# terms

id: PBO:0065078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase subunit 1","termid":"PBO:0065078"}


id: SO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 28S rRNA is an RNA component of the large subunit of cytosolic ribosomes in metazoan eukaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_28S_gene","termid":"SO:0002239"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_28S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/28S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 28S LSU rRNA","type":"exact"},{"name":"cytosolic 28S rRNA","type":"exact"},{"name":"cytosolic 28S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 28S","type":"exact"}],"termid":"SO:0000653"}


id: GO:0047418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a phthalylamide = phthalate + substituted amine.","definition_xrefs":["MetaCyc:3.5.1.79-RXN","EC:3.5.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phthalyl amidase activity","secondary_identifiers":["RHEA:18297"],"synonyms":[{"name":"o-phthalyl amidase activity","type":"narrow"},{"name":"phthalyl-amide amidohydrolase activity","type":"related"}],"termid":"GO:0047418"}


id: PBO:0012821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-local_range","termid":"PBO:0012821"}


id: PBO:0031464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bismuth","termid":"PBO:0031464"}


id: SO:0000582
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding an rRNA cleavage snoRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_cleavage_snoRNA_primary_transcript","synonyms":[{"name":"rRNA cleavage snoRNA primary transcript","type":"exact"}],"termid":"SO:0000582"}


id: PBO:0049375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 5","termid":"PBO:0049375"}


id: PBO:0026884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_nitrogen_starvation","termid":"PBO:0026884"}


id: MONDO:0011190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the INVS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis 2","secondary_identifiers":["UMLS:C1865872","MESH:C566582","Orphanet:93591","MEDGEN:355574","GARD:18182","DOID:0111113","OMIM:602088"],"synonyms":[{"name":"INVS nephronophthisis (disease)","type":"exact"},{"name":"NPH2","type":"exact"},{"name":"NPHP2","type":"exact"},{"name":"Nph2","type":"related"},{"name":"infantile nephronophthisis 2","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in INVS","type":"exact"},{"name":"nephronophthisis 2","type":"exact"},{"name":"nephronophthisis 2, infantile","type":"exact"},{"name":"nephronophthisis type 2","type":"exact"}],"termid":"MONDO:0011190","xrefs":{"Monarch":{"xref_id":"0011190"}}}


id: PBO:0068429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 4","termid":"PBO:0068429"}


id: PBO:0074300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1 homolog A, structure-specific endonuclease subunit","termid":"PBO:0074300"}


id: PBO:0031746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-flocculation_abolished_(obsolete_FYPO:0000461)","termid":"PBO:0031746"}


id: GO:0031635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by an opioid binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph","GOC:signaling","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"inhibition of adenylate cyclase activity by opioid receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by opioid receptor signalling pathway","type":"related"},{"name":"opioid receptor, adenylate cyclase inhibiting pathway","type":"exact"}],"termid":"GO:0031635"}


id: PBO:0083056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diaminohydroxyphoshoribosylaminopyrimidine deaminase; catalyzes the second step of the riboflavin biosynthesis pathway","termid":"PBO:0083056"}


id: FYECO:0000196
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with urea as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, urea nitrogen source","synonyms":[{"name":"glucose minimal medium, urea nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, urea nitrogen source","type":"related"}],"termid":"FYECO:0000196"}


id: GO:0052395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of defense-related symbiont nitric oxide production (obsolete GO:0052395)","synonyms":[{"name":"activation by organism of defense-related symbiont NO production","type":"exact"},{"name":"activation by organism of defense-related symbiont nitric acid production","type":"exact"},{"name":"induction by organism of defense-related symbiont NO production","type":"exact"},{"name":"induction by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052395"}


id: MONDO:0019249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of autosomal recessive or X-linked inherited lysosomal storage disorders affecting the metabolism of mucopolysaccharides, resulting in the accumulation of mucopolysaccharides in the body. Signs and symptoms include organomegaly, mental retardation, abnormal skeletal development, heart disorders, hearing loss, and central nervous system deficiencies.","definition_xrefs":["NCIT:C61259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"},{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder","termid":"MONDO:0100365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis","secondary_identifiers":["NORD:1461","MESH:D009083","icd11.foundation:1596128696","OMIMPS:607014","Orphanet:79213","DOID:12798","GARD:7065","UMLS:C0026703","SCTID:11380006","MEDGEN:7733","ICD9:277.5","MedDRA:10028093"],"synonyms":[{"name":"MPS","type":"related"},{"name":"Mucopolysaccharidoses","type":"exact"},{"name":"mucopolysaccharidoses","type":"exact"},{"name":"mucopolysaccharidosis","type":"exact"}],"termid":"MONDO:0019249","xrefs":{"Monarch":{"xref_id":"0019249"}}}


id: PBO:0081530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 440","termid":"PBO:0081530"}


id: PBO:0064890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bdelta","termid":"PBO:0064890"}


id: PBO:0044579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 1","termid":"PBO:0044579"}


id: PBO:0060839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament heavy chain","termid":"PBO:0060839"}


id: MONDO:0005962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculosis of the bones or joints.","definition_xrefs":["MESH:D014394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal tuberculosis","secondary_identifiers":["MEDGEN:21727","ICD9:015.9","DOID:1639","ICD9:015","UMLS:C0041324","SCTID:17653001","EFO:0007487"],"synonyms":[{"name":"osteoarticular tuberculosis","type":"exact"}],"termid":"MONDO:0005962","xrefs":{"Monarch":{"xref_id":"0005962"}}}


id: MONDO:0007570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, congenital genetic skin disorder characterized by permanent and asymptomatic erythema of the palmar and, less frequently, the solar surfaces. In most cases, it presents with sharply demarcated redness of the thenar and hypothenar eminences, as well as the palmar aspect of the phalanges, with scattered telangiectasia spots that do not cause any discomfort (pain, itching or burning) to the patient.","definition_xrefs":["Orphanet:231031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythema palmare hereditarium","secondary_identifiers":["MESH:C565041","UMLS:C1851502","MEDGEN:343587","GARD:17157","OMIM:133000","SCTID:763767006"],"synonyms":[{"name":"Red palms disease","type":"exact"},{"name":"erythema palmare hereditarium","type":"exact"},{"name":"lane disease","type":"exact"}],"termid":"MONDO:0007570","xrefs":{"Monarch":{"xref_id":"0007570"}}}


id: PBO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endodeoxyribonuclease Pnu1","termid":"PBO:0002543"}


id: FYPO:0000570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mating projection assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased shmoo formation","synonyms":[{"name":"decreased conjugation tube formation","type":"exact"},{"name":"decreased mating projection assembly","type":"exact"},{"name":"decreased mating projection formation","type":"exact"},{"name":"decreased shmoo assembly","type":"exact"},{"name":"reduced shmoo formation","type":"exact"},{"name":"shmoo formation: decreased","type":"related"}],"termid":"FYPO:0000570"}


id: PBO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GRASP protein family Golgi protein (predicted)","termid":"PBO:0000502"}


id: SO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif comprising two helices separated by a turn.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"has_part","term_name":"peptide_helix","termid":"SO:0001114"},{"relation_name":"has_part","term_name":"polypeptide_turn_motif","termid":"SO:0001128"},{"relation_name":"is_a","term_name":"polypeptide_structural_motif","termid":"SO:0001079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"helix_turn_helix","secondary_identifiers":["BS:00147"],"synonyms":[{"name":"HTH","type":"related"},{"name":"helix turn helix","type":"exact"},{"name":"helix-turn-helix","type":"exact"}],"termid":"SO:0001081"}


id: GO:0051571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K4 methylation (obsolete GO:0051571)","synonyms":[{"name":"activation of histone H3-K4 methylation","type":"narrow"},{"name":"stimulation of histone H3-K4 methylation","type":"narrow"},{"name":"up regulation of histone H3-K4 methylation","type":"exact"},{"name":"up-regulation of histone H3-K4 methylation","type":"exact"},{"name":"upregulation of histone H3-K4 methylation","type":"exact"}],"termid":"GO:0051571"}


id: PBO:0091365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial arginine methyltransferase, human NDUFAF7 ortholog","termid":"PBO:0091365"}


id: _global:realized_by
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"realized_by","termid":"_global:realized_by"}


id: PBO:0042426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 10","termid":"PBO:0042426"}


id: MONDO:0018029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital factor XIII deficiency is an inherited bleeding disorder due to reduced levels and activity of factor XIII (FXIII) and characterized by hemorrhagic diathesis frequently associated with spontaneous abortions and defective wound healing. Factor XIII deficiency is one of the most rare coagulation factor deficiencies.","definition_xrefs":["Orphanet:331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor XIII deficiency","termid":"MONDO:0002241"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital factor XIII deficiency","secondary_identifiers":["NCIT:C131633","UMLS:C0015530","NANDO:2200681","SCTID:50189006","MEDGEN:4639","DOID:2211","ICD9:286.3","GARD:10766"],"synonyms":[{"name":"deficiency, Laki-Lorand factor","type":"exact"},{"name":"factor XIII deficiency","type":"related"},{"name":"factor XIII deficiency disease","type":"exact"},{"name":"fibrin stabilising factor deficiency","type":"related"},{"name":"fibrin stabilizing factor deficiency","type":"related"},{"name":"fibrin-stabilizing factor deficiency","type":"broad"},{"name":"hereditary factor XIII deficiency disease","type":"exact"}],"termid":"MONDO:0018029","xrefs":{"Monarch":{"xref_id":"0018029"}}}


id: GO:0002389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the Peyer's patches.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response in Peyer's patch","termid":"GO:0002388"},{"relation_name":"is_a","term_name":"tolerance induction in gut-associated lymphoid tissue","termid":"GO:0002394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in Peyer's patch","termid":"GO:0002389"}


id: MONDO:0017028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease specific to adulthood associated with a systemic disease (obsolete MONDO:0017028)","secondary_identifiers":["Orphanet:264745"],"synonyms":[{"name":"secondary ILD specific to adulthood associated with a systemic disease","type":"exact"}],"termid":"MONDO:0017028","xrefs":{"Monarch":{"xref_id":"0017028"}}}


id: PBO:0087384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol regulatory element binding protein; induces sterol biosynthetic genes, upon sterol depletion; acts as a sterol sensor, binding ergosterol in sterol rich conditions; relocates from intracellular membranes to perinuclear foci upon sterol depletion; redundant activator of filamentation with ECM22, up-regulating the expression of filamentous growth genes; contains a Zn[2]-Cys[6] binuclear cluster; UPC2 has a paralog, ECM22, that arose from the whole genome duplication","termid":"PBO:0087384"}


id: GO:0016171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface antigen (obsolete GO:0016171)","synonyms":[{"name":"cell surface antigen","type":"exact"}],"termid":"GO:0016171"}


id: PBO:0069407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 667, pseudogene","termid":"PBO:0069407"}


id: MONDO:0009185
data:
  {"annotated_genes":["SJAG_04454"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87360],"is_not":false,"summary":null,"term":"MONDO:0009185"}]},"cv_name":"mondo","definition":"Kohlschütter-TC6nz syndrome (KTS) is a genetically heterogeneous autosomal recessive syndrome characterized by the triad of amelogenesis imperfect, infantile onset epilepsy, intellectual disability with or without regression and dementia.","definition_xrefs":["Orphanet:1946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"amelocerebrohypohidrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537213","MEDGEN:98036","OMIM:226750","SCTID:109478007","UMLS:C0406740","DOID:0111668","GARD:3128"],"synonyms":[{"name":"KOHLSCHUTTER-Tonz syndrome","type":"related"},{"name":"KTZS","type":"related"},{"name":"Kohlschutter Tonz syndrome","type":"related"},{"name":"Kohlschutter syndrome","type":"related"},{"name":"Kohlschutter-Tonz syndrome","type":"exact"},{"name":"amelocerebrohypohidrotic syndrome","type":"exact"},{"name":"epilepsy and Yellow teeth","type":"related"},{"name":"epilepsy dementia amelogenesis imperfecta","type":"related"},{"name":"epilepsy, dementia, and amelogenesis imperfecta","type":"related"},{"name":"epilepsy-dementia-amelogenesis imperfecta syndrome","type":"exact"}],"termid":"MONDO:0009185","terms_by_termid":{"MONDO:0009185":null},"xrefs":{"Monarch":{"xref_id":"0009185"}}}


id: GO:0004783
data:
  {"annotated_genes":["SJAG_05027","SJAG_01693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72070,80205],"is_not":false,"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 NADP+ + 3 H2O = sulfite + 3 NADPH + 3 H+.","definition_xrefs":["RHEA:13801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite reductase activity","termid":"GO:0016002"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sulfite reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SULFITE-REDUCT-RXN","EC:1.8.1.2"],"synonyms":[{"name":"H2S-NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent sulfite reductase activity","type":"related"},{"name":"NADPH-sulfite reductase activity","type":"related"},{"name":"NADPH:sulfite reductase flavoprotein","type":"related"},{"name":"hydrogen-sulfide:NADP+ oxidoreductase activity","type":"related"},{"name":"sulfite (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"sulphite reductase (NADPH) activity","type":"exact"}],"termid":"GO:0004783","terms_by_termid":{"GO:0004783":null}}


id: PBO:0079474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twist family bHLH transcription factor 2","termid":"PBO:0079474"}


id: GO:0036254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amiloride stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to amiloride (obsolete GO:0036254)","termid":"GO:0036254"}


id: RO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_determination_of","termid":"RO:0002349"}


id: PBO:0067185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 244, pseudogene","termid":"PBO:0067185"}


id: MONDO:0007361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"serpinopathy","termid":"MONDO:0027749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"C1 inhibitor deficiency","secondary_identifiers":["DOID:0060002","NANDO:1200365","NANDO:2200795","UMLS:C1852700","Orphanet:459353","MEDGEN:343867","OMIM:120790"],"synonyms":[{"name":"Quincke oedema","type":"related"},{"name":"complement component 4, partial deficiency OF","type":"related"}],"termid":"MONDO:0007361","xrefs":{"Monarch":{"xref_id":"0007361"}}}


id: PBO:0042548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 12","termid":"PBO:0042548"}


id: PBO:0054976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2390","termid":"PBO:0054976"}


id: GO:1902007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of toxin transport.","definition_xrefs":["PMID:22792315","GOC:dph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of toxin transport (obsolete GO:1902007)","termid":"GO:1902007"}


id: PBO:0028783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mRNA-derived_small_RNA_level","termid":"PBO:0028783"}


id: PBO:0086082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt3p, can instead interact with Pmt2p in some conditions; target for new antifungals","termid":"PBO:0086082"}


id: MONDO:1010626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune thrombocytopenia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, non-human animal","termid":"MONDO:1010069"},{"relation_name":"is_a","term_name":"thrombocytopenia, domestic cat","termid":"MONDO:1010660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thrombocytopenia, domestic cat","secondary_identifiers":["OMIA:000095-9685"],"termid":"MONDO:1010626","xrefs":{"Monarch":{"xref_id":"1010626"}}}


id: GO:0034878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisonicotinate + acceptor + H2O = citrazinate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisonicotinate dehydrogenase activity (obsolete GO:0034878)","termid":"GO:0034878"}


id: SO:0000891
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is negatively autoreguated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"negatively_autoregulated","termid":"SO:0000473"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_autoregulated_gene","synonyms":[{"name":"negatively autoregulated gene","type":"exact"}],"termid":"SO:0000891"}


id: PBO:0052657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 25","termid":"PBO:0052657"}


id: PBO:0072566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRBP1 pseudogene 1","termid":"PBO:0072566"}


id: GO:0061108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the seminal vesicle epithelium over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"seminal vesicle development","termid":"GO:0061107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal vesicle epithelium development","termid":"GO:0061108"}


id: GO:1990246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A calcium channel complex in the mitochondrial inner membrane capable of highly-selective calcium channel activity. Its components include the EF-hand-containing proteins mitochondrial calcium uptake 1 (MICU1) and MICU2, the pore-forming subunit mitochondrial calcium uniporter (MCU) and its paralog MCUb, and the MCU regulator EMRE.","definition_xrefs":["PMID:24231807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"uniplex complex","synonyms":[{"name":"mitochondrial uniporter complex","type":"exact"},{"name":"mitochondrial uniporter holocomplex","type":"exact"}],"termid":"GO:1990246"}


id: PBO:0077262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 10 pseudogene 2","termid":"PBO:0077262"}


id: FYPO:0003939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abnormal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003939"}


id: PBO:0044164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin 2, pseudogene","termid":"PBO:0044164"}


id: GO:0009500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dicluster bacterial-type ferredoxin (obsolete GO:0009500)","synonyms":[{"name":"dicluster bacterial-type ferredoxin","type":"exact"}],"termid":"GO:0009500"}


id: PBO:0042112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 184","termid":"PBO:0042112"}


id: PBO:0036315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exomer complex BRCT domain subunit Cfr1","termid":"PBO:0036315"}


id: PBO:0038439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase pseudogene 1","termid":"PBO:0038439"}


id: FYPO:0006158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during S phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during mitotic S phase","synonyms":[{"name":"normal RNA accumulation during mitotic S phase","type":"related"},{"name":"normal RNA level during S phase during vegetative growth","type":"exact"},{"name":"normal RNA level during S phase of mitotic cell cycle","type":"exact"},{"name":"normal mRNA level during mitotic S phase","type":"narrow"},{"name":"normal transcript level during mitotic S phase","type":"exact"}],"termid":"FYPO:0006158"}


id: GO:0048638
data:
  {"annotated_genes":["SJAG_00244","SJAG_02169","SJAG_03581","SJAG_02392","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97796,91813,96527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[92671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[117046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of developmental growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048638","terms_by_termid":{"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: GO:0050233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + O2 = 2-dehydro-D-glucose + H2O2.","definition_xrefs":["EC:1.1.3.10","RHEA:10552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pyranose oxidase activity","secondary_identifiers":["MetaCyc:PYRANOSE-OXIDASE-RXN","KEGG_REACTION:R00302"],"synonyms":[{"name":"glucose 2-oxidase activity","type":"related"},{"name":"pyranose-2-oxidase activity","type":"related"},{"name":"pyranose:oxygen 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050233"}


id: PBO:0074916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 87","termid":"PBO:0074916"}


id: PBO:0049459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2","termid":"PBO:0049459"}


id: MONDO:0009011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constriction rings syndrome (obsolete MONDO:0009011)","termid":"MONDO:0009011","xrefs":{"Monarch":{"xref_id":"0009011"}}}


id: PBO:0045125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dematin actin binding protein","termid":"PBO:0045125"}


id: PATO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The period before death of the organism.","definition_xrefs":["merriam-webster:merriam-webster"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002085 pre-mortem (obsolete PATO:0002085)","termid":"PATO:0002085"}


id: PBO:0046260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embigin pseudogene 1","termid":"PBO:0046260"}


id: PBO:0067989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 291","termid":"PBO:0067989"}


id: PATO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000042 relative distance (obsolete PATO:0000042)","termid":"PATO:0000042"}


id: PBO:0108686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex RabGEF subunit Vam6","termid":"PBO:0108686"}


id: MONDO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder adenocarcinoma characterized by the presence of malignant glandular epithelial cells and clear cells forming a diffuse pattern.","definition_xrefs":["NCIT:C39849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder clear cell adenocarcinoma","termid":"MONDO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder diffuse clear cell adenocarcinoma","secondary_identifiers":["DOID:6210","MEDGEN:267058","UMLS:C1511187"],"synonyms":[{"name":"bladder diffuse clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0003810","xrefs":{"Monarch":{"xref_id":"0003810"}}}


id: GO:0050600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11,12-saturated fatty acyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (11E)-delta11-fatty acyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA 11-(E)-desaturase activity","secondary_identifiers":["MetaCyc:1.14.99.31-RXN","EC:1.14.19.24"],"synonyms":[{"name":"acyl-CoA delta11-desaturase activity","type":"broad"},{"name":"myristoyl-CoA 11-(E) desaturase activity","type":"narrow"}],"termid":"GO:0050600"}


id: PBO:0065580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 2","termid":"PBO:0065580"}


id: PR:O14105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC31G5.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-phosphate 3-epimerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.05c","synonyms":[{"name":"PPE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC31G5.05c","type":"exact"},{"name":"pentose-5-phosphate 3-epimerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14105"}


id: MOD:00742
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a copper atom or a cluster containing copper for hydrogen atoms, or that coordinates a copper ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper containing modified residue","synonyms":[{"name":"CuRes","type":"exact"}],"termid":"MOD:00742"}


id: GO:0031460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glycine betaine, N-trimethylglycine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glycine betaine transport","synonyms":[{"name":"N-trimethylglycine transport","type":"exact"}],"termid":"GO:0031460"}


id: PBO:0082262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase); catalyzes the third step in para-aminobenzoic acid biosynthesis; involved in folic acid biosynthesis","termid":"PBO:0082262"}


id: PBO:0034185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acquires_nutrients_from","termid":"PBO:0034185"}


id: PBO:0003998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, calcium binding subfamily (predicted)","termid":"PBO:0003998"}


id: PATO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the anterior-posterior axis.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positional polarity","termid":"PATO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior-posterior polarity","synonyms":[{"name":"rostral-caudal polarity ","type":"exact"},{"name":"superior-caudal polarity (human torso)","type":"exact"}],"termid":"PATO:0002024"}


id: PBO:0084551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric region; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme","termid":"PBO:0084551"}


id: GO:0039004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric proximal tubule morphogenesis","termid":"GO:0039011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric proximal tubule identity","termid":"GO:0039004"}


id: PR:Q9HGL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A brix domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02384","PANTHER:PTHR13634:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein brx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.06","secondary_identifiers":["UniProtKB:Q9HGL6"],"synonyms":[{"name":"Spom972h-BRIX1","type":"exact"}],"termid":"PR:Q9HGL6"}


id: PBO:0067479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 612, pseudogene","termid":"PBO:0067479"}


id: PBO:0040325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1","termid":"PBO:0040325"}


id: GO:1990457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle involved in the degradation of peroxisome by macropexophagy.","definition_xrefs":["PMID:22536249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pexophagosome","termid":"GO:1990457"}


id: PBO:0061859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 3","termid":"PBO:0061859"}


id: PBO:0075328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 1","termid":"PBO:0075328"}


id: MONDO:1012394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"growth-hormone deficiency dwarfism,, non-human animal","termid":"MONDO:1011959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth-hormone deficiency dwarfism, zebu cattle","secondary_identifiers":["OMIA:001473-9915"],"termid":"MONDO:1012394","xrefs":{"Monarch":{"xref_id":"1012394"}}}


id: PBO:0091875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally silent transcript from pho1 locus","termid":"PBO:0091875"}


id: MONDO:0008897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tumoral calcinosis, hyperphosphatemic, familial, 1 (obsolete MONDO:0008897)","termid":"MONDO:0008897","xrefs":{"Monarch":{"xref_id":"0008897"}}}


id: PBO:0078674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 7-1","termid":"PBO:0078674"}


id: GO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vasopressin-like receptor activity (obsolete GO:0001603)","synonyms":[{"name":"vasopressin-like receptor activity","type":"exact"}],"termid":"GO:0001603"}


id: MONDO:0020650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"},{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell tumor of the vulva","secondary_identifiers":["NCIT:C128294","UMLS:C4288008","ONCOTREE:VGCT","MEDGEN:925540"],"termid":"MONDO:0020650","xrefs":{"Monarch":{"xref_id":"0020650"}}}


id: PBO:0059111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modulator of smoothened","termid":"PBO:0059111"}


id: PBO:0110470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 263","termid":"PBO:0110470"}


id: GO:0061121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-2. DIF-2 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061121"}


id: GO:0097220
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sieve plate that contains a single specialized sieve area.","definition_xrefs":["POC:curators","ISBN:0471738433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sieve plate","termid":"GO:0097218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"simple sieve plate","termid":"GO:0097220"}


id: GO:2000754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sphingomyelin catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"sphingomyelin catabolic process","termid":"GO:0006685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of sphingomyelin catabolic process","synonyms":[{"name":"regulation of sphingomyelin breakdown","type":"exact"},{"name":"regulation of sphingomyelin catabolism","type":"exact"},{"name":"regulation of sphingomyelin degradation","type":"exact"}],"termid":"GO:2000754"}


id: GO:0044296
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization found in some types of dendrites which consists of numerous small terminal branches, giving the dendrite a tufted appearance.","definition_xrefs":["NIF_Subcellular:sao1340260079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic tuft","synonyms":[{"name":"dendrite tuft","type":"exact"}],"termid":"GO:0044296"}


id: GO:0015644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to a lipoprotein toxin, which is usually derived from a microorganism, thereby neutralizing it.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein antitoxin (obsolete GO:0015644)","synonyms":[{"name":"lipoprotein antitoxin","type":"exact"}],"termid":"GO:0015644"}


id: GO:0042446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormone biosynthetic process","synonyms":[{"name":"hormone anabolism","type":"exact"},{"name":"hormone biosynthesis","type":"exact"},{"name":"hormone formation","type":"exact"},{"name":"hormone synthesis","type":"exact"}],"termid":"GO:0042446"}


id: PR:O74306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L5-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.09c","synonyms":[{"name":"Spom972h-rpl502","type":"exact"}],"termid":"PR:O74306"}


id: MONDO:0033926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hypothalamic or pituitary disease (obsolete MONDO:0015889)","termid":"MONDO:0015889"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"anorexia nervosa","termid":"MONDO:0005351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prepubertal anorexia nervosa","secondary_identifiers":["Orphanet:525738","MEDGEN:1799990","GARD:22191","UMLS:C5568567"],"termid":"MONDO:0033926","xrefs":{"Monarch":{"xref_id":"0033926"}}}


id: MONDO:0007926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Waldenstrom macroglobulinemia (obsolete MONDO:0007926)","termid":"MONDO:0007926","xrefs":{"Monarch":{"xref_id":"0007926"}}}


id: PBO:0065806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB2B, member RAS oncogene family","termid":"PBO:0065806"}


id: GO:0014897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle hypertrophy","termid":"GO:0014897"}


id: GO:0021819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","PMID:12626695","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"layer formation in cerebral cortex","synonyms":[{"name":"cerebral cortex lamination","type":"related"}],"termid":"GO:0021819"}


id: PBO:0052634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 2","termid":"PBO:0052634"}


id: PBO:0015268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucan synthase Ags1","termid":"PBO:0015268"}


id: PBO:0076154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURP and G-patch domain containing 2","termid":"PBO:0076154"}


id: GO:0005759
data:
  {"annotated_genes":["SJAG_04959","SJAG_00799","SJAG_01767","SJAG_04244","SJAG_04019","SJAG_02071","SJAG_00168","SJAG_03222","SJAG_00714","SJAG_03786","SJAG_04840","SJAG_04560","SJAG_03649","SJAG_01174","SJAG_02836","SJAG_00635","SJAG_00502","SJAG_01882","SJAG_04688","SJAG_00628","SJAG_01734","SJAG_00659","SJAG_01518","SJAG_06110","SJAG_00103","SJAG_00255","SJAG_01413","SJAG_02306","SJAG_04367","SJAG_04493","SJAG_04152","SJAG_04351","SJAG_03459","SJAG_03964","SJAG_01574","SJAG_00695","SJAG_00097","SJAG_03297","SJAG_03861","SJAG_04893","SJAG_01820","SJAG_02201","SJAG_03192","SJAG_06635","SJAG_00396","SJAG_07005","SJAG_02991","SJAG_03804","SJAG_04862","SJAG_01903","SJAG_02548","SJAG_05270","SJAG_04856","SJAG_05218","SJAG_01520","SJAG_06586","SJAG_04094","SJAG_02979","SJAG_03588","SJAG_03674","SJAG_04054","SJAG_04207","SJAG_01019","SJAG_00833","SJAG_06135","SJAG_04533","SJAG_MIT07","SJAG_04823","SJAG_04490","SJAG_02235","SJAG_02615","SJAG_02236","SJAG_02901","SJAG_02856","SJAG_02077","SJAG_03862","SJAG_03163","SJAG_00153","SJAG_02777","SJAG_03104","SJAG_01147","SJAG_02359","SJAG_03700","SJAG_04164","SJAG_MIT06","SJAG_04378","SJAG_03985","SJAG_01503","SJAG_03065","SJAG_04409","SJAG_05244","SJAG_03393","SJAG_03053","SJAG_00611","SJAG_01807","SJAG_01727","SJAG_00513","SJAG_03303","SJAG_02428","SJAG_01473","SJAG_00830","SJAG_02721","SJAG_01591","SJAG_03585","SJAG_04305","SJAG_02353","SJAG_03232","SJAG_00315","SJAG_16456","SJAG_03426","SJAG_03906","SJAG_01352","SJAG_05560","SJAG_00889","SJAG_03284","SJAG_03957","SJAG_01417","SJAG_02977","SJAG_02324","SJAG_04494","SJAG_01004","SJAG_03068","SJAG_01753","SJAG_03636","SJAG_02433","SJAG_01922","SJAG_04149","SJAG_04397","SJAG_03176","SJAG_05573","SJAG_04929","SJAG_04889","SJAG_00497","SJAG_04641","SJAG_01517","SJAG_01577","SJAG_00844","SJAG_04635","SJAG_03574","SJAG_03014","SJAG_00582","SJAG_04216","SJAG_00105","SJAG_02643","SJAG_01829","SJAG_00077","SJAG_00564","SJAG_04014","SJAG_00148","SJAG_02067","SJAG_04064","SJAG_03289","SJAG_02825","SJAG_00703","SJAG_04473","SJAG_01478","SJAG_00060","SJAG_04899","SJAG_04432","SJAG_01238","SJAG_00231","SJAG_06253","SJAG_04689","SJAG_01463","SJAG_01630","SJAG_00782","SJAG_01797","SJAG_04173","SJAG_00286","SJAG_00532","SJAG_04183","SJAG_03532","SJAG_04098","SJAG_02217","SJAG_04738","SJAG_03461","SJAG_01597","SJAG_03071","SJAG_03099","SJAG_04145","SJAG_01468","SJAG_01052","SJAG_MIT05","SJAG_00358","SJAG_07009","SJAG_01615","SJAG_04336","SJAG_05320","SJAG_02526","SJAG_04281","SJAG_03641","SJAG_03180","SJAG_03290","SJAG_02762","SJAG_04918","SJAG_00944","SJAG_00186","SJAG_05008","SJAG_00420","SJAG_01719","SJAG_03155","SJAG_03040","SJAG_02841","SJAG_00373","SJAG_00086","SJAG_01684","SJAG_03961","SJAG_03322","SJAG_00653","SJAG_03724","SJAG_01446","SJAG_04377","SJAG_03584","SJAG_00634","SJAG_02397","SJAG_01262","SJAG_02658","SJAG_04753","SJAG_00107","SJAG_01368","SJAG_00894","SJAG_00936","SJAG_01895","SJAG_00984","SJAG_00636","SJAG_03563","SJAG_04788","SJAG_01303","SJAG_01592","SJAG_02452","SJAG_03402","SJAG_04285","SJAG_00860","SJAG_01045","SJAG_03550","SJAG_03946","SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57484,58489,58578,58919,59838,60143,64177,67031,68640,68752,69080,70436,71916,72542,73168,73318,74264,76300,76311,76460,78757,79976,79999,80005,80060,80295,80767,81033,89352,89665,90337,90614,90924,90990,92627,92942,93520,94250,95135,95666,96210,96405,96420,96464,96604,96613,97088,97194,97450,97520,97734,97886,98091,98312,98360,98408,98604,98621,98793,98950,99258,99270,99570,99616,100029,100114,100122,100206,100650,100904,101198,102640,102822,103241,103417,103490,103847,103867,103884,104217,104579,104628,104836,105062,105583,105727,105884,106227,106663,106724,107548,107607,108083,108171,108849,109085,109166,109186,109463,110116,110293,110349,110448,110600,111441,112060,112421,113223,113281,113757,113800,114667,114846,114850,114860,115009,115020,115244,115870,115878,115947,116426,117286,117676,117858,118041,118553,119162,119398,119849,120011,120051,120063,120308,120417],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[63965],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005760"},{"annotations":[104847,104828,64787,121063,90538,121064,101250,107901,121055],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000262"},{"annotations":[78505,111825,68519,78531,99929,114718,116587,73096,74357,72656,80000,81603,81286,114218,119920,108726,76709,74034,110153,118151,74952,71519,81126,79181,80310,105635,113093,82311,118260,73706,81736,110203,80028,99908,115444,79771,74691,77276,98544,107669,77502,110054,112765,116705],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005762"},{"annotations":[103252,112109,114061,106102,77626,90270,97693],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042645"},{"annotations":[115182,107542],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0017087"},{"annotations":[75118,96137,80228,110562,98576,112370,110058,71049,91904,110318,78444,104264,117591,118011,99932,108000,112653,120089,91878,99933,76052,77615,112117,74486,76004,97875,114354,108365,105957,96438,105035,94029,74254],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005763"},{"annotations":[72980,75907,101191,105236,113790,78604],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001405"}]},"cv_name":"cellular_component","definition":"The 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disorders","type":"exact"}],"termid":"MONDO:0005151","terms_by_termid":{"MONDO:0005148":null,"MONDO:0007256":null,"MONDO:0007273":null,"MONDO:0007369":null,"MONDO:0007453":null,"MONDO:0007681":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007785":null,"MONDO:0008170":null,"MONDO:0008192":null,"MONDO:0008265":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0008566":null,"MONDO:0008840":null,"MONDO:0008980":null,"MONDO:0009025":null,"MONDO:0009050":null,"MONDO:0009258":null,"MONDO:0009416":null,"MONDO:0009514":null,"MONDO:0009916":null,"MONDO:0010134":null,"MONDO:0010350":null,"MONDO:0010420":null,"MONDO:0010814":null,"MONDO:0010926":null,"MONDO:0010939":null,"MONDO:0010961":null,"MONDO:0011121":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011236":null,"MONDO:0011301":null,"MONDO:0011365":null,"MONDO:0011503":null,"MONDO:0011544":null,"MONDO:0011559":null,"MONDO:0011717":null,"MONDO:0011740":null,"MONDO:0012004":null,"MONDO:0012794":null,"MONDO:0012992":null,"MONDO:0013000":null,"MONDO:0013111":null,"MONDO:0013310":null,"MONDO:0013602":null,"MONDO:0013689":null,"MONDO:0013722":null,"MONDO:0013771":null,"MONDO:0013972":null,"MONDO:0013995":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014359":null,"MONDO:0014455":null,"MONDO:0014488":null,"MONDO:0014497":null,"MONDO:0014659":null,"MONDO:0014674":null,"MONDO:0014686":null,"MONDO:0014843":null,"MONDO:0014860":null,"MONDO:0015278":null,"MONDO:0024568":null,"MONDO:0026731":null,"MONDO:0026763":null,"MONDO:0030736":null,"MONDO:0030810":null,"MONDO:0030870":null,"MONDO:0030886":null,"MONDO:0031040":null,"MONDO:0032771":null,"MONDO:0032787":null,"MONDO:0032844":null,"MONDO:0054743":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0100165":null,"MONDO:0700299":null,"MONDO:0859362":null,"MONDO:0957577":null,"MONDO:0958035":null,"MONDO:0976232":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0005151"}}}


id: MONDO:0035313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of inflammatory pseudotumor of the liver characterized by a benign, well-circumscribed tumor with diffuse lymphoplasmacytic infiltration with histological features of IgG4-related disease (numerous IgG4-positive plasma cells, prominent eosinophils, stromal fibrosis, fibroblastic proliferations and, frequently, obliterative phlebitis), and that is likely located around the hepatic hilum. Most often it is discovered as an incidental finding.","definition_xrefs":["Orphanet:555437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"lymphoplasmacytic inflammatory pseudotumor of the liver","secondary_identifiers":["GARD:22240","UMLS:C5680170","ICD10CM:K75.8","MEDGEN:1843135"],"synonyms":[{"name":"IgG4-related inflammatory pseudotumor of the liver","type":"exact"}],"termid":"MONDO:0035313","xrefs":{"Monarch":{"xref_id":"0035313"}}}


id: PR:O74865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dph7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.15","synonyms":[{"name":"Spom972h-dph7","type":"exact"},{"name":"WD repeat-containing protein rrt2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"diphthamide biosynthesis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74865"}


id: PBO:0039620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A3","termid":"PBO:0039620"}


id: MONDO:1012129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin A deficiency, non-human animal","termid":"MONDO:1011726"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin A deficiency, gray wolf","secondary_identifiers":["OMIA:000552-9612"],"termid":"MONDO:1012129","xrefs":{"Monarch":{"xref_id":"1012129"}}}


id: PBO:0049214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate receptor interacting protein 1","termid":"PBO:0049214"}


id: GO:0006804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxidase reaction (obsolete GO:0006804)","synonyms":[{"name":"peroxidase reaction","type":"exact"}],"termid":"GO:0006804"}


id: GO:1904905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","PMID:19460962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"},{"relation_name":"negatively_regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of endothelial cell-matrix adhesion via fibronectin","synonyms":[{"name":"down regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"down-regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"downregulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"inhibition of endothelial cell-matrix adhesion via fibronectin","type":"narrow"}],"termid":"GO:1904905"}


id: MONDO:0019320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"linear verrucous nevus syndrome","termid":"MONDO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acanthokeratolytic verrucous nevus","secondary_identifiers":["Orphanet:79468","UMLS:C5681486","GARD:5485","MEDGEN:1826155"],"synonyms":[{"name":"verrucous nevus acanthokeratolytic","type":"related"}],"termid":"MONDO:0019320","xrefs":{"Monarch":{"xref_id":"0019320"}}}


id: FYPO:0002471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to IR","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0002471"}


id: PBO:0051092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 3","termid":"PBO:0051092"}


id: GO:0018111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine = D-methionine.","definition_xrefs":["RHEA:12492","EC:5.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methionine racemase activity","secondary_identifiers":["MetaCyc:METHIONINE-RACEMASE-RXN","KEGG_REACTION:R00655"],"termid":"GO:0018111"}


id: MONDO:0016976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thymic neuroendocrine carcinoma","termid":"MONDO:0020516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"well-differentiated thymic neuroendocrine carcinoma","secondary_identifiers":["icd11.foundation:2004515128","Orphanet:263331","GARD:20895","MEDGEN:931134","SCTID:717922007","UMLS:C4305465"],"termid":"MONDO:0016976","xrefs":{"Monarch":{"xref_id":"0016976"}}}


id: GO:0050945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iridophore differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iridophore differentiation","termid":"GO:0050937"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"iridophore differentiation","termid":"GO:0050935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of iridophore differentiation","synonyms":[{"name":"activation of iridophore differentiation","type":"narrow"},{"name":"stimulation of iridophore differentiation","type":"narrow"},{"name":"up regulation of iridophore differentiation","type":"exact"},{"name":"up-regulation of iridophore differentiation","type":"exact"},{"name":"upregulation of iridophore differentiation","type":"exact"}],"termid":"GO:0050945"}


id: PBO:0063872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C pseudogene 1","termid":"PBO:0063872"}


id: GO:0035325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like protein, a pattern recognition receptor that binds pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:19076341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"Toll-like receptor binding","synonyms":[{"name":"TLR binding","type":"exact"}],"termid":"GO:0035325"}


id: GO:0004412
data:
  {"annotated_genes":["SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73035],"is_not":false,"summary":null,"term":"GO:0004412"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + NADP+ = L-aspartate-4-semialdehyde + NADPH + H+.","definition_xrefs":["EC:1.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"homoserine dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:15761","MetaCyc:HOMOSERDEHYDROG-RXN"],"termid":"GO:0004412","terms_by_termid":{"GO:0004412":null}}


id: MONDO:0800432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity, susceptibility to","secondary_identifiers":["MEDGEN:356231","UMLS:C1866432"],"termid":"MONDO:0800432","xrefs":{"Monarch":{"xref_id":"0800432"}}}


id: PBO:0063558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pellino E3 ubiquitin protein ligase family member 2","termid":"PBO:0063558"}


id: FYPO:0008213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing lactate as the carbon source.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0005447","FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased vegetative cell population growth on lactate carbon source","termid":"FYPO:0008213"}


id: GO:1901178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving spheroidene.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00683","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"spheroidene metabolic process","synonyms":[{"name":"spheroidene metabolism","type":"exact"}],"termid":"GO:1901178"}


id: PBO:0062167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 8 pseudogene","termid":"PBO:0062167"}


id: GO:0120136
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120038],"is_not":false,"summary":null,"term":"GO:0120136"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dUMP = ADP + dUDP.","definition_xrefs":["PMID:3010881","RHEA:30655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside phosphate kinase activity, ATP as phosphate donor","termid":"GO:0047507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"dUMP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP:dUMP phosphotransferase activity","type":"exact"},{"name":"dUMP-kinase activity","type":"exact"},{"name":"deoxyuridine monophosphate kinase activity","type":"exact"}],"termid":"GO:0120136","terms_by_termid":{"GO:0120136":null}}


id: PBO:0082737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition","termid":"PBO:0082737"}


id: PBO:0076343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 10","termid":"PBO:0076343"}


id: MONDO:0016436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired dermis elastic tissue disorder with increased elastic tissue (obsolete MONDO:0016436)","secondary_identifiers":["Orphanet:228224"],"termid":"MONDO:0016436","xrefs":{"Monarch":{"xref_id":"0016436"}}}


id: GO:0043907
data:
  {"annotated_genes":["SJAG_01259"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107890],"is_not":false,"summary":null,"term":"GO:0043907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteinyl-tRNA(Pro) + H2O = tRNA(Pro) + L-cysteine + H+.","definition_xrefs":["PMID:15886196","RHEA:25351","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA deacylase activity","termid":"GO:0002161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"Cys-tRNA(Pro) deacylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.n2"],"synonyms":[{"name":"Cys-tRNA(Pro) deacetylase activity","type":"exact"},{"name":"Cys-tRNAPro hydrolase activity","type":"exact"}],"termid":"GO:0043907","terms_by_termid":{"GO:0043907":null}}


id: PATO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color saturation which is of low purity.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color saturation","termid":"PATO:0000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low saturation","synonyms":[{"name":"dull","type":"related"},{"name":"pale","type":"exact"}],"termid":"PATO:0000328"}


id: PBO:0061535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1","termid":"PBO:0061535"}


id: GO:0016738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which reduced flavodoxin acts as a hydrogen or electron donor and reduces dinitrogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on reduced flavodoxin as donor","termid":"GO:0016737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on reduced flavodoxin as donor, dinitrogen as acceptor","secondary_identifiers":["EC:1.19.6.-"],"termid":"GO:0016738"}


id: PBO:0080693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 1","termid":"PBO:0080693"}


id: PBO:0067424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 543, pseudogene","termid":"PBO:0067424"}


id: MONDO:0010582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diabetes insipidus, neurohypophyseal type, X-linked inheritance (obsolete MONDO:0010582)","secondary_identifiers":["OMIM:304900","DOID:0081059"],"synonyms":[{"name":"diabetes insipidus, neurohypophyseal type","type":"exact"}],"termid":"MONDO:0010582","xrefs":{"Monarch":{"xref_id":"0010582"}}}


id: GO:0061995
data:
  {"annotated_genes":["SJAG_00475","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108923,114523],"is_not":false,"summary":null,"term":"GO:0061995"}]},"cv_name":"molecular_function","definition":"An activity that displaces proteins or protein complexes from DNA, sometimes in a 'wire stripping' fashion, driven by ATP hydrolysis.","definition_xrefs":["PMID:18593879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent protein-DNA unloader activity","termid":"GO:0140083"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00475":null,"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent protein-DNA complex displacement activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061994","Reactome:R-HSA-9822115"],"synonyms":[{"name":"ATP-dependent protein-nucleic acid complex displacement activity","type":"narrow"}],"termid":"GO:0061995","terms_by_termid":{"GO:0061995":null}}


id: PBO:0071169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 8","termid":"PBO:0071169"}


id: GO:0002811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antifungal peptide production","termid":"GO:0002789"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002806"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide biosynthetic process","termid":"GO:0002810"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antifungal peptide biosynthetic process","synonyms":[{"name":"down regulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"down-regulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"downregulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"inhibition of antifungal peptide biosynthetic process","type":"narrow"}],"termid":"GO:0002811"}


id: PBO:0067879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 181","termid":"PBO:0067879"}


id: MONDO:0017277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 12 disorder","termid":"MONDO:0700019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 12","secondary_identifiers":["MEDGEN:1826080","GARD:21115","UMLS:C5680422","Orphanet:282124"],"synonyms":[{"name":"partial deletion of chromosome type 12","type":"exact"},{"name":"partial monosomy of chromosome 12","type":"exact"}],"termid":"MONDO:0017277","xrefs":{"Monarch":{"xref_id":"0017277"}}}


id: GO:0034573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: didemethylisoproturon + H2O = carbamic acid + 4-isopropylaniline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete didemethylisoproturon amidohydrolase activity (obsolete GO:0034573)","termid":"GO:0034573"}


id: GO:0033080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an immature T cell population by cell division in the thymus.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature T cell proliferation","termid":"GO:0033079"},{"relation_name":"part_of","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature T cell proliferation in thymus","synonyms":[{"name":"thymic T cell proliferation","type":"exact"},{"name":"thymocyte cell proliferation","type":"exact"},{"name":"thymocyte proliferation","type":"exact"}],"termid":"GO:0033080"}


id: PBO:0074098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 1","termid":"PBO:0074098"}


id: PBO:0071387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 10","termid":"PBO:0071387"}


id: PBO:0045461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 1","termid":"PBO:0045461"}


id: FYPO:0003185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to microtubule cytoskeleton during mitotic interphase","synonyms":[{"name":"normal protein localisation to microtubule cytoskeleton during mitotic interphase","type":"exact"},{"name":"normal protein localization to microtubule cytoskeleton during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0003185"}


id: PBO:0056588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDC1 antisense RNA 1","termid":"PBO:0056588"}


id: PBO:0050221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 38","termid":"PBO:0050221"}


id: MONDO:0020690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adult infiltrating astrocytic neoplasm","termid":"MONDO:0004320"},{"relation_name":"is_a","term_name":"glioblastoma","termid":"MONDO:0018177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult glioblastoma","secondary_identifiers":["NCIT:C9094","UMLS:C0278878","NANDO:2200087","MEDGEN:124527"],"synonyms":[{"name":"adult glioblastoma","type":"exact"},{"name":"adult glioblastoma multiforme","type":"exact"},{"name":"glioblastoma","type":"broad"},{"name":"grade IV adult astrocytic neoplasm","type":"exact"},{"name":"grade IV adult astrocytic tumor","type":"exact"},{"name":"grade IV adult astrocytic tumour","type":"exact"}],"termid":"MONDO:0020690","xrefs":{"Monarch":{"xref_id":"0020690"}}}


id: PBO:0089999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase","termid":"PBO:0089999"}


id: PBO:0080333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 97 pseudogene","termid":"PBO:0080333"}


id: PBO:0038296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"community_curated","termid":"PBO:0038296"}


id: RO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a piece of evidence a and some entity b, where b is  an information content entity, material entity or process, and \\nthe a supports either the existence of b, or the truth value of b.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_evidence_for","termid":"RO:0002472"}


id: FYPO:0004986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription does not occur during the meiotic cell cycle. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abolished transcription during meiotic cell cycle","synonyms":[{"name":"abolished meiotic cell cycle gene expression","type":"related"},{"name":"transcription abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004986"}


id: PBO:0061989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 11","termid":"PBO:0061989"}


id: MONDO:0012397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, coloboma, and anterior segment dysgenesis","secondary_identifiers":["MESH:C566484","MEDGEN:355321","UMLS:C1864901","OMIM:610023"],"synonyms":[{"name":"brachydactyly, coloboma, and anterior segment dysgenesis","type":"exact"}],"termid":"MONDO:0012397","xrefs":{"Monarch":{"xref_id":"0012397"}}}


id: MONDO:0005853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm composed of a carcinomatous epithelial component and a sarcomatous mesenchymal component. Representative examples include malignant mixed mesodermal (Mullerian) tumor of the female reproductive system and carcinosarcoma of the salivary gland and the lung.","definition_xrefs":["NCIT:C3729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mixed neoplasm","secondary_identifiers":["ICDO:8940/3","MEDGEN:64618","UMLS:C0206625","MESH:D018198","DOID:154","EFO:1000356"],"synonyms":[{"name":"malignant mixed cancer","type":"exact"},{"name":"malignant mixed neoplasm","type":"exact"},{"name":"malignant mixed tumor","type":"exact"},{"name":"malignant mixed tumors","type":"related"},{"name":"malignant mixed tumour","type":"exact"},{"name":"malignant mixed tumours","type":"related"},{"name":"mixed cell type cancer","type":"broad"},{"name":"mixed neoplasm","type":"broad"},{"name":"mixed neoplasm, malignant","type":"exact"},{"name":"mixed tumor","type":"broad"},{"name":"mixed tumor, malignant","type":"exact"},{"name":"mixed tumor, malignant (morphologic abnormality)","type":"exact"},{"name":"mixed tumor, malignant, NOS (morphologic abnormality)","type":"exact"},{"name":"mixed tumors, malignant","type":"related"},{"name":"mixed tumour","type":"broad"},{"name":"tumor, malignant mixed","type":"related"},{"name":"tumor, mixed, malignant","type":"exact"},{"name":"tumors, malignant mixed","type":"related"}],"termid":"MONDO:0005853","xrefs":{"Monarch":{"xref_id":"0005853"}}}


id: MONDO:0024622
data:
  {"annotated_genes":["SJAG_01970","SJAG_04067","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87769,89247,89248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"An adenocarcinoma arising from the follicular cells of the thyroid gland. According to the degree of differentiation, it is classified either as differentiated carcinoma (extensive evidence of follicular cell differentiation), or poorly differentiated carcinoma (limited evidence of follicular cell differentiation).","definition_xrefs":["NCIT:C27380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland adenocarcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080524","MEDGEN:309935","UMLS:C1704228"],"synonyms":[{"name":"thyroid adenocarcinoma","type":"exact"},{"name":"thyroid gland adenocarcinoma","type":"exact"}],"termid":"MONDO:0024622","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0024622"}}}


id: PBO:0087513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heteropentameric Replication factor C (RF-C); RF-C is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon","termid":"PBO:0087513"}


id: PBO:0055718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leishmanolysin like peptidase","termid":"PBO:0055718"}


id: PBO:0091582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosomal protein Rsm2202, fusion protein","termid":"PBO:0091582"}


id: PBO:0027627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_plasmid_catenanes","termid":"PBO:0027627"}


id: PBO:0120972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB domain containing 5","termid":"PBO:0120972"}


id: GO:0140023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amine group from an adenosine to produce inosine within a tRNA molecule.","definition_xrefs":["PMID:27974624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA adenosine deamination to inosine","synonyms":[{"name":"A-to-I tRNA editing","type":"exact"}],"termid":"GO:0140023"}


id: PATO:0002482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Shape quality inhering in a bearer by virtue of the bearer exhibiting a narrow and elongate opening.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slit-like","termid":"PATO:0002482"}


id: MONDO:0021062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary acrokeratotic poikiloderma of Kindler-Weary (obsolete MONDO:0021062)","secondary_identifiers":["Orphanet:306539"],"termid":"MONDO:0021062","xrefs":{"Monarch":{"xref_id":"0021062"}}}


id: FYPO:0006618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to bleomycin.","definition_xrefs":["PMID:22064477","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to bleomycin","synonyms":[{"name":"increased number of Rad22 foci during cellular response to bleomycin","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to DNA damage","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0006618"}


id: GO:0042861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of achromobactin, a citrate siderophore.","definition_xrefs":["PMID:10928541","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"achromobactin biosynthetic process","secondary_identifiers":["GO:0031182","GO:0031181"],"synonyms":[{"name":"achromobactin anabolism","type":"exact"},{"name":"achromobactin biosynthesis","type":"exact"},{"name":"achromobactin formation","type":"exact"},{"name":"achromobactin synthesis","type":"exact"}],"termid":"GO:0042861"}


id: GO:0047800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cysteamine + O2 = H+ + hypotaurine.","definition_xrefs":["EC:1.13.11.19","RHEA:14409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cysteamine dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02467","Reactome:R-HSA-6814153","MetaCyc:CYSTEAMINE-DIOXYGENASE-RXN"],"synonyms":[{"name":"2-aminoethanethiol:oxygen oxidoreductase activity","type":"related"},{"name":"cysteamine oxygenase activity","type":"related"},{"name":"cysteamine:oxygen oxidoreductase activity","type":"related"},{"name":"persulfurase activity","type":"related"}],"termid":"GO:0047800"}


id: GO:1905144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetylcholine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21238497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acetylcholine","termid":"GO:1905144"}


id: PBO:0068495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 79, pseudogene","termid":"PBO:0068495"}


id: GO:2000247
data:
  {"annotated_genes":["SJAG_04461","SJAG_00845","SJAG_00661","SJAG_01799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95690,102138,107321],"is_not":false,"summary":null,"term":"GO:2000247"},{"annotations":[105653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"is_a","term_name":"positive regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000771"},{"relation_name":"positively_regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"positive regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000247","terms_by_termid":{"GO:0061361":null,"GO:2000247":null}}


id: GO:0061979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of femoral head articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20097540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hip joint articular cartilage development","termid":"GO:0061977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"femoral head articular cartilage development","termid":"GO:0061979"}


id: GO:1904136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:24892953","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"}


id: PATO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A threshold which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"threshold","termid":"PATO:0000152"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased threshold","secondary_identifiers":["PATO:0000707"],"synonyms":[{"name":"low threshold","type":"exact"}],"termid":"PATO:0000708"}


id: PBO:0047843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucose-1-phosphate guanylyltransferase","termid":"PBO:0047843"}


id: GO:0047109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethyl (S)-3-hydroxyhexanoate + NADP+ = ethyl 3-oxohexanoate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.280","RHEA:18269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(S)-3-hydroxyacid-ester dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.56-RXN","KEGG_REACTION:R04106"],"synonyms":[{"name":"(S)-3-hydroxyacid ester dehydrogenase activity","type":"exact"},{"name":"3-oxo ester (S)-reductase activity","type":"related"},{"name":"ethyl-(S)-3-hydroxyhexanoate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047109"}


id: PR:000027619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 phosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:Q10424-1, MOD:00696.","definition_xrefs":["PMID:15660136","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zip1/PhosRes+","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor zip1 phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-zip1/PhosRes+","type":"exact"},{"name":"zip1/PhosRes+","type":"exact"}],"termid":"PR:000027619"}


id: PBO:0031462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_conjugation","termid":"PBO:0031462"}


id: PATO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000098 insecticide sensitivity (obsolete PATO:0000098)","termid":"PATO:0000098"}


id: MONDO:0017469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital elbow dislocation","secondary_identifiers":["Orphanet:295032","MEDGEN:539330","GARD:21210","icd11.foundation:1593186141","UMLS:C0265561"],"synonyms":[{"name":"congenital radial head dislocation","type":"exact"},{"name":"isolated congenital elbow dislocation","type":"exact"},{"name":"isolated congenital radial head dislocation","type":"related"}],"termid":"MONDO:0017469","xrefs":{"Monarch":{"xref_id":"0017469"}}}


id: MONDO:0007572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary familial polycythemia is an inherited hematological disorder resulting from mutations in the erythropoietin (EPO) receptor and is characterized by an elevated absolute red blood cell mass caused by uncontrolled red blood cell production in the presence of low EPO levels.","definition_xrefs":["Orphanet:90042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"primary familial polycythemia due to EPO receptor mutation","secondary_identifiers":["icd11.foundation:962836252","MEDGEN:1641215","OMIM:133100","UMLS:C4551637","DOID:0060652","GARD:9843","SCTID:17342003","ICD9:289.6"],"synonyms":[{"name":"ECYT1","type":"related"},{"name":"EPOR familial polycythemia","type":"exact"},{"name":"PFCP","type":"exact"},{"name":"autosomal dominant benign erythrocytosis","type":"related"},{"name":"congenital erythrocytosis due to erythropoietin receptor mutation","type":"exact"},{"name":"congenital polycythemia due to erythropoietin receptor mutation","type":"exact"},{"name":"erythrocytosis autosomal dominant benign","type":"related"},{"name":"erythrocytosis, autosomal dominant benign","type":"related"},{"name":"erythrocytosis, familial, 1","type":"exact"},{"name":"erythrocytosis, familial, type 1","type":"exact"},{"name":"erythrocytosis, somatic","type":"exact"},{"name":"familial erythrocytosis","type":"exact"},{"name":"familial erythrocytosis 1","type":"exact"},{"name":"familial erythrocytosis type 1","type":"exact"},{"name":"familial erythrocytosis, 1","type":"exact"},{"name":"familial polycythemia caused by mutation in EPOR","type":"exact"},{"name":"polycythemia, primary familial and congenital","type":"related"},{"name":"primary congenital erythrocytosis","type":"exact"},{"name":"primary familial and congenital polycythemia","type":"exact"},{"name":"primary familial polycythemia","type":"related"}],"termid":"MONDO:0007572","xrefs":{"Monarch":{"xref_id":"0007572"}}}


id: MOD:01077
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanedithiol/TFA cyclic adduct","termid":"MOD:01077"}


id: MONDO:0017375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital viral infections with enteroviruses (EV) including coxsackie viruses and ECHO viruses is an infectious embryofetopathy that have been reported to cause spontaneous abortion, stillbirth, fetal malformations and acute systemic illness in the newborn.","definition_xrefs":["Orphanet:292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enterovirus infectious disease","termid":"MONDO:0005747"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital enterovirus infection","secondary_identifiers":["SCTID:716865000","UMLS:C4274223","MEDGEN:904399","GARD:2130","icd11.foundation:1981771784"],"synonyms":[{"name":"antenatal enterovirus infection","type":"exact"},{"name":"congenital enterovirus infection","type":"exact"},{"name":"congenital enterovirus infectious disease","type":"exact"},{"name":"congenital infection caused by enterovirus","type":"exact"},{"name":"mother-to-child transmission of enterovirus infection","type":"exact"}],"termid":"MONDO:0017375","xrefs":{"Monarch":{"xref_id":"0017375"}}}


id: MONDO:0013030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the DSG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1BB","secondary_identifiers":["DOID:0110458","MESH:C567877","MEDGEN:414552","OMIM:612877","GARD:15588","UMLS:C2752072"],"synonyms":[{"name":"CMD1BB","type":"exact"},{"name":"DSG2 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1BB","type":"related"},{"name":"cardiomyopathy, dilated, type 1Bb","type":"exact"},{"name":"dilated cardiomyopathy type 1BB","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in DSG2","type":"exact"}],"termid":"MONDO:0013030","xrefs":{"Monarch":{"xref_id":"0013030"}}}


id: GO:0052661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-propane-1,2-diol + NAD+ = (S)-lactaldehyde + NADH + H+.","definition_xrefs":["RHEA:15933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactaldehyde reductase activity","termid":"GO:0008912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"S-lactaldehyde reductase activity","secondary_identifiers":["MetaCyc:LACTALDREDUCT-RXN","KEGG_REACTION:R02258"],"synonyms":[{"name":"(S)-propane-1,2-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"L-lactaldehyde:propanediol oxidoreductase activity","type":"related"}],"termid":"GO:0052661"}


id: PBO:0043592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXII alpha 1 chain","termid":"PBO:0043592"}


id: MONDO:0019588
data:
  {"annotated_genes":["SJAG_03007","SJAG_04558","SJAG_01538","SJAG_00164","SJAG_02463","SJAG_01941","SJAG_04856","SJAG_02155","SJAG_04554","SJAG_04409","SJAG_00244","SJAG_01400","SJAG_00082","SJAG_00488","SJAG_03536","SJAG_00365"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011067"},{"annotations":[88541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012091"},{"annotations":[87239,87238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010933"},{"annotations":[88684,88685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013471"},{"annotations":[88968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013386"},{"annotations":[87722,87723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014237"},{"annotations":[88651,88650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013489"},{"annotations":[89059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032740"},{"annotations":[87299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033199"},{"annotations":[88174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032639"},{"annotations":[89089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032761"},{"annotations":[89092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032762"},{"annotations":[89064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958277"},{"annotations":[89069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032749"}]},"cv_name":"mondo","definition":"Autosomal recessive form of nonsyndromic deafness.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prelingual non-syndromic genetic hearing loss","termid":"MONDO:0016297"},{"relation_name":"excluded_subClassOf","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00164":null,"SJAG_00244":null,"SJAG_00365":null,"SJAG_00488":null,"SJAG_01400":null,"SJAG_01538":null,"SJAG_01941":null,"SJAG_02155":null,"SJAG_02463":null,"SJAG_03007":null,"SJAG_03536":null,"SJAG_04409":null,"SJAG_04554":null,"SJAG_04558":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18117","MESH:C564609","OMIMPS:220290","MEDGEN:337623","Orphanet:90636","UMLS:C1846647","OMIM:607197","DOID:0050565"],"synonyms":[{"name":"autosomal recessive isolated neurosensory deafness type DFNB","type":"narrow"},{"name":"autosomal recessive isolated sensorineural deafness type DFNB","type":"narrow"},{"name":"autosomal recessive non-syndromic neurosensory deafness type DFNB","type":"narrow"},{"name":"autosomal recessive non-syndromic sensorineural deafness type DFNB","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive nonsyndromic genetic deafness","type":"narrow"},{"name":"deafness, autosomal recessive","type":"narrow"},{"name":"deafness, neurosensory nonsyndromic recessive, DFN","type":"narrow"},{"name":"hearing loss, autosomal recessive","type":"exact"},{"name":"nonsyndromic deafness, autosomal recessive","type":"narrow"},{"name":"nonsyndromic genetic deafness, autosomal recessive","type":"narrow"}],"termid":"MONDO:0019588","terms_by_termid":{"MONDO:0010933":null,"MONDO:0011067":null,"MONDO:0012091":null,"MONDO:0013386":null,"MONDO:0013471":null,"MONDO:0013489":null,"MONDO:0014237":null,"MONDO:0032639":null,"MONDO:0032740":null,"MONDO:0032749":null,"MONDO:0032761":null,"MONDO:0032762":null,"MONDO:0033199":null,"MONDO:0958277":null},"xrefs":{"Monarch":{"xref_id":"0019588"}}}


id: MONDO:0016455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus-associated trichodysplasia spinulosa is a rare infectious skin disease characterized by the development of follicular papules with keratin spicules in various parts of the body, predominantly in the face (e.g. nose, eyebrows, auricles), that is due to polyomavirus infection in immunocompromized patients.","definition_xrefs":["Orphanet:228379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"virus-associated trichodysplasia spinulosa","secondary_identifiers":["UMLS:C3267126","GARD:20592","MEDGEN:1432798"],"synonyms":[{"name":"Cyclosporine-induced folliculodystrophy","type":"exact"},{"name":"TS","type":"exact"},{"name":"VATS","type":"exact"},{"name":"pilomatrix dysplasia","type":"exact"},{"name":"trichodysplasia spinulosa","type":"exact"}],"termid":"MONDO:0016455","xrefs":{"Monarch":{"xref_id":"0016455"}}}


id: PBO:0091983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family heat shock protein Ssa2","termid":"PBO:0091983"}


id: FYPO:0002669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-glutamate-N-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal peptide-glutamate-N-acetyltransferase activity","termid":"FYPO:0002669"}


id: MONDO:0004596
data:
  {"annotated_genes":["SJAG_04757","SJAG_03866"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88560,88559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","definition":"Hypertrophy and dilation of the right ventricle of the heart that is caused by pulmonary hypertension. This condition is often associated with pulmonary parenchymal or vascular diseases, such as chronic obstructive pulmonary disease and pulmonary embolism.","definition_xrefs":["MESH:D011660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congestive heart failure","termid":"MONDO:0005009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cor pulmonale","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:18765","ICD10CM:I27.81","SCTID:274096000","UMLS:C0034072","DOID:8515","icd11.foundation:738218522"],"synonyms":[{"name":"cardiopulmonary disease","type":"exact"},{"name":"cor pulmonale","type":"exact"},{"name":"disease, pulmonary heart","type":"related"},{"name":"diseases, pulmonary heart","type":"related"},{"name":"heart disease, pulmonary","type":"related"},{"name":"heart diseases, pulmonary","type":"related"},{"name":"pulmonary heart disease","type":"exact"},{"name":"pulmonary heart diseases","type":"related"}],"termid":"MONDO:0004596","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0004596"}}}


id: PBO:0017431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_enzyme","termid":"PBO:0017431"}


id: MONDO:0020711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid hormone resistance syndrome characterized by resistance in peripheral tissues but not in the pituitary.","definition_xrefs":["PMID:8475937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone resistance syndrome","termid":"MONDO:0001328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"selective peripheral resistance to thyroid hormone","synonyms":[{"name":"PerRTH","type":"exact"}],"termid":"MONDO:0020711","xrefs":{"Monarch":{"xref_id":"0020711"}}}


id: GO:0097608
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A motile cilium found in dinoflagellates. It coils around the cell and provides the forward thrust for motility. It is often contained in a furrow called the cingulum, and emerges from a flagellar pore located in the cingulum.","definition_xrefs":["Wikipedia:Dinoflagellate#Morphology","GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"transverse flagellum","synonyms":[{"name":"transverse cilium","type":"exact"}],"termid":"GO:0097608"}


id: PBO:0032701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0032701"}


id: PR:Q9UTI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gammaproteobacterial-type dihydroorotase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.03c","secondary_identifiers":["UniProtKB:Q9UTI0"],"synonyms":[{"name":"DHOase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gammaproteo-pyrC","type":"exact"}],"termid":"PR:Q9UTI0"}


id: GO:0097572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two nuclei found in Giardia species (trophozoite stage). It is located on the right side of the cell when viewed from the dorsal side.","definition_xrefs":["GOC:giardia","ISBN:0-444-81258-X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"right nucleus","termid":"GO:0097572"}


id: MONDO:0008594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, skin tumor disorder characterized by childhood-onset of multiple, benign, asymptomatic, white to flesh-colored papules predominantly located on the face, ears, neck and trunk, not associated with systemic organ involvement, associated malignancies or FLCN gene locus mutation.","definition_xrefs":["Orphanet:538756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial multiple discoid fibromas","secondary_identifiers":["GARD:8479","MEDGEN:348201","MESH:C536847","OMIM:190340","UMLS:C1860850"],"synonyms":[{"name":"FMDF","type":"exact"},{"name":"discoid fibromas, familial multiple","type":"related"},{"name":"familial multiple trichodiscomas","type":"related"},{"name":"hereditary multiple trichodiscomas","type":"related"},{"name":"small benign fibrovascular tumor of the dermal part of the hair disk","type":"related"},{"name":"small benign fibrovascular tumour of the dermal part of the hair disc","type":"related"},{"name":"trichodiscomas, familial multiple","type":"related"}],"termid":"MONDO:0008594","xrefs":{"Monarch":{"xref_id":"0008594"}}}


id: GO:0048704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skeleton are generated and organized during the embryonic phase.","definition_xrefs":["PMID:16049113","GOC:tb","GOC:jid","GOC:dsf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"},{"relation_name":"is_a","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"embryonic skeletal system development","termid":"GO:0048706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal system morphogenesis","synonyms":[{"name":"embryonic skeletal morphogenesis","type":"exact"}],"termid":"GO:0048704"}


id: GO:0075020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont calcium or calmodulin-mediated signal transduction during appressorium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium or calmodulin-mediated activation of appressorium formation (obsolete GO:0075020)","synonyms":[{"name":"Ca++ or calmodulin-mediated activation of appressorium formation","type":"exact"},{"name":"Ca2+ or calmodulin-mediated activation of appressorium formation","type":"exact"}],"termid":"GO:0075020"}


id: PBO:0060366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenin promoter associated myogenic regulatory antisense long non coding RNA","termid":"PBO:0060366"}


id: PBO:0039575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 3","termid":"PBO:0039575"}


id: PATO:0000535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000535 salt sensitivity value (obsolete PATO:0000535)","termid":"PATO:0000535"}


id: GO:1904879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion transmembrane transport via high voltage-gated calcium channel.","definition_xrefs":["GO_REF:0000058","PMID:23071515","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport via high voltage-gated calcium channel","termid":"GO:1902514"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"calcium ion transmembrane transport via high voltage-gated calcium channel","termid":"GO:0061577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of calcium ion transmembrane transport via high voltage-gated calcium channel","synonyms":[{"name":"activation of generation of L-type calcium current","type":"narrow"},{"name":"positive regulation of generation of L-type calcium current","type":"related"},{"name":"up regulation of generation of L-type calcium current","type":"exact"},{"name":"up-regulation of generation of L-type calcium current","type":"exact"},{"name":"upregulation of generation of L-type calcium current","type":"exact"}],"termid":"GO:1904879"}


id: PBO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1 (predicted)","termid":"PBO:0005136"}


id: MONDO:0013568
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89253,89254],"is_not":false,"summary":null,"term":"MONDO:0013568"}]},"cv_name":"mondo","definition":"Any familial sick sinus syndrome in which the cause of the disease is a mutation in the MYH6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"sick sinus syndrome 3, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614090","UMLS:C3279791","MEDGEN:481421"],"synonyms":[{"name":"MYH6 familial sick sinus syndrome","type":"exact"},{"name":"SSS3","type":"related"},{"name":"familial sick sinus syndrome caused by mutation in MYH6","type":"exact"},{"name":"sick sinus syndrome 3","type":"exact"},{"name":"sick sinus syndrome 3, susceptibility to","type":"exact"},{"name":"susceptibility to sick sinus syndrome 3","type":"related"}],"termid":"MONDO:0013568","terms_by_termid":{"MONDO:0013568":null},"xrefs":{"Monarch":{"xref_id":"0013568"}}}


id: PBO:0005687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein Ima1","termid":"PBO:0005687"}


id: GO:1990220
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Bacterial chaperonin complex consisting of a heptameric 10kDa chaperonin subunit GroES and a tetradecameric (2x7) 60kDa chaperonin subunit GroEL. The 60kDa subunit possesses ATPase activity while the holo-enzyme is responsible for the correct folding of proteins.","definition_xrefs":["PMID:15313620","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chaperonin ATPase complex","termid":"GO:0016465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"GroEL-GroES complex","synonyms":[{"name":"bacterial chaperonin ATPase complex","type":"related"},{"name":"bacterial chaperonin complex","type":"related"}],"termid":"GO:1990220"}


id: MOD:00262
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a peptide bond between a C-terminal L-glutamic acid residue and a free L-tyrosine.","definition_xrefs":["PubMed:6387372","PubMed:8093886","RESID:AA0257","ChEBI:21477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-glutamyl)-L-tyrosine","synonyms":[{"name":"(S,S)-2-(2-aminopentanedio-1-yl)amino-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"L-glutamyl L-tyrosine","type":"exact"},{"name":"N-(L-glutamyl)-L-tyrosine","type":"exact"},{"name":"SITE Involved in polymerization","type":"exact"}],"termid":"MOD:00262"}


id: MONDO:0958333
data:
  {"annotated_genes":["SJAG_02951","SJAG_03818","SJAG_01784"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89095,89096,89097],"is_not":false,"summary":null,"term":"MONDO:0958333"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 13, syndromic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1856296","OMIM:620776","UMLS:C5935599"],"termid":"MONDO:0958333","terms_by_termid":{"MONDO:0958333":null},"xrefs":{"Monarch":{"xref_id":"0958333"}}}


id: PBO:0083516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MES1/YGR264C, which encodes methionyl-tRNA synthetase","termid":"PBO:0083516"}


id: PBO:0082719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex; binds to and modulates the activity of RNA polymerases I and II; required for expression of certain genes, modification of some histones, and telomere maintenance; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay; protein abundance increases in response to DNA replication stress; human homolog, parafibromin, is a tumour suppressor linked to breast, renal and gastric cancers","termid":"PBO:0082719"}


id: PBO:0039116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activation induced cytidine deaminase","termid":"PBO:0039116"}


id: PBO:0011404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell,_anatomy,_cellular_component,_biological_process_and_developmental_stage","termid":"PBO:0011404"}


id: GO:0060392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the SMAD protein signaling pathway.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SMAD protein signal transduction","termid":"GO:0060390"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"SMAD protein signal transduction","termid":"GO:0060395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of SMAD protein signal transduction","synonyms":[{"name":"negative regulation of SMAD protein import into nucleus","type":"narrow"},{"name":"negative regulation of SMAD protein nuclear translocation","type":"narrow"}],"termid":"GO:0060392"}


id: MONDO:0018047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial thrombomodulin anomalies","secondary_identifiers":["UMLS:C2931365","HGNC:11784","MEDGEN:419059","MESH:C536900","Orphanet:3324","GARD:5195"],"synonyms":[{"name":"thrombomodulin anomalies, familial","type":"related"}],"termid":"MONDO:0018047","xrefs":{"Monarch":{"xref_id":"0018047"}}}


id: GO:0140148
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Gel formed of proteglycans filling the basement membrane ECM space.","definition_xrefs":["PMID:21421915","PMID:28324731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gel phase of basement membrane","termid":"GO:0140148"}


id: PBO:0064345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A3","termid":"PBO:0064345"}


id: GO:0047386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 2,6-bisphosphate + H2O = beta-D-fructofuranose 2-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.54","RHEA:13333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"fructose-2,6-bisphosphate 6-phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.54-RXN","KEGG_REACTION:R02730"],"synonyms":[{"name":"D-fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"},{"name":"beta-D-fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"},{"name":"fructose 2,6-bisphosphate-6-phosphohydrolase activity","type":"related"},{"name":"fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"}],"termid":"GO:0047386"}


id: PBO:0069246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 501, pseudogene","termid":"PBO:0069246"}


id: PBO:0017463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_host","termid":"PBO:0017463"}


id: PBO:0083690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme of 'de novo' purine biosynthesis; contains both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities; ADE16 has a paralog, ADE17, that arose from the whole genome duplication; ade16 ade17 mutants require adenine and histidine","termid":"PBO:0083690"}


id: MONDO:0012103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 25 (SCA25) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by cerebellar ataxia and prominent sensory neuropathy.","definition_xrefs":["Orphanet:101111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 25","secondary_identifiers":["MESH:C537202","GARD:9996","icd11.foundation:8347192","SCTID:718770005","DOID:0050974","OMIM:608703","MEDGEN:373347","UMLS:C1837518"],"synonyms":[{"name":"SCA25","type":"exact"},{"name":"spinocerebellar ataxia 25","type":"related"}],"termid":"MONDO:0012103","xrefs":{"Monarch":{"xref_id":"0012103"}}}


id: GO:0009966
data:
  {"annotated_genes":["SJAG_02169","SJAG_03631","SJAG_03089","SJAG_04910","SJAG_03355","SJAG_01142","SJAG_03903","SJAG_04496","SJAG_02000","SJAG_06622","SJAG_02682","SJAG_03568","SJAG_03488","SJAG_04259","SJAG_02135","SJAG_00424","SJAG_04551","SJAG_04329","SJAG_02878","SJAG_02392","SJAG_04206","SJAG_00169","SJAG_03969","SJAG_01679","SJAG_06621","SJAG_01253","SJAG_01983","SJAG_02765","SJAG_00078","SJAG_03681","SJAG_03501","SJAG_03678","SJAG_00209","SJAG_00526","SJAG_03453","SJAG_02233","SJAG_01032","SJAG_03072","SJAG_01297","SJAG_03799","SJAG_03126","SJAG_00991","SJAG_03263","SJAG_01790","SJAG_04666","SJAG_05000","SJAG_01837","SJAG_06588","SJAG_03185","SJAG_03928","SJAG_00229","SJAG_02183","SJAG_03353","SJAG_03705","SJAG_01199","SJAG_01787","SJAG_02605","SJAG_04522","SJAG_02311","SJAG_00457","SJAG_01885","SJAG_01181","SJAG_05184","SJAG_01245","SJAG_00883","SJAG_01114","SJAG_00289","SJAG_03893","SJAG_04235","SJAG_04455","SJAG_00990","SJAG_00027","SJAG_01184","SJAG_00975","SJAG_03828","SJAG_00082","SJAG_00610","SJAG_02013","SJAG_04776","SJAG_03048","SJAG_04249","SJAG_02336","SJAG_00600","SJAG_03592","SJAG_00845","SJAG_02379","SJAG_02486","SJAG_03486","SJAG_04825","SJAG_00642","SJAG_00266","SJAG_02231","SJAG_01632","SJAG_02514","SJAG_01150","SJAG_01187","SJAG_02481","SJAG_00293","SJAG_03508","SJAG_06592","SJAG_00781","SJAG_06270","SJAG_03907","SJAG_00318","SJAG_01805","SJAG_00688","SJAG_03327","SJAG_02945","SJAG_05346","SJAG_00875","SJAG_00143","SJAG_01978","SJAG_03405","SJAG_04462","SJAG_02426","SJAG_01587","SJAG_03371","SJAG_02858","SJAG_02424","SJAG_05030","SJAG_02389","SJAG_03936","SJAG_03974","SJAG_01464","SJAG_00561","SJAG_04943","SJAG_01386","SJAG_02451","SJAG_00824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116267,101540,110230,113954,109202,115780,92668,117899,105846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[118378,109945,94038,94698,102398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[102956,118126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[109583,109015,120336,105753,97800,101389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[104797,91383,104098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[96146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[93616,96985,101391,120337,97923,119083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[90152,109108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[95269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[74215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[73435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[103231,74796,92672,97588,94876,95404,93684,109070,107008,94791,112154,109203,109513,101542,117902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[107861,113705,93187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[75059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[111656,104967,100828,75438,98050,101524,107098,111250,118127,118482,116572,115972,115153,63080,75545,81802,89967,95275,103413,120046,109120,119046,120240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[118273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"},{"annotations":[112970,104101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[91384,90029,94365,119909,92715,69564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[115785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[118675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[119376,120300,110921,110918,110917,110922,97209,113812,110919,110920,110923,114476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[92794,117589,105655,90088,116619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[89475,112514,91950,104340,95757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[115434,62456,80305,115433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[74898,71068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[96265,112530,78667,77793,114856,77284,74423,75889,78332,90256,98051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[108965,93142,99695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"},{"annotations":[76611,82304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043408"},{"annotations":[103297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[76765,71900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032483"},{"annotations":[91912,115362,106459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031029"},{"annotations":[117482,94843,96001,109822,119798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":129,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00078":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00229":null,"SJAG_00266":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00526":null,"SJAG_00561":null,"SJAG_00600":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00688":null,"SJAG_00781":null,"SJAG_00824":null,"SJAG_00845":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01199":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01297":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01587":null,"SJAG_01632":null,"SJAG_01679":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01885":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02169":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02379":null,"SJAG_02389":null,"SJAG_02392":null,"SJAG_02424":null,"SJAG_02426":null,"SJAG_02451":null,"SJAG_02481":null,"SJAG_02486":null,"SJAG_02514":null,"SJAG_02605":null,"SJAG_02682":null,"SJAG_02765":null,"SJAG_02858":null,"SJAG_02878":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03488":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03568":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03705":null,"SJAG_03799":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03928":null,"SJAG_03936":null,"SJAG_03969":null,"SJAG_03974":null,"SJAG_04206":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04329":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04496":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04825":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_05000":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_05346":null,"SJAG_06270":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of signal transduction","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0035466"],"synonyms":[{"name":"regulation of signaling pathway","type":"related"},{"name":"regulation of signalling pathway","type":"related"}],"termid":"GO:0009966","terms_by_termid":{"GO:0031029":null,"GO:0031030":null,"GO:0031031":null,"GO:0032007":null,"GO:0032008":null,"GO:0032483":null,"GO:0035024":null,"GO:0043408":null,"GO:0046580":null,"GO:0050850":null,"GO:0062038":null,"GO:0090029":null,"GO:0090267":null,"GO:0106057":null,"GO:0110034":null,"GO:0140499":null,"GO:0180040":null,"GO:1900745":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903139":null,"GO:1903432":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:1904263":null,"GO:1904515":null,"GO:1905325":null,"GO:1905326":null,"GO:2000639":null,"GO:2000640":null}}


id: GO:0120514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-hydro-2'-hydroxy-beta-oxodihydrochalcone + UDP-alpha-D-glucose = a 3'-(beta-D-glucopyranosyl)-2'-hydroxy-beta-oxodihydrochalcone + H+ + UDP.","definition_xrefs":["RHEA:51504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyflavanone C-glucosyltransferase activity","secondary_identifiers":["EC:2.4.1.360","MetaCyc:RXN-18732"],"termid":"GO:0120514"}


id: PBO:0049663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 histone pseudogene 1","termid":"PBO:0049663"}


id: PBO:0004143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase Fab1","termid":"PBO:0004143"}


id: GO:0031457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycine betaine, N-trimethylglycine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine catabolic process","synonyms":[{"name":"N-trimethylglycine catabolic process","type":"exact"},{"name":"N-trimethylglycine catabolism","type":"exact"},{"name":"glycine betaine breakdown","type":"exact"},{"name":"glycine betaine catabolism","type":"exact"},{"name":"glycine betaine degradation","type":"exact"}],"termid":"GO:0031457"}


id: PBO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Sod2","termid":"PBO:0000101"}


id: PBO:0079491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC11 antisense RNA 1","termid":"PBO:0079491"}


id: PBO:0004149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF757 family protein","termid":"PBO:0004149"}


id: MONDO:0019183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited odontologic disease (obsolete MONDO:0019183)","secondary_identifiers":["Orphanet:77830"],"termid":"MONDO:0019183","xrefs":{"Monarch":{"xref_id":"0019183"}}}


id: SO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002117 <new term> (obsolete SO:0002117)","termid":"SO:0002117"}


id: PBO:0012271
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdr1-related transcription factor","termid":"PBO:0012271"}


id: PBO:0053864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1139","termid":"PBO:0053864"}


id: PBO:0073001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 2","termid":"PBO:0073001"}


id: MONDO:0044334
data:
  {"annotated_genes":["SJAG_00490","SJAG_05346","SJAG_01111","SJAG_02855","SJAG_04755","SJAG_04213","SJAG_00991","SJAG_05313","SJAG_00289","SJAG_00031","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[87248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[88866,88867,88865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"},{"annotations":[88610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[87101,87100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89273,89274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[88872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that affects the connective and soft tissue.","definition_xrefs":["NCIT:C3810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00289":null,"SJAG_00490":null,"SJAG_00991":null,"SJAG_01111":null,"SJAG_02855":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"connective and soft tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0206765","MEDGEN:60224"],"synonyms":[{"name":"connective and soft tissue neoplasm","type":"exact"},{"name":"connective and soft tissue tumor","type":"exact"},{"name":"connective and soft tissue tumour","type":"exact"},{"name":"musculoskeletal and soft tissue neoplasm","type":"exact"},{"name":"musculoskeletal and soft tissue tumor","type":"exact"},{"name":"musculoskeletal and soft tissue tumour","type":"exact"},{"name":"neoplasm of skeletal and soft tissue","type":"exact"},{"name":"neoplasm of soft tissue and bone","type":"exact"},{"name":"neoplasm of soft tissue and skeleton","type":"exact"},{"name":"skeletal and soft tissue neoplasm","type":"exact"},{"name":"skeletal and soft tissue tumor","type":"exact"},{"name":"skeletal and soft tissue tumour","type":"exact"},{"name":"soft tissue and bone neoplasm","type":"exact"},{"name":"soft tissue and bone tumor","type":"exact"},{"name":"soft tissue and bone tumour","type":"exact"},{"name":"tumor of skeletal and soft tissue","type":"exact"},{"name":"tumor of soft tissue and bone","type":"exact"},{"name":"tumor of soft tissue and skeleton","type":"exact"},{"name":"tumour of skeletal and soft tissue","type":"exact"},{"name":"tumour of soft tissue and bone","type":"exact"},{"name":"tumour of soft tissue and skeleton","type":"exact"}],"termid":"MONDO:0044334","terms_by_termid":{"MONDO:0007908":null,"MONDO:0010621":null,"MONDO:0011655":null,"MONDO:0011705":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0044334"}}}


id: GO:0075293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the pH conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host pH environment","synonyms":[{"name":"response of symbiont to host pH environment","type":"exact"}],"termid":"GO:0075293"}


id: PBO:0002864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis-inducing factor homolog Aif1 (predicted)","termid":"PBO:0002864"}


id: PR:Q09797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22G7.03 gene.","definition_xrefs":["UniProtKB:Q09797","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22G7.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.03","synonyms":[{"name":"Spom972h-SPAC22G7.03","type":"exact"}],"termid":"PR:Q09797"}


id: PBO:0088703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP4 subunit Gfh1","termid":"PBO:0088703"}


id: PBO:0089945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein","termid":"PBO:0089945"}


id: PBO:0071536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene","termid":"PBO:0071536"}


id: MONDO:0042908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schaap-Taylor-Baraitser syndrome (obsolete MONDO:0042908)","termid":"MONDO:0042908","xrefs":{"Monarch":{"xref_id":"0042908"}}}


id: GO:0021814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell along the process of a radial glial cell involved in cerebral cortex glial-mediated radial migration.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls","PMID:12626695","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"cell locomotion involved in cerebral cortex glial-mediated radial migration","type":"exact"},{"name":"cell locomotion involved in cerebral cortex radial glia guided migration","type":"related"}],"termid":"GO:0021814"}


id: PBO:0003605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP assembly protein Shq1 (predicted)","termid":"PBO:0003605"}


id: PBO:0049249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRPEL2 pseudogene 3","termid":"PBO:0049249"}


id: PATO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000475 threshability value (obsolete PATO:0000475)","termid":"PATO:0000475"}


id: PATO:0002533
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A multipartite quality inhering in a bearer by virtue of the bearer being divided into two parts.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multipartite","termid":"PATO:0002510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipartite","termid":"PATO:0002533"}


id: MOD:01219
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9750125","Unimod:286#D","PubMed:9254591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), heavy C13","termid":"MOD:00606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13 - site D","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:01219"}


id: FYPO:0004195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the telomere of a chromosome is normal (i.e. indistinguishable from wild type) during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to telomere during meiosis","synonyms":[{"name":"normal protein localisation to chromosome, telomeric region, during meiosis","type":"exact"},{"name":"normal protein localisation to telomere during meiosis","type":"exact"},{"name":"normal protein localization to chromosome, telomeric region, during meiosis","type":"exact"},{"name":"normal protein localization to telomere during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004195"}


id: PBO:0030567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_alanine_level","termid":"PBO:0030567"}


id: CHEBI:61049
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tacrolimus (anhydrous)","termid":"CHEBI:61049"}


id: MONDO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An affective disorder characterized by periods of depression and hypomania. These may be separated by periods of normal mood.","definition_xrefs":["MESH:D003527"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclothymic disorder","secondary_identifiers":["icd11.foundation:1427638883","MEDGEN:1198","UMLS:C0010598","ICD10CM:F34.0","ICD9:301.13","ICD9:301.10","DOID:845","SCTID:76105009","ICD9:301.1"],"synonyms":[{"name":"affective personality disorder","type":"exact"},{"name":"cycloid personality","type":"exact"},{"name":"cyclothymia","type":"exact"},{"name":"cyclothymic personality","type":"exact"}],"termid":"MONDO:0004572","xrefs":{"Monarch":{"xref_id":"0004572"}}}


id: FYPO:0001837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle pole body for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle pole body","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"increased duration of protein localization to mitotic SPB","type":"exact"},{"name":"increased duration of protein localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001837"}


id: PBO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.16","termid":"PBO:0000610"}


id: PBO:0057940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3665","termid":"PBO:0057940"}


id: PBO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucosidase I Gls1 (predicted)","termid":"PBO:0001947"}


id: MONDO:1040051
data:
  {"annotated_genes":["SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013454"},{"annotations":[88244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008379"}]},"cv_name":"mondo","definition":"Any retinopathy caused by a variant in the IMPDH1 gene.","definition_xrefs":["PMID:37259572","PMID:11875049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"IMPDH1-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"IMPDH1-related retinopathy","type":"exact"}],"termid":"MONDO:1040051","terms_by_termid":{"MONDO:0008379":null,"MONDO:0013454":null},"xrefs":{"Monarch":{"xref_id":"1040051"}}}


id: GO:0141034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that disrupts the host actin cytoskeleton by inhibiting host actin from polymerizing. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23409096","PMID:24253566","PMID:30297616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via inhibition of actin polymerization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via inhibition of actin polymerization","type":"exact"}],"termid":"GO:0141034"}


id: PBO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dienelactone hydrolase family","termid":"PBO:0000111"}


id: PBO:0075023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-34","termid":"PBO:0075023"}


id: GO:0051299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which duplicated centrosome components move away from each other. The centriole pair within each centrosome becomes part of a separate microtubule organizing center that nucleates a radial array of microtubules called an aster. The two asters move to opposite sides of the nucleus to form the two poles of the mitotic spindle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"centrosome separation","termid":"GO:0051299"}


id: GO:0008692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoyl-CoA = (R)-3-hydroxybutanoyl-CoA.","definition_xrefs":["EC:5.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA epimerase activity","secondary_identifiers":["MetaCyc:OHBUTYRYL-COA-EPIM-RXN","RHEA:21760"],"synonyms":[{"name":"3-hydroxyacyl-CoA epimerase activity","type":"related"},{"name":"3-hydroxybutanoyl-CoA 3-epimerase activity","type":"related"},{"name":"3-hydroxybutyryl coenzyme A epimerase activity","type":"related"}],"termid":"GO:0008692"}


id: GO:0030903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord development","termid":"GO:0030903"}


id: MONDO:0800461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The spectrum of COL4A1-related disorders includes small-vessel brain disease of varying severity including porencephaly, variably associated with eye defects (retinal arterial tortuosity, Axenfeld-Rieger anomaly, cataract) and systemic findings (kidney involvement, muscle cramps, cerebral aneurysms, Raynaud phenomenon, cardiac arrhythmia, and hemolytic anemia).","definition_xrefs":["PMID:20301768"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"COL4A1/A2-related disorder","termid":"MONDO:1010150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL4A1-related disorder","synonyms":[{"name":"COL4A1-related disorders","type":"exact"}],"termid":"MONDO:0800461","xrefs":{"Monarch":{"xref_id":"0800461"}}}


id: FYPO:0004629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic DNA replication is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA replication","termid":"FYPO:0001133"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic DNA replication","synonyms":[{"name":"normal DNA replication during mitotic cell cycle","type":"exact"},{"name":"normal DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0004629"}


id: GO:0006546
data:
  {"annotated_genes":["SJAG_03861","SJAG_03641","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76065,79933,98362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycine catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6783984"],"synonyms":[{"name":"glycine breakdown","type":"exact"},{"name":"glycine catabolism","type":"exact"},{"name":"glycine degradation","type":"exact"}],"termid":"GO:0006546","terms_by_termid":{"GO:0019464":null}}


id: GO:0006571
data:
  {"annotated_genes":["SJAG_03312","SJAG_04652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78556,80624],"is_not":false,"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine metabolic process","termid":"GO:0006570"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process, prephenate pathway","termid":"GO:0009095"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process","termid":"GO:1902223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03312":null,"SJAG_04652":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"tyrosine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"tyrosine anabolism","type":"exact"},{"name":"tyrosine biosynthesis","type":"exact"},{"name":"tyrosine formation","type":"exact"},{"name":"tyrosine synthesis","type":"exact"}],"termid":"GO:0006571","terms_by_termid":{"GO:0006571":null}}


id: PBO:0054495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1895","termid":"PBO:0054495"}


id: PBO:0075969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 9","termid":"PBO:0075969"}


id: PBO:0081325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 114 pseudogene 1","termid":"PBO:0081325"}


id: PBO:0077947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 7-1","termid":"PBO:0077947"}


id: SO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The kink turn (K-turn) is an RNA structural motif that creates a sharp (~120 degree) bend between two continuous helices.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric_RNA_internal_loop","termid":"SO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K_turn_RNA_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/K-turn"],"synonyms":[{"name":"K turn RNA motif","type":"exact"},{"name":"K-turn","type":"exact"},{"name":"kink turn","type":"exact"},{"name":"kink-turn motif","type":"exact"}],"termid":"SO:0000023"}


id: PBO:0031318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sorbitol","termid":"PBO:0031318"}


id: PBO:0048540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guided entry of tail-anchored proteins factor 1","termid":"PBO:0048540"}


id: GO:0048716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of labrum are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"labrum development","termid":"GO:0048726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labrum morphogenesis","termid":"GO:0048716"}


id: MONDO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the liver.","definition_xrefs":["NCIT:C3869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"intra-abdominal hemangioma","termid":"MONDO:0002337"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"},{"relation_name":"is_a","term_name":"hepatobiliary benign neoplasm","termid":"MONDO:0859689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver hemangioma","secondary_identifiers":["DOID:271","MEDGEN:66765","SCTID:93469006","UMLS:C0238246"],"synonyms":[{"name":"angioma of liver","type":"exact"},{"name":"angioma of the liver","type":"related"},{"name":"hemangioma of liver","type":"exact"},{"name":"hemangioma of the liver","type":"related"},{"name":"hepatic angioma","type":"exact"},{"name":"hepatic hemangioma","type":"related"},{"name":"liver angioma","type":"related"},{"name":"liver hemangioma","type":"exact"}],"termid":"MONDO:0002404","xrefs":{"Monarch":{"xref_id":"0002404"}}}


id: FYPO:0002863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells elongate more slowly than normal when the cells are returned to nitrogen-rich medium following nitrogen starvation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell growth rate","termid":"FYPO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"slow cell growth during recovery from nitrogen starvation","synonyms":[{"name":"slow cell growth during recovery from nitrogen depletion","type":"exact"},{"name":"slow cell growth during recovery from nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002863"}


id: GO:0106394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"},{"relation_name":"negatively_regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of palmitic acid catabolic process","termid":"GO:0106394"}


id: GO:0048028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a simple or complex galacturonan. Galacturonan is any glycan composed solely of galacturonic acid residues, a specific type of glycuronan, and a constituent of some pectins.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"galacturonan binding","synonyms":[{"name":"polygalacturonide binding","type":"related"}],"termid":"GO:0048028"}


id: PBO:0067387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 492, pseudogene","termid":"PBO:0067387"}


id: PBO:0001491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Msa1","termid":"PBO:0001491"}


id: MONDO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-craniofacioskeletal syndrome is a rare, hereditary, syndromic intellectual disability characterized by craniofacial and skeletal abnormalities in association with mild intellectual disability in females and early postnatal lethality in males. In addition to mild cognitive impairment, females present with microcephaly, short stature, skeletal features and extra temporal lobe gyrus. In males, intrauterine growth impairment, cardiac and urogenital anomalies have been reported.","definition_xrefs":["Orphanet:163979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-craniofacioskeletal syndrome","secondary_identifiers":["MEDGEN:394716","GARD:17009","MESH:C567471","OMIM:300712","UMLS:C2678036"],"synonyms":[{"name":"craniofacioskeletal syndrome","type":"related"},{"name":"craniofacioskeletal syndrome, X-linked recessive, X-linked dominant","type":"exact"}],"termid":"MONDO:0010412","xrefs":{"Monarch":{"xref_id":"0010412"}}}


id: PBO:0089083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein","termid":"PBO:0089083"}


id: PBO:0028645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_morphology","termid":"PBO:0028645"}


id: MONDO:0019325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phakomatosis pigmentovascularis","termid":"MONDO:0017318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"phakomatosis cesioflammea","secondary_identifiers":["Orphanet:79483","GARD:19023","ICD9:759.6","SCTID:703284009","UMLS:C3838883","MEDGEN:824729"],"synonyms":[{"name":"phakomatosis pigmentovascularis type 2","type":"exact"}],"termid":"MONDO:0019325","xrefs":{"Monarch":{"xref_id":"0019325"}}}


id: PBO:0076646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBX2 antisense RNA 1","termid":"PBO:0076646"}


id: MONDO:0023071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"enterovirus infectious disease","termid":"MONDO:0005747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterovirus antenatal infection","termid":"MONDO:0023071","xrefs":{"Monarch":{"xref_id":"0023071"}}}


id: PBO:0074131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 32 member 1","termid":"PBO:0074131"}


id: MONDO:0014674
data:
  {"annotated_genes":["SJAG_03247"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89214],"is_not":false,"summary":null,"term":"MONDO:0014674"}]},"cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the APPL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0004335","MONDO:0019254","MONDO:0005015"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111111","GARD:16128","OMIM:616511","MEDGEN:908119","UMLS:C4225299"],"synonyms":[{"name":"APPL1 maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"MODY14","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in APPL1","type":"exact"},{"name":"maturity-onset diabetes of the young, type 14","type":"related"}],"termid":"MONDO:0014674","terms_by_termid":{"MONDO:0014674":null},"xrefs":{"Monarch":{"xref_id":"0014674"}}}


id: PBO:0062333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 72 pseudogene","termid":"PBO:0062333"}


id: GO:0048408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to epidermal growth factor.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"epidermal growth factor binding","synonyms":[{"name":"EGF binding","type":"exact"}],"termid":"GO:0048408"}


id: PBO:0087015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR) small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; relocalizes from nucleus to cytoplasm upon DNA replication stress; RNR4 has a paralog, RNR2, that arose from the whole genome duplication","termid":"PBO:0087015"}


id: GO:0051082
data:
  {"annotated_genes":["SJAG_01615","SJAG_04518","SJAG_00403","SJAG_01545","SJAG_04228","SJAG_01626","SJAG_05191","SJAG_00609","SJAG_03463","SJAG_00436","SJAG_01621","SJAG_01002","SJAG_04571","SJAG_04012","SJAG_02926","SJAG_01684","SJAG_04567","SJAG_03794","SJAG_03320","SJAG_03551","SJAG_01052","SJAG_03570","SJAG_02378","SJAG_04121","SJAG_00447","SJAG_05189","SJAG_02694","SJAG_04014","SJAG_00524","SJAG_01664","SJAG_03135","SJAG_01641","SJAG_04187","SJAG_01747","SJAG_03782"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58723,59652,60538,60770,62376,65884,68144,68426,69134,69228,71708,71729,71809,72174,72982,73581,74556,75501,76114,76224,77037,77300,78064,78077,78682,79945,80034,80462,80894,81035,81285,81422,81541,81677,82237],"is_not":false,"summary":null,"term":"GO:0051082"}]},"cv_name":"molecular_function","definition":"Binding to an unfolded protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00403":null,"SJAG_00436":null,"SJAG_00447":null,"SJAG_00524":null,"SJAG_00609":null,"SJAG_01002":null,"SJAG_01052":null,"SJAG_01545":null,"SJAG_01615":null,"SJAG_01621":null,"SJAG_01626":null,"SJAG_01641":null,"SJAG_01664":null,"SJAG_01684":null,"SJAG_01747":null,"SJAG_02378":null,"SJAG_02694":null,"SJAG_02926":null,"SJAG_03135":null,"SJAG_03320":null,"SJAG_03463":null,"SJAG_03551":null,"SJAG_03570":null,"SJAG_03782":null,"SJAG_03794":null,"SJAG_04012":null,"SJAG_04014":null,"SJAG_04121":null,"SJAG_04187":null,"SJAG_04228":null,"SJAG_04518":null,"SJAG_04567":null,"SJAG_04571":null,"SJAG_05189":null,"SJAG_05191":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"unfolded protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9694337","Reactome:R-HSA-9683772"],"synonyms":[{"name":"chaperone activity","type":"broad"}],"termid":"GO:0051082","terms_by_termid":{"GO:0051082":null}}


id: GO:0090417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of N-methylnicotinate from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"N-methylnicotinate transmembrane transporter activity","synonyms":[{"name":"N-methylnicotinate transporter activity","type":"related"}],"termid":"GO:0090417"}


id: PBO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent duplication","termid":"PBO:0000148"}


id: FYECO:0000262
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in a defined growth medium excluding nitrogen.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose minimal medium, excluding nitrogen","termid":"FYECO:0000262"}


id: GO:0006847
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100648],"is_not":false,"summary":null,"term":"GO:0006847"}]},"cv_name":"biological_process","definition":"The directed movement of acetate across a plasma membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate transmembrane transport","termid":"GO:0035433"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"plasma membrane acetate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006847","terms_by_termid":{"GO:0006847":null}}


id: PBO:0061068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein like","termid":"PBO:0061068"}


id: PBO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 23","termid":"PBO:0050206"}


id: PBO:0003345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3 alpha subunit (p135) (predicted)","termid":"PBO:0003345"}


id: GO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 4 isopentenyl diphosphate = 4 diphosphate + all-trans-heptaprenyl diphosphate.","definition_xrefs":["PMID:9708911","RHEA:27794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"heptaprenyl diphosphate synthase activity","secondary_identifiers":["GO:0036422","EC:2.5.1.30","MetaCyc:TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN"],"synonyms":[{"name":"HepPP synthase activity","type":"related"},{"name":"all-trans-heptaprenyl-diphosphate synthase activity","type":"exact"},{"name":"heptaprenyl pyrophosphate synthase activity","type":"related"},{"name":"heptaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"trans-hexaprenyltranstransferase activity","type":"exact"}],"termid":"GO:0000010"}


id: PBO:0071394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31","termid":"PBO:0071394"}


id: PBO:0080641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 88","termid":"PBO:0080641"}


id: MONDO:0005832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lymphatic vessels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphangitis","secondary_identifiers":["MEDGEN:7412","ICD9:457.2","EFO:0007351","ICD10CM:I89.1","NCIT:C34790","SCTID:1415005","MESH:D008205","icd11.foundation:1548743622","UMLS:C0024225","DOID:9317"],"synonyms":[{"name":"inflammation of lymphatic vessel","type":"exact"},{"name":"lymphatic vessel inflammation","type":"exact"}],"termid":"MONDO:0005832","xrefs":{"Monarch":{"xref_id":"0005832"}}}


id: PBO:0079283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 2","termid":"PBO:0079283"}


id: PBO:0064095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeodomain 1","termid":"PBO:0064095"}


id: MONDO:0013052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the KLHL7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 42","secondary_identifiers":["GARD:15593","MESH:C567854","DOID:0110386","ICD10CM:H35.5","MEDGEN:442864","OMIM:612943","UMLS:C2751986"],"synonyms":[{"name":"KLHL7 retinitis pigmentosa","type":"exact"},{"name":"RP42","type":"exact"},{"name":"retinitis pigmentosa 42","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in KLHL7","type":"exact"},{"name":"retinitis pigmentosa type 42","type":"exact"}],"termid":"MONDO:0013052","xrefs":{"Monarch":{"xref_id":"0013052"}}}


id: PBO:0048525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 2","termid":"PBO:0048525"}


id: PBO:0040312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 4","termid":"PBO:0040312"}


id: PR:Q10333
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pex11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.09","synonyms":[{"name":"Spom972h-pex11","type":"exact"}],"termid":"PR:Q10333"}


id: FYPO:0003482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to discrete regions in the cytoplasm, visible as foci or dots by microscopy, to a greater extent observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased punctate cytoplasmic protein localization","synonyms":[{"name":"increased protein localization to cytoplasmic puncta","type":"exact"},{"name":"increased punctate cytoplasmic protein localisation","type":"exact"},{"name":"increased punctate cytoplasmic protein localization during mitotic cell cycle","type":"related"},{"name":"increased punctate cytoplasmic protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0003482"}


id: PBO:0046971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member H","termid":"PBO:0046971"}


id: PBO:0080244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 7 pseudogene","termid":"PBO:0080244"}


id: PBO:0045720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4 pseudogene 1","termid":"PBO:0045720"}


id: GO:2001304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin B4. Lipoxin B4 is a C20 hydroxy fatty acid having (5S)-, (14R)- and (15S)-hydroxy groups as well as (6E)- (8Z)-, (10E)- and (12E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"lipoxin B4 metabolic process","synonyms":[{"name":"LXB4 metabolic process","type":"exact"},{"name":"LXB4 metabolism","type":"exact"},{"name":"lipoxin B4 metabolism","type":"exact"}],"termid":"GO:2001304"}


id: MONDO:0011164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, susceptibility to","termid":"MONDO:0800188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, susceptibility to, 6","secondary_identifiers":["MEDGEN:356150","MESH:C535699","UMLS:C1866076","OMIM:601888"],"synonyms":[{"name":"MHS6","type":"related"},{"name":"Mhs6","type":"related"},{"name":"malignant hyperpyrexia susceptibility type 6","type":"related"},{"name":"malignant hyperthermia susceptibility 6","type":"exact"},{"name":"malignant hyperthermia susceptibility type 6","type":"related"},{"name":"malignant hyperthermia, susceptibility to, 6","type":"exact"},{"name":"malignant hyperthermia, susceptibility to, type 6","type":"exact"}],"termid":"MONDO:0011164","xrefs":{"Monarch":{"xref_id":"0011164"}}}


id: MONDO:0015891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypogonadotropic hypogonadism associated with other endocrinopathies (obsolete MONDO:0015891)","secondary_identifiers":["Orphanet:181390"],"termid":"MONDO:0015891","xrefs":{"Monarch":{"xref_id":"0015891"}}}


id: MONDO:0009465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of intestinal atresia characterized by the presence of numerous atresic segments in the small bowel (duodenum) or large bowel and leading to symptoms of intestinal obstruction: vomiting, abdominal bloating and inability to pass meconium in newborns.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic intestinal malformation (obsolete MONDO:0015212)","termid":"MONDO:0015212"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"multiple intestinal atresia","secondary_identifiers":["UMLS:C0220744","GARD:3013","SCTID:95472001","MEDGEN:65090","MedDRA:10028210","ICD9:751.8","DOID:14671","MESH:C562441","Orphanet:2300"],"synonyms":[{"name":"CID-MIA/early-onset IBD","type":"related"},{"name":"GIDID","type":"related"},{"name":"combined immunodeficiency-enteropathy spectrum","type":"related"},{"name":"familial intestinal polyatresia syndrome","type":"related"},{"name":"gastrointestinal defects and immunodeficiency syndrome","type":"related"},{"name":"intestinal atresia multiple","type":"related"},{"name":"intestinal atresia, multiple","type":"related"},{"name":"intestinal atresia, multiple and/or inflammatory bowel disease with or without immunodeficiency","type":"related"},{"name":"multiple gastrointestinal atresias","type":"exact"},{"name":"multiple intestinal atresia","type":"exact"}],"termid":"MONDO:0009465","xrefs":{"Monarch":{"xref_id":"0009465"}}}


id: PBO:0076858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 2","termid":"PBO:0076858"}


id: GO:0043363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid precursor cell acquires specializes features of an erythrocyte with a nucleus, as found in non-mammalian vertebrates such as birds.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleate erythrocyte differentiation","synonyms":[{"name":"nucleate RBC differentiation","type":"exact"},{"name":"nucleate red blood cell differentiation","type":"exact"}],"termid":"GO:0043363"}


id: SO:0001004
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a sequence does not contain an equal distribution of all four possible nucleotide bases or does not contain all nucleotide bases.","direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low_complexity","synonyms":[{"name":"low complexity","type":"exact"}],"termid":"SO:0001004"}


id: PBO:0116690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allregulin","termid":"PBO:0116690"}


id: PBO:0012061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase predicted to be involved in tRNA threonylcarbamoyladenosine modification Pgp1","termid":"PBO:0012061"}


id: PBO:0082977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic thioredoxin reductase; key regulatory enzyme that determines the redox state of the thioredoxin system, which acts as a disulfide reductase system and protects cells against both oxidative and reductive stress; protein abundance increases in response to DNA replication stress; TRR1 has a paralog, TRR2, that arose from the whole genome duplication","termid":"PBO:0082977"}


id: GO:0035470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of angiogenesis","termid":"GO:0045766"},{"relation_name":"is_a","term_name":"regulation of vascular wound healing","termid":"GO:0061043"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"positively_regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular wound healing","termid":"GO:0035470"}


id: GO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases made as part of a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:12789499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"respiratory burst","termid":"GO:0045730"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in defense response","termid":"GO:0002679"}


id: GO:0030367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-17 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-17 receptor binding","synonyms":[{"name":"IL-17","type":"narrow"},{"name":"interleukin-17 receptor ligand","type":"narrow"}],"termid":"GO:0030367"}


id: PBO:0066237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 44","termid":"PBO:0066237"}


id: FYPO:0000883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","synonyms":[{"name":"decreased centromeric histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at centromere during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000883"}


id: FYPO:0005782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer mitotic checkpoint complexes than normal.","definition_xrefs":["PomBase:mah","GO:0033597","PMID:26882497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex level","synonyms":[{"name":"decreased MCC level","type":"related"},{"name":"decreased mitotic checkpoint complex level during mitotic cell cycle","type":"related"},{"name":"decreased mitotic checkpoint complex level during vegetative growth","type":"exact"},{"name":"mitotic checkpoint complexes present at decreased level","type":"exact"},{"name":"reduced mitotic checkpoint complex level","type":"exact"}],"termid":"FYPO:0005782"}


id: PBO:0091831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2427 family conserved fungal protein","termid":"PBO:0091831"}


id: GO:0008349
data:
  {"annotated_genes":["SJAG_03384"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102863],"is_not":false,"summary":null,"term":"GO:0008349"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of serine and threonine residues in a mitogen-activated protein kinase kinase kinase (MAPKKK), resulting in activation of MAPKKK. MAPKKK signaling pathways relay, amplify and integrate signals from the plasma membrane to the nucleus in response to a diverse range of extracellular stimuli.","definition_xrefs":["GOC:bf","PMID:11790549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0004672","GO:0140096","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"MAP kinase kinase kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-936991","Reactome:R-HSA-177692","Reactome:R-HSA-9645442"],"synonyms":[{"name":"MAP4K activity","type":"exact"},{"name":"MAPKKKK","type":"exact"}],"termid":"GO:0008349","terms_by_termid":{"GO:0008349":null}}


id: FYPO:0001714
data:
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id: MONDO:0011236
data:
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id: PBO:0091815
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF Eight-Six-Six","termid":"PBO:0091815"}


id: GO:0035396
data:
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id: PBO:0112955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnacentral_2d_structure_id","termid":"PBO:0112955"}


id: GO:0051495
data:
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id: MONDO:0031332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bleeding syndrome characterized by spontaneous mucocutaneous bleeding and an exaggerated response to trauma due to a constitutional thrombocytopenia","definition_xrefs":["Orphanet:849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Glanzmann thrombasthenia","termid":"MONDO:0100326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Glanzmann thrombasthenia 1","secondary_identifiers":["NCIT:C61249","OMIM:273800","GARD:15240","SCTID:32942005","MESH:D013915","DOID:2219"],"synonyms":[{"name":"BDPLT2","type":"exact"},{"name":"Diacyclothrombopathia 2B 3A","type":"related"},{"name":"GP IIb-IIIa Complex, deficiency of","type":"related"},{"name":"GT","type":"related"},{"name":"Glanzmann thrombasthenia","type":"broad"},{"name":"Glanzmann thrombasthenia 1","type":"exact"},{"name":"Glanzmann thrombasthenia type A","type":"related"},{"name":"Glanzmann's thrombasthenia","type":"broad"},{"name":"Platelet fibrinogen receptor, deficiency of","type":"related"},{"name":"Platelet glycoprotein 2B 3A deficiency","type":"related"},{"name":"Platelet glycoprotein IIb-IIIa deficiency","type":"related"},{"name":"Thrombocytasthenia","type":"exact"},{"name":"bleeding disorder, Platelet-type, 2","type":"related"},{"name":"deficiency of GP 2B 3A complex","type":"related"},{"name":"deficiency of GP IIb-IIIa complex","type":"exact"},{"name":"deficiency of glycoprotein complex IIb-IIIa","type":"exact"},{"name":"deficiency of platelet fibrinogen receptor","type":"exact"},{"name":"glycoprotein Complex IIb-IIIa, deficiency of","type":"related"},{"name":"glycoprotein IIb/IIIa defect","type":"exact"},{"name":"platelet glycoprotein IIb-IIIa deficiency","type":"exact"},{"name":"platelet-type bleeding disorder 2","type":"exact"},{"name":"thrombasthenia","type":"exact"},{"name":"thrombasthenia of Glanzmann and Naegeli","type":"exact"}],"termid":"MONDO:0031332","xrefs":{"Monarch":{"xref_id":"0031332"}}}


id: FYPO:0000045
data:
  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assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cds1delta":{"display_name":"cds1delta","display_uniquename":"cds1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04287:allele-1","expression":"Null"}]}]},"cem1delta":{"display_name":"cem1delta","display_uniquename":"cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A 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assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01680","SJAG_01205"],"name":"abnormal cell population growth","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null,"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_04464","SJAG_01410","SJAG_00266","SJAG_04551","SJAG_05207","SJAG_03453","SJAG_01794","SJAG_01205","SJAG_04697","SJAG_04671","SJAG_02763","SJAG_03892","SJAG_04312","SJAG_01242","SJAG_04703","SJAG_03360","SJAG_04287","SJAG_00364","SJAG_01355","SJAG_03449","SJAG_03198","SJAG_00514","SJAG_01787","SJAG_02527","SJAG_02592","SJAG_01680","SJAG_00409","SJAG_01946","SJAG_01605","SJAG_00429","SJAG_00610"],"single_locus_genotype_uniquenames":["rad3delta","pmk1delta","cmp7delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","shc1delta","pck2delta","vps32delta","rad9delta","cds1delta","chk1delta","crb2delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","ned1delta","sty1delta","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","mrc1delta","for3delta","oar2delta","cem1delta","vps4delta","ras1delta","scd2delta","rad51delta","atf1delta","rad26delta","cox6delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","man1delta","pck1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","gpd1delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","gms1delta","scd1delta","pka1delta"],"synonyms":[{"name":"growth 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id: PBO:0073311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small EDRK-rich factor 1A","termid":"PBO:0073311"}


id: FYPO:0001378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular calcium level","termid":"FYPO:0001198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"increased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"increased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"increased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001378"}


id: GO:0052722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fatty acid + O2 + 2 NADPH + H+ = fatty acid with in-chain hydroxy group + 2 NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-12186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fatty acid in-chain hydroxylase activity","secondary_identifiers":["RHEA:45084"],"termid":"GO:0052722"}


id: GO:0010321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vegetative phase change. Vegetative phase change is the set of post-embryonic processes involved in the transition of a plant from a juvenile phase of vegetative development to an adult phase of vegetative development.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"vegetative phase change","termid":"GO:0010050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vegetative phase change","termid":"GO:0010321"}


id: GO:0004344
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + acceptor = D-glucono-1,5-lactone + reduced acceptor.","definition_xrefs":["PMID:22027299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glucose dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.1.99.35","GO:0008708","RHEA:24540"],"synonyms":[{"name":"glucose dehydrogenase (acceptor) activity","type":"exact"},{"name":"soluble glucose dehydrogenase","type":"exact"}],"termid":"GO:0004344","terms_by_termid":{"GO:0047935":null}}


id: PBO:0053739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 964","termid":"PBO:0053739"}


id: PBO:0060749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B2 pseudogene 2","termid":"PBO:0060749"}


id: MONDO:0013413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the CNGB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"CNGB1-related retinopathy","termid":"MONDO:0800403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 45","secondary_identifiers":["DOID:0110402","OMIM:613767","UMLS:C3151066","GARD:15704","ICD10CM:H35.5","MEDGEN:462416"],"synonyms":[{"name":"CNGB1 retinitis pigmentosa","type":"exact"},{"name":"RP45","type":"exact"},{"name":"retinitis pigmentosa 45","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in CNGB1","type":"exact"},{"name":"retinitis pigmentosa type 45","type":"exact"}],"termid":"MONDO:0013413","xrefs":{"Monarch":{"xref_id":"0013413"}}}


id: PR:O60112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15C4.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Rab geranylgeranyltransferase C15C4.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.03","synonyms":[{"name":"Spom972h-SPBC15C4.03","type":"exact"}],"termid":"PR:O60112"}


id: GO:0097215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.","definition_xrefs":["GOC:yaf","PMID:20544854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysosomal membrane permeability","termid":"GO:0097213"},{"relation_name":"is_a","term_name":"negative regulation of membrane permeability","termid":"GO:1905709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of lysosomal membrane permeability","synonyms":[{"name":"negative regulation of lysosome membrane permeability","type":"exact"}],"termid":"GO:0097215"}


id: PR:O94677
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21506:SF0","PRO:DNx","OMA:SCHPO03602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.10c","secondary_identifiers":["UniProtKB:O94677"],"synonyms":[{"name":"COG complex subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COG6","type":"exact"},{"name":"component of oligomeric Golgi complex 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94677"}


id: MONDO:0019205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The association of amelogenesis imperfecta and a microscopically typical hair dysplasia has been found in several members of a family in two generations. Transmission is X-linked.","definition_xrefs":["Orphanet:79129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichodysplasia-amelogenesis imperfecta syndrome","secondary_identifiers":["GARD:18943","UMLS:C4304344","MEDGEN:930013"],"termid":"MONDO:0019205","xrefs":{"Monarch":{"xref_id":"0019205"}}}


id: PBO:0063411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 7","termid":"PBO:0063411"}


id: PBO:0090180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE binding protein Sly1","termid":"PBO:0090180"}


id: PBO:0030051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_anaphase_A","termid":"PBO:0030051"}


id: GO:0046394
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id: PBO:0035934
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id: PBO:0087788
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id: PATO:0000704
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id: PATO:0001580
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id: GO:0052826
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id: PBO:0080311
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id: GO:0007079
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id: MONDO:0100101
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id: GO:0018982
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id: MONDO:0021105
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id: PBO:0064694
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id: SO:0000089
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id: PBO:0081610
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id: GO:0042451
data:
  {"annotated_genes":["SJAG_06634","SJAG_03881","SJAG_00044","SJAG_01070","SJAG_00134","SJAG_01859","SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[118837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[71803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[68053,75328,62731,95706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any purine nucleoside, one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside anabolism","type":"exact"},{"name":"purine nucleoside biosynthesis","type":"exact"},{"name":"purine nucleoside formation","type":"exact"},{"name":"purine nucleoside synthesis","type":"exact"}],"termid":"GO:0042451","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046086":null}}


id: PBO:0052512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL25 pseudogene 1","termid":"PBO:0052512"}


id: FYECO:0000389
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with sulfate ions as the sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, sulfate sulfur source","synonyms":[{"name":"glucose MM, sulphate sulphur source","type":"exact"},{"name":"glucose minimal medium, sulfate sulfur source","type":"exact"},{"name":"glucose minimal medium, sulphate sulphur source","type":"exact"}],"termid":"FYECO:0000389"}


id: MONDO:1011976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Collie eye anomaly, non-human animal","secondary_identifiers":["OMIA:000218"],"termid":"MONDO:1011976","xrefs":{"Monarch":{"xref_id":"1011976"}}}


id: PBO:0080296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 60 pseudogene","termid":"PBO:0080296"}


id: PBO:0036006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_acetylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036006"}


id: GO:0010686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetracyclic triterpenoid compounds, terpenoids with six isoprene units and 4 carbon rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tetracyclic triterpenoid biosynthetic process","synonyms":[{"name":"tetracyclic triterpenoid biosynthesis","type":"exact"}],"termid":"GO:0010686"}


id: GO:0061652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of FAT10 from one protein to another via the reaction X-FAT10 + Y = Y-FAT10 + X, where both the X-FAT10 and Y-FAT10 linkages are thioester bonds between the C-terminal amino acid of FAT10 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAT10 transferase activity","termid":"GO:0019775"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0019787","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"FAT10 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061652"}


id: PBO:0056332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 13","termid":"PBO:0056332"}


id: PBO:0065621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 1","termid":"PBO:0065621"}


id: PBO:0075832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin","termid":"PBO:0075832"}


id: PBO:0088836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup82","termid":"PBO:0088836"}


id: PBO:0051531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 2 receptor subunit gamma","termid":"PBO:0051531"}


id: MONDO:0014203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAAF4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 25","secondary_identifiers":["GARD:15972","OMIM:615482","MEDGEN:815971","UMLS:C3809641","DOID:0110615"],"synonyms":[{"name":"CILD25","type":"exact"},{"name":"DNAAF4 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 25","type":"related"},{"name":"ciliary dyskinesia, primary, 25, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 25","type":"exact"},{"name":"primary ciliary dyskinesia 25 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAAF4","type":"exact"},{"name":"primary ciliary dyskinesia type 25","type":"exact"}],"termid":"MONDO:0014203","xrefs":{"Monarch":{"xref_id":"0014203"}}}


id: FYPO:0005230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to ultraviolet light is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:26493332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal regulation of translation in response to UV","synonyms":[{"name":"normal regulation of translation in response to UV during mitotic cell cycle","type":"related"},{"name":"normal regulation of translation in response to UV during vegetative growth","type":"exact"},{"name":"normal regulation of translation in response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005230"}


id: PBO:0046149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elaC ribonuclease Z 2","termid":"PBO:0046149"}


id: MONDO:0007611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Zimmermann-Laband syndrome (obsolete MONDO:0007611)","termid":"MONDO:0007611","xrefs":{"Monarch":{"xref_id":"0007611"}}}


id: MONDO:0009438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal hypouricemia","termid":"MONDO:0009071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypouricemia, hypercalcinuria, and decreased bone density","secondary_identifiers":["MESH:C565475","OMIM:242050","UMLS:C1855793","GARD:15186","MEDGEN:343419"],"synonyms":[{"name":"hypouricemia, hypercalcinuria, and decreased bone density","type":"exact"}],"termid":"MONDO:0009438","xrefs":{"Monarch":{"xref_id":"0009438"}}}


id: PBO:0051210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-59","termid":"PBO:0051210"}


id: PBO:0053305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN28A pseudogene 2","termid":"PBO:0053305"}


id: PBO:0004689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp10 (predicted)","termid":"PBO:0004689"}


id: GO:0004991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with parathyroid hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"parathyroid hormone receptor activity","termid":"GO:0004991"}


id: PBO:0061686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP153 antisense RNA 1","termid":"PBO:0061686"}


id: MOD:01710
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino- or imino-hydrogen with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent N-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01710"}


id: FYPO:0007922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cysteine  above normal physiological concentrations. Cells stop growing (and may die) at a concentration of cysteine that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to cysteine","synonyms":[{"name":"sensitive to cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0007922"}


id: GO:2000934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellotriose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellotriose metabolic process (obsolete GO:2000934)","synonyms":[{"name":"negative regulation of cellotriose metabolism","type":"exact"}],"termid":"GO:2000934"}


id: GO:0005476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carnitine (mitochondrial) + O-acyl-L-carnitine (cytoplasm) = carnitine (cytoplasm) + O-acyl-L-carnitine (mitochondrial).","definition_xrefs":["PMID:9032458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine transmembrane transporter activity","termid":"GO:0015226"},{"relation_name":"is_a","term_name":"O-acyl-L-carnitine transmembrane transporter activity","termid":"GO:0015227"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"carnitine:O-acyl-L-carnitine antiporter activity","secondary_identifiers":["Reactome:R-HSA-200424"],"synonyms":[{"name":"carnitine/acyl carnitine carrier activity","type":"exact"},{"name":"carnitine:acyl carnitine carrier activity","type":"exact"},{"name":"fatty acyl carnitine carrier","type":"exact"}],"termid":"GO:0005476"}


id: PBO:0083788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in rRNA maturation and ribosomal assembly; involved in the processing of pre-rRNA and the assembly of the 60S ribosomal subunit; interacts with ribosomal protein L11; localizes predominantly to the nucleolus; constituent of 66S pre-ribosomal particles","termid":"PBO:0083788"}


id: GO:0071484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light intensity stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to light intensity","termid":"GO:0071484"}


id: PBO:0113548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD-repeat protein involved in Ub-mediated proteolysis; K48-, K29-specific Ub chain binding protein involved in Ub homeostasis; substrate-recruiting adaptor for Cdc48p in mitochondria-associated degradation; inhibits degradation of Ufd2p-dependent substrates; facilitates proteolysis of Cse4p, a centromeric H3-like protein; required for ribophagy; promotes NHEJ in postdiauxic/stationary phase; protein increases in abundance and relocalizes from nucleus to nuclear periphery upon replication stress","termid":"PBO:0113548"}


id: PBO:0066372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 16","termid":"PBO:0066372"}


id: PBO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein Mam3","termid":"PBO:0001214"}


id: PBO:0072267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 5","termid":"PBO:0072267"}


id: GO:0034836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-hydroxy-2-mercaptobenzothiazole + 1/2 O2 = 6,7-dihydroxy-2-mercaptobenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1181"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy-2-mercaptobenzothiazole monooxygenase activity (obsolete GO:0034836)","termid":"GO:0034836"}


id: PBO:0036113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_glycosylation_during_vegetative_growth","termid":"PBO:0036113"}


id: PBO:0069933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1226, pseudogene","termid":"PBO:0069933"}


id: PATO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functionality quality which is held by the bearer when the latter is able to perform additional or different function(s).","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"having extra function","synonyms":[{"name":"having supernumerary functions","type":"exact"}],"termid":"PATO:0001559"}


id: PBO:0017579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate/ 5'-adenylyl sulfate transmembrane transporter (predicted)","termid":"PBO:0017579"}


id: PBO:0071665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 6","termid":"PBO:0071665"}


id: PBO:0069698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 977, pseudogene","termid":"PBO:0069698"}


id: PBO:0045907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 5","termid":"PBO:0045907"}


id: PBO:0070468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 3","termid":"PBO:0070468"}


id: GO:1902044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Fas signaling pathway.","definition_xrefs":["PMID:17245429","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"Fas signaling pathway","termid":"GO:0036337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Fas signaling pathway","synonyms":[{"name":"regulation of Apo-1 signaling pathway","type":"exact"},{"name":"regulation of CD95 signaling pathway","type":"exact"},{"name":"regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"regulation of Fas receptor signaling pathway","type":"exact"},{"name":"regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"regulation of FasL signaling pathway","type":"related"},{"name":"regulation of FasR signaling pathway","type":"exact"}],"termid":"GO:1902044"}


id: PR:Q9UUD4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug124 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 124 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.06c","synonyms":[{"name":"Spom972h-mug124","type":"exact"}],"termid":"PR:Q9UUD4"}


id: PBO:0029702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleoside_diphosphate_kinase_activity","termid":"PBO:0029702"}


id: MONDO:0019855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Athyreosis is a form of thyroid dysgenesis characterized by complete absence of thyroid tissue that results in primary congenital hypothyroidism, a permanent thyroid deficiency that is present from birth.","definition_xrefs":["Orphanet:95713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized resistance to thyroid hormone","termid":"MONDO:0009043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"athyreosis","secondary_identifiers":["MEDGEN:155447","UMLS:C0749420","NANDO:2200331","GARD:16842"],"termid":"MONDO:0019855","xrefs":{"Monarch":{"xref_id":"0019855"}}}


id: MONDO:0008550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thoracolaryngopelvic dysplasia (obsolete MONDO:0008550)","termid":"MONDO:0008550","xrefs":{"Monarch":{"xref_id":"0008550"}}}


id: MONDO:0018829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of schizencephaly that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizencephaly","termid":"MONDO:0010011"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"COL4A1-related disorder","termid":"MONDO:0800461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"familial schizencephaly","secondary_identifiers":["GARD:17876","MESH:C538514","Orphanet:481986","UMLS:C2931870","MEDGEN:419186"],"synonyms":[{"name":"familial schizencephaly","type":"exact"},{"name":"hereditary schizencephaly","type":"exact"}],"termid":"MONDO:0018829","xrefs":{"Monarch":{"xref_id":"0018829"}}}


id: PBO:0068971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 215, pseudogene","termid":"PBO:0068971"}


id: MONDO:0003765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from leptomeningeal melanocytes and occurs in adulthood.","definition_xrefs":["NCIT:C5319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leptomeningeal melanoma","termid":"MONDO:0003761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult leptomeningeal melanoma","secondary_identifiers":["MEDGEN:231042","DOID:6090","UMLS:C1332204"],"synonyms":[{"name":"adult leptomeningeal melanoma","type":"exact"},{"name":"adult meningeal melanoma","type":"exact"},{"name":"melanoma of adult leptomeninges","type":"exact"},{"name":"melanoma of the adult leptomeninges","type":"related"}],"termid":"MONDO:0003765","xrefs":{"Monarch":{"xref_id":"0003765"}}}


id: MONDO:0007827
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87186,87185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011577"}]},"cv_name":"mondo","definition":"A slowly progressive degenerative inflammatory disorder of skeletal muscles characterized by late onset weakness of specific muscles and distinctive histopathological features.","definition_xrefs":["Orphanet:611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"inclusion body myositis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200218","NORD:1734","EFO:0007323","ICD9:729.1","NANDO:1200032","NCIT:C84786","ICD9:359.71","SCTID:72315009","MedDRA:10066407","MEDGEN:68659","UMLS:C0238190","OMIM:147421","DOID:3429","GARD:3896","ICD10CM:G72.41","MESH:D018979"],"synonyms":[{"name":"IBM","type":"exact"},{"name":"Ibm","type":"related"},{"name":"Sporadic Inclusion Body Myositis","type":"exact"},{"name":"inclusion body myositis","type":"exact"},{"name":"inflammatory myopathy","type":"related"},{"name":"sIBM","type":"exact"},{"name":"sporadic inclusion body myositis","type":"exact"}],"termid":"MONDO:0007827","terms_by_termid":{"MONDO:0011577":null},"xrefs":{"Monarch":{"xref_id":"0007827"}}}


id: PBO:0052922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-5","termid":"PBO:0052922"}


id: MONDO:1012175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myasthenia, non-human animal","termid":"MONDO:1011849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myasthenia, dog","secondary_identifiers":["OMIA:000684-9615"],"termid":"MONDO:1012175","xrefs":{"Monarch":{"xref_id":"1012175"}}}


id: FYPO:0004675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing dimethyl sulfoxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on dimethyl sulfoxide","synonyms":[{"name":"normal cell population growth in presence of dimethyl sulfoxide","type":"exact"},{"name":"normal cell population growth on DMSO","type":"exact"},{"name":"normal cell population growth on dimethyl sulfoxide","type":"exact"},{"name":"normal cellular response to dimethyl sulfoxide","type":"related"},{"name":"normal growth on dimethyl sulphoxide","type":"exact"},{"name":"normal vegetative cell population growth on dimethyl sulfoxide","type":"exact"}],"termid":"FYPO:0004675"}


id: GO:0000310
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95711],"is_not":false,"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + XMP = 5-phospho-alpha-D-ribose 1-diphosphate + xanthine.","definition_xrefs":["RHEA:10800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine phosphoribosyltransferase activity","termid":"GO:0106130"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"xanthine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.2.22","MetaCyc:XANPRIBOSYLTRAN-RXN","GO:0009043"],"synonyms":[{"name":"5-phospho-alpha-D-ribose-1-diphosphate:xanthine phospho-D-ribosyltransferase activity","type":"related"},{"name":"XMP pyrophosphorylase activity","type":"related"},{"name":"XMP:diphosphate 5-phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"Xan phosphoribosyltransferase activity","type":"related"},{"name":"xanthine-guanine phosphoribosyltransferase activity","type":"exact"},{"name":"xanthosine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"xanthylate pyrophosphorylase activity","type":"related"},{"name":"xanthylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0000310","terms_by_termid":{"GO:0000310":null}}


id: PBO:0058342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4715","termid":"PBO:0058342"}


id: PBO:0086820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR085W and adjacent ORF YMR084W are merged in related strains, and together are paralogous to glutamine-fructose-6-phosphate amidotransferase GFA1","termid":"PBO:0086820"}


id: PBO:0048755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLYCTK antisense RNA 1","termid":"PBO:0048755"}


id: GO:0043921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism alters or subverts viral transcription.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host-mediated perturbation of viral process","termid":"GO:0044788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated perturbation of viral transcription","synonyms":[{"name":"modulation by host of viral transcription","type":"exact"},{"name":"regulation by host of viral transcription","type":"exact"},{"name":"regulation of viral transcription by host","type":"exact"}],"termid":"GO:0043921"}


id: FYPO:0005996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any ribosomal RNA (rRNA) primary transcript, rRNA precursor or processing intermediate, or mature rRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"altered rRNA or precursor level","synonyms":[{"name":"abnormal rRNA or precursor level","type":"exact"},{"name":"altered rRNA or precursor accumulation","type":"related"},{"name":"altered rRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered rRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered rRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005996"}


id: GO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a myeloid dendritic cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell cytokine production","termid":"GO:0002371"},{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}


id: PBO:0088440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf1","termid":"PBO:0088440"}


id: PBO:0034211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_intercellular_endoparasite","termid":"PBO:0034211"}


id: GO:0009581
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an external stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of external stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of external stimulus","type":"related"}],"termid":"GO:0009581","terms_by_termid":{"GO:0050982":null}}


id: MONDO:0031166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular dystrophy, retinal","secondary_identifiers":["DOID:0070438","OMIMPS:136550"],"termid":"MONDO:0031166","xrefs":{"Monarch":{"xref_id":"0031166"}}}


id: SO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multi-chromosome duplication aberration generated by reassortment of other aberration components.","definition_xrefs":["FB:gm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assortment_derived_variation","termid":"SO:0001504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_duplication","synonyms":[{"name":"assortment derived duplication","type":"exact"}],"termid":"SO:0000800"}


id: PBO:0079782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A3","termid":"PBO:0079782"}


id: PBO:0063813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 2","termid":"PBO:0063813"}


id: MONDO:0010973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the GSDME gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 5","secondary_identifiers":["MEDGEN:331398","MESH:C563410","GARD:18102","DOID:0110575","UMLS:C1832932","OMIM:600994"],"synonyms":[{"name":"DFNA5","type":"narrow"},{"name":"GSDME autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 5","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 5","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in GSDME","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 5","type":"narrow"},{"name":"deafness, autosomal dominant 5","type":"narrow"},{"name":"deafness, autosomal dominant type 5","type":"narrow"}],"termid":"MONDO:0010973","xrefs":{"Monarch":{"xref_id":"0010973"}}}


id: PBO:0080195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 3","termid":"PBO:0080195"}


id: MONDO:0005904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the pericardium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardium disorder","termid":"MONDO:0000474"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pericarditis","secondary_identifiers":["MESH:D010493","Orphanet:58208","icd11.foundation:1296696944","MEDGEN:18377","SCTID:3238004","UMLS:C0031046","HP:0001701","NCIT:C34915","EFO:0007427","DOID:1787"],"synonyms":[{"name":"inflammation of pericardium","type":"exact"},{"name":"pericarditis","type":"exact"},{"name":"pericarditis (disease)","type":"exact"},{"name":"pericardium inflammation","type":"exact"}],"termid":"MONDO:0005904","xrefs":{"Monarch":{"xref_id":"0005904"}}}


id: PBO:0063098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-6 family cell polarity regulator beta","termid":"PBO:0063098"}


id: PBO:0061075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor interacting Ras like 2","termid":"PBO:0061075"}


id: PBO:0043578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 2 chain","termid":"PBO:0043578"}


id: MONDO:0009735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Netherton syndrome (NS) is a skin disorder characterized by congenital ichthyosiform erythroderma (CIE), a distinctive hair shaft defect (trichorrhexis invaginata; TI) and atopic manifestations.","definition_xrefs":["Orphanet:634"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes structural anomaly (obsolete MONDO:0020189)","termid":"MONDO:0020189"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0005328","MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"Netherton syndrome","secondary_identifiers":["NORD:1290","GARD:7182","SCTID:312514006","MedDRA:10062909","UMLS:C5574950","NCIT:C84922","SCTID:54336006","OMIM:256500","MEDGEN:1802991","MESH:D056770","NANDO:2200993","NANDO:1200619","DOID:0050474","NANDO:1200338","icd11.foundation:1797493665"],"synonyms":[{"name":"Comel-Netherton syndrome","type":"related"},{"name":"Comèl-Netherton syndrome","type":"exact"},{"name":"Ichthyosis, Netherton Syndrome","type":"exact"},{"name":"NS","type":"exact"},{"name":"Netherton disease","type":"related"},{"name":"Netherton syndrome","type":"exact"},{"name":"bamboo hair syndrome","type":"exact"},{"name":"erythroderma, ichthyosiform, with hypotrichosis and hyper-IgE","type":"related"},{"name":"neth","type":"related"}],"termid":"MONDO:0009735","xrefs":{"Monarch":{"xref_id":"0009735"}}}


id: PBO:0043915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyocyte maturation associated lncRNA","termid":"PBO:0043915"}


id: PBO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Caf16 (predicted)","termid":"PBO:0002701"}


id: PR:O14277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01525","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.08","secondary_identifiers":["UniProtKB:O14277"],"synonyms":[{"name":"Spom972h-RPS5","type":"exact"}],"termid":"PR:O14277"}


id: GO:0160056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a macropinosome.","definition_xrefs":["PMID:19690049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"macropinosome","termid":"GO:0044354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005768","GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"macropinosome membrane","termid":"GO:0160056"}


id: GO:0008836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + H+ = L-lysine + CO2.","definition_xrefs":["EC:4.1.1.20","RHEA:15101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"diaminopimelate decarboxylase activity","secondary_identifiers":["MetaCyc:DIAMINOPIMDECARB-RXN","KEGG_REACTION:R00451"],"synonyms":[{"name":"DAP decarboxylase activity","type":"related"},{"name":"DAP-decarboxylase activity","type":"related"},{"name":"diaminopimelic acid decarboxylase activity","type":"related"},{"name":"meso-2,6-diaminoheptanedioate carboxy-lyase (L-lysine-forming)","type":"related"},{"name":"meso-2,6-diaminoheptanedioate carboxy-lyase activity","type":"related"},{"name":"meso-diaminopimelate decarboxylase activity","type":"related"}],"termid":"GO:0008836"}


id: MONDO:0971128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"multiple evanescent white dot syndrome","secondary_identifiers":["icd11.foundation:1817745681","Orphanet:674953","UMLS:C0730322","MEDGEN:676519"],"termid":"MONDO:0971128","xrefs":{"Monarch":{"xref_id":"0971128"}}}


id: GO:1900306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptasaccharide transport","termid":"GO:1900294"},{"relation_name":"regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of maltoheptaose transport","termid":"GO:1900306"}


id: GO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-alpha-D-glucosaminides.","definition_xrefs":["EC:3.2.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"alpha-N-acetylglucosaminidase activity","secondary_identifiers":["Reactome:R-HSA-1678742","Reactome:R-HSA-2263496","Reactome:R-HSA-9036052","MetaCyc:3.2.1.50-RXN","Reactome:R-HSA-2090038"],"synonyms":[{"name":"N-acetyl-alpha-D-glucosaminidase activity","type":"related"},{"name":"N-acetyl-alpha-glucosaminidase activity","type":"related"},{"name":"NAG activity","type":"related"},{"name":"alpha-D-2-acetamido-2-deoxyglucosidase activity","type":"related"},{"name":"alpha-N-acetyl-D-glucosaminide N-acetylglucosaminohydrolase activity","type":"related"},{"name":"alpha-acetylglucosaminidase activity","type":"related"}],"termid":"GO:0004561"}


id: GO:1905259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to nitrosative stress.","definition_xrefs":["PMID:14752510","GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1905258"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to nitrosative stress","termid":"GO:1990442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress","type":"exact"},{"name":"down regulation of nitrosative stress-induced apoptosis","type":"related"},{"name":"down regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress","type":"exact"},{"name":"down-regulation of nitrosative stress-induced apoptosis","type":"related"},{"name":"down-regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to nitrosative stress","type":"exact"},{"name":"downregulation of nitrosative stress-induced apoptosis","type":"related"},{"name":"downregulation of nitrosative stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to nitrosative stress","type":"narrow"},{"name":"inhibition of nitrosative stress-induced apoptosis","type":"related"},{"name":"inhibition of nitrosative stress-induced intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress","type":"exact"},{"name":"negative regulation of nitrosative stress-induced apoptosis","type":"related"}],"termid":"GO:1905259"}


id: GO:0035570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal serine of proteins.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}


id: MONDO:0013802
data:
  {"annotated_genes":["SJAG_01630","SJAG_03588"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88365,88366],"is_not":false,"summary":null,"term":"MONDO:0013802"}]},"cv_name":"mondo","definition":"Infantile cerebellar retinal degeneration (ICRD) is a genetic condition present from birth (congenital) that involves the brain and eyes. Individuals with this condition usually develop symptoms around six months of age including developmental delays, low muscle tone (hypotonia), and seizures. Other symptoms may include head bobbing, abnormal muscle twitching and movement, and loss of brain cells in the main part of the brain called the cerebellum. Eye findings in individuals with this condition may include retinal degeneration (weakening of the layer of tissue in the back of the eye that senses light), strabismus (crossed eyes), and nystagmus (fast, uncontrollable movements of the eyes). ICRD is caused by mutations in the ACO2 gene and is inherited in an autosomal recessive manner. While there is still no cure for this condition, treatment options will depend on the type and severity of symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle disorder","termid":"MONDO:0016790"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"infantile cerebellar-retinal degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:482822","DOID:0050883","GARD:13264","UMLS:C3281192","OMIM:614559","Orphanet:313850"],"synonyms":[{"name":"ICRD","type":"related"},{"name":"infantile cerebellar retinal degeneration","type":"related"},{"name":"infantile cerebellar-retinal degeneration","type":"exact"}],"termid":"MONDO:0013802","terms_by_termid":{"MONDO:0013802":null},"xrefs":{"Monarch":{"xref_id":"0013802"}}}


id: MONDO:0014515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular dystrophy with central cone involvement","secondary_identifiers":["UMLS:C4015371","OMIM:616170","MEDGEN:863808"],"synonyms":[{"name":"CCMD","type":"related"},{"name":"macular dystrophy with central cone involvement","type":"exact"}],"termid":"MONDO:0014515","xrefs":{"Monarch":{"xref_id":"0014515"}}}


id: PBO:0086848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative redox protein containing a thioredoxin fold; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086848"}


id: PBO:0054607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2012","termid":"PBO:0054607"}


id: GO:0014855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.","definition_xrefs":["GOC:ef","CL:0000737","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell proliferation","termid":"GO:0033002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell proliferation","termid":"GO:0014855"}


id: GO:0000792
data:
  {"annotated_genes":["SJAG_03350","SJAG_04186","SJAG_05247","SJAG_05329","SJAG_02866","SJAG_03042","SJAG_04252","SJAG_04062","SJAG_03916","SJAG_00678","SJAG_04039","SJAG_03789","SJAG_01056","SJAG_00768","SJAG_02622","SJAG_03982","SJAG_02299","SJAG_03449","SJAG_03844","SJAG_02698","SJAG_00796","SJAG_03221","SJAG_04257","SJAG_03664","SJAG_03193","SJAG_01601","SJAG_02621","SJAG_01867","SJAG_03418","SJAG_00471","SJAG_02725","SJAG_04142","SJAG_02348","SJAG_03635","SJAG_02846","SJAG_00302","SJAG_01708","SJAG_00414","SJAG_01062","SJAG_02082","SJAG_00618","SJAG_02119","SJAG_00961","SJAG_00335","SJAG_04623","SJAG_03346","SJAG_04412","SJAG_04396","SJAG_03680","SJAG_02401","SJAG_00266","SJAG_04508","SJAG_01067","SJAG_01495","SJAG_01332","SJAG_00698","SJAG_04670","SJAG_03780","SJAG_03627","SJAG_03543","SJAG_03926","SJAG_02990","SJAG_03689","SJAG_03989","SJAG_01075","SJAG_04855","SJAG_01046","SJAG_01873","SJAG_00934","SJAG_05372","SJAG_04253","SJAG_01579","SJAG_00664","SJAG_03942","SJAG_04574","SJAG_03685","SJAG_04030","SJAG_02927","SJAG_03745","SJAG_04768","SJAG_01581","SJAG_03356","SJAG_04141","SJAG_01540","SJAG_02778","SJAG_01745","SJAG_02409","SJAG_02382","SJAG_00756","SJAG_02773","SJAG_03945","SJAG_02697","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90726,91017,95145,96550,98156,99156,101448,103456,106064,107340,109942,112198,116534,116566,119187,121603],"is_not":false,"summary":null,"term":"GO:0000792"},{"annotations":[121608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990343"},{"annotations":[101061,94181,118856,120116,92734,119751,93811,93212,98189,120830,95385,89425,115278,120096,114092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990342"},{"annotations":[115279,115977,92862,64798,96021,114590,106039,119752,114093,62523,111943,95657,109626,73547,95775,74299,89809,117418,110129,106135,61473,102083,115044,120097,114199,119696,112280,101062,114589,116416,112468,89872,120573,101508,61699,98107,98673,119980,93213,119123,120831,98933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031934"},{"annotations":[91306,100911,114096,92865,117979,101558,108512,93286,93215,113200,61475,98109,120711,91993,93354,110131,89588,98675,108267,114602,118860,115979,62525,119698,120833,103792,96039,116279,119754,106138,109792,115666,112470,115281,104731,117421,95777,89812,102085,94323,114201,109299,95658,64800,120575,115046,119983,61701,106041,113871,116562,115219,114601,116418,94019,120098,119125,101064,101511,111672,96023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005721"},{"annotations":[108268,73548,104224,118523,118861,120834,114097,62524,115282,115980,106139,114506,116419,93815,110132,91994,93287,113208,61700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033553"},{"annotations":[93216,114202,120099],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030958"},{"annotations":[120100,95778,92866,94022,106042,114099,115284,98676,120835,96024,112471,64796,115981,106141,101065,114605,119126,61471,98110,114203,101512,117939,119699,93217,114604,119755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140720"}]},"cv_name":"cellular_component","definition":"A compact and highly condensed form of chromatin that is refractory to transcription.","definition_xrefs":["PMID:32017156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":93,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00414":null,"SJAG_00471":null,"SJAG_00618":null,"SJAG_00664":null,"SJAG_00678":null,"SJAG_00698":null,"SJAG_00756":null,"SJAG_00768":null,"SJAG_00796":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_01046":null,"SJAG_01056":null,"SJAG_01062":null,"SJAG_01067":null,"SJAG_01075":null,"SJAG_01332":null,"SJAG_01495":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01581":null,"SJAG_01601":null,"SJAG_01708":null,"SJAG_01745":null,"SJAG_01867":null,"SJAG_01873":null,"SJAG_02082":null,"SJAG_02119":null,"SJAG_02299":null,"SJAG_02348":null,"SJAG_02382":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02697":null,"SJAG_02698":null,"SJAG_02725":null,"SJAG_02773":null,"SJAG_02778":null,"SJAG_02846":null,"SJAG_02866":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03221":null,"SJAG_03346":null,"SJAG_03350":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03449":null,"SJAG_03543":null,"SJAG_03627":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_03689":null,"SJAG_03745":null,"SJAG_03780":null,"SJAG_03789":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03989":null,"SJAG_03997":null,"SJAG_04030":null,"SJAG_04039":null,"SJAG_04062":null,"SJAG_04141":null,"SJAG_04142":null,"SJAG_04186":null,"SJAG_04252":null,"SJAG_04253":null,"SJAG_04257":null,"SJAG_04396":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04574":null,"SJAG_04623":null,"SJAG_04670":null,"SJAG_04768":null,"SJAG_04855":null,"SJAG_05247":null,"SJAG_05329":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"heterochromatin","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:32109380":null},"secondary_identifiers":["GO:0005720","Wikipedia:Heterochromatin","GO:0035328","NIF_Subcellular:sao581845896"],"synonyms":[{"name":"nuclear heterochromatin","type":"narrow"},{"name":"transcriptionally inactive chromatin","type":"exact"},{"name":"transcriptionally silent chromatin","type":"exact"}],"termid":"GO:0000792","terms_by_termid":{"GO:0000792":null,"GO:0005721":null,"GO:0030958":null,"GO:0031934":null,"GO:0033553":null,"GO:0140720":null,"GO:1990342":null,"GO:1990343":null}}


id: GO:0052834
data:
  {"annotated_genes":["SJAG_03739"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008934"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol phosphate + H2O = myo-inositol + phosphate.","definition_xrefs":["EC:3.1.3.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol monophosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:24056","MetaCyc:RXN-10949"],"synonyms":[{"name":"L-myo-inositol-phosphate phosphatase activity","type":"related"},{"name":"inositol phosphatase activity","type":"related"},{"name":"inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"inositol-phosphate phosphatase activity","type":"related"},{"name":"myo-inositol monophosphatase activity","type":"related"},{"name":"myo-inositol phosphatase activity","type":"related"},{"name":"myo-inositol-1(or 4)-phosphate phosphohydrolase activity","type":"broad"},{"name":"myo-inositol-phosphatase activity","type":"related"},{"name":"myo-inositol-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0052834","terms_by_termid":{"GO:0008934":null}}


id: PBO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RNF family homolog","termid":"PBO:0001019"}


id: FYPO:0004628
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of premeiotic DNA replication","synonyms":[{"name":"delayed premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0004628"}


id: PBO:0054423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1819","termid":"PBO:0054423"}


id: PBO:0044122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 8","termid":"PBO:0044122"}


id: PBO:0089888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon fragment","termid":"PBO:0089888"}


id: PBO:0065178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein only RNase P catalytic subunit","termid":"PBO:0065178"}


id: GO:0102646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 14betaH-scalarane-17alpha-19-diol = all-trans-geranylfarnesol + H2O.","definition_xrefs":["GOC:pz","PMID:24200803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"14betaH-scalarane-17alpha-19-diol synthase activity","secondary_identifiers":["MetaCyc:RXN-15759"],"termid":"GO:0102646"}


id: MONDO:0014479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disseminated superficial actinic porokeratosis","termid":"MONDO:0019212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 8, disseminated superficial actinic type","secondary_identifiers":["GARD:16056","UMLS:C4015128","MEDGEN:863565","OMIM:616063"],"synonyms":[{"name":"POROK8","type":"related"},{"name":"porokeratosis 8, disseminated superficial actinic type","type":"exact"}],"termid":"MONDO:0014479","xrefs":{"Monarch":{"xref_id":"0014479"}}}


id: FYPO:0005330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-free translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-free translesion synthesis","termid":"FYPO:0005323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"decreased error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"decreased error-free translesion synthesis across TT-(6-4)","type":"exact"},{"name":"decreased error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"decreased error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005330"}


id: PBO:0069102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 349, pseudogene","termid":"PBO:0069102"}


id: MONDO:0018558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with wooly hair (obsolete MONDO:0018558)","secondary_identifiers":["Orphanet:434809"],"termid":"MONDO:0018558","xrefs":{"Monarch":{"xref_id":"0018558"}}}


id: FYPO:0002003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene. An RNA polymerase II proximal promoter is a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.","definition_xrefs":["PomBase:mah","GO:0000978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding","synonyms":[{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding abolished","type":"exact"},{"name":"abolished transcription factor binding to promoter region","type":"related"}],"termid":"FYPO:0002003"}


id: GO:0002849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peripheral T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"regulates","term_name":"peripheral T cell tolerance induction","termid":"GO:0002458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peripheral T cell tolerance induction","termid":"GO:0002849"}


id: GO:0045639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myeloid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"positively_regulates","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid cell differentiation","synonyms":[{"name":"activation of myeloid cell differentiation","type":"narrow"},{"name":"stimulation of myeloid cell differentiation","type":"narrow"},{"name":"up regulation of myeloid cell differentiation","type":"exact"},{"name":"up-regulation of myeloid cell differentiation","type":"exact"},{"name":"upregulation of myeloid cell differentiation","type":"exact"}],"termid":"GO:0045639"}


id: PBO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor B","termid":"PBO:0001446"}


id: PBO:0077468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 187","termid":"PBO:0077468"}


id: PBO:0076292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syncoilin, intermediate filament protein","termid":"PBO:0076292"}


id: PBO:0012047
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ris Related Protein 2","termid":"PBO:0012047"}


id: MONDO:0020352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple system atrophy, parkinsonian type (MSA-p) is a form of multiple system atrophy (MSA) with predominant parkinsonian features (bradykinesia, rigidity, irregular jerky postural tremor, and postural instability).","definition_xrefs":["Orphanet:98933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"multiple system atrophy, parkinsonian type","secondary_identifiers":["UMLS:C5554235","GARD:19604","ICD10CM:G23.2","icd11.foundation:296753000","MEDGEN:1842393","NANDO:1200036"],"synonyms":[{"name":"MSA, parkinsonian type","type":"exact"},{"name":"MSA-p","type":"exact"}],"termid":"MONDO:0020352","xrefs":{"Monarch":{"xref_id":"0020352"}}}


id: PBO:0035737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_extent_and_duration_of_protein-protein_interaction","termid":"PBO:0035737"}


id: PBO:0075594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spire type actin nucleation factor 1","termid":"PBO:0075594"}


id: MOD:00330
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to a (phospho-5'-guanosine)-L-histidine.","definition_xrefs":["PubMed:7559521","PubMed:10529169","PubMed:10869342","Unimod:413#H","RESID:AA0325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"guanylated residue","termid":"MOD:01163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(phospho-5'-guanosine)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(1-(5'-adenosine phosphono)imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-guanosine)-L-histidine","type":"exact"},{"name":"ACT_SITE GMP-histidine intermediate","type":"exact"},{"name":"L-histidine 5'-guanosine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-guanylic acid","type":"exact"},{"name":"N(tau)-5'-guanylic-L-histidine","type":"exact"},{"name":"N1'-guanylylated histidine","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"phospho-guanosine","type":"related"},{"name":"tele-5'-guanylic-L-histidine","type":"exact"}],"termid":"MOD:00330"}


id: PBO:0034383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-connects","termid":"PBO:0034383"}


id: PBO:0117432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 23","termid":"PBO:0117432"}


id: PBO:0029895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_vegetative_cell","termid":"PBO:0029895"}


id: GO:0044058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of digestive system process","termid":"GO:0044058"}


id: FYECO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the duration or frequency of one or more steps in a protocol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping growth timing","termid":"FYECO:0000122"}


id: PBO:0058071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4290","termid":"PBO:0058071"}


id: PBO:0066727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 24","termid":"PBO:0066727"}


id: PBO:0042328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD48 molecule","termid":"PBO:0042328"}


id: PBO:0041984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 28A","termid":"PBO:0041984"}


id: PBO:0016966
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin Like Protein","termid":"PBO:0016966"}


id: PBO:0113534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein involved in sterol trafficking with Npc2p; conformational changes drive sterol translocation across the glycocalyx and into the vacuolar membrane; involved in sphingolipid metabolism; cells lacking Ncr1p exhibit high levels of long chain bases (LCBs), similar to accumulation of lipids observed in patients with Neimann-Pick C disease due to loss-of-function mutations in human NPC1; transits through the vacuolar protein sorting pathway via the AP-3 pathway","termid":"PBO:0113534"}


id: PBO:0108562
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1 And Mei2-associated RNA","termid":"PBO:0108562"}


id: FYPO:0007540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the tyrosine residue at position 1 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30282034","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain tyrosine 1 residues during vegetative growth","synonyms":[{"name":"normal phosphorylation of RNA polymerase II C-terminal domain tyrosine 1 residues during mitotic cell cycle","type":"related"},{"name":"normal phosphorylation of RNA polymerase II CTD tyrosine 1 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0007540"}


id: FYPO:0007381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the protein Ssb1 accumulates in a large focus, or occasionally two foci, in the nucleus.","definition_xrefs":["PomBase:mah","PMID:26246602","PMID:32341083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"Ssb1 megafocus present","synonyms":[{"name":"RPA megafocus present","type":"exact"},{"name":"Ssb1 megafocus present during mitotic cell cycle","type":"related"},{"name":"Ssb1 megafocus present during vegetative growth","type":"exact"},{"name":"single enlarged Ssb1 focus present","type":"related"}],"termid":"FYPO:0007381"}


id: PBO:0042907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 4","termid":"PBO:0042907"}


id: PBO:0044992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diablo IAP-binding mitochondrial protein","termid":"PBO:0044992"}


id: MONDO:1010575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, domestic cat","secondary_identifiers":["OMIA:000279-9685"],"termid":"MONDO:1010575","xrefs":{"Monarch":{"xref_id":"1010575"}}}


id: GO:0031442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA 3'-end processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-end processing","termid":"GO:0031440"},{"relation_name":"is_a","term_name":"positive regulation of mRNA processing","termid":"GO:0050685"},{"relation_name":"positively_regulates","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA 3'-end processing","synonyms":[{"name":"activation of mRNA 3'-end processing","type":"narrow"},{"name":"stimulation of mRNA 3'-end processing","type":"narrow"},{"name":"up regulation of mRNA 3'-end processing","type":"exact"},{"name":"up-regulation of mRNA 3'-end processing","type":"exact"},{"name":"upregulation of mRNA 3'-end processing","type":"exact"}],"termid":"GO:0031442"}


id: GO:1903588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis.","definition_xrefs":["PMID:23388056","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell proliferation","termid":"GO:0001937"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:1903587"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"down regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"down regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"down-regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"down-regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"downregulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"downregulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"inhibition of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"inhibition of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"narrow"},{"name":"negative regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"}],"termid":"GO:1903588"}


