA(4-) = trans-2-hexacosenoyl-CoA(4-) + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.134"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-cerotoyl-CoA dehydratase activity (obsolete GO:0102346)","termid":"GO:0102346"}


id: GO:1990303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of UBR1 and RAD6 components. It polyubiquitinates proteins containing non-acetylated N-terminal residues causing their subsequent degradation by the proteasome as part of the Ac/N-End Rule pathway. It recognizes non-acetylated N-terminal methionine if it is followed by a hydrophobic residue. Additionally, it acts in an N-end rule independent manner as a component of a novel quality control pathway for proteins synthesized on cytosolic ribosomes.","definition_xrefs":["GOC:bhm","PMID:19531475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"UBR1-RAD6 ubiquitin ligase complex","synonyms":[{"name":"UBR1-RAD6 complex","type":"exact"}],"termid":"GO:1990303"}


id: GO:1902428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of water channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of water channel activity (obsolete GO:1902428)","synonyms":[{"name":"down regulation of aquaporin","type":"narrow"},{"name":"down regulation of water channel activity","type":"exact"},{"name":"down-regulation of aquaporin","type":"narrow"},{"name":"down-regulation of water channel activity","type":"exact"},{"name":"downregulation of aquaporin","type":"narrow"},{"name":"downregulation of water channel activity","type":"exact"},{"name":"inhibition of aquaporin","type":"narrow"},{"name":"inhibition of water channel activity","type":"narrow"},{"name":"negative regulation of aquaporin","type":"narrow"}],"termid":"GO:1902428"}


id: PR:O74543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A large neutral amino acids transporter small subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C777.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.04","secondary_identifiers":["UniProtKB:O74543"],"synonyms":[{"name":"Spom972h-SLC7A8","type":"exact"}],"termid":"PR:O74543"}


id: MONDO:0014132
data:
  {"annotated_genes":["SJAG_02306"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87940],"is_not":false,"summary":null,"term":"MONDO:0014132"}]},"cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the IBA57 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0002525"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815495","DOID:0080135","Orphanet:363424","GARD:17555","UMLS:C3809165","OMIM:615330"],"synonyms":[{"name":"IBA57 deficiency","type":"exact"},{"name":"IBA57 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"MMDS3","type":"related"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in IBA57","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 3","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome type 3","type":"exact"}],"termid":"MONDO:0014132","terms_by_termid":{"MONDO:0014132":null},"xrefs":{"Monarch":{"xref_id":"0014132"}}}


id: MONDO:0017466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudoarthrosis of the limbs","termid":"MONDO:0015525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the ulna","secondary_identifiers":["UMLS:C5679937","GARD:21207","MEDGEN:1843296","Orphanet:295026"],"synonyms":[{"name":"congenital pseudarthrosis of the ulna","type":"exact"}],"termid":"MONDO:0017466","xrefs":{"Monarch":{"xref_id":"0017466"}}}


id: PBO:0120987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASIC2 antisense RNA 2","termid":"PBO:0120987"}


id: PBO:0082356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atypical protein kinase; along with paralog, ALK2, required for proper spindle positioning and nuclear segregation following mitotic arrest, proper organization of cell polarity factors in mitosis, proper localization of formins and polarity factors, and survival in cells that activate spindle assembly checkpoint; regulates the morphogenesis checkpoint in response to polarity insults through inactivation of Mih1p; phosphorylated in response to DNA damage; similar to mammalian haspins","termid":"PBO:0082356"}


id: GO:0160159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of N-acetylmuramic acid catabolic process.","definition_xrefs":["PMID:18723630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"N-acetylmuramic acid catabolic process","termid":"GO:0097173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of N-acetylmuramic acid catabolic process","termid":"GO:0160159"}


id: GO:0004088
data:
  {"annotated_genes":["SJAG_00412","SJAG_00392","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72261,73791,108493],"is_not":false,"summary":null,"term":"GO:0004088"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogencarbonate + L-glutamine + 2 ATP + H2O = carbamoyl phosphate + L-glutamate + 2 ADP + phosphate + 2 H+.","definition_xrefs":["RHEA:18633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CARBPSYN-RXN","Reactome:R-HSA-73577","EC:6.3.5.5"],"synonyms":[{"name":"CPS activity","type":"related"},{"name":"GD-CPSase activity","type":"related"},{"name":"carbamoyl phosphate synthase (glutamine-hydrolyzing) activity","type":"exact"},{"name":"carbamoyl phosphate synthetase activity","type":"related"},{"name":"carbamoyl-phosphate synthase (glutamine-hydrolysing) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase (glutamine-hydrolysing) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"carbamoylphosphate synthetase II activity","type":"related"},{"name":"carbamyl phosphate synthetase (glutamine) activity","type":"related"},{"name":"carbon-dioxide::L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) activity","type":"related"},{"name":"glutamine-dependent carbamoyl-phosphate synthase activity","type":"related"},{"name":"glutamine-dependent carbamyl phosphate synthetase activity","type":"related"},{"name":"hydrogen-carbonate:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) activity","type":"related"}],"termid":"GO:0004088","terms_by_termid":{"GO:0004088":null}}


id: GO:0070524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NADP+ = an 11-oxosteroid + NADPH + H+.","definition_xrefs":["PMID:16216911","RHEA:11388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["Reactome:R-HSA-9759259","MetaCyc:11-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN","Wikipedia:11beta-hydroxysteroid_dehydrogenase","Reactome:R-HSA-9757706","EC:1.1.1.146"],"synonyms":[{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-beta-dehydrogenase activity","type":"related"}],"termid":"GO:0070524"}


id: PBO:0120906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidic acid transfer complex subunit Mdm35","termid":"PBO:0120906"}


id: GO:1902981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in mitotic DNA replication (obsolete GO:1902981)","synonyms":[{"name":"synthesis of RNA primer involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902981"}


id: FYPO:0002790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"vacuoles present in increased numbers","synonyms":[{"name":"additional vacuoles present","type":"exact"},{"name":"extra vacuoles","type":"exact"},{"name":"vacuoles present in greater numbers","type":"exact"}],"termid":"FYPO:0002790"}


id: GO:0061223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell differentiation","termid":"GO:0061223"}


id: GO:0018717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-phenanthrol + glucose = 9-phenanthryl-beta-D-glucopyranoside + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-phenanthrol glycosyltransferase activity (obsolete GO:0018717)","termid":"GO:0018717"}


id: MOD:01581
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01581"}


id: MONDO:0018117
data:
  {"annotated_genes":["SJAG_04323","SJAG_02885","SJAG_04178","SJAG_02305","SJAG_01356","SJAG_01918","SJAG_00404","SJAG_02119","SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88567,88566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013760"},{"annotations":[86908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[87845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[88230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012787"},{"annotations":[88267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011246"},{"annotations":[88877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008086"},{"annotations":[88981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013337"},{"annotations":[87603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008922"},{"annotations":[88209,88210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_01356":null,"SJAG_01918":null,"SJAG_02119":null,"SJAG_02305":null,"SJAG_02885":null,"SJAG_04110":null,"SJAG_04178":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680990","Orphanet:352301","GARD:21516","MEDGEN:1843236"],"termid":"MONDO:0018117","terms_by_termid":{"MONDO:0008086":null,"MONDO:0008922":null,"MONDO:0010155":null,"MONDO:0011246":null,"MONDO:0012787":null,"MONDO:0013337":null,"MONDO:0013584":null,"MONDO:0013760":null,"MONDO:0014417":null},"xrefs":{"Monarch":{"xref_id":"0018117"}}}


id: GO:0009655
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigment-protein complex primarily associated to PSII in higher plants, green algae and cyanobacteria that directly transfers electrons to the reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, core complex","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex","type":"narrow"},{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"narrow"},{"name":"PSII associated light-harvesting complex II, core complex, LHCIId subcomplex","type":"narrow"}],"termid":"GO:0009655"}


id: GO:0072383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"plus-end-directed organelle transport along microtubule","termid":"GO:0072386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"plus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule plus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule plus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072383"}


id: PBO:0029218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_rDNA","termid":"PBO:0029218"}


id: GO:0090062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trehalose metabolism, the chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"trehalose metabolic process","termid":"GO:0005991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of trehalose metabolic process","termid":"GO:0090062"}


id: PBO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN2 pseudogene 1","termid":"PBO:0047704"}


id: PBO:0052472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 17 pseudogene 1","termid":"PBO:0052472"}


id: PBO:0034613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy_at_centromere_central_core","termid":"PBO:0034613"}


id: GO:0075141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that contributes to the maintenance of a physiologic state in which the symbiont immune system does not react destructively against the components of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont tolerance to host environment (obsolete GO:0075141)","synonyms":[{"name":"maintenance of symbiont tolerance to host environment","type":"related"},{"name":"maintenance of symbiont tolerance to host iron concentration","type":"narrow"},{"name":"maintenance of symbiont tolerance to host osmotic environment","type":"narrow"},{"name":"maintenance of symbiont tolerance to host oxygen tension environment","type":"narrow"},{"name":"maintenance of symbiont tolerance to host pH environment","type":"narrow"},{"name":"maintenance of symbiont tolerance to host redox environment","type":"narrow"}],"termid":"GO:0075141"}


id: MONDO:0018310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langerhans cell histiocytosis (LCH) is a systemic disease associated with the proliferation and accumulation (usually in granulomas) of Langerhans cells in various tissues.","definition_xrefs":["Orphanet:389"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"splenic disorder","termid":"MONDO:0002332"},{"relation_name":"is_a","term_name":"histiocytosis","termid":"MONDO:0002637"},{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"dendritic cell tumor","termid":"MONDO:0020082"},{"relation_name":"is_a","term_name":"phagocytic cell dysfunction","termid":"MONDO:0024627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Langerhans cell histiocytosis","secondary_identifiers":["EFO:1000318","ICDO:9752/1","NORD:1348","ONCOTREE:LCH","ICDO:9754/3","SCTID:65399007","NANDO:2200031","icd11.foundation:216625985","UMLS:C0019621","ICD9:277.89","icd11.foundation:1388720498","MEDGEN:5568","ICD9:202.5","ICDO:9751/1","OMIM:604856","ICDO:9753/1","DOID:2571","ICDO:9751/3","MedDRA:10069698","NCIT:C3107","GARD:6858"],"synonyms":[{"name":"LCH","type":"exact"},{"name":"Langerhan's cell histiocytosis","type":"exact"},{"name":"Langerhans cell granulomatosis","type":"exact"},{"name":"Langerhans cell histiocytosis","type":"exact"},{"name":"Langerhans cell histiocytosis, NOS","type":"exact"},{"name":"Langerhans cell histiocytosis, Not otherwise specified","type":"exact"},{"name":"Langerhans-cell histiocytosis","type":"related"},{"name":"Lch","type":"related"},{"name":"histiocytosis X","type":"exact"},{"name":"letterer-Siwe disease involving intra-abdominal lymph nodes","type":"exact"},{"name":"letterer-Siwe disease involving intrapelvic lymph nodes","type":"exact"},{"name":"letterer-Siwe disease involving intrathoracic lymph nodes","type":"exact"},{"name":"letterer-Siwe disease involving lymph nodes of axilla and upper limb","type":"exact"},{"name":"letterer-Siwe disease involving lymph nodes of head, face and neck","type":"exact"},{"name":"letterer-Siwe disease involving lymph nodes of head, face, and neck","type":"exact"},{"name":"letterer-Siwe disease involving lymph nodes of inguinal region and lower limb","type":"exact"},{"name":"letterer-Siwe disease involving lymph nodes of multiple sites","type":"exact"},{"name":"letterer-Siwe disease involving spleen","type":"exact"},{"name":"letterer-Siwe disease of intra-abdominal lymph nodes","type":"exact"},{"name":"letterer-Siwe disease of intrapelvic lymph nodes","type":"exact"},{"name":"letterer-Siwe disease of intrathoracic lymph nodes","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of axilla and upper limb","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of axilla and/or upper limb","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of head, face and neck","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of head, face and/or neck","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of inguinal region amd/or lower limb","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of inguinal region and lower limb","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of inguinal region and/or lower limb","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of multiple sites","type":"exact"},{"name":"letterer-Siwe disease of spleen","type":"exact"}],"termid":"MONDO:0018310","xrefs":{"Monarch":{"xref_id":"0018310"}}}


id: GO:0016187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Internalization of the contents of a synaptic vesicle into the postsynaptic membrane following endocytosis.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle internalization (obsolete GO:0016187)","synonyms":[{"name":"synaptic vesicle internalization","type":"exact"}],"termid":"GO:0016187"}


id: PBO:0061901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid receptor kappa 1","termid":"PBO:0061901"}


id: PBO:0090120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsr1","termid":"PBO:0090120"}


id: GO:0090506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem initiation","termid":"GO:0010014"},{"relation_name":"part_of","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axillary shoot meristem initiation","synonyms":[{"name":"axillary bud meristem initiation","type":"related"}],"termid":"GO:0090506"}


id: FYPO:0002573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:22927644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Ssb1 foci","synonyms":[{"name":"increased number of RPA foci","type":"exact"},{"name":"increased number of Rad11 foci","type":"exact"},{"name":"increased number of Rpa1 foci","type":"exact"},{"name":"increased number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"increased number of Ssb1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0002573"}


id: PBO:0028348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028348"}


id: PBO:0039315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase","termid":"PBO:0039315"}


id: PBO:0062389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 10 pseudogene","termid":"PBO:0062389"}


id: PBO:0063465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor like","termid":"PBO:0063465"}


id: GO:0062233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of F2-isoprostane.","definition_xrefs":["PMID:16371369","PMID:25449649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"F2-isoprostane catabolic process","termid":"GO:0062233"}


id: FYPO:0006720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to osmotic stress is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to osmotic stress.","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to osmotic stress","synonyms":[{"name":"normal cell cycle delay following osmotic stress","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to osmotic stress","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006720"}


id: GO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process.","definition_xrefs":["GOC:dph","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140677","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"hormone activity","synonyms":[{"name":"cAMP generating peptide activity","type":"narrow"},{"name":"glycopeptide hormone","type":"narrow"},{"name":"lipopeptide hormone","type":"narrow"},{"name":"peptide hormone","type":"narrow"}],"termid":"GO:0005179"}


id: GO:0160286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of queuosine from one side of a membrane to the other according to the reaction: queuosine(out) = queuosine(in).","definition_xrefs":["PMID:40526720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"queuosine transmembrane transporter activity","termid":"GO:0160286"}


id: PATO:0001851
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's exhibiting transient abnormal enlargement, not due to cell proliferation.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"has_part","term_name":"protruding","termid":"PATO:0001598"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swollen","synonyms":[{"name":"swelling","type":"narrow"}],"termid":"PATO:0001851"}


id: PBO:0018270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrs1","termid":"PBO:0018270"}


id: MOD:00034
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues to form L-cystine.","definition_xrefs":["PubMed:2076469","PubMed:1988019","PubMed:7918467","PubMed:8344916","DeltaMass:0","PubMed:3083866","PubMed:366603","RESID:AA0025#CYS2","ChEBI:16283","PubMed:2001356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide crosslinked residues","termid":"MOD:00689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cystine (cross-link)","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cys2","type":"exact"},{"name":"Cystine ((Cys)2)","type":"exact"},{"name":"DISULFID","type":"exact"},{"name":"DISULFID Interchain","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"XLNK-SCys-SCys","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:00034"}


id: MONDO:0017283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"DeSanto-Shinawi syndrome due to WAC point mutation","termid":"MONDO:0014741"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 10","termid":"MONDO:0016892"},{"relation_name":"is_a","term_name":"DeSanto-Shinawi syndrome","termid":"MONDO:0018760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DeSanto-Shinawi Syndrome due to 10p11.21p12.31 microdeletion","secondary_identifiers":["Orphanet:284169","GARD:17311","MEDGEN:1681325","UMLS:C5190804"],"synonyms":[{"name":"10p12p11 microdeletion syndrome","type":"exact"},{"name":"Del(10)(p11.21p12.31)","type":"exact"},{"name":"deletion 10p11.21p12.31","type":"exact"},{"name":"facial dysmorphism-developmental delay-behavioral abnormalities syndrome due to 10p11.21p12.31 microdeletion","type":"exact"},{"name":"monosomy 10p11.21p12.31","type":"exact"}],"termid":"MONDO:0017283","xrefs":{"Monarch":{"xref_id":"0017283"}}}


id: MOD:01350
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:320#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolyzed N-ethylmaleimide adduct","termid":"MOD:00631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolyzed N-ethylmaleimide lysine adduct","synonyms":[{"name":"Nethylmaleimide+water","type":"related"},{"name":"Nethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:01350"}


id: PBO:0091640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing","termid":"PBO:0091640"}


id: FYPO:0004449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during mitosis","termid":"FYPO:0004357"},{"relation_name":"is_a","term_name":"decreased protein phosphorylation during meiotic cell cycle","termid":"FYPO:0005577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic metaphase","synonyms":[{"name":"decreased protein phosphorylation during metaphase of mitosis","type":"exact"},{"name":"decreased protein phosphorylation during mitotic metaphase during vegetative growth","type":"exact"},{"name":"decreased protein/peptide phosphorylation during mitotic metaphase","type":"exact"},{"name":"reduced protein phosphorylation during mitotic metaphase","type":"exact"}],"termid":"FYPO:0004449"}


id: GO:0042148
data:
  {"annotated_genes":["SJAG_00757","SJAG_03221","SJAG_03751","SJAG_04950","SJAG_02267","SJAG_01708","SJAG_02708","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74201,98862],"is_not":false,"summary":null,"term":"GO:0042148"},{"annotations":[112292,101008,109637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000708"},{"annotations":[90432,102508,80707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"DNA strand invasion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"D-loop biosynthesis","type":"related"},{"name":"D-loop formation","type":"related"},{"name":"Rad51-mediated strand invasion","type":"exact"},{"name":"displacement loop biosynthesis","type":"related"},{"name":"displacement loop formation","type":"related"},{"name":"strand invasion","type":"exact"}],"termid":"GO:0042148","terms_by_termid":{"GO:0000708":null,"GO:0010774":null,"GO:0042148":null}}


id: MONDO:1011950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondroma causing progressive posterior paresis, non-human animal","secondary_identifiers":["OMIA:000749"],"termid":"MONDO:1011950","xrefs":{"Monarch":{"xref_id":"1011950"}}}


id: FYPO:0000272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell fails to form a septum.","definition_xrefs":["PomBase:mah","PMID:9649519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished septum assembly","synonyms":[{"name":"abolished division septum assembly","type":"exact"},{"name":"abolished septation","type":"broad"},{"name":"abolished septum assembly during mitotic cell cycle","type":"related"},{"name":"abolished septum formation","type":"exact"},{"name":"septum assembly abolished","type":"exact"},{"name":"septum assembly abolished during vegetative growth","type":"exact"},{"name":"septum formation: absent","type":"related"},{"name":"septum initiation defective","type":"related"}],"termid":"FYPO:0000272"}


id: PBO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 58","termid":"PBO:0050355"}


id: PBO:0068497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 82, pseudogene","termid":"PBO:0068497"}


id: MONDO:0002931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival disorder","termid":"MONDO:0006170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctivochalasis","secondary_identifiers":["ICD10CM:H11.82","MEDGEN:678824","DOID:4250","icd11.foundation:870876723","ICD9:372.81","SCTID:408663001","UMLS:C0878693"],"termid":"MONDO:0002931","xrefs":{"Monarch":{"xref_id":"0002931"}}}


id: MONDO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gangliosidosis (obsolete MONDO:0002284)","termid":"MONDO:0002284","xrefs":{"Monarch":{"xref_id":"0002284"}}}


id: PBO:0070403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP9 pre-mRNA splicing factor","termid":"PBO:0070403"}


id: PBO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein","termid":"PBO:0001785"}


id: FYPO:0005850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions does not occur.","definition_xrefs":["PomBase:mah","PMID:27648579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to pericentric heterochromatin during vegetative growth","termid":"FYPO:0003074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"abolished protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"abolished protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"abolished protein localization at centromere otr","type":"exact"},{"name":"abolished protein localization at centromeric outer repeat region","type":"exact"},{"name":"abolished protein localization at pericentric region","type":"related"},{"name":"abolished protein localization at pericentromeric region","type":"related"},{"name":"abolished protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"abolished protein localization to chromatin at centromere otr","type":"exact"},{"name":"abolished protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"abolished protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"abolished protein localization to chromatin at pericentric region","type":"related"},{"name":"abolished protein localization to chromatin at pericentromeric region","type":"related"},{"name":"abolished protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"protein localization to heterochromatin at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0005850"}


id: PBO:0065996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene A","termid":"PBO:0065996"}


id: GO:0032920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of putrescine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine acetylation","termid":"GO:0032920"}


id: MONDO:0013012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 13q13.3","definition_xrefs":["DOID:0110902","PMID:18246054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 27","secondary_identifiers":["MESH:C567559","UMLS:C2748550","OMIM:612796","MEDGEN:412579"],"synonyms":[{"name":"IBD27","type":"exact"},{"name":"inflammatory bowel disease 27","type":"exact"},{"name":"inflammatory bowel disease type 27","type":"exact"}],"termid":"MONDO:0013012","xrefs":{"Monarch":{"xref_id":"0013012"}}}


id: PBO:0050088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 8","termid":"PBO:0050088"}


id: PBO:0089712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA synthetase Msf1","termid":"PBO:0089712"}


id: MONDO:0013099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypopituitarism is characterized by multiple pituitary hormone deficiency, including somatotroph, thyrotroph, lactotroph, corticotroph or gonadotroph deficiencies, due to mutations of pituitary transcription factors involved in pituitary ontogenesis. Congenital hypopituitarism is rare compared with the high incidence of hypopituitarism induced by pituitary adenomas, transsphenoidal surgery or radiotherapy.","definition_xrefs":["Orphanet:95494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hypopituitarism","termid":"MONDO:0005152"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"combined pituitary hormone deficiencies, genetic form","secondary_identifiers":["UMLS:C4273747","SCTID:718182008","OMIMPS:613038","MEDGEN:906592","GARD:10602","ICD10CM:E23.0"],"synonyms":[{"name":"combined pituitary hormone deficiencies, genetic forms","type":"related"},{"name":"familial congenital hypopituitarism","type":"exact"},{"name":"familial hypopituitarism","type":"related"},{"name":"genetic hypopituitarism","type":"exact"},{"name":"multiple pituitary hormone deficiencies, genetic forms","type":"exact"},{"name":"pituitary hormone deficiency, combined","type":"exact"}],"termid":"MONDO:0013099","xrefs":{"Monarch":{"xref_id":"0013099"}}}


id: MOD:01005
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-butylsulfenyl","synonyms":[{"name":"StBu","type":"exact"}],"termid":"MOD:01005"}


id: PBO:0081819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 12, Y-linked","termid":"PBO:0081819"}


id: PBO:0042074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 144A","termid":"PBO:0042074"}


id: GO:0102874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-16:0-2-18:2-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-16:0-2-18:3-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:17064923","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-16:0-2-18:2-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102874)","termid":"GO:0102874"}


id: MONDO:0003824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited condition characterized by the development of kidney oncocytomas which are often bilateral and multifocal. This condition may be connected to Birt-Hogg-Dube syndrome.","definition_xrefs":["NCIT:C8960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney oncocytoma","termid":"MONDO:0003825"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hereditary kidney oncocytoma","secondary_identifiers":["MEDGEN:209307","DOID:6244","UMLS:C0879606"],"synonyms":[{"name":"familial renal oncocytoma","type":"exact"},{"name":"hereditary kidney oncocytoma","type":"exact"},{"name":"hereditary renal oncocytoma","type":"exact"}],"termid":"MONDO:0003824","xrefs":{"Monarch":{"xref_id":"0003824"}}}


id: GO:0005651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete exportin (obsolete GO:0005651)","synonyms":[{"name":"exportin","type":"exact"}],"termid":"GO:0005651"}


id: PBO:0084103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanylyltransferase involved in mRNA 5' capping; subunit of mRNA capping enzyme, which is a heterotetramer composed of two molecules of Ceg1p and a homodimer of Cet1p, the mRNA 5'-triphosphatase subunit; nuclear import of Ceg1p requires interaction with Cet1p; mammalian capping enzyme is a single bifunctional polypeptide; human homolog RNGTT can complement yeast ceg1 null mutant","termid":"PBO:0084103"}


id: PBO:0040848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S2 pseudogene 1","termid":"PBO:0040848"}


id: PR:P05764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S21 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03124","PANTHER:PTHR10442:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.06","secondary_identifiers":["UniProtKB:P05764"],"synonyms":[{"name":"S28 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPS21","type":"exact"}],"termid":"PR:P05764"}


id: PBO:0031380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell","termid":"PBO:0031380"}


id: SO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone which is part of a tiling path. A tiling path is a set of sequencing substrates, typically clones, which have been selected in order to efficiently cover a region of the genome in preparation for sequencing and assembly.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clone","termid":"SO:0000151"},{"relation_name":"is_a","term_name":"tiling_path_fragment","termid":"SO:0000474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiling_path_clone","synonyms":[{"name":"tiling path clone","type":"exact"}],"termid":"SO:0000480"}


id: GO:0102837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:1-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102837)","termid":"GO:0102837"}


id: GO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to an RNA polymerase III (RNAP III) transcription factor and recruiting it to the transcription machinery complex in order to modulate transcription by RNAP III.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase III transcription factor recruiting (obsolete GO:0001153)","synonyms":[{"name":"RNA polymerase III transcription factor recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001153"}


id: MONDO:0022454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angiosarcoma of the scalp is a rare cancer which most commonly affects the elderly. This condition is characterized by bruise-like lesions that escalate to elevated, nodular, or ulcerated tumors. Extensive local growth is common and metastasis to regional lymph nodes and to the lungs may occur. The cause of angiosarcoma of the scalp is unknown, although several associations have been reported, including lymphedema, prior radiation treatment, and environmental exposures. Treatment may include surgery, radiation and chemotherapy.","definition_xrefs":["GARD:0005814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"angiosarcoma of the scalp","synonyms":[{"name":"angiosarcoma (disease) of scalp","type":"exact"},{"name":"scalp angiosarcoma (disease)","type":"exact"}],"termid":"MONDO:0022454","xrefs":{"Monarch":{"xref_id":"0022454"}}}


id: GO:0032280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that lacks an electron dense postsynaptic specialization. In vertebtrates, these occur primarily on dendrite shafts and neuronal cell bodies and involve persynapses containing clusters of predominantly flattened or elongated vesicles and are typically inhibitory.","definition_xrefs":["GOC:ef","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symmetric synapse","synonyms":[{"name":"Gray's type II synapse","type":"exact"}],"termid":"GO:0032280"}


id: GO:1903514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion from endoplasmic reticulum to cytosol.","definition_xrefs":["GOC:TermGenie","PMID:16402920","GO_REF:0000078","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by endoplasmic reticulum","synonyms":[{"name":"calcium ion transport from endoplasmic reticulum to cytosol","type":"broad"}],"termid":"GO:1903514"}


id: GO:0019476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine catabolic process","termid":"GO:0006554"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-lysine catabolic process","synonyms":[{"name":"D-lysine breakdown","type":"exact"},{"name":"D-lysine catabolism","type":"exact"},{"name":"D-lysine degradation","type":"exact"}],"termid":"GO:0019476"}


id: GO:1990519
data:
  {"annotated_genes":["SJAG_00154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81072],"is_not":false,"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The process in which a pyrimidine nucleotide is transported across the mitochondrial inner membrane, into the mitochondrial matrix.","definition_xrefs":["PMID:16194150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide transport","termid":"GO:0006864"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound transmembrane transport","termid":"GO:0072531"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"pyrimidine nucleotide import into mitochondrion","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mitochondrial pyrimidine nucleotide import","type":"exact"}],"termid":"GO:1990519","terms_by_termid":{"GO:1990519":null}}


id: PBO:0005379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase protein x component, Pdx1 (predicted)","termid":"PBO:0005379"}


id: MONDO:0001749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A senile cataract that involves the lens cortex.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"cortical cataract","termid":"MONDO:0045051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cortical senile cataract","secondary_identifiers":["DOID:13574","ICD9:366.15","MEDGEN:509748","SCTID:78875003","UMLS:C0154980"],"synonyms":[{"name":"cortical senile cataract","type":"exact"},{"name":"lens cortex senile cataract","type":"exact"},{"name":"senile cataract of lens cortex","type":"exact"}],"termid":"MONDO:0001749","xrefs":{"Monarch":{"xref_id":"0001749"}}}


id: PR:Q9C1X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-2-hydroxyglutarate dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02620","PRO:DNx","PANTHER:PTHR11748:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-lactate dehydrogenase C713.03, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.03","secondary_identifiers":["UniProtKB:Q9C1X2"],"synonyms":[{"name":"Spom972h-D2HGDH","type":"exact"}],"termid":"PR:Q9C1X2"}


id: PBO:0058760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6884","termid":"PBO:0058760"}


id: PBO:0082867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm G; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Sme1p, and Smx3p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm G","termid":"PBO:0082867"}


id: GO:0015643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a toxic substance, a poisonous substance that causes damage to biological systems.","definition_xrefs":["GOC:jl","GOC:curators","GOC:bf","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"toxic substance binding","synonyms":[{"name":"antitoxin activity","type":"related"},{"name":"lipoprotein antitoxin","type":"related"}],"termid":"GO:0015643"}


id: PR:G2TRQ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP23A10.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P23A10.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.17","synonyms":[{"name":"Spom972h-SPBP23A10.17","type":"exact"}],"termid":"PR:G2TRQ4"}


id: PBO:0028391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glyoxalase_III_activity","termid":"PBO:0028391"}


id: GO:0046211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-camphor, a bicyclic monoterpene ketone. Consists of the three reactions: (2E)-geranyl diphosphate = (2S,4R)-bornyl diphosphate, which is converted to (1R,2S,4R)-borneol + diphosphate, and then to (1R,4R)-camphor.","definition_xrefs":["PMID:42357","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid biosynthetic process","termid":"GO:0016099"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(+)-camphor biosynthetic process","synonyms":[{"name":"(+)-camphor anabolism","type":"exact"},{"name":"(+)-camphor biosynthesis","type":"exact"},{"name":"(+)-camphor formation","type":"exact"},{"name":"(+)-camphor synthesis","type":"exact"}],"termid":"GO:0046211"}


id: GO:0052502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont MAP kinase-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway (obsolete GO:0052502)","synonyms":[{"name":"activation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont MAPK-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont mitogen-activated protein kinase-mediated signal transduction pathway","type":"exact"},{"name":"stimulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"up regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"up-regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052502"}


id: GO:0001099
data:
  {"annotated_genes":["SJAG_03118","SJAG_00448","SJAG_01151","SJAG_04933","SJAG_02037","SJAG_00483","SJAG_00159","SJAG_00139","SJAG_01610","SJAG_00095","SJAG_04353"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[80075,74415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[80518,74187,72985,78151,57814,80529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[81083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001096"},{"annotations":[78050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery for RNA polymerase II which is composed of the RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits, and the basal RNA polymerase II transcription factors, the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal transcription machinery binding","termid":"GO:0001098"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00139":null,"SJAG_00159":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_02037":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"basal RNA polymerase II transcription machinery binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"basal RNAP II transcription machinery binding","type":"exact"}],"termid":"GO:0001099","terms_by_termid":{"GO:0000993":null,"GO:0001096":null,"GO:0001097":null,"GO:0099122":null,"GO:1990269":null}}


id: GO:1904015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:1505525","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to monoamine stimulus","termid":"GO:0071868"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to serotonin","termid":"GO:1904014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to serotonin","termid":"GO:1904015"}


id: MONDO:0044209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of complement activation, lectin pathway.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"disorder of lectin complement activation pathway","secondary_identifiers":["OMIMPS:614372"],"synonyms":[{"name":"complement activation, lectin pathway disease","type":"exact"},{"name":"disorder of complement activation, lectin pathway","type":"exact"}],"termid":"MONDO:0044209","xrefs":{"Monarch":{"xref_id":"0044209"}}}


id: MONDO:0013778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pseudohypoaldosteronism type 2 in which the cause of the disease is a mutation in the WNK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 2","termid":"MONDO:0019162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism type 2C","secondary_identifiers":["MEDGEN:327089","UMLS:C1840391","icd11.foundation:1052840113","GARD:16777","MESH:C564162","OMIM:614492","Orphanet:88940"],"synonyms":[{"name":"PHA2C","type":"exact"},{"name":"WNK1 pseudohypoaldosteronism type 2","type":"exact"},{"name":"pseudohypoaldosteronism type 2 caused by mutation in WNK1","type":"exact"},{"name":"pseudohypoaldosteronism, type 2C","type":"related"},{"name":"pseudohypoaldosteronism, type IIC","type":"related"}],"termid":"MONDO:0013778","xrefs":{"Monarch":{"xref_id":"0013778"}}}


id: PBO:0089389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c''","termid":"PBO:0089389"}


id: PBO:0043622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage oligomeric matrix protein","termid":"PBO:0043622"}


id: PBO:0076768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDRD6 and SLC25A27 antisense RNA 1","termid":"PBO:0076768"}


id: PBO:0079494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 15","termid":"PBO:0079494"}


id: GO:0015012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heparan sulfate proteoglycans, which consist of a core protein linked to a heparan sulfate glycosaminoglycan. The heparan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-N-acetyl-D-glucosamine-alpha-(1,4)-hexuronic acid, the former being either sulfated or deacetylated on its amino group as well as sulfated on one of its hydroxyl groups, and the latter being e a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids. Heparan sulfate chains are covalently linked to serine/threonine residues (O-linked) of the core protein via a tetrasaccharide linker sequence (xylose-galactose-galactose-glucuronate).","definition_xrefs":["PMID:27241222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"},{"relation_name":"is_a","term_name":"heparan sulfate proteoglycan metabolic process","termid":"GO:0030201"},{"relation_name":"is_a","term_name":"protein O-linked glycosylation via xylose","termid":"GO:0180064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heparan sulfate proteoglycan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6558","Reactome:R-HSA-2022928"],"synonyms":[{"name":"heparan sulfate proteoglycan anabolism","type":"exact"},{"name":"heparan sulfate proteoglycan biosynthesis","type":"exact"},{"name":"heparan sulfate proteoglycan formation","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthetic process","type":"exact"},{"name":"heparin proteoglycan biosynthetic process","type":"related"}],"termid":"GO:0015012"}


id: MONDO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral syndrome","secondary_identifiers":["SCTID:31273004","ICD9:597.81","DOID:13498","MEDGEN:510225","UMLS:C0156279"],"termid":"MONDO:0001730","xrefs":{"Monarch":{"xref_id":"0001730"}}}


id: MONDO:0025149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A transmissible spongiform encephalopathy of cattle associated with abnormal prion proteins in the brain. Affected animals develop excitability and salivation followed by ataxia. This disorder has been associated with consumption of scrapie infected ruminant derived protein. This condition may be transmitted to humans, where it is referred to as variant or new variant creutzfeldt-jakob syndrome. (Vet Rec 1998 Jul 25;143(41):101-5)","definition_xrefs":["MESH:D016643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"prion disease, non-human animal","termid":"MONDO:0700108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, bovine spongiform","synonyms":[{"name":"BSE (bovine spongiform encephalopathy)","type":"exact"},{"name":"BSEs (bovine spongiform encephalopathy)","type":"exact"},{"name":"Mad cow disease","type":"related"},{"name":"Mad cow diseases","type":"related"},{"name":"bovine spongiform encephalitis","type":"exact"},{"name":"bovine spongiform encephalopathy","type":"exact"},{"name":"encephalitis, bovine spongiform","type":"exact"},{"name":"spongiform encephalopathy, bovine","type":"exact"}],"termid":"MONDO:0025149","xrefs":{"Monarch":{"xref_id":"0025149"}}}


id: FYPO:0001972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a septated cell. Nuclear division, contractile ring formation and constriction, and septum assembly are apparently normal, but the septum does not degrade. Additional rounds of nuclear division and cytokinesis may take place, resulting in the formation of a multiseptate cell.","definition_xrefs":["PMID:12654901","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in septated cell","synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in septated cell during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in septated cell","type":"exact"},{"name":"abnormal septum digestion after cytokinesis resulting in septated cell","type":"exact"},{"name":"boomerang shaped","type":"related"}],"termid":"FYPO:0001972"}


id: MONDO:0009443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Harlequin ichthyosis (HI) is the most severe variant of autosomal recessive congenital ichthyosis (ARCI). It is characterized at birth by the presence of large, thick, plate-like scales over the whole body associated with severe ectropion, eclabium, and flattened ears, that later develops into a severe scaling erythroderma.","definition_xrefs":["Orphanet:457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis 4A","termid":"MONDO:0011026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 4B","secondary_identifiers":["DOID:0060713","SCTID:205548006","GARD:6568","UMLS:C0598226","MEDGEN:108615","MedDRA:10019163","NORD:1287","NCIT:C98934","OMIM:242500","NANDO:1200614","NANDO:2200992"],"synonyms":[{"name":"'Harlequin fetus'","type":"related"},{"name":"ARCI4B","type":"exact"},{"name":"HI","type":"exact"},{"name":"Harlequin Ichthyosis","type":"exact"},{"name":"Harlequin fetus","type":"related"},{"name":"Harlequin foetus","type":"related"},{"name":"autosomal recessive congenital ichthyosis type 4B","type":"exact"},{"name":"harlequin ichthyosis","type":"exact"},{"name":"harlequin type ichthyosis congenita","type":"exact"},{"name":"harlequin type ichthyosis fetalis","type":"exact"},{"name":"hi","type":"exact"},{"name":"ichthyosis , congenital, autosomal recessive 4b (harlequin)","type":"exact"},{"name":"ichthyosis congenita, Harlequin fetus type","type":"related"},{"name":"ichthyosis congenita, Harlequin foetus type","type":"related"},{"name":"ichthyosis congenita, Harlequin type","type":"exact"},{"name":"ichthyosis fetalis, Harlequin type","type":"exact"},{"name":"ichthyosis, congenital, autosomal recessive 4B","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 4B","type":"exact"}],"termid":"MONDO:0009443","xrefs":{"Monarch":{"xref_id":"0009443"}}}


id: PBO:0053052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 3","termid":"PBO:0053052"}


id: PBO:0043352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLPTM1L pseudogene 1","termid":"PBO:0043352"}


id: MONDO:0011966
data:
  {"annotated_genes":["SJAG_01025","SJAG_02160"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86940,86941],"is_not":false,"summary":null,"term":"MONDO:0011966"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"periventricular nodular heterotopia","termid":"MONDO:0020341"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01025":null,"SJAG_02160":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"periventricular heterotopia with microcephaly, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:334110","UMLS:C1842563","OMIM:608097","GARD:15424","MESH:C564292"],"synonyms":[{"name":"ARPHM","type":"related"},{"name":"heterotopia, periventricular, autosomal recessive","type":"related"},{"name":"periventricular heterotopia with microcephaly, autosomal recessive","type":"exact"},{"name":"periventricular nodular heterotopia 2","type":"related"}],"termid":"MONDO:0011966","terms_by_termid":{"MONDO:0011966":null},"xrefs":{"Monarch":{"xref_id":"0011966"}}}


id: GO:0071175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN1 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0071175"}


id: GO:0032578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an aleurone grain.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"aleurone grain","termid":"GO:0033095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"aleurone grain membrane","termid":"GO:0032578"}


id: GO:0034691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaE subunit and one beta7 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alphaE-beta7 complex","synonyms":[{"name":"Itgae-Itgb7 complex","type":"narrow"}],"termid":"GO:0034691"}


id: MONDO:0045040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"locational disease characteristic","termid":"MONDO:0045040","xrefs":{"Monarch":{"xref_id":"0045040"}}}


id: PBO:0053800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1055","termid":"PBO:0053800"}


id: PBO:0051021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 1","termid":"PBO:0051021"}


id: FYPO:0005226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of ubiquitinated protein in cell","synonyms":[{"name":"decreased accumulation of ubiquitinated protein in cell","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during vegetative growth","type":"exact"},{"name":"decreased level of ubiquitylated protein in cell","type":"exact"},{"name":"decreased ubiquitinated protein level during vegetative growth","type":"exact"},{"name":"reduced level of ubiquitinated protein in cell","type":"exact"}],"termid":"FYPO:0005226"}


id: PBO:0074165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G2","termid":"PBO:0074165"}


id: PBO:0069305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 561, pseudogene","termid":"PBO:0069305"}


id: PBO:0078798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 16-5","termid":"PBO:0078798"}


id: PBO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation protein Spo7","termid":"PBO:0001966"}


id: GO:0006038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall chitin biosynthetic process (obsolete GO:0006038)","synonyms":[{"name":"cell wall chitin anabolism","type":"exact"},{"name":"cell wall chitin biosynthesis","type":"exact"},{"name":"cell wall chitin formation","type":"exact"},{"name":"cell wall chitin synthesis","type":"exact"}],"termid":"GO:0006038"}


id: GO:1900973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sarcinapterin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of sarcinapterin metabolic process","termid":"GO:1900970"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin biosynthetic process","termid":"GO:1900971"},{"relation_name":"positively_regulates","term_name":"sarcinapterin biosynthetic process","termid":"GO:1900868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0042559"},{"rel_name":"regulates","termid":"GO:0042559"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0042559","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sarcinapterin biosynthetic process","synonyms":[{"name":"activation of sarcinapterin anabolism","type":"exact"},{"name":"activation of sarcinapterin biosynthesis","type":"exact"},{"name":"activation of sarcinapterin biosynthetic process","type":"narrow"},{"name":"activation of sarcinapterin formation","type":"exact"},{"name":"activation of sarcinapterin synthesis","type":"exact"},{"name":"positive regulation of sarcinapterin anabolism","type":"exact"},{"name":"positive regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"positive regulation of sarcinapterin formation","type":"exact"},{"name":"positive regulation of sarcinapterin synthesis","type":"exact"},{"name":"up regulation of sarcinapterin anabolism","type":"exact"},{"name":"up regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"up regulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"up regulation of sarcinapterin formation","type":"exact"},{"name":"up regulation of sarcinapterin synthesis","type":"exact"},{"name":"up-regulation of sarcinapterin anabolism","type":"exact"},{"name":"up-regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"up-regulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"up-regulation of sarcinapterin formation","type":"exact"},{"name":"up-regulation of sarcinapterin synthesis","type":"exact"},{"name":"upregulation of sarcinapterin anabolism","type":"exact"},{"name":"upregulation of sarcinapterin biosynthesis","type":"exact"},{"name":"upregulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"upregulation of sarcinapterin formation","type":"exact"},{"name":"upregulation of sarcinapterin synthesis","type":"exact"}],"termid":"GO:1900973"}


id: GO:0000376
data:
  {"annotated_genes":["SJAG_04738","SJAG_01517"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100657],"is_not":false,"summary":null,"term":"GO:0000376"},{"annotations":[100031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000372"}]},"cv_name":"biological_process","definition":"Splicing of RNA via a series of two transesterification reactions with exogenous guanosine as the initiating nucleophile.","definition_xrefs":["PMID:11377794","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions","termid":"GO:0000375"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01517":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA splicing, via transesterification reactions with guanosine as nucleophile","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000376","terms_by_termid":{"GO:0000372":null,"GO:0000376":null}}


id: MONDO:1012255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic syndrome, non-human animal","termid":"MONDO:1011860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic syndrome, sheep","secondary_identifiers":["OMIA:000929-9940"],"termid":"MONDO:1012255","xrefs":{"Monarch":{"xref_id":"1012255"}}}


id: PBO:0055290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2717","termid":"PBO:0055290"}


id: GO:0047435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-guanidino-2-oxopentanoate + H+ = 4-guanidinobutanal + CO2.","definition_xrefs":["RHEA:11340","EC:4.1.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"5-guanidino-2-oxopentanoate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03178","MetaCyc:4.1.1.75-RXN"],"synonyms":[{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase (4-guanidinobutanal-forming)","type":"related"},{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase activity","type":"related"},{"name":"2-oxo-5-guanidinopentanoate decarboxylase activity","type":"related"},{"name":"2-oxo-5-guanidinovalerate alpha-ketoarginine decarboxylase activity","type":"related"},{"name":"alpha-ketoarginine decarboxylase activity","type":"related"}],"termid":"GO:0047435"}


id: PBO:0085355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphomannomutase; involved in synthesis of GDP-mannose and dolichol-phosphate-mannose; required for folding and glycosylation of secretory proteins in the ER lumen; human homolog PMM2 complements yeast mutants","termid":"PBO:0085355"}


id: PBO:0004244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase proenzyme Spe2","termid":"PBO:0004244"}


id: PBO:0038440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoadipate aminotransferase","termid":"PBO:0038440"}


id: MONDO:0019816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anomaly of the tricuspid subvalvular apparatus (obsolete MONDO:0019816)","secondary_identifiers":["Orphanet:95463"],"termid":"MONDO:0019816","xrefs":{"Monarch":{"xref_id":"0019816"}}}


id: PBO:0044855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 136","termid":"PBO:0044855"}


id: GO:0097665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Mdm30 in S. cerevisiae.","definition_xrefs":["GOC:jd","GOC:vw","PMID:14747994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Mdm30 ubiquitin ligase complex","termid":"GO:0097665"}


id: PBO:0013815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog Lvs1 (predicted)","termid":"PBO:0013815"}


id: PR:O60114
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dhx29 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized helicase C15C4.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.05","synonyms":[{"name":"Spom972h-dhx29","type":"exact"}],"termid":"PR:O60114"}


id: MONDO:0018575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"}],"gene_count":0,"genotype_count":0,"name":"obsolete microcephalic primordial dwarfism-insulin resistance syndrome (obsolete MONDO:0018575)","secondary_identifiers":["Orphanet:436182"],"termid":"MONDO:0018575","xrefs":{"Monarch":{"xref_id":"0018575"}}}


id: PBO:0057004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 98","termid":"PBO:0057004"}


id: PBO:0065723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWP2 small subunit processome component","termid":"PBO:0065723"}


id: PBO:0049569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 6","termid":"PBO:0049569"}


id: PBO:0036401
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ6 with an S. pombe MTS","termid":"PBO:0036401"}


id: PBO:0038320
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_entrez_date","termid":"PBO:0038320"}


id: PBO:0029290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_DSR-containing_meiosis_gene_mRNA_during_vegetative_growth","termid":"PBO:0029290"}


id: PBO:0053865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1140","termid":"PBO:0053865"}


id: GO:0030949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor receptor signaling pathway","termid":"GO:0030947"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"activation of vascular endothelial growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of VEGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of VEGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of vascular endothelial growth factor receptor signalling pathway","type":"exact"},{"name":"stimulation of vascular endothelial growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of vascular endothelial growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0030949"}


id: SO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000082 processed_transcript_attribute (obsolete SO:0000082)","termid":"SO:0000082"}


id: MONDO:0020714
data:
  {"annotated_genes":["SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87606],"is_not":false,"summary":null,"term":"MONDO:0020714"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial myopathy, episodic, with optic atrophy and reversible leukoencephalopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1679560","OMIM:251900","UMLS:C5193223"],"termid":"MONDO:0020714","terms_by_termid":{"MONDO:0020714":null},"xrefs":{"Monarch":{"xref_id":"0020714"}}}


id: GO:0006774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete vitamin B12 reduction (obsolete GO:0006774)","synonyms":[{"name":"vitamin B12 reduction","type":"exact"}],"termid":"GO:0006774"}


id: MONDO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immune dysregulation disease with immunodeficiency (obsolete MONDO:0015710)","secondary_identifiers":["Orphanet:169361"],"termid":"MONDO:0015710","xrefs":{"Monarch":{"xref_id":"0015710"}}}


id: MONDO:1010488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in turkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, turkey","secondary_identifiers":["OMIA:001041-9103"],"termid":"MONDO:1010488","xrefs":{"Monarch":{"xref_id":"1010488"}}}


id: PR:P53694
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P53694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31A8.01c","synonyms":[{"name":"Spom972h-rtn1","type":"exact"},{"name":"cell lysis protein cwl1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P53694"}


id: PBO:0055490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2924","termid":"PBO:0055490"}


id: PBO:0040846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 1","termid":"PBO:0040846"}


id: GO:0099503
data:
  {"annotated_genes":["SJAG_04509","SJAG_01189"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[117465,89829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070382"}]},"cv_name":"cellular_component","definition":"A cytoplasmic, membrane bound vesicle that is capable of fusing to the plasma membrane to release its contents into the extracellular space.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01189":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"secretory vesicle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099503","terms_by_termid":{"GO:0070382":null}}


id: PBO:0071805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2","termid":"PBO:0071805"}


id: PBO:0054207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1587","termid":"PBO:0054207"}


id: GO:0055010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cardiac ventricle muscle is generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"},{"relation_name":"part_of","term_name":"cardiac ventricle morphogenesis","termid":"GO:0003208"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle tissue development","termid":"GO:0003229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle tissue morphogenesis","synonyms":[{"name":"cardiac ventricle muscle morphogenesis","type":"exact"},{"name":"ventricular heart muscle morphogenesis","type":"exact"}],"termid":"GO:0055010"}


id: PBO:0063810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1 pseudogene 2","termid":"PBO:0063810"}


id: PBO:0084931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein required for meiosis-specific mRNA splicing; required for chromosome pairing and meiotic recombination; Mer1p regulon embraces four essential meiotic pre-mRNAs: REC107, HFM1, AMA1 and SPO22","termid":"PBO:0084931"}


id: GO:1905364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosomal vesicle fusion.","definition_xrefs":["PMID:26911690","GOC:TermGenie","GOC:bc","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"regulates","term_name":"endosomal vesicle fusion","termid":"GO:0034058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of endosomal vesicle fusion","synonyms":[{"name":"regulation of endosome vesicle fusion","type":"exact"}],"termid":"GO:1905364"}


id: PR:Q09759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24H6.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.02c","synonyms":[{"name":"Spom972h-tim15","type":"exact"}],"termid":"PR:Q09759"}


id: PBO:0058645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6774","termid":"PBO:0058645"}


id: GO:0072102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the glomerulus are generated and organized. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus morphogenesis","termid":"GO:0072102"}


id: PR:O94350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC11E10.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.01","synonyms":[{"name":"CBL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC11E10.01","type":"exact"},{"name":"beta-cystathionase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cysteine lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94350"}


id: PBO:0086291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in endocytosis and vacuole integrity; peripheral membrane protein; interacts with and negatively regulates Arl1p; localizes to the endosome; member of the Sec7p family of proteins","termid":"PBO:0086291"}


id: PBO:0079430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon 1","termid":"PBO:0079430"}


id: GO:0061633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose into pyruvate, in which the glucose is converted to glucose-6-phosphate intermediate coupled to transmembrane transport.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process through glucose-6-phosphate","termid":"GO:0061620"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0005975","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"transport-coupled glycolytic process through glucose-6-phosphate","secondary_identifiers":["MetaCyc:GLYCOLYSIS"],"termid":"GO:0061633"}


id: GO:0005637
data:
  {"annotated_genes":["SJAG_03449","SJAG_03657","SJAG_01263","SJAG_05226","SJAG_05196","SJAG_01745","SJAG_00680","SJAG_03491"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72145,79751,95785,104768,105358,120180],"is_not":false,"summary":null,"term":"GO:0005637"},{"annotations":[77945,119562],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990862"}]},"cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inner membrane","termid":"GO:0019866"},{"relation_name":"is_a","term_name":"nuclear membrane","termid":"GO:0031965"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_01263":null,"SJAG_01745":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03657":null,"SJAG_05196":null,"SJAG_05226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear inner membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1612527463"],"synonyms":[{"name":"inner envelope","type":"broad"},{"name":"inner nuclear membrane","type":"exact"},{"name":"nucleus inner membrane","type":"exact"}],"termid":"GO:0005637","terms_by_termid":{"GO:0005637":null,"GO:1990862":null}}


id: FYPO:0004275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which any process of positive regulation of transcription is abnormal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal positive regulation of transcription","termid":"FYPO:0000623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"abnormal positive regulation of transcription during G0","synonyms":[{"name":"abnormal activation of gene-specific transcription during G0","type":"related"},{"name":"abnormal activation of transcription, DNA-dependent, during G0","type":"narrow"},{"name":"abnormal positive regulation of cellular transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal positive regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal positive regulation of transcription during cell quiescence","type":"exact"},{"name":"abnormal positive regulation of transcription during quiescence","type":"exact"},{"name":"abnormal positive regulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal stimulation of gene-specific transcription during G0","type":"narrow"},{"name":"abnormal stimulation of transcription, DNA-dependent, during G0","type":"narrow"},{"name":"abnormal up regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal up regulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal up-regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal up-regulation of transcription, DNA-dependent during G0","type":"exact"},{"name":"abnormal upregulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal upregulation of transcription, DNA-dependent, during G0","type":"exact"}],"termid":"FYPO:0004275"}


id: PBO:0080687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIZ pseudogene 1","termid":"PBO:0080687"}


id: PBO:0030854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_morphology_during_vegetative_growth","termid":"PBO:0030854"}


id: MONDO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pachydermodactyly, familial","secondary_identifiers":["MESH:C563947","UMLS:C1838218","MEDGEN:324974","OMIM:600356"],"synonyms":[{"name":"pachydermodactyly, familial","type":"exact"}],"termid":"MONDO:0010875","xrefs":{"Monarch":{"xref_id":"0010875"}}}


id: PBO:0058718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6846","termid":"PBO:0058718"}


id: GO:0030929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses ADPG pyrophosphorylase activity. In all organisms where it has been found, the complex is a tetramer. In bacteria, it is a homotetramer. In plants, the complex is a heterotetramer composed small and large subunits.","definition_xrefs":["GOC:tb","PMID:9680965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ADPG pyrophosphorylase complex","termid":"GO:0030929"}


id: PBO:0027560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0027560"}


id: GO:0071197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv alpha subunits 4.2 and 4.3.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Kv4.2-Kv4.3 channel complex","secondary_identifiers":["CORUM:609"],"termid":"GO:0071197"}


id: PBO:0034522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_arsenite","termid":"PBO:0034522"}


id: GO:0003019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurological process in which nerve impulses arising in the aorta or the carotid sinuses travel to the medulla and reach the nucleus of tractus solaris.","definition_xrefs":["ISBN:0323031951","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","termid":"GO:0001978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system control of baroreceptor feedback","termid":"GO:0003019"}


id: FYPO:0006862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which an RNA that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PMID:29424342","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"mislocalized RNA during vegetative growth","termid":"FYPO:0006861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"RNA mislocalized to cytoplasm during vegetative growth","synonyms":[{"name":"RNA mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"RNA mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"ectopic RNA localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006862"}


id: MONDO:0006523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory skin condition affecting children. It is often associated with Epstein-Barr virus infection, hepatitis B infection or cytomegalovirus infection. It is characterized by the presence of cutaneous rashes and patches on the palms and soles. The trunk is not affected.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acrodermatitis","secondary_identifiers":["MEDGEN:1301","MESH:D000169","UMLS:C0001197","NCIT:C84532","ICD9:686.8","CSP:4008-0032","DOID:2722","EFO:1000664","SCTID:8197001"],"termid":"MONDO:0006523","xrefs":{"Monarch":{"xref_id":"0006523"}}}


id: GO:0047721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (indol-3-yl)acetate + L-lysine + ATP = N(6)-[(indole-3-yl)acetyl]-L-lysine + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:14857","EC:6.3.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-3-acetic acid amido synthetase activity","termid":"GO:0010279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indoleacetate-lysine synthetase activity","secondary_identifiers":["MetaCyc:INDOLEACETATE--LYSINE-LIGASE-RXN","KEGG_REACTION:R03095"],"synonyms":[{"name":"(indol-3-yl)acetate:L-lysine ligase (ADP-forming)","type":"related"},{"name":"IAA-lysine synthetase activity","type":"related"},{"name":"N-(indole-3-acetyl)-L-lysine synthetase activity","type":"related"},{"name":"indoleacetate-lysine ligase activity","type":"exact"},{"name":"indoleacetate:L-lysine ligase (ADP-forming)","type":"related"}],"termid":"GO:0047721"}


id: GO:0036230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a granulocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:nhn","CL:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulocyte activation","termid":"GO:0036230"}


id: GO:0031597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome complex found in the cytosol of a cell.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"cytosolic proteasome complex","termid":"GO:0031597"}


id: PBO:0030412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_purvalanol_A","termid":"PBO:0030412"}


id: PBO:0078132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 12-3","termid":"PBO:0078132"}


id: FYPO:0004271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dissolution of the cell septum edging material is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cell septum edging catabolic process","synonyms":[{"name":"normal cell septum edging catabolic process during mitotic cell cycle","type":"related"},{"name":"normal cell septum edging catabolic process during vegetative growth","type":"exact"},{"name":"normal cell septum edging catabolism","type":"exact"},{"name":"normal cell septum edging hydrolysis","type":"exact"}],"termid":"FYPO:0004271"}


id: MOD:00658
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a methylated arginine, either 5-methylargine, N5-methylarginine, or an omega-N-methylated L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated arginine","synonyms":[{"name":"MeArg","type":"exact"}],"termid":"MOD:00658"}


id: PBO:0081659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 583","termid":"PBO:0081659"}


id: MONDO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Worster-Drought syndrome (WDS) is a form of cerebral palsy characterized by congenital pseudobulbar (suprabulbar) paresis manifesting as selective weakness of the lips, tongue and soft palate, dysphagia, dysphonia, drooling and jaw jerking.","definition_xrefs":["Orphanet:3465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Worster-Drought syndrome","secondary_identifiers":["SCTID:716335003","OMIM:185480","MESH:C536747","MEDGEN:163228","icd11.foundation:1834138618","GARD:5598","UMLS:C0796204","NANDO:1200558"],"synonyms":[{"name":"Worster Drought syndrome","type":"related"},{"name":"Worster-Drought syndrome","type":"exact"},{"name":"congenital suprabulbar paresis","type":"exact"},{"name":"suprabulbar paresis congenital","type":"related"},{"name":"suprabulbar paresis, congenital","type":"related"}],"termid":"MONDO:0008503","xrefs":{"Monarch":{"xref_id":"0008503"}}}


id: GO:0010639
data:
  {"annotated_genes":["SJAG_00266","SJAG_02451","SJAG_02169","SJAG_03126","SJAG_04126","SJAG_04884","SJAG_04287","SJAG_01716","SJAG_01825","SJAG_01993","SJAG_02336","SJAG_00855","SJAG_04259","SJAG_00279","SJAG_00364","SJAG_02592","SJAG_03353","SJAG_01297","SJAG_00883","SJAG_02392","SJAG_03455","SJAG_00845","SJAG_01330","SJAG_02700","SJAG_01894","SJAG_02795","SJAG_04638","SJAG_01787","SJAG_00823","SJAG_00460","SJAG_01837","SJAG_01082","SJAG_03072","SJAG_04999","SJAG_03327","SJAG_03681","SJAG_01680","SJAG_04203","SJAG_04699","SJAG_03591","SJAG_00369","SJAG_02838","SJAG_03438","SJAG_05978","SJAG_03048","SJAG_01679"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82069,94272,81020,77432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[105846,117899,109202,115780,92668,116267,113954,110230,101540],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[108283,116494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[91006,108586,118057,116257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[108285,101382,103755,116497,117557,111891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[76395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[100223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[119951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[118301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[108423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[112755,96317,97802,104321,105648,92714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[105234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[96146],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[109947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[108550,117335,108226,109379,108324,93693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[103414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061192"},{"annotations":[115785],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[118675],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[103297],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00279":null,"SJAG_00364":null,"SJAG_00369":null,"SJAG_00460":null,"SJAG_00823":null,"SJAG_00845":null,"SJAG_00855":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01716":null,"SJAG_01787":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02392":null,"SJAG_02451":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03072":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03455":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04203":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04638":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organelle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of organelle organisation","type":"exact"},{"name":"negative regulation of organelle organization and biogenesis","type":"related"}],"termid":"GO:0010639","terms_by_termid":{"GO:0007094":null,"GO:0010637":null,"GO:0034316":null,"GO:0045128":null,"GO:0045875":null,"GO:0051016":null,"GO:0051598":null,"GO:0061192":null,"GO:0090258":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1903500":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905560":null,"GO:2000432":null,"GO:2000816":null}}


id: PBO:0063774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 1","termid":"PBO:0063774"}


id: PBO:0091620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]reductase","termid":"PBO:0091620"}


id: FYPO:0006188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is decreased. Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PomBase:mah","PMID:19570908","PMID:20110347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"decreased rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"reduced rate of protein exchange in actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0006188"}


id: PBO:0054681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2089","termid":"PBO:0054681"}


id: PBO:0109258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120 member A opposite strand","termid":"PBO:0109258"}


id: PBO:0078584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 58","termid":"PBO:0078584"}


id: FYPO:0002071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a nucleus in an abnormal location. The normal location of a single nucleus is at the midpoint of the long axis of the cell (during mitotic telophase, daughter nuclei normally move away from the cell division site).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning during vegetative growth","termid":"FYPO:0001338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized nucleus during vegetative growth","synonyms":[{"name":"abnormal nucleus location during vegetative growth","type":"exact"},{"name":"abnormal nucleus position during vegetative growth","type":"exact"},{"name":"displaced nucleus during vegetative growth","type":"exact"},{"name":"mislocalised nucleus during vegetative growth","type":"exact"},{"name":"mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"misplaced nuclei during vegetative growth","type":"exact"},{"name":"misplaced nucleus during vegetative growth","type":"exact"},{"name":"nuclear displacement during vegetative growth","type":"exact"}],"termid":"FYPO:0002071"}


id: GO:0061911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amphisomes fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the amphisome.","definition_xrefs":["PMID:24219988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006914","GO:0006810"],"is_obsolete":false,"name":"amphisome-lysosome fusion","termid":"GO:0061911"}


id: MOD:02055
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-serine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-serine residue","synonyms":[{"name":"XlnkSer","type":"exact"}],"termid":"MOD:02055"}


id: GO:0061497
data:
  {"annotated_genes":["SJAG_07018","SJAG_01215","SJAG_05196","SJAG_03835","SJAG_02609","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102943,104760,110822,111582,112567,113421],"is_not":false,"summary":null,"term":"GO:0061497"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the inner plaque is in the nucleus.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner plaque of spindle pole body","termid":"GO:0005822"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02332":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_05196":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"inner plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061497","terms_by_termid":{"GO:0061497":null}}


id: MONDO:0005236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic disorder characterized by a localized collection of histiocytes containing lipid. Xanthomas usually occur in the skin and subcutaneous tissues, but occasionally they may involve the deep soft tissues.","definition_xrefs":["NCIT:C4071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"xanthoma","secondary_identifiers":["MEDGEN:86216","EFO:0003075","UMLS:C0302314","HP:0001114"],"synonyms":[{"name":"xanthoma","type":"exact"},{"name":"xanthoma (disease)","type":"exact"}],"termid":"MONDO:0005236","xrefs":{"Monarch":{"xref_id":"0005236"}}}


id: GO:0019140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myo-inositol = ADP + 1D-myo-inositol 3-phosphate.","definition_xrefs":["EC:2.7.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol 3-kinase activity","secondary_identifiers":["MetaCyc:MYO-INOSITOL-1-KINASE-RXN","RHEA:21804"],"synonyms":[{"name":"myo-inositol 1-kinase activity","type":"related"},{"name":"myo-inositol 3-kinase activity","type":"exact"},{"name":"myoinositol kinase activity","type":"broad"},{"name":"ATP:myo-inositol 1-phosphotransferase activity","type":"related"},{"name":"inositol 1-kinase activity","type":"related"},{"name":"inositol-1-kinase (phosphorylating)","type":"related"}],"termid":"GO:0019140"}


id: MONDO:0014998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital glaucoma","termid":"MONDO:0020366"},{"relation_name":"is_a","term_name":"TEK-related primary glaucoma","termid":"MONDO:0800182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3, primary congenital, E","secondary_identifiers":["MEDGEN:934606","OMIM:617272","UMLS:C4310639","GARD:18227"],"synonyms":[{"name":"GLC3E","type":"exact"},{"name":"glaucoma 3, primary congenital, E","type":"exact"},{"name":"glaucoma 3, primary congenital, E; GLC3E","type":"exact"},{"name":"glaucoma 3, primary congenital, type E","type":"exact"}],"termid":"MONDO:0014998","xrefs":{"Monarch":{"xref_id":"0014998"}}}


id: MONDO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the arteries that is characterized by the presence of granulomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulomatous angiitis","secondary_identifiers":["MEDGEN:9088","NCIT:C34653","UMLS:C0018202","MESH:D020293","DOID:2555"],"synonyms":[{"name":"Granulomatous arteritis","type":"exact"}],"termid":"MONDO:0002341","xrefs":{"Monarch":{"xref_id":"0002341"}}}


id: PBO:0089927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Rrp9","termid":"PBO:0089927"}


id: MONDO:0014658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of severe achondroplasia with developmental delay and acanthosis nigricans. It has been described in four unrelated individuals. Structural central nervous system anomalies, seizures and hearing loss were also reported, together with bowing of the clavicle, femur, tibia and fibula in some cases. The syndrome is caused by a Lys650Met substitution in the kinase domain of fibroblast growth factor receptor 3 (encoded by the FGFR3 gene; 4p16.3).","definition_xrefs":["Orphanet:85165"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with micromelia (obsolete MONDO:0018232)","termid":"MONDO:0018232"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"FGFR3-related chondrodysplasia","termid":"MONDO:0019685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"severe achondroplasia-developmental delay-acanthosis nigricans syndrome","secondary_identifiers":["UMLS:C2674173","ICD10CM:Q77.4","DOID:0111158","GARD:9443","OMIM:616482","ICD9:757.39","PMID:10053006","ICD9:783.40","SCTID:699870002","MEDGEN:393098"],"synonyms":[{"name":"SADDAN","type":"exact"},{"name":"SADDAN dysplasia","type":"exact"},{"name":"achondroplasia, severe, with developmental delay and acanthosis nigricans","type":"related"},{"name":"severe achondroplasia with developmental delay and acanthosis nigricans","type":"exact"}],"termid":"MONDO:0014658","xrefs":{"Monarch":{"xref_id":"0014658"}}}


id: PBO:0017714
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF1","termid":"PBO:0017714"}


id: GO:1905759
data:
  {"annotated_genes":["SJAG_02045","SJAG_03073","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98921,103390],"is_not":false,"summary":null,"term":"GO:1905759"},{"annotations":[93330],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"Any microtubule that is part of a post-anaphase microtubule array.","definition_xrefs":["PMID:11007487","GO_REF:0000064","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"post-anaphase microtubule array","termid":"GO:1990295"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_02695":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"post-anaphase array microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule of PAA","type":"exact"},{"name":"microtubule of post-anaphase array","type":"exact"},{"name":"microtubule of post-anaphase microtubule array","type":"exact"},{"name":"microtubuli of PAA","type":"exact"},{"name":"microtubuli of post-anaphase array","type":"exact"},{"name":"microtubuli of post-anaphase microtubule array","type":"exact"},{"name":"microtubulus of PAA","type":"exact"},{"name":"microtubulus of post-anaphase array","type":"exact"},{"name":"microtubulus of post-anaphase microtubule array","type":"exact"},{"name":"neurotubule of PAA","type":"narrow"},{"name":"neurotubule of post-anaphase array","type":"narrow"},{"name":"neurotubule of post-anaphase microtubule array","type":"narrow"}],"termid":"GO:1905759","terms_by_termid":{"GO:1905759":null,"GO:1905760":null}}


id: PBO:0049832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 3","termid":"PBO:0049832"}


id: MONDO:0022776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip and/or palate with mucous cysts of lower","termid":"MONDO:0022776","xrefs":{"Monarch":{"xref_id":"0022776"}}}


id: PBO:0113329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contributes to high inhibitor stress tolerance; deletion mutant is viable","termid":"PBO:0113329"}


id: PBO:0063724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor membrane component 2","termid":"PBO:0063724"}


id: PBO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase (predicted)","termid":"PBO:0000105"}


id: MONDO:0004298
data:
  {"annotated_genes":["SJAG_02261","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88992,88991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"}]},"cv_name":"mondo","definition":"A disease involving the stomach.","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02261":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"stomach disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C26886","UMLS:C0038354","SCTID:29384001","DOID:76","EFO:0009608","ICD9:537.89","ICD9:537.9","MESH:D013272","MEDGEN:21329"],"synonyms":[{"name":"disease of stomach","type":"exact"},{"name":"disease or disorder of stomach","type":"exact"},{"name":"disorder of stomach","type":"exact"},{"name":"gastric disease","type":"related"},{"name":"gastropathy","type":"exact"},{"name":"stomach disease","type":"exact"},{"name":"stomach disease or disorder","type":"exact"},{"name":"stomach disorder","type":"exact"}],"termid":"MONDO:0004298","terms_by_termid":{"MONDO:0001056":null},"xrefs":{"Monarch":{"xref_id":"0004298"}}}


id: PBO:0061385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 45","termid":"PBO:0061385"}


id: PBO:0005466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog4 (predicted)","termid":"PBO:0005466"}


id: PBO:0072643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTEL1-TNFRSF6B readthrough (NMD candidate)","termid":"PBO:0072643"}


id: PR:O94664
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug166 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 166 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.06","synonyms":[{"name":"Spom972h-mug166","type":"exact"}],"termid":"PR:O94664"}


id: FYPO:0003189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein import into the nucleus is decreased. Import of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nuclear import","termid":"FYPO:0000515"},{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"},{"relation_name":"is_a","term_name":"abnormal protein import into nucleus during vegetative growth","termid":"FYPO:0003188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein import into nucleus","synonyms":[{"name":"decreased protein import into nucleus during mitotic cell cycle","type":"related"},{"name":"decreased protein import into nucleus during vegetative growth","type":"exact"},{"name":"reduced protein import into nucleus","type":"exact"}],"termid":"FYPO:0003189"}


id: PBO:0056116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 1","termid":"PBO:0056116"}


id: MONDO:0008292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Punctate palmoplantar keratoderma type 2 is a type of isolated, punctate, hereditary palmoplantar keratoderma characterized by multiple, asymptomatic, 1 to 2 mm-long, firm, hyperkeratotic projections (\\\"spiny keratosis\\\") on the palms, soles and digits (typically confined to their volar and/or lateral aspects). Histopathologically, compact columnar parakeratosis over hypo- or agranular epidermis is observed.","definition_xrefs":["Orphanet:79502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma","termid":"MONDO:0017675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma type 2","secondary_identifiers":["GARD:4439","MEDGEN:356886","SCTID:765096001","OMIM:175860","DOID:0080213","UMLS:C1867982"],"synonyms":[{"name":"PPKP2","type":"exact"},{"name":"PPPP","type":"exact"},{"name":"keratoderma palmoplantar, punctate type 2","type":"related"},{"name":"palmoplantar keratoderma, punctate type II","type":"related"},{"name":"porokeratosis punctata palmaris Et plantaris","type":"related"},{"name":"punctate palmoplantar hyperkeratosis type 2","type":"exact"},{"name":"punctate palmoplantar keratoderma type II","type":"related"},{"name":"type 2 punctate PPK","type":"related"}],"termid":"MONDO:0008292","xrefs":{"Monarch":{"xref_id":"0008292"}}}


id: GO:1904393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle acetylcholine-gated channel clustering.","definition_xrefs":["GOC:TermGenie","PMID:7722643","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"regulates","term_name":"skeletal muscle acetylcholine-gated channel clustering","termid":"GO:0071340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle acetylcholine-gated channel clustering","synonyms":[{"name":"regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"}],"termid":"GO:1904393"}


id: GO:0072673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level and in which the structure of a lamellipodium is organized.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium organization","termid":"GO:0097581"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamellipodium morphogenesis","synonyms":[{"name":"lamellipodium organization","type":"related"}],"termid":"GO:0072673"}


id: FYPO:0005538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere-telomerase complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal telomere-telomerase complex assembly","synonyms":[{"name":"normal telomere-telomerase complex assembly during mitotic cell cycle","type":"related"},{"name":"normal telomere-telomerase complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005538"}


id: PATO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001039 absolute ratio (obsolete PATO:0001039)","termid":"PATO:0001039"}


id: PBO:0044986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 37","termid":"PBO:0044986"}


id: MONDO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease caused by infection with rickettsia conorii subsp. israelensis.","definition_xrefs":["PMID:18760001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsia conorii infectious disease","termid":"MONDO:0005677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Israeli tick typhus","secondary_identifiers":["DOID:0050043"],"synonyms":[{"name":"Israeli spotted fever","type":"related"}],"termid":"MONDO:0000230","xrefs":{"Monarch":{"xref_id":"0000230"}}}


id: MONDO:0008386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal dominant syndrome linked to mutations in the PITX2 gene. It is characterized by abnormalities in the anterior chamber of the eye and underdevelopment of the teeth.","definition_xrefs":["NCIT:C75015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Axenfeld-Rieger syndrome","termid":"MONDO:0019187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Axenfeld-Rieger syndrome type 1","secondary_identifiers":["DOID:0110120","GARD:10281","MEDGEN:811487","OMIM:180500","UMLS:C3714873"],"synonyms":[{"name":"Axenfeld-Rieger syndrome caused by mutation in PITX2","type":"exact"},{"name":"Axenfeld-Rieger syndrome type 1","type":"exact"},{"name":"Axenfeld-Rieger syndrome, type 1","type":"related"},{"name":"PITX2 Axenfeld-Rieger syndrome","type":"exact"},{"name":"RIEG1","type":"exact"},{"name":"Rgs","type":"related"},{"name":"Rieg","type":"related"},{"name":"Rieger syndrome type 1","type":"exact"},{"name":"Rieger syndrome, type 1","type":"related"}],"termid":"MONDO:0008386","xrefs":{"Monarch":{"xref_id":"0008386"}}}


id: MONDO:0019142
data:
  {"annotated_genes":["SJAG_04944","SJAG_02896","SJAG_01372","SJAG_04109","SJAG_05283","SJAG_01841","SJAG_02876","SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[87376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[87632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[87331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030048"},{"annotations":[87782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[87377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[87068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[87651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[88301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[88645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"Porphyrias constitute a group of eight hereditary metabolic diseases characterized by intermittent neuro-visceral manifestations, cutaneous lesions or by the combination of both.","definition_xrefs":["Orphanet:738"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"},{"relation_name":"is_a","term_name":"inborn disorder of porphyrin metabolism","termid":"MONDO:0017754"},{"relation_name":"is_a","term_name":"porphyria","termid":"MONDO:0037939"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01372":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"inherited porphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:698423","NCIT:C97096","MESH:D011164","MedDRA:10036181","NANDO:2200610","SCTID:371628009","SCTID:418470004","UMLS:C1275125","MedDRA:10061356","ICD9:277.1","DOID:13268","GARD:10353"],"synonyms":[{"name":"Hematoporphyria","type":"related"},{"name":"Porphyrinopathy","type":"related"},{"name":"disorder of porphyrin and hem metabolism","type":"exact"},{"name":"disorder of porphyrin and heme metabolism","type":"broad"},{"name":"disorder of porphyrin metabolism","type":"broad"},{"name":"hereditary porphyria","type":"exact"},{"name":"porphyria","type":"broad"}],"termid":"MONDO:0019142","terms_by_termid":{"MONDO:0007369":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0009902":null,"MONDO:0010420":null,"MONDO:0013000":null,"MONDO:0030048":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0019142"}}}


id: GO:0098770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the FBXO protein family. Members of this family have an F-box protein motif of approximately 50 amino acids that functions as a site of protein-protein interaction.","definition_xrefs":["PMID:11178263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"FBXO family protein binding","termid":"GO:0098770"}


id: MONDO:0010318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any FG syndrome in which the cause of the disease is a mutation in the CASK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG syndrome 4","secondary_identifiers":["UMLS:C1845546","OMIM:300422","MEDGEN:336965"],"synonyms":[{"name":"CASK FG syndrome","type":"exact"},{"name":"FG syndrome 4","type":"exact"},{"name":"FG syndrome caused by mutation in CASK","type":"exact"},{"name":"FG syndrome caused by mutation in cask","type":"exact"},{"name":"FG syndrome type 4","type":"exact"},{"name":"FGS4","type":"related"},{"name":"X-linked intellectual disability with or without nystagmus","type":"related"},{"name":"cask FG syndrome","type":"exact"},{"name":"intellectual disability, X-linked, with or without Nystagmus","type":"related"},{"name":"mental retardation, X-linked, with or without Nystagmus","type":"related"},{"name":"mental retardation, with or without nystagmus","type":"exact"}],"termid":"MONDO:0010318","xrefs":{"Monarch":{"xref_id":"0010318"}}}


id: PBO:0042800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP295 N-terminal like","termid":"PBO:0042800"}


id: GO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has aspartic-type endopeptidase activity and contains a presenilin catalytic subunit (either PSEN1 or PSEN2), an APH1 subunit (multiple genes and splice variants exist), nicastrin (NCT), and presenilin enhancer (aka PEN-2 or Psenen), as the core complex. Variants of the complex with different subunit compositions differ in localization and specific substrates. Additionally, variants of the complex exist that contain a additional regulatory subunit as well as the four core subunits; known regulatory subunits include gamma-secretase-activating protein (aka gSAP), TMP1 (aka TMED10), and CD147 antigen (aka basigin). Gamma-secretase cleaves type I transmembrane protein substrates, including the cell surface receptor Notch and the amyloid-beta precursor protein.","definition_xrefs":["PMID:28320827","PMID:32616437","PMID:17047368","GOC:krc","PMID:15890777","PMID:22122073","PMID:25565961","PMID:15286082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"gamma-secretase complex","synonyms":[{"name":"CD147-gamma-secretase complex (APH-1a, PS-1, PEN-2, NCT variant)","type":"narrow"},{"name":"PS1 complex","type":"narrow"},{"name":"PS2 complex","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN1, PSENEN, NCSTN variant)","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN1, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"presenilin complex","type":"exact"}],"termid":"GO:0070765"}


id: GO:0140129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 acetylated at lysine 56.","definition_xrefs":["PMID:23798425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090","GO:0140566"],"is_obsolete":false,"name":"histone H3K56ac reader activity","termid":"GO:0140129"}


id: PBO:0089401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation factor complex RNA-binding subunit Pcf11","termid":"PBO:0089401"}


id: PBO:0029187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_actin_filament_binding","termid":"PBO:0029187"}


id: SO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has an alanine anticodon, and a 3' alanine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"alanine_tRNA_primary_transcript","termid":"SO:0000211"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanyl_tRNA","synonyms":[{"name":"alanyl tRNA","type":"exact"},{"name":"alanyl-transfer RNA","type":"exact"},{"name":"alanyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000254"}


id: PBO:0088021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP A protein; homolog of human U1-A; involved in nuclear mRNA splicing","termid":"PBO:0088021"}


id: GO:0046819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins mediate their own secretion across the outer membrane through a beta-barrel pore structure formed by the C-terminal domain of the protein precursor. Following passage across the outer membrane, the mature protein is released from the pore by an autocatalytic activity. Proteins secreted by the Type V system are first translocated across the plasma membrane by the Sec pathway.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein secretion by the type V secretion system","synonyms":[{"name":"autotransporter system","type":"exact"},{"name":"protein secretion by the autotransporter system","type":"exact"},{"name":"protein secretion by the type V protein secretion system","type":"exact"},{"name":"type V protein secretion system","type":"exact"}],"termid":"GO:0046819"}


id: PBO:0089900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-pseudouridine synthase Deg1","termid":"PBO:0089900"}


id: PBO:0061845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncoprotein induced transcript 3","termid":"PBO:0061845"}


id: PBO:0073768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 1 adaptor protein pseudogene 2","termid":"PBO:0073768"}


id: GO:2000821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of grooming behavior.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"grooming behavior","termid":"GO:0007625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of grooming behavior","synonyms":[{"name":"regulation of grooming behaviour","type":"exact"}],"termid":"GO:2000821"}


id: PBO:0051783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F1","termid":"PBO:0051783"}


id: MONDO:1011824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horn cancer, non-human animal","secondary_identifiers":["OMIA:001859"],"termid":"MONDO:1011824","xrefs":{"Monarch":{"xref_id":"1011824"}}}


id: GO:1902326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chlorophyll biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23555952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chlorophyll biosynthetic process","synonyms":[{"name":"activation of chlorophyll anabolism","type":"narrow"},{"name":"activation of chlorophyll biosynthesis","type":"narrow"},{"name":"activation of chlorophyll biosynthetic process","type":"narrow"},{"name":"activation of chlorophyll formation","type":"narrow"},{"name":"activation of chlorophyll synthesis","type":"narrow"},{"name":"positive regulation of chlorophyll anabolism","type":"exact"},{"name":"positive regulation of chlorophyll biosynthesis","type":"exact"},{"name":"positive regulation of chlorophyll formation","type":"exact"},{"name":"positive regulation of chlorophyll synthesis","type":"exact"},{"name":"up regulation of chlorophyll anabolism","type":"exact"},{"name":"up regulation of chlorophyll biosynthesis","type":"exact"},{"name":"up regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"up regulation of chlorophyll formation","type":"exact"},{"name":"up regulation of chlorophyll synthesis","type":"exact"},{"name":"up-regulation of chlorophyll anabolism","type":"exact"},{"name":"up-regulation of chlorophyll biosynthesis","type":"exact"},{"name":"up-regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"up-regulation of chlorophyll formation","type":"exact"},{"name":"up-regulation of chlorophyll synthesis","type":"exact"},{"name":"upregulation of chlorophyll anabolism","type":"exact"},{"name":"upregulation of chlorophyll biosynthesis","type":"exact"},{"name":"upregulation of chlorophyll biosynthetic process","type":"exact"},{"name":"upregulation of chlorophyll formation","type":"exact"},{"name":"upregulation of chlorophyll synthesis","type":"exact"}],"termid":"GO:1902326"}


id: GO:0005085
data:
  {"annotated_genes":["SJAG_02248","SJAG_02027","SJAG_01309","SJAG_00143","SJAG_04837","SJAG_05210","SJAG_01659","SJAG_05184","SJAG_04491","SJAG_03600","SJAG_03246","SJAG_00807","SJAG_02160","SJAG_02486","SJAG_03089","SJAG_00514","SJAG_02471","SJAG_01025","SJAG_03705","SJAG_01367","SJAG_02819","SJAG_06588","SJAG_02368","SJAG_03142","SJAG_01415","SJAG_01699","SJAG_01576","SJAG_04982","SJAG_03678","SJAG_00216","SJAG_03581","SJAG_03704","SJAG_02493","SJAG_04653","SJAG_04615","SJAG_02529","SJAG_00064","SJAG_00858","SJAG_03002","SJAG_02833","SJAG_04010","SJAG_04771","SJAG_02307","SJAG_01030","SJAG_02004","SJAG_02645","SJAG_03488","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57447,57743,58115,61935,62976,66056,66640,67861,70337,71067,71688,71870,71913,72574,73332,73803,73890,74245,74379,75808,75822,76032,76556,77061,77451,79334,80052,80081,80473,80881,81379,81989,82290,92950,93144,94069,94720,95994,96268,99257,99674,99918,101057,108385,108967,110291,117535,118501],"is_not":false,"summary":null,"term":"GO:0005085"}]},"cv_name":"molecular_function","definition":"Stimulates the exchange of GDP to GTP on a signaling GTPase, changing its conformation to its active form. Guanine nucleotide exchange factors (GEFs) act by stimulating the release of guanosine diphosphate (GDP) to allow binding of guanosine triphosphate (GTP), which is more abundant in the cell under normal cellular physiological conditions.","definition_xrefs":["GOC:mah","GOC:kd","PMID:23303910","PMID:27218782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase regulator 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exchange factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-156913","GO:0030676","Reactome:R-HSA-418850","Reactome:R-HSA-5637806","Reactome:R-HSA-9640167","Reactome:R-HSA-9665707","Reactome:R-HSA-109817","Reactome:R-HSA-8876837","Reactome:R-HSA-392195","Reactome:R-HSA-9695853","Reactome:R-HSA-389348","Reactome:R-HSA-5655326","Reactome:R-HSA-2179407","Reactome:R-HSA-8876190","Reactome:R-HSA-9703441","Reactome:R-HSA-392054","Reactome:R-HSA-8851877","Reactome:R-HSA-6811418","Reactome:R-HSA-379048","Reactome:R-HSA-5655277","Reactome:R-HSA-9013159","Reactome:R-HSA-8980691","Reactome:R-HSA-8982640","GO:0005090","Reactome:R-HSA-399995","Reactome:R-HSA-442732","Reactome:R-HSA-2029451","Reactome:R-HSA-8875318","Reactome:R-HSA-5654663","Reactome:R-HSA-5623508","Reactome:R-HSA-5654426","Reactome:R-HSA-8877308","Reactome:R-HSA-9036301","Reactome:R-HSA-9634418","Reactome:R-HSA-1250463","Reactome:R-HSA-9666430","Reactome:R-HSA-8848618","Reactome:R-HSA-9664991","Reactome:R-HSA-381727","Reactome:R-HSA-428917","Reactome:R-HSA-8877612","Reactome:R-HSA-8876615","Reactome:R-HSA-2424477","Reactome:R-HSA-9013023","Reactome:R-HSA-5218829","Reactome:R-HSA-9032067","Reactome:R-HSA-2485180","Reactome:R-HSA-169904","Reactome:R-HSA-9665009","Reactome:R-HSA-9670436","Reactome:R-HSA-186834","Reactome:R-HSA-5654647","Reactome:R-HSA-9013435","Reactome:R-HSA-5654413","Reactome:R-HSA-1168636","Reactome:R-HSA-5654402","Reactome:R-HSA-203977","Reactome:R-HSA-751029","Reactome:R-HSA-4093336","Reactome:R-HSA-1250383","Reactome:R-HSA-5637808","Reactome:R-HSA-5672965","Reactome:R-HSA-8876193","Reactome:R-HSA-442314","Reactome:R-HSA-3928592","Reactome:R-HSA-9672170","Reactome:R-HSA-9624845","Reactome:R-HSA-8877311","Reactome:R-HSA-1433415","Reactome:R-HSA-389350","Reactome:R-HSA-418856","Reactome:R-HSA-9013143","Reactome:R-HSA-9018817","Reactome:R-HSA-2730840","Reactome:R-HSA-9014296","Reactome:R-HSA-9032798","Reactome:R-HSA-9665404","Reactome:R-HSA-9665408","Reactome:R-HSA-8877998","Reactome:R-HSA-9660824","Reactome:R-HSA-5218839","Reactome:R-HSA-9033292","Reactome:R-HSA-177938","Reactome:R-HSA-2029467","Reactome:R-HSA-3928642","Reactome:R-HSA-8877813","Reactome:R-HSA-379044","Reactome:R-HSA-8851827","Reactome:R-HSA-8876616","Reactome:R-HSA-400037","Reactome:R-HSA-180687","Reactome:R-HSA-6807868","Reactome:R-HSA-8850041","Reactome:R-HSA-442291","Reactome:R-HSA-9018747","Reactome:R-HSA-392870","Reactome:R-HSA-9029158","Reactome:R-HSA-1433471","Reactome:R-HSA-6811429","Reactome:R-HSA-8875591","Reactome:R-HSA-5686318","Reactome:R-HSA-9018768","Reactome:R-HSA-5694409","GO:0005086","Reactome:R-HSA-170979","Reactome:R-HSA-9018804","Reactome:R-HSA-9607304","Reactome:R-HSA-420883","Reactome:R-HSA-109807","GO:0016219","Reactome:R-HSA-400092","Reactome:R-HSA-2029445","Reactome:R-HSA-5654392","Reactome:R-HSA-5654618","Reactome:R-HSA-8875568","Reactome:R-HSA-205039","Reactome:R-HSA-8876191","Reactome:R-HSA-9639286","Reactome:R-HSA-350769","Reactome:R-HSA-749453","Reactome:R-HSA-939265","GO:0017034","Reactome:R-HSA-187746","Reactome:R-HSA-5218850","Reactome:R-HSA-380073","Reactome:R-HSA-9751201","Reactome:R-HSA-418579","Reactome:R-HSA-177945","GO:0017132","Reactome:R-HSA-825631","Reactome:R-HSA-8876454","Reactome:R-HSA-2424476","Reactome:R-HSA-5686071","Reactome:R-HSA-1225957","GO:0008321","Reactome:R-HSA-114544","Reactome:R-HSA-5617816","Reactome:R-HSA-3928651","Reactome:R-HSA-442273","Reactome:R-HSA-6811414","Reactome:R-HSA-9013109","Reactome:R-HSA-9680385","Reactome:R-HSA-3928632","Reactome:R-HSA-445064","Reactome:R-HSA-428750","Reactome:R-HSA-5655241","Reactome:R-HSA-3928612","Reactome:R-HSA-416530","GO:0017112","Reactome:R-HSA-5654600","GO:0019839","Reactome:R-HSA-419166","Reactome:R-HSA-5655347","GO:0008433","Reactome:R-HSA-8875320","Reactome:R-HSA-8876188","Reactome:R-HSA-1225951","Reactome:R-HSA-8877760","Reactome:R-HSA-3928633","Reactome:R-HSA-8982637","Reactome:R-HSA-9014433","Reactome:R-HSA-416588","Reactome:R-HSA-428535","Reactome:R-HSA-3965444","Reactome:R-HSA-9017491","Reactome:R-HSA-8877475","Reactome:R-HSA-1306972","Reactome:R-HSA-399938","Reactome:R-HSA-8877451","Reactome:R-HSA-9018825","GO:0005089","Reactome:R-HSA-9619803","Reactome:R-HSA-9665700","Reactome:R-HSA-8851899","Reactome:R-HSA-9666428","Reactome:R-HSA-9672163","Reactome:R-HSA-194518","Reactome:R-HSA-171026","Reactome:R-HSA-9693111","Reactome:R-HSA-354173","Reactome:R-HSA-210977","GO:0016220","Reactome:R-HSA-1250498","Reactome:R-HSA-8964604","Reactome:R-HSA-5623521","GO:0005088","Reactome:R-HSA-9026891","GO:0005087","Reactome:R-HSA-3928628"],"synonyms":[{"name":"ARF guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"GDP-dissociation stimulator activity","type":"exact"},{"name":"GDS","type":"exact"},{"name":"GEF","type":"exact"},{"name":"GNRP","type":"narrow"},{"name":"Rab guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rac guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ral guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ran guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rap guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ras guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rho guanine nucleotide exchange factor","type":"exact"},{"name":"Rho guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"RhoGEF","type":"exact"},{"name":"Sar guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"cAMP-dependent guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"guanyl-nucleotide release factor activity","type":"exact"},{"name":"guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:0005085","terms_by_termid":{"GO:0005085":null}}


id: PBO:0053693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 891","termid":"PBO:0053693"}


id: GO:0060468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of fertilization process that takes place as part of egg activation, ensuring that only a single sperm fertilizes the egg.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fertilization","termid":"GO:0060467"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prevention of polyspermy","synonyms":[{"name":"negative regulation of fertilization involved in egg activation","type":"exact"},{"name":"polyspermy block","type":"exact"}],"termid":"GO:0060468"}


id: PATO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coordinated","termid":"PATO:0000769"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased coordination","synonyms":[{"name":"high coordination","type":"exact"}],"termid":"PATO:0001859"}


id: MONDO:0013215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the TPRN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 79","secondary_identifiers":["GARD:22633","MEDGEN:413222","DOID:0110526","MESH:C567651","OMIM:613307","UMLS:C2750082"],"synonyms":[{"name":"DFNB79","type":"narrow"},{"name":"TPRN autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 79","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 79","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in TPRN","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 79","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 79","type":"exact"},{"name":"deafness, autosomal recessive 79","type":"narrow"},{"name":"deafness, autosomal recessive type 79","type":"narrow"}],"termid":"MONDO:0013215","xrefs":{"Monarch":{"xref_id":"0013215"}}}


id: MONDO:0014682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any thyroid cancer, nonmedullary in which the cause of the disease is a mutation in the HABP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"},{"relation_name":"is_a","term_name":"familial papillary or follicular thyroid carcinoma","termid":"MONDO:0017895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer, nonmedullary, 5","secondary_identifiers":["MEDGEN:895900","OMIM:616535","GARD:16133","UMLS:C4225292"],"synonyms":[{"name":"HABP2 thyroid cancer, nonmedullary","type":"exact"},{"name":"NMTC5","type":"related"},{"name":"thyroid cancer, nonmedullary caused by mutation in HABP2","type":"exact"},{"name":"thyroid cancer, nonmedullary, 5","type":"exact"},{"name":"thyroid cancer, nonmedullary, type 5","type":"exact"}],"termid":"MONDO:0014682","xrefs":{"Monarch":{"xref_id":"0014682"}}}


id: PBO:0109809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule crosslinking factor 2","termid":"PBO:0109809"}


id: GO:1901165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of trophoblast cell migration","termid":"GO:1901163"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trophoblast cell migration","synonyms":[{"name":"activation of trophoblast cell migration","type":"narrow"},{"name":"up regulation of trophoblast cell migration","type":"exact"},{"name":"up-regulation of trophoblast cell migration","type":"exact"},{"name":"upregulation of trophoblast cell migration","type":"exact"}],"termid":"GO:1901165"}


id: FYPO:0004965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is inviable, is shaped in the form of a pear, and has a larger volume than normal, in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable pear-shaped vegetative cell","termid":"FYPO:0002904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable swollen pear-shaped vegetative cell","synonyms":[{"name":"inviable enlarged pear-shaped vegetative cell","type":"related"},{"name":"inviable enlarged volume pear-shaped vegetative cell","type":"exact"},{"name":"inviable large pear-shaped vegetative cell","type":"related"},{"name":"inviable swollen ice cream cone-shaped vegetative cell","type":"exact"},{"name":"inviable swollen pear-shaped cell during vegetative growth","type":"exact"},{"name":"inviable swollen pear-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, increased pear-shaped vegetative cell size","type":"related"},{"name":"inviable, increased pear-shaped vegetative cell volume","type":"exact"},{"name":"lethal; swollen pear-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0004965"}


id: PBO:0063365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 5","termid":"PBO:0063365"}


id: MONDO:1011275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glaucoma that occurs in cats due to a mutation in the LTBP2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"glaucoma, domestic cat","termid":"MONDO:1011511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, LTBP2-related, domestic cat","secondary_identifiers":["OMIA:002017-9685"],"synonyms":[{"name":"glaucoma 3, primary congenital, domestic cat","type":"related"}],"termid":"MONDO:1011275","xrefs":{"Monarch":{"xref_id":"1011275"}}}


id: PR:Q9P6L7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rim2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C688.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.09","synonyms":[{"name":"Spom972h-rim2","type":"exact"}],"termid":"PR:Q9P6L7"}


id: GO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disaccharide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"},{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}


id: MOD:01171
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-acetyl-L-threonine.","definition_xrefs":["Unimod:1#T","PubMed:16728640","RESID:AA0423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetylated residue","termid":"MOD:00644"},{"relation_name":"is_a","term_name":"acetylated L-threonine","termid":"MOD:01186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl-L-threonine","synonyms":[{"name":"(2S,3R)-3-(acetyloxy)-2-aminobutanoic acid","type":"exact"},{"name":"ACT_SITE O-acetylthreonine intermediate","type":"exact"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES O-acetylthreonine","type":"exact"},{"name":"O-acetyl-L-threonine","type":"exact"},{"name":"O-acetylthreonine","type":"exact"},{"name":"OAcThr","type":"exact"},{"name":"threonine acetate ester","type":"exact"}],"termid":"MOD:01171"}


id: PBO:0085348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase C; hydrolyzes phosphatidylinositol 4,5-biphosphate (PIP2) to generate the signaling molecules inositol 1,4,5-triphosphate (IP3) and 1,2-diacylglycerol (DAG); involved in regulating many cellular processes; Plc1p and inositol polyphosphates are required for acetyl-CoA homeostasis which regulates global histone acetylation","termid":"PBO:0085348"}


id: MONDO:0019407
data:
  {"annotated_genes":["SJAG_01071"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88292],"is_not":false,"summary":null,"term":"MONDO:0019407"}]},"cv_name":"mondo","definition":"A bone development disease characterized by early developmental delay primarily involving speech, distinct facial features, short stature, brachydactyly, clubfoot deformities, cataracts, and microcephaly that has material basis in heterozygous mutation in COG4 on chromosome 16q22.1.","definition_xrefs":["ECO:0007645","PMID:30290151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"microcephalic osteodysplastic dysplasia, Saul-Wilson type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:722057","UMLS:C1300285","DOID:0111673","GARD:16736","Orphanet:85172","OMIM:618150","icd11.foundation:738688839"],"synonyms":[{"name":"SWILS","type":"exact"},{"name":"Saul-Wilson syndrome","type":"exact"},{"name":"microcephalic osteodysplastic dysplasia","type":"exact"},{"name":"microcephalic osteodysplastic dysplasia, Saul-Wilson type","type":"exact"}],"termid":"MONDO:0019407","terms_by_termid":{"MONDO:0019407":null},"xrefs":{"Monarch":{"xref_id":"0019407"}}}


id: MOD:01503
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01503"}


id: MONDO:0006747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease caused by the liberation of exotoxins of clostridium perfringens in the intestines of sheep, goats, cattle, foals, and piglets. Type B enterotoxemia in lambs is lamb dysentery; type C enterotoxemia in mature sheep produces 'struck', and in calves, lambs and piglets it produces hemorrhagic enterotoxemia; type D enterotoxemia in sheep and goats is pulpy-kidney disease or overeating disease.","definition_xrefs":["MESH:D004767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"goat disease","termid":"MONDO:0025003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterotoxemia","secondary_identifiers":["SCTID:370514003","EFO:1000922","ICD9:799.89"],"termid":"MONDO:0006747","xrefs":{"Monarch":{"xref_id":"0006747"}}}


id: MONDO:1010774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus, non-human animal","termid":"MONDO:1010138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pemphigus, horse","secondary_identifiers":["OMIA:001188-9796"],"termid":"MONDO:1010774","xrefs":{"Monarch":{"xref_id":"1010774"}}}


id: PBO:0073131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 3","termid":"PBO:0073131"}


id: GO:2000896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an amylopectin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amylopectin metabolic process","synonyms":[{"name":"Amylopectin metabolism","type":"exact"}],"termid":"GO:2000896"}


id: MONDO:0021514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pericardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of pericardium","termid":"MONDO:0021381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"benign neoplasm of pericardium","secondary_identifiers":["NCIT:C8536","UMLS:C0685118","MEDGEN:151928","SCTID:92289001","icd11.foundation:1296244385"],"synonyms":[{"name":"benign neoplasm of the pericardium","type":"exact"},{"name":"benign pericardial neoplasm","type":"exact"},{"name":"benign pericardial tumor","type":"exact"},{"name":"benign pericardial tumour","type":"exact"},{"name":"benign tumor of pericardium","type":"exact"},{"name":"benign tumor of the pericardium","type":"exact"},{"name":"benign tumour of pericardium","type":"exact"},{"name":"benign tumour of the pericardium","type":"exact"},{"name":"pericardium benign neoplasm","type":"exact"}],"termid":"MONDO:0021514","xrefs":{"Monarch":{"xref_id":"0021514"}}}


id: GO:0006569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process","termid":"GO:1902222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-tryptophan catabolic process","secondary_identifiers":["Reactome:R-HSA-71240"],"synonyms":[{"name":"tryptophan breakdown","type":"exact"},{"name":"tryptophan catabolic process","type":"related"},{"name":"tryptophan catabolic process, using tryptophanase","type":"narrow"},{"name":"tryptophan catabolism","type":"exact"},{"name":"tryptophan catabolism, using tryptophanase","type":"narrow"},{"name":"tryptophan degradation","type":"exact"}],"termid":"GO:0006569"}


id: PBO:0073300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 22","termid":"PBO:0073300"}


id: GO:0046527
data:
  {"annotated_genes":["SJAG_02222","SJAG_03764","SJAG_00876","SJAG_03656","SJAG_01288","SJAG_00394","SJAG_03587","SJAG_04571","SJAG_04236","SJAG_00129","SJAG_01950","SJAG_01427","SJAG_05285","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81885,115159,76673,77729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[80726,95293,103018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[119794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033840"},{"annotations":[117821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[81894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042283"},{"annotations":[70880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106073"},{"annotations":[79106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042281"},{"annotations":[68330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[81419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00394":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01950":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_04236":null,"SJAG_04571":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0046527","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004581":null,"GO:0033840":null,"GO:0042281":null,"GO:0042283":null,"GO:0106073":null,"GO:0140752":null}}


id: PBO:0049461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2 pseudogene 1","termid":"PBO:0049461"}


id: PBO:0087891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor that regulates middle-sporulation genes; required for mitotic repression of middle sporulation-specific genes; also acts as general replication initiation factor; involved in telomere maintenance, chromatin silencing; regulated by pachytene checkpoint","termid":"PBO:0087891"}


id: PBO:0113106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity kinase; required for SPB duplication and spindle checkpoint function in mitosis and meiosis; contributes to bi-orientation, promoting formation of force-generating kinetochore-microtubule attachments in meiosis I; autophosphorylation required for function; substrates include SPB proteins (Spc42p, Spc110p, Spc98p), mitotic exit network protein Mob1p, kinetochore protein Cnn1p, and checkpoint protein Mad1p; substrate of APCC(Cdh1); detected in peroxisomes; similar to human Mps1p","termid":"PBO:0113106"}


id: PBO:0120938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACOT4 pseudogene 1","termid":"PBO:0120938"}


id: PBO:0031754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_decreased_during_vegetative_growth","termid":"PBO:0031754"}


id: GO:0042438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanin metabolic process","termid":"GO:0006582"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"melanin biosynthetic process","secondary_identifiers":["Reactome:R-HSA-5662702"],"synonyms":[{"name":"melanin anabolism","type":"exact"},{"name":"melanin biosynthesis","type":"exact"},{"name":"melanin formation","type":"exact"},{"name":"melanin synthesis","type":"exact"}],"termid":"GO:0042438"}


id: MONDO:1010532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, rabbit","secondary_identifiers":["OMIA:000197-9986"],"termid":"MONDO:1010532","xrefs":{"Monarch":{"xref_id":"1010532"}}}


id: PR:O74458
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor 3C polypeptide 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04416","PANTHER:PTHR23082:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.14c","secondary_identifiers":["UniProtKB:O74458"],"synonyms":[{"name":"Spom972h-GTF3C3","type":"exact"},{"name":"TFIIIC subunit sfc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74458"}


id: PBO:0116411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type ATPase, potassium exporting Cta3","termid":"PBO:0116411"}


id: PBO:0089283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase Atp23","termid":"PBO:0089283"}


id: MONDO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Leber congenital amaurosis (obsolete MONDO:0002018)","termid":"MONDO:0002018","xrefs":{"Monarch":{"xref_id":"0002018"}}}


id: PBO:0074125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 8","termid":"PBO:0074125"}


id: MOD:00727
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a mannose group through a glycosidic bond,","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"mannosylated","synonyms":[{"name":"Man","type":"exact"}],"termid":"MOD:00727"}


id: GO:2000056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in digestive tract morphogenesis.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt signaling pathway involved in digestive tract morphogenesis (obsolete GO:2000056)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in digestive tract morphogenesis","type":"related"}],"termid":"GO:2000056"}


id: GO:0006931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of adhesions that stabilize protrusions at the leading edge of a migrating cell; involves integrin activation, clustering, and the recruitment of structural and signaling components to nascent adhesions.","definition_xrefs":["PMID:14657486","ISBN:0815316194","PMID:11944043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"substrate-dependent cell migration","termid":"GO:0006929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:0006931"}


id: MONDO:0018685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Incessant infant ventricular tachycardia is a rare type of ventricular tachycardia (VT) characterized by the presence of tachycardia originating from the ventricles, observed for more than 10% of a 24 hour monitoring period. Patients are either asymptomatic or present congestive heart failure.","definition_xrefs":["Orphanet:45453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"incessant infant ventricular tachycardia","secondary_identifiers":["ICD10CM:I47.2","icd11.foundation:1364925734","SCTID:233908008","UMLS:C0340487","GARD:18832","MEDGEN:573762"],"termid":"MONDO:0018685","xrefs":{"Monarch":{"xref_id":"0018685"}}}


id: PBO:0066507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X4","termid":"PBO:0066507"}


id: PBO:0071234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 75","termid":"PBO:0071234"}


id: GO:0070400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a D-alanyl ester of teichoic acid. Alanylation of teichoic acids modulates the properties of the bacterial cell wall and modulates the inflammatory properties of the teichoic acid.","definition_xrefs":["PMID:16020688","GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0071554","GO:0044281","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"teichoic acid D-alanylation","synonyms":[{"name":"teichoic acid alanylation","type":"exact"}],"termid":"GO:0070400"}


id: GO:0043989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an phosphate group to a serine residue at position 1 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-S1 phosphorylation (obsolete GO:0043989)","synonyms":[{"name":"histone H4 phosphorylation at S1","type":"exact"},{"name":"histone H4S1 phosphorylation","type":"exact"}],"termid":"GO:0043989"}


id: MOD:00581
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one (18)O atom for one (16)O atom.","definition_xrefs":["OMSSA:87","Unimod:258","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O substituted residue","termid":"MOD:00845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O monosubstituted residue","synonyms":[{"name":"Label:18O(1)","type":"related"},{"name":"O18 Labeling","type":"related"},{"name":"ctermpepo18","type":"exact"}],"termid":"MOD:00581"}


id: GO:0005831
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a steroid receptor associated with nonreceptor proteins, minimally a dimer of Hsp90 and a monomer of hsp56/FKBP59; forms in the absence of bound ligand.","definition_xrefs":["PMID:7493981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"steroid hormone aporeceptor complex","termid":"GO:0005831"}


id: GO:0031274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pseudopodium assembly","termid":"GO:0031272"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pseudopodium assembly","synonyms":[{"name":"activation of pseudopodium formation","type":"narrow"},{"name":"positive regulation of pseudopodium formation","type":"related"},{"name":"stimulation of pseudopodium formation","type":"narrow"},{"name":"up regulation of pseudopodium formation","type":"related"},{"name":"up-regulation of pseudopodium formation","type":"related"},{"name":"upregulation of pseudopodium formation","type":"related"}],"termid":"GO:0031274"}


id: GO:0044061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of excretion, the elimination by the host organism of the waste products that arise as a result of metabolic activity.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host excretion (obsolete GO:0044061)","synonyms":[{"name":"regulation by symbiont of host excretion","type":"exact"}],"termid":"GO:0044061"}


id: PR:O74773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA mismatch repair protein Msh2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein msh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.01c","secondary_identifiers":["UniProtKB:O74773"],"synonyms":[{"name":"Spom972h-MSH2","type":"exact"}],"termid":"PR:O74773"}


id: GO:0047879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6 malonyl-CoA + propionyl-CoA = 7 CoA + 6-deoxyerythronolide B.","definition_xrefs":["EC:2.3.1.94","MetaCyc:ERYTHRONOLIDE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"erythronolide synthase activity","secondary_identifiers":["RHEA:23068"],"synonyms":[{"name":"erythronolide condensing enzyme activity","type":"related"},{"name":"malonyl-CoA:propionyl-CoA malonyltransferase (cyclizing)","type":"related"}],"termid":"GO:0047879"}


id: MONDO:0005104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer cells are given a score of 1 to 3, with 1 being assigned when they look similar to normal cells and 3 being used when the cancer cells look very abnormal. Certain types of sarcoma are given a higher score automatically. See also NCIt:C9419 (Synonym of AJCC G1 Sarcoma)","definition_xrefs":["EFO:0000737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"aJCC grade 1 sarcoma","secondary_identifiers":["NCIT:C9419"],"synonyms":[{"name":"aJCC G1 sarcoma","type":"related"},{"name":"aJCC grade 1 sarcoma","type":"exact"},{"name":"aJCC grade I sarcoma","type":"related"},{"name":"well differentiated sarcoma","type":"related"}],"termid":"MONDO:0005104","xrefs":{"Monarch":{"xref_id":"0005104"}}}


id: PATO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer being shaped like a scute or an osteoderm.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scute-like","termid":"PATO:0002520"}


id: PR:Q9UT76
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00681","PANTHER:PTHR10233:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.14c","secondary_identifiers":["UniProtKB:Q9UT76"],"synonyms":[{"name":"Spom972h-EIF2B2","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT76"}


id: MONDO:1012967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver disorder, non-human animal","termid":"MONDO:1012967","xrefs":{"Monarch":{"xref_id":"1012967"}}}


id: PBO:0034739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase Qtrtd1/Qtr2","termid":"PBO:0034739"}


id: PBO:0090154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family Rrp1","termid":"PBO:0090154"}


id: PBO:0071650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 14","termid":"PBO:0071650"}


id: GO:1990469
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex found in Drosophila consisting of the gene products of cuff, del and rhi. It regulates the licensing of transcription of dual-strand PIWI interacting RNA (piRNA) source loci by binding to dual-strand-cluster chromatin, probably via the H3K9me3-binding activity of Rhi. Rhi binding brings the putative termination cofactor Cuff in close proximity to the nascent piRNA precursor transcript which it appears to protect from degradation.","definition_xrefs":["GOC:bhm","PMID:24906153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"PET complex","termid":"GO:1990923"},{"relation_name":"part_of","term_name":"germ cell nucleus","termid":"GO:0043073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Rhino-Deadlock-Cutoff Complex","synonyms":[{"name":"RDC complex","type":"exact"},{"name":"rhi-del-cuff complex","type":"exact"}],"termid":"GO:1990469"}


id: PBO:0091878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator Fub2","termid":"PBO:0091878"}


id: MONDO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Chandler syndrome (obsolete MONDO:0001311)","termid":"MONDO:0001311","xrefs":{"Monarch":{"xref_id":"0001311"}}}


id: PR:Q9Y7Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp15 gene.","definition_xrefs":["UniProtKB:Q9Y7Z7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L15, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.01c","synonyms":[{"name":"Spom972h-mrp15","type":"exact"}],"termid":"PR:Q9Y7Z7"}


id: SO:1001188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, but encodes only one polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_alternately_spliced_transcripts","termid":"SO:0000463"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_1_polypeptide","synonyms":[{"name":"encodes 1 polypeptide","type":"exact"}],"termid":"SO:1001188"}


id: PBO:0062281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 1 pseudogene","termid":"PBO:0062281"}


id: PBO:0047394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 34","termid":"PBO:0047394"}


id: PBO:0057424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR548X host gene","termid":"PBO:0057424"}


id: MONDO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the ovary and is characterized by the presence of malignant epithelial cells that, in well differentiated tumors, resemble the epithelium of the fallopian tube or, in poorly differentiated tumors, show anaplastic features and marked nuclear atypia.","definition_xrefs":["NCIT:C7550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"},{"relation_name":"is_a","term_name":"malignant ovarian serous tumor","termid":"MONDO:0024885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian serous adenocarcinoma","secondary_identifiers":["UMLS:C1335177","DOID:5744","MEDGEN:233278","EFO:0002917","ONCOTREE:SOC","DOID:0050933"],"synonyms":[{"name":"malignant ovarian serous tumour","type":"related"},{"name":"ovarian serous adenocarcinoma","type":"exact"},{"name":"ovarian serous carcinoma","type":"exact"},{"name":"ovary serous adenocarcinoma","type":"exact"},{"name":"serous adenocarcinoma of ovary","type":"exact"},{"name":"serous adenocarcinoma of the ovary","type":"exact"},{"name":"serous carcinoma of ovary","type":"exact"},{"name":"serous carcinoma of the ovary","type":"exact"},{"name":"serous ovarian cancer","type":"related"}],"termid":"MONDO:0005211","xrefs":{"Monarch":{"xref_id":"0005211"}}}


id: MONDO:0003622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually malignant pancreatic neuroendocrine tumor producing vasoactive intestinal peptide (VIP). It may or may not be associated with inappropriate secretion of VIP and an associated clinical syndrome.","definition_xrefs":["NCIT:C27454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"VIPoma","termid":"MONDO:0019960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic vasoactive intestinal peptide producing tumor","secondary_identifiers":["MEDGEN:453212","UMLS:C2033037","DOID:5741"],"synonyms":[{"name":"pancreatic VIP producing NET","type":"exact"},{"name":"pancreatic VIP producing neoplasm","type":"exact"},{"name":"pancreatic VIP producing tumor","type":"exact"},{"name":"pancreatic VIP producing tumour","type":"exact"},{"name":"pancreatic VIP-producing neuroendocrine tumor","type":"exact"},{"name":"pancreatic VIP-producing neuroendocrine tumour","type":"exact"},{"name":"pancreatic vasoactive intestinal peptide producing neoplasm","type":"exact"},{"name":"pancreatic vasoactive intestinal peptide producing tumor","type":"exact"}],"termid":"MONDO:0003622","xrefs":{"Monarch":{"xref_id":"0003622"}}}


id: GO:0002536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases following a stimulus as part of an inflammatory response; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, resulting in an increase in their intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"},{"relation_name":"is_a","term_name":"respiratory burst involved in defense response","termid":"GO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in inflammatory response","synonyms":[{"name":"oxidative burst during acute inflammatory response","type":"broad"},{"name":"production of reactive oxygen species during acute inflammatory response","type":"broad"},{"name":"respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002536"}


id: PBO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heat shock protein Hsp70","termid":"PBO:0001146"}


id: GO:0008258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Movement of the anterior ectoderm to the interior of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"head involution","termid":"GO:0008258"}


id: PBO:0083537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YBR131W; identified by gene-trapping, microarray analysis, and genome-wide homology searches","termid":"PBO:0083537"}


id: PBO:0067822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 124","termid":"PBO:0067822"}


id: GO:0150021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an apical dendrite are generated and organized.","definition_xrefs":["PMID:22683681","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"apical dendrite development","termid":"GO:0150022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical dendrite morphogenesis","termid":"GO:0150021"}


id: GO:0009549
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microfibril composed of cellulose arranged in orthogonal layers. Cellulose is a straight chain polysaccharide composed of B(14) linked glucose subunits. It is a major component of plant cell walls. Higher plant microfibrils are about 10nm in diameter and extremely long in relation to their width. The cellulose molecules are oriented parallel to the long axis of the microfibril in a paracrystalline array, which provides great tensile strength. The microfibrils are held in place by the wall matrix and their orientation is closely controlled by the cell.","definition_xrefs":["GOC:jid","ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"cellulose microfibril","termid":"GO:0009549"}


id: PBO:0067590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 751, pseudogene","termid":"PBO:0067590"}


id: MONDO:0014095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the LAMA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1JJ","secondary_identifiers":["UMLS:C3808935","OMIM:615235","DOID:0110438","GARD:15924","MEDGEN:815265"],"synonyms":[{"name":"CMD1JJ","type":"exact"},{"name":"LAMA4 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1JJ","type":"related"},{"name":"cardiomyopathy, dilated, type 1Jj","type":"exact"},{"name":"dilated cardiomyopathy type 1JJ","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in LAMA4","type":"exact"}],"termid":"MONDO:0014095","xrefs":{"Monarch":{"xref_id":"0014095"}}}


id: FYPO:0001335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of DNA-dependent transcription in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulation phenotype","termid":"FYPO:0000143"},{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"transcription regulation phenotype during vegetative growth","synonyms":[{"name":"fission yeast transcription regulation phenotype during vegetative growth","type":"exact"},{"name":"gene-specific transcription regulation phenotype during vegetative growth","type":"related"},{"name":"transcription regulation phenotype during mitotic cell cycle","type":"related"},{"name":"transcriptional control phenotype during vegetative growth","type":"broad"}],"termid":"FYPO:0001335"}


id: MONDO:0007784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pituitary resistance to thyroid hormone is a rare, genetic thyroid disease, due to reduced pituitary gland responsiveness to thyroid hormone, characterized by mild to moderate hyperthyroidism in association with elevated circulating thyroid hormone levels, normal or elevated thyroid stimulating hormone, and no abnormalities of the pituitary gland on MRI. Patients present with diffuse large goiter, tachycardia, atrial fibrillation, weight loss and/or heat intolerance/perspiration, but no exophthalmos or anterior tibial mixedema.","definition_xrefs":["Orphanet:165994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone resistance syndrome","termid":"MONDO:0001328"},{"relation_name":"is_a","term_name":"hyperthyroidism","termid":"MONDO:0004425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"selective pituitary resistance to thyroid hormone","secondary_identifiers":["MEDGEN:333543","icd11.foundation:482664523","MESH:C564154","OMIM:145650","UMLS:C1840364","DOID:0111374"],"synonyms":[{"name":"PRTH","type":"exact"},{"name":"hyperthyroidism, familial, due to inappropriate thyrotropin secretion","type":"related"},{"name":"pituitary resistance to thyroid hormone","type":"related"},{"name":"thyroid hormone resistance, selective pituitary","type":"related"}],"termid":"MONDO:0007784","xrefs":{"Monarch":{"xref_id":"0007784"}}}


id: GO:0033446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"AGC codon-amino acid adaptor activity","synonyms":[{"name":"serine tRNA","type":"related"}],"termid":"GO:0033446"}


id: GO:0052425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism effects a change in the structure or function of its symbiont organism, mediated by a substance secreted by a type II secretion system in the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of symbiont morphology or physiology via protein secreted by type II secretion system (obsolete GO:0052425)","synonyms":[{"name":"modification by organism of symbiont morphology or physiology via protein secreted by type II secretion system","type":"exact"}],"termid":"GO:0052425"}


id: GO:0102472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: eriodictyol + NADPH + O2 + 2 H+ = 2-hydroxyeriodictyol + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete eriodictyol 2-hydroxylase activity (obsolete GO:0102472)","termid":"GO:0102472"}


