# terms

id: PBO:0053974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1285","termid":"PBO:0053974"}


id: PBO:0065339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prune exopolyphosphatase 1","termid":"PBO:0065339"}


id: PBO:0091980
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase Required for RNAi-mediated heterochromatin assembly","termid":"PBO:0091980"}


id: MOD:00817
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan.","definition_xrefs":["PubMed:16407988","ChEBI:35304","PubMed:8168130","RESID:AA0408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"isoprenylated tryptophan","termid":"MOD:01115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","synonyms":[{"name":"(2S,3R)-3-geranyl-2,3-dihydro-2,N(alpha)-cyclo-L-tryptophan","type":"exact"},{"name":"(2S,3aR,8aS)-3a-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-1,2,3,3a,8,8a-hexahydropyrrolo[2,3-b]indole-2-carboxylic acid","type":"exact"},{"name":"3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","type":"exact"},{"name":"3'Ger2'N2cycTrp","type":"exact"},{"name":"LIPID 3'-geranyl-2',N2-cyclotryptophan","type":"exact"}],"termid":"MOD:00817"}


id: FYPO:0001830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on gluconate carbon source","synonyms":[{"name":"decreased growth on gluconate carbon source","type":"broad"},{"name":"decreased vegetative cell growth on gluconate carbon source","type":"exact"},{"name":"reduced cell growth on gluconate carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0001830"}


id: PBO:0109103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 41, pseudogene","termid":"PBO:0109103"}


id: PR:Q9P6I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.10c","secondary_identifiers":["UniProtKB:Q9P6I0"],"synonyms":[{"name":"AsnRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NARS2","type":"exact"},{"name":"asparaginyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I0"}


id: MONDO:0030697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 28, autosomal recessive","secondary_identifiers":["OMIM:619781","UMLS:C5676935","MEDGEN:1806812"],"synonyms":[{"name":"MYP28","type":"exact"},{"name":"myopia 28, autosomal recessive","type":"exact"}],"termid":"MONDO:0030697","xrefs":{"Monarch":{"xref_id":"0030697"}}}


id: MONDO:1011352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radiation-induced disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation-induced disorder, non-human animal","termid":"MONDO:1011352","xrefs":{"Monarch":{"xref_id":"1011352"}}}


id: PBO:0025440
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylcytidine at positions 1297 & 1815","termid":"PBO:0025440"}


id: GO:0000256
data:
  {"annotated_genes":["SJAG_05287","SJAG_00035"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63310,77166],"is_not":false,"summary":null,"term":"GO:0000256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin metabolic process","termid":"GO:0000255"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"allantoin breakdown","type":"exact"},{"name":"allantoin catabolism","type":"exact"},{"name":"allantoin degradation","type":"exact"}],"termid":"GO:0000256","terms_by_termid":{"GO:0000256":null}}


id: PBO:0071876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 14","termid":"PBO:0071876"}


id: GO:0061067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"is_a","term_name":"regulation of dauer larval development","termid":"GO:0061065"},{"relation_name":"negatively_regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dauer larval development","termid":"GO:0061067"}


id: GO:0140968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of various organic cations in exchange for a proton, according to the reaction: H+(out) + organic cation(in) = H+(in) + organic cation(out). The transported substrates are usually toxic molecules, drugs and xenobiotics.","definition_xrefs":["PMID:17509534","PMID:17047166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"polyspecific organic cation:proton antiporter activity","secondary_identifiers":["TC:2.A.66.1.20"],"synonyms":[{"name":"proton:polyspecific organic cation antiporter activity","type":"related"}],"termid":"GO:0140968"}


id: PBO:0045247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C27","termid":"PBO:0045247"}


id: PR:O14104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys12 gene.","definition_xrefs":["UniProtKB:O14104","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoisocitrate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.04","synonyms":[{"name":"HICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys12","type":"exact"}],"termid":"PR:O14104"}


id: GO:0018731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-oxa-2-oxocycloheptane + H2O = 6-hydroxyhexanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-oxa-2-oxocycloheptane lactonase activity (obsolete GO:0018731)","termid":"GO:0018731"}


id: PR:O14254
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NADP], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11822:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NADP], mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.08","secondary_identifiers":["UniProtKB:O14254"],"synonyms":[{"name":"IDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IDP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC6G10.08","type":"related"},{"name":"Spom972h-IDH2nadp","type":"exact"},{"name":"oxalosuccinate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14254"}


id: PBO:0046635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 16","termid":"PBO:0046635"}


id: MONDO:0003974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant triton tumor (obsolete MONDO:0003974)","termid":"MONDO:0003974","xrefs":{"Monarch":{"xref_id":"0003974"}}}


id: GO:0005765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole membrane","termid":"GO:0098852"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lysosomal membrane","synonyms":[{"name":"lysosome membrane","type":"exact"}],"termid":"GO:0005765"}


id: FYPO:0001802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to caffeine (obsolete FYPO:0001802)","synonyms":[{"name":"elongated cell during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"elongated in response to caffeine","type":"exact"}],"termid":"FYPO:0001802"}


id: PBO:0025526
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HSP104","termid":"PBO:0025526"}


id: GO:0044498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:19837656"],"gene_count":0,"genotype_count":0,"name":"obsolete venom-mediated perturbation of blood pressure in another organism (obsolete GO:0044498)","synonyms":[{"name":"envenomation resulting in modulation of blood pressure in another organism","type":"exact"},{"name":"envenomation resulting in modulation of blood pressure in other organism","type":"exact"},{"name":"envenomation resulting in regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044498"}


id: PBO:0081449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 317","termid":"PBO:0081449"}


id: FYPO:0007991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize valine, and therefore requires leucine in the medium for vegetative cell growth.","definition_xrefs":["PMID:35325114","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for valine","synonyms":[{"name":"growth auxotrophic for valine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for valine during vegetative growth","type":"exact"},{"name":"valine auxotrophy","type":"exact"}],"termid":"FYPO:0007991"}


id: GO:0071328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a maltose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to maltose","termid":"GO:0034286"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to maltose stimulus","termid":"GO:0071328"}


id: MONDO:0008080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"schwannomatosis","termid":"MONDO:0008075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"neurofibromatosis, type III, mixed central and peripheral","secondary_identifiers":["OMIM:162260","UMLS:C2931480","MESH:C537389","GARD:15094","MEDGEN:419422","SCTID:254240003"],"synonyms":[{"name":"NF3A","type":"related"},{"name":"Nf 3","type":"related"},{"name":"neurofibromas, palmar cutaneous","type":"related"},{"name":"neurofibromatosis, type III, Riccardi type","type":"related"},{"name":"neurofibromatosis, type III, mixed central and peripheral","type":"exact"},{"name":"neurofibromatosis, type III, of Riccardi","type":"related"}],"termid":"MONDO:0008080","xrefs":{"Monarch":{"xref_id":"0008080"}}}


id: PR:P78860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA methyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03720","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.15c","secondary_identifiers":["UniProtKB:P78860"],"synonyms":[{"name":"21S rRNA (uridine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ2","type":"exact"}],"termid":"PR:P78860"}


id: GO:0120519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-methionyl-[tubulin] = CoA + H+ + N-terminal N(alpha)-acetyl-L-methionyl-[tubulin]. The N-terminus of both alpha- and beta-tubulin are acetylated.","definition_xrefs":["RHEA:69607","EC:2.3.1.308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N-terminal amino-acid acetyltransferase activity","termid":"GO:0004596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0034212","GO:0016746","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"tubulin N-terminal-methionine acetyltransferase activity","secondary_identifiers":["MetaCyc:RXN-22633","KEGG_REACTION:R12978"],"synonyms":[{"name":"tubulin N-terminal N-acetyltransferase activity","type":"exact"}],"termid":"GO:0120519"}


id: MONDO:0859342
data:
  {"annotated_genes":["SJAG_01082","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87522,87523],"is_not":false,"summary":null,"term":"MONDO:0859342"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 30, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620183","DOID:0051041","MEDGEN:1824053","UMLS:C5774280"],"termid":"MONDO:0859342","terms_by_termid":{"MONDO:0859342":null},"xrefs":{"Monarch":{"xref_id":"0859342"}}}


id: PBO:0087864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of oleate genes; regulates genes involved in fatty acid utilization; zinc cluster protein; deletion confers sensitivity to Calcufluor white, and prevents growth on glycerol or lactate as sole carbon source","termid":"PBO:0087864"}


id: GO:0033909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,2-alpha-L-fucoside linkages in fucoidan without release of sulfate.","definition_xrefs":["PMID:6417453","PMID:11910806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"fucoidanase activity","secondary_identifiers":["EC:3.2.1.211","MetaCyc:RXN-20949"],"synonyms":[{"name":"poly(1,2-alpha-L-fucoside-4-sulfate) glycanohydrolase activity","type":"related"}],"termid":"GO:0033909"}


id: PBO:0027295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell","termid":"PBO:0027295"}


id: PBO:0013759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase Tit1","termid":"PBO:0013759"}


id: MONDO:0012973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 12q15.","definition_xrefs":["PMID:19122664","DOID:0110901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 26","secondary_identifiers":["MEDGEN:382561","OMIM:612639","UMLS:C2675249","MESH:C567217"],"synonyms":[{"name":"IBD26","type":"exact"},{"name":"inflammatory bowel disease 26","type":"exact"},{"name":"inflammatory bowel disease type 26","type":"exact"}],"termid":"MONDO:0012973","xrefs":{"Monarch":{"xref_id":"0012973"}}}


id: GO:0140847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that stops, prevents or reduces the transition from the initiation to the elongation phases of transcription by RNA polymerase II.","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of promoter clearance from RNA polymerase II promoter","termid":"GO:0140845"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"negatively_regulates","term_name":"RNA polymerase II promoter clearance","termid":"GO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of promoter clearance from RNA polymerase II promoter","termid":"GO:0140847"}


id: GO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The narrow gap that separates the presynaptic and postsynaptic membranes, into which neurotransmitter is released.","definition_xrefs":["GOC:jl","PMID:30784960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"synaptic cleft","secondary_identifiers":["NIF_Subcellular:sao243541954"],"termid":"GO:0043083"}


id: FYPO:0003144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to methyl methanesulfonate is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal protein level during cellular response to MMS","type":"exact"},{"name":"normal protein level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal protein level during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0003144"}


id: FYPO:0008315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial ribosome assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrial ribosome assembly","termid":"FYPO:0008315"}


id: MONDO:0002561
data:
  {"annotated_genes":["SJAG_02518","SJAG_05182","SJAG_00158","SJAG_04323","SJAG_04295","SJAG_02056","SJAG_02068","SJAG_05175","SJAG_02716","SJAG_02949","SJAG_04706","SJAG_04790","SJAG_01868","SJAG_00570","SJAG_02131","SJAG_01407","SJAG_04819","SJAG_03052","SJAG_02139","SJAG_03824"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012221"},{"annotations":[87091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012222"},{"annotations":[88352,88353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[87251,87249,87250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[86908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[88525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010526"},{"annotations":[87295,87292,87296,87294,87293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010027"},{"annotations":[87389,87390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009737"},{"annotations":[87144,87143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"},{"annotations":[87746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009744"},{"annotations":[87757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"},{"annotations":[88852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[88121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[88114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[87277,87278,87280,87281,87279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011449"},{"annotations":[87506,87507,87508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","definition":"A metabolic disorder caused by mutations in proteins critical for lysosomal function, including lysosomal enzymes, lysosomal integral membrane proteins, and proteins involved in the post-translational modification and trafficking of lysosomal proteins.","definition_xrefs":["PMID:21723623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00570":null,"SJAG_01407":null,"SJAG_01868":null,"SJAG_02056":null,"SJAG_02068":null,"SJAG_02131":null,"SJAG_02139":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_02949":null,"SJAG_03052":null,"SJAG_03824":null,"SJAG_04295":null,"SJAG_04323":null,"SJAG_04706":null,"SJAG_04790":null,"SJAG_04819":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"lysosomal storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200055","NANDO:2100165","Orphanet:68366","NCIT:C61250","DOID:3211","SCTID:23585005","SCTID:28821000119102","UMLS:C0085078","GARD:18884","MESH:D016464","icd11.foundation:656131403","MEDGEN:43098"],"synonyms":[{"name":"disorder of lysosomal enzyme","type":"exact"},{"name":"disorder of lysosomal enzymes","type":"exact"},{"name":"inborn lysosomal enzyme disorder","type":"exact"},{"name":"lysosomal disease","type":"exact"},{"name":"lysosomal disorder","type":"exact"},{"name":"lysosomal storage disorder","type":"exact"},{"name":"lysosomal storage metabolism disorder","type":"exact"},{"name":"lysosome disease","type":"exact"},{"name":"lysosome disorder","type":"exact"},{"name":"phospholipidosis","type":"related"}],"termid":"MONDO:0002561","terms_by_termid":{"MONDO:0008083":null,"MONDO:0008767":null,"MONDO:0009290":null,"MONDO:0009737":null,"MONDO:0009744":null,"MONDO:0009756":null,"MONDO:0010027":null,"MONDO:0010155":null,"MONDO:0010526":null,"MONDO:0011449":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0012221":null,"MONDO:0012222":null,"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0002561"}}}


id: PBO:0071297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 20","termid":"PBO:0071297"}


id: PBO:0076988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 5 pseudogene 1","termid":"PBO:0076988"}


id: GO:0180060
data:
  {"annotated_genes":["SJAG_02834","SJAG_03667","SJAG_02735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63112,62785,71209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A process in which iron siderophores (low-molecular-weight, high-affinity iron-chelating compounds) are exported to scavenge iron and the iron-loaded siderophores imported back into the cell by transmembrane transport or endocytosis.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_03667":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"siderophore-dependent iron import pathway","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0180060","terms_by_termid":{"GO:0033214":null}}


id: GO:1903599
data:
  {"annotated_genes":["SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70719],"is_not":false,"summary":null,"term":"GO:1903599"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrion degradation by autophagy.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:autophagy","GOC:PARL","GOC:TermGenie","PMID:21753002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion","termid":"GO:1903146"},{"relation_name":"positively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagy of mitochondrion","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of mitochondrion degradation","type":"related"},{"name":"activation of mitophagy","type":"narrow"},{"name":"positive regulation of mitochondrial degradation","type":"broad"},{"name":"up regulation of mitochondrion degradation","type":"broad"},{"name":"up regulation of mitophagy","type":"exact"},{"name":"up-regulation of mitochondrion degradation","type":"broad"},{"name":"up-regulation of mitophagy","type":"exact"},{"name":"upregulation of mitochondrion degradation","type":"broad"},{"name":"upregulation of mitophagy","type":"exact"}],"termid":"GO:1903599","terms_by_termid":{"GO:1903599":null}}


id: MONDO:0044316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, anemia, and myelofibrosis","secondary_identifiers":["MEDGEN:1378448","UMLS:C4479504","OMIM:617441"],"synonyms":[{"name":"THAMY","type":"related"},{"name":"thrombocytopenia, anemia, and myelofibrosis","type":"exact"}],"termid":"MONDO:0044316","xrefs":{"Monarch":{"xref_id":"0044316"}}}


id: GO:0005915
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells.","definition_xrefs":["ISBN:0815316208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"zonula adherens","secondary_identifiers":["NIF_Subcellular:sao1400623473"],"synonyms":[{"name":"adhesion belt","type":"exact"},{"name":"belt desmosome","type":"exact"},{"name":"intermediate junction","type":"exact"},{"name":"zonula adhaerens","type":"exact"}],"termid":"GO:0005915"}


id: GO:0061102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the stomach epithelium.","definition_xrefs":["PMID:18173746","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"stomach development","termid":"GO:0062094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach neuroendocrine cell differentiation","synonyms":[{"name":"gastric neuroendocrine cell differentiation","type":"related"}],"termid":"GO:0061102"}


id: MONDO:1012602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in dogs in which there is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000403-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, dog","termid":"MONDO:1010840"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, dog","synonyms":[{"name":"gangliosidosis, GM2, generic, dog","type":"related"}],"termid":"MONDO:1012602","xrefs":{"Monarch":{"xref_id":"1012602"}}}


id: GO:0090412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in fatty acid biosynthetic process.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process (obsolete GO:0090412)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0090412"}


id: PATO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000200 learning (obsolete PATO:0000200)","termid":"PATO:0000200"}


id: PBO:0040154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH2L pseudogene 3","termid":"PBO:0040154"}


id: PBO:0038702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 15","termid":"PBO:0038702"}


id: GO:1900350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from methylamine","synonyms":[{"name":"activation of methane biosynthetic process from methylamine","type":"narrow"},{"name":"up regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"up-regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"upregulation of methane biosynthetic process from methylamine","type":"exact"}],"termid":"GO:1900350"}


id: GO:0009193
data:
  {"annotated_genes":["SJAG_03676","SJAG_00885","SJAG_00779","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[94384,109226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[82300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[78342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate metabolic process","termid":"GO:0009185"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_03676":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009193","terms_by_termid":{"GO:0006225":null,"GO:0006256":null,"GO:0046704":null,"GO:0046705":null}}


id: PBO:0064608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 4 homeobox 2","termid":"PBO:0064608"}


id: MONDO:0044656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratinopathic ichthyosis","termid":"MONDO:0017266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolytic nevus","secondary_identifiers":["Orphanet:497737","UMLS:C1302848","GARD:22016","SCTID:400142003","MEDGEN:724389"],"synonyms":[{"name":"Epidermal nevus with epidermolytic hyperkeratosis","type":"exact"},{"name":"epidermolytic epidermal nevus","type":"exact"},{"name":"epidermolytic verrucous epidermal nevus","type":"exact"}],"termid":"MONDO:0044656","xrefs":{"Monarch":{"xref_id":"0044656"}}}


id: MONDO:1010841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gangliosidosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"},{"relation_name":"is_a","term_name":"lysosomal storage disease, domestic cat","termid":"MONDO:1010861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gangliosidosis, domestic cat","secondary_identifiers":["OMIA:000401-9685"],"termid":"MONDO:1010841","xrefs":{"Monarch":{"xref_id":"1010841"}}}


id: MONDO:0016304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pantothenate kinase-associated neurodegeneration","termid":"MONDO:0009319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0002525","MONDO:0002039"],"is_obsolete":false,"name":"classic pantothenate kinase-associated neurodegeneration","secondary_identifiers":["GARD:17114","Orphanet:216866","MEDGEN:1826057","NANDO:1200535","UMLS:C5679812"],"synonyms":[{"name":"NBIA1, classic form","type":"exact"},{"name":"PKAN, classic form","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 1, classic form","type":"exact"}],"termid":"MONDO:0016304","xrefs":{"Monarch":{"xref_id":"0016304"}}}


id: MONDO:0006381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histologic variant of solid/multicystic ameloblastoma characterized by the presence of basal cells forming anastomosing strands and cords in a delicate stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameloblastoma","termid":"MONDO:0017795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexiform ameloblastoma","secondary_identifiers":["NCIT:C39753","EFO:1000487","MEDGEN:96838","UMLS:C0457529"],"termid":"MONDO:0006381","xrefs":{"Monarch":{"xref_id":"0006381"}}}


id: GO:0035273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phthalate, any ester or salt of phthalic acid.","definition_xrefs":["PMID:31116073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phthalate binding","termid":"GO:0035273"}


id: PBO:0040003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 14 effector protein","termid":"PBO:0040003"}


id: PBO:0073476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan gamma","termid":"PBO:0073476"}


id: PBO:0005473
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nbs1-Interacting Protein 1","termid":"PBO:0005473"}


id: GO:0015157
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[77547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of oligosaccharide from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"oligosaccharide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endosomal oligosaccharide transporter","type":"narrow"}],"termid":"GO:0015157","terms_by_termid":{"GO:0005364":null,"GO:0008506":null}}


id: GO:0015279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A ligand-gated ion channel activity which transports calcium in response to emptying of intracellular calcium stores.","definition_xrefs":["GOC:dph","GOC:tb","PMID:15788710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"store-operated calcium channel activity","secondary_identifiers":["Reactome:R-HSA-434798"],"termid":"GO:0015279"}


id: MONDO:0003146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ependymoblastoma (obsolete MONDO:0003146)","termid":"MONDO:0003146","xrefs":{"Monarch":{"xref_id":"0003146"}}}


id: MONDO:0014607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the KCNA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 32","secondary_identifiers":["UMLS:C4225350","DOID:0080416","OMIM:616366","GARD:16096","MEDGEN:909501"],"synonyms":[{"name":"DEE32","type":"exact"},{"name":"EIEE32","type":"exact"},{"name":"KCNA2 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 32","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in KCNA2","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 32","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 32","type":"exact"}],"termid":"MONDO:0014607","xrefs":{"Monarch":{"xref_id":"0014607"}}}


id: PBO:0063182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox 3","termid":"PBO:0063182"}


id: GO:0010227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled shedding of floral organs.","definition_xrefs":["PMID:12972671","PO:0025395","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"abscission","termid":"GO:0009838"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ abscission","termid":"GO:0010227"}


id: PBO:0075397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP100 nuclear antigen","termid":"PBO:0075397"}


id: PBO:0090449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [acyl-carrier protein] S-malonyltransferase Mct1","termid":"PBO:0090449"}


id: PBO:0045254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1","termid":"PBO:0045254"}


id: GO:1902124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-pinoresinol.","definition_xrefs":["PMID:9872995","PMID:8910615","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-pinoresinol metabolic process","synonyms":[{"name":"(+)-pinoresinol metabolism","type":"exact"}],"termid":"GO:1902124"}


id: FYPO:0006866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is increased. Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PMID:30928696","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0004803","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"increased rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"increased rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0006866"}


id: FYPO:0004538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more microtubules than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"microtubules present in increased numbers","synonyms":[{"name":"increased level of MTs","type":"exact"},{"name":"microtubules present in greater numbers","type":"exact"},{"name":"microtubules present in increased numbers during mitotic cell cycle","type":"related"},{"name":"microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004538"}


id: PBO:0120970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB domain containing 3","termid":"PBO:0120970"}


id: PBO:0075960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 3","termid":"PBO:0075960"}


id: PBO:0030750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_response_to_pheromone_at_normal_pheromone_level_(obsolete_FYPO:0000987)","termid":"PBO:0030750"}


id: GO:1905848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidopamine.","definition_xrefs":["GOC:TermGenie","PMID:23721876","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidopamine","termid":"GO:1905846"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidopamine","termid":"GO:1905842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidopamine","synonyms":[{"name":"activation of cellular response to oxidopamine","type":"narrow"},{"name":"up regulation of cellular response to oxidopamine","type":"exact"},{"name":"up-regulation of cellular response to oxidopamine","type":"exact"},{"name":"upregulation of cellular response to oxidopamine","type":"exact"}],"termid":"GO:1905848"}


id: GO:2000430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil aggregation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"is_a","term_name":"regulation of neutrophil aggregation","termid":"GO:2000428"},{"relation_name":"positively_regulates","term_name":"neutrophil aggregation","termid":"GO:0070488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of neutrophil aggregation","synonyms":[{"name":"positive regulation of neutrocyte aggregation","type":"exact"},{"name":"positive regulation of neutrophil leucocyte aggregation","type":"exact"},{"name":"positive regulation of neutrophilic leukocyte aggregation","type":"exact"}],"termid":"GO:2000430"}


id: GO:0010826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of centrosome duplication. Centrosome duplication is the replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome duplication","termid":"GO:0010824"},{"relation_name":"is_a","term_name":"negative regulation of centrosome cycle","termid":"GO:0046606"},{"relation_name":"negatively_regulates","term_name":"centrosome duplication","termid":"GO:0051298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"negative regulation of centrosome duplication","termid":"GO:0010826"}


id: PBO:0012297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formylglycine-generating sulphatase enzyme domain containing (predicted)","termid":"PBO:0012297"}


id: PBO:0039255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 4 family member A1","termid":"PBO:0039255"}


id: PBO:0063673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 2","termid":"PBO:0063673"}


id: PBO:0067650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 825, pseudogene","termid":"PBO:0067650"}


id: PR:O60163
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine-sensitive aspartokinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03819","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.04","secondary_identifiers":["UniProtKB:O60163"],"synonyms":[{"name":"Spom972h-lysC","type":"exact"},{"name":"aspartate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60163"}


id: MONDO:1012750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in dogs due to a mutation in the DLX6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, dog","termid":"MONDO:1010526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, DLX6-related, dog","secondary_identifiers":["OMIA:001919-9615"],"synonyms":[{"name":"Cleft palate 1, DLX6-related in Canis lupus familiaris (dog)","type":"exact"}],"termid":"MONDO:1012750","xrefs":{"Monarch":{"xref_id":"1012750"}}}


id: PBO:0089773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3818 and PXA domain conserved fungal protein","termid":"PBO:0089773"}


id: GO:0097445
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron dense projection extending from the cytomatrix into the cytoplasm on which synaptic vesicles are tethered.","definition_xrefs":["NIF_Subcellular:sao494258938","PMID:15381754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone dense projection","synonyms":[{"name":"active zone dense projection","type":"exact"},{"name":"pre-synaptic active zone dense projection","type":"exact"}],"termid":"GO:0097445"}


id: GO:0060737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differential increase in size or mass of the prostate gland that contributes to the gland attaining its form.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"is_a","term_name":"prostate gland growth","termid":"GO:0060736"},{"relation_name":"part_of","term_name":"prostate gland morphogenesis","termid":"GO:0060512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland morphogenetic growth","synonyms":[{"name":"prostate gland growth involved in morphogenesis","type":"exact"}],"termid":"GO:0060737"}


id: MONDO:0800429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 4","secondary_identifiers":["MEDGEN:338829","UMLS:C1851968"],"synonyms":[{"name":"DYX4","type":"exact"}],"termid":"MONDO:0800429","xrefs":{"Monarch":{"xref_id":"0800429"}}}


id: PBO:0056623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED4 antisense RNA 1","termid":"PBO:0056623"}


id: PBO:0048742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 4","termid":"PBO:0048742"}


id: GO:0009172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate catabolic process","termid":"GO:0009128"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009159"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate catabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate breakdown","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate catabolism","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009172"}


id: GO:0106191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic cations linked to oxidoreductase reactions.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inogranic cations linked to oxidoreductase reactions (obsolete GO:0106191)","termid":"GO:0106191"}


id: MONDO:0020403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitral valve agenesis is a rare congenital heart malformation defined as an agenesis or severe hypoplasia of both mitral valve leaflets (complete agenesis) or one of the leaflets (partial agenesis). Complete mitral valve agenesis presents in the neonatal period with symptoms of severe mitral regurgitation and is rapidly fatal unless surgically treated. It is frequently associated with other heart malformations. Partial mitral valve agenesis may present at various ages, usually with symptoms of mitral regurgitation.","definition_xrefs":["Orphanet:99062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mitral valve agenesis","secondary_identifiers":["UMLS:C0685721","MEDGEN:672659","GARD:19629"],"termid":"MONDO:0020403","xrefs":{"Monarch":{"xref_id":"0020403"}}}


id: MONDO:0007040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acrocephalosyndactylia characterized by abnormalities in the bones of the legs, congenital heart defects and craniofacial defects and craniosynostosis. The patients suffer from cyanosis and other respiratory and breathing infections.","definition_xrefs":["DOID:0060359","Wikipedia:Sakati–Nyhan–Tisdale_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrocephalopolysyndactyly","termid":"MONDO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Sakati-Nyhan syndrome","secondary_identifiers":["UMLS:C1275079","OMIM:101120","GARD:115","MEDGEN:220889","MESH:C537227","Orphanet:3128","SCTID:403768004"],"synonyms":[{"name":"ACPS 3","type":"related"},{"name":"ACPS with leg hypoplasia","type":"exact"},{"name":"ACPS3","type":"related"},{"name":"Sakati syndrome","type":"related"},{"name":"Sakati-Nyhan syndrome","type":"exact"},{"name":"Sakati-Nyhan-Tisdale syndrome","type":"exact"},{"name":"acrocephalopolysyndactyly type 3","type":"exact"},{"name":"acrocephalopolysyndactyly type III","type":"exact"}],"termid":"MONDO:0007040","xrefs":{"Monarch":{"xref_id":"0007040"}}}


id: PBO:0050143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 2 pseudogene 1","termid":"PBO:0050143"}


id: GO:0021622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the oculomotor nerve is generated and organized. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","ISBN:0838580343","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"oculomotor nerve development","termid":"GO:0021557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve morphogenesis","synonyms":[{"name":"CN III morphogenesis","type":"related"}],"termid":"GO:0021622"}


id: GO:0051561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial calcium ion homeostasis","termid":"GO:0051560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"positive regulation of mitochondrial calcium ion concentration","synonyms":[{"name":"elevation of calcium ion concentration in mitochondria","type":"exact"},{"name":"elevation of calcium ion concentration in mitochondrion","type":"exact"},{"name":"elevation of mitochondrial calcium ion concentration","type":"exact"},{"name":"mitochondrial calcium ion concentration elevation","type":"exact"}],"termid":"GO:0051561"}


id: PBO:0078404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma locus antisense RNA 1","termid":"PBO:0078404"}


id: PBO:0027399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_triglyceride_biosynthetic_process","termid":"PBO:0027399"}


id: PBO:0044240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cupin superfamily member 1, pseudogene","termid":"PBO:0044240"}


id: PBO:0081069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 2","termid":"PBO:0081069"}


id: PBO:0066543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 7 binding protein","termid":"PBO:0066543"}


id: PBO:0090956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit p30, Rpp1","termid":"PBO:0090956"}


id: MONDO:1010779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia areata that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia areata, non-human animal","termid":"MONDO:1010140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia areata, domestic cat","secondary_identifiers":["OMIA:001702-9685"],"termid":"MONDO:1010779","xrefs":{"Monarch":{"xref_id":"1010779"}}}


id: PBO:0045302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNM3 intronic transcript 1","termid":"PBO:0045302"}


id: FYPO:0006758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect during G1 phase of the mitotic cell cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"protein absent from cell during mitotic G1 phase","synonyms":[{"name":"protein absent from cell during G1 phase during vegetative growth","type":"exact"},{"name":"protein absent from cell during G1 phase of mitotic cell cycle","type":"exact"},{"name":"undetectable cellular protein level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006758"}


id: GO:0016868
data:
  {"annotated_genes":["SJAG_00978","SJAG_02009","SJAG_02783","SJAG_01209","SJAG_00134","SJAG_03723"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72888,73820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004610"},{"annotations":[78487,117840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004614"},{"annotations":[74322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004619"},{"annotations":[81077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004615"},{"annotations":[75327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008973"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_00978":null,"SJAG_01209":null,"SJAG_02009":null,"SJAG_02783":null,"SJAG_03723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"intramolecular phosphotransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:5.4.2.-","GO:0016777"],"synonyms":[{"name":"intramolecular transferase activity, phosphotransferases","type":"exact"},{"name":"phosphomutase activity","type":"exact"},{"name":"phosphotransferase activity, with regeneration of donors, apparently catalyzing intramolecular transfers","type":"exact"}],"termid":"GO:0016868","terms_by_termid":{"GO:0004610":null,"GO:0004614":null,"GO:0004615":null,"GO:0004619":null,"GO:0008973":null}}


id: FYPO:0004709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:22064477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci","synonyms":[{"name":"increased number of Rad22 foci","type":"exact"}],"termid":"FYPO:0004709"}


id: FYPO:0001421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein processing is abnormal. Protein processing is the cleavage of one or more bonds within a protein that leads to the formation of mature, fully functional protein.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein processing","termid":"FYPO:0006374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein processing during vegetative growth","synonyms":[{"name":"abnormal protein cleavage during vegetative growth","type":"related"},{"name":"abnormal protein maturation by peptide bond cleavage during vegetative growth","type":"exact"},{"name":"abnormal protein maturation by peptide bond hydrolysis during vegetative growth","type":"exact"},{"name":"abnormal protein processing during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001421"}


id: MONDO:0012125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the GJC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelizaeus-Merzbacher-like disease","termid":"MONDO:0017226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 2","secondary_identifiers":["Orphanet:280282","OMIM:608804","UMLS:C1837355","MEDGEN:325157","GARD:17293","DOID:0060787","MESH:C563855"],"synonyms":[{"name":"GJC2 leukodystrophy","type":"exact"},{"name":"HLD2","type":"exact"},{"name":"PMLD1","type":"exact"},{"name":"Pelizaeus-Merzbacher-like disease 1","type":"exact"},{"name":"Pelizaeus-Merzbacher-like disease due to GJC2 mutation","type":"exact"},{"name":"Pelizaeus-Merzbacher-like disease, 1","type":"related"},{"name":"hypomyelinating leukodystrophy type 2","type":"exact"},{"name":"leukodystrophy caused by mutation in GJC2","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 2","type":"related"},{"name":"leukodystrophy, hypomyelinating, type 2","type":"exact"}],"termid":"MONDO:0012125","xrefs":{"Monarch":{"xref_id":"0012125"}}}


id: GO:0035653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex between proteins of the AP-1 adaptor complex and proteins and/or lipoproteins that are going to be transported by a clathrin-coated vesicle. The AP-1 adaptor protein complex is a component of the cytoplasmic coat found on clathrin-coated vesicles, and binds to sorting signals of cargo to facilitate their trafficking.","definition_xrefs":["GOC:lb","PMID:16162817","PMID:12802059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle cargo loading","termid":"GO:0035652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"clathrin-coated vesicle cargo loading, AP-1-mediated","synonyms":[{"name":"cargo loading into clathrin-coated vesicle, AP-1-mediated","type":"exact"}],"termid":"GO:0035653"}


id: GO:0097213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.","definition_xrefs":["GOC:yaf","PMID:20544854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"},{"relation_name":"is_a","term_name":"lysosomal membrane organization","termid":"GO:0097212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of lysosomal membrane permeability","synonyms":[{"name":"regulation of lysosome membrane permeability","type":"exact"}],"termid":"GO:0097213"}


id: FYPO:0004703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is longer and has a larger volume than normal, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"},{"relation_name":"is_a","term_name":"viable swollen elongated vegetative cell","termid":"FYPO:0002479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"viable curved, elongated, swollen vegetative cell","synonyms":[{"name":"curved elongated swollen viable cell","type":"exact"},{"name":"viable curved swollen elongated cell","type":"exact"},{"name":"viable curved, elongated, swollen cell during vegetative growth","type":"exact"},{"name":"viable curved, elongated, swollen vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004703"}


id: PBO:0051691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 antisense RNA 1","termid":"PBO:0051691"}


id: PBO:0088011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II membrane protein required for vesicular transport; required for vesicular transport between the endoplasmic reticulum and Golgi complex; v-SNARE with similarity to synaptobrevins","termid":"PBO:0088011"}


id: PBO:0068972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 216, pseudogene","termid":"PBO:0068972"}


id: PBO:0027803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_JM216","termid":"PBO:0027803"}


id: MONDO:1012649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of glycogen metabolism that occurs in horses due to a mutation in the GYS1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"},{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysaccharide storage myopathy, type 1, horse","secondary_identifiers":["OMIA:001158-9796"],"synonyms":[{"name":"PSSM1","type":"exact"},{"name":"polysaccharide storage myopathy, GYS1-related, horse","type":"exact"}],"termid":"MONDO:1012649","xrefs":{"Monarch":{"xref_id":"1012649"}}}


id: PBO:0069697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 976, pseudogene","termid":"PBO:0069697"}


id: GO:0002756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A toll-like receptor signaling pathway not relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate an immune response.","definition_xrefs":["GOC:add","PMID:12467241","PMID:12855817","PMID:15728447","ISBN:0781735149","PMID:12524386","PMID:15585605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"MyD88-independent toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-166166","Reactome:R-HSA-168927"],"synonyms":[{"name":"MyD88-independent TLR signaling pathway","type":"exact"},{"name":"MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002756"}


id: PBO:0057020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 107","termid":"PBO:0057020"}


id: PR:O13900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap114 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap114 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.09c","synonyms":[{"name":"Spom972h-sap114","type":"exact"},{"name":"spliceosome-associated protein 145 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13900"}


id: GO:0090592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis of DNA that is a part of the process of duplicating one or more molecules of DNA.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"},{"relation_name":"part_of","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"}


id: PBO:0005174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp11","termid":"PBO:0005174"}


id: PBO:0062192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily R member 1 pseudogene","termid":"PBO:0062192"}


id: MONDO:0018053
data:
  {"annotated_genes":["SJAG_01159","SJAG_01235","SJAG_03112","SJAG_00159","SJAG_03206","SJAG_01797","SJAG_00995","SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[87210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[87211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"},{"annotations":[87224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010495"},{"annotations":[87541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014841"},{"annotations":[88920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032806"},{"annotations":[88019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030517"},{"annotations":[88024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030518"}]},"cv_name":"mondo","definition":"Trichothiodystrophy or TTD is a heterogeneous group disorders characterized by short, brittle hair with low-sulphur content (due to an abnormal synthesis of the sulfur containing keratins).","definition_xrefs":["Orphanet:33364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00159":null,"SJAG_00995":null,"SJAG_01159":null,"SJAG_01207":null,"SJAG_01235":null,"SJAG_01797":null,"SJAG_03112":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10044628","UMLS:C1955934","icd11.foundation:1366758649","DOID:0111866","NORD:1292","NCIT:C4924","GARD:12109","MEDGEN:363064","OMIMPS:601675","NANDO:1200627","SCTID:723551003"],"synonyms":[{"name":"trichothiodystrophy syndrome","type":"exact"}],"termid":"MONDO:0018053","terms_by_termid":{"MONDO:0010495":null,"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null,"MONDO:0014841":null,"MONDO:0030517":null,"MONDO:0030518":null,"MONDO:0032806":null},"xrefs":{"Monarch":{"xref_id":"0018053"}}}


id: PR:Q8TFF8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB8B6.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB8B6.05c","synonyms":[{"name":"L-asparagine amidohydrolase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBPB8B6.05c","type":"exact"}],"termid":"PR:Q8TFF8"}


id: GO:2001119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a methanofuran.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanofuran metabolic process","synonyms":[{"name":"methanofuran metabolism","type":"exact"}],"termid":"GO:2001119"}


id: GO:0019147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-1-aminopropan-2-ol + NAD+ = aminoacetone + H+ + NADH.","definition_xrefs":["RHEA:16517","EC:1.1.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(R)-aminopropanol dehydrogenase activity","secondary_identifiers":["MetaCyc:AMINOPROPDEHYDROG-RXN","KEGG_REACTION:R03759"],"synonyms":[{"name":"(R)-1-aminopropan-2-ol:NAD+ oxidoreductase activity","type":"related"},{"name":"1-aminopropan-2-ol-NAD+ dehydrogenase activity","type":"related"},{"name":"1-aminopropan-2-ol-dehydrogenase activity","type":"related"},{"name":"DL-1-aminopropan-2-ol: NAD+ dehydrogenase activity","type":"related"},{"name":"L(+)-1-aminopropan-2-ol-NAD/NADP oxidoreductase activity","type":"related"},{"name":"L(+)-1-aminopropan-2-ol:NAD+ oxidoreductase activity","type":"related"},{"name":"L-aminopropanol dehydrogenase activity","type":"exact"}],"termid":"GO:0019147"}


id: GO:0060829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin in the anterior end of the neural plate. This regulation sets up a Wnt signaling gradient along the anterior/posterior axis.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060829)","synonyms":[{"name":"negative regulation of Wnt receptor signaling pathway through beta-catenin involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in neural plate anterior/posterior pattern","type":"exact"}],"termid":"GO:0060829"}


id: PBO:0042763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 57","termid":"PBO:0042763"}


id: MONDO:0019654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"familial idiopathic steroid-resistant nephrotic syndrome with diffuse mesangial sclerosis","secondary_identifiers":["NANDO:2200111","Orphanet:93217"],"termid":"MONDO:0019654","xrefs":{"Monarch":{"xref_id":"0019654"}}}


id: PR:O59784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein mde7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.07c","synonyms":[{"name":"Spom972h-mde7","type":"exact"},{"name":"mei4-dependent protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59784"}


id: PBO:0048309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 20","termid":"PBO:0048309"}


id: SO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is generated by backsplicing of exons or introns, resulting in a covalently closed loop without a 5’ cap or 3’ polyA tail.","definition_xrefs":["PMID:29086764","PMID:29182528","PMID:29576969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_mRNA","synonyms":[{"name":"circular mRNA","type":"exact"},{"name":"coding circRNA","type":"exact"}],"termid":"SO:0002292"}


id: FYECO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mannose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ mannose","termid":"FYECO:0000152"}


id: PBO:0053279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B5","termid":"PBO:0053279"}


id: MONDO:0022333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"5-nucleotidase syndrome","secondary_identifiers":["MEDGEN:419653","MESH:C535321","UMLS:C2930876","GARD:8242"],"synonyms":[{"name":"5'-Nucleotidase syndrome","type":"related"},{"name":"5'NT syndrome","type":"related"}],"termid":"MONDO:0022333","xrefs":{"Monarch":{"xref_id":"0022333"}}}


id: FYPO:0007962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal after nitrogen removal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased mating efficiency during nitrogen starvation","termid":"FYPO:0007962"}


id: GO:0034088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion","synonyms":[{"name":"mitotic cohesion stability","type":"related"}],"termid":"GO:0034088"}


id: PR:O74184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of rapamycin complex subunit LST8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19842:SF0","OMA:SCHPO02946","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein wat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.05c","secondary_identifiers":["UniProtKB:O74184"],"synonyms":[{"name":"Spom972h-MLST8","type":"exact"},{"name":"WD repeat-containing protein pop3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74184"}


id: MONDO:0011741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 6","secondary_identifiers":["OMIM:606874","UMLS:C1969837","MEDGEN:369600"],"synonyms":[{"name":"HSCR6","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0011741","xrefs":{"Monarch":{"xref_id":"0011741"}}}


id: PBO:0051651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 6","termid":"PBO:0051651"}


id: MONDO:0022849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital stenosis of cervical medullary canal","termid":"MONDO:0022849","xrefs":{"Monarch":{"xref_id":"0022849"}}}


id: PBO:0038416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within,_negative_effect","termid":"PBO:0038416"}


id: GO:0090026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of monocyte chemotaxis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of monocyte chemotaxis","termid":"GO:0090025"},{"relation_name":"positively_regulates","term_name":"monocyte chemotaxis","termid":"GO:0002548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte chemotaxis","termid":"GO:0090026"}


id: PBO:0041426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 48","termid":"PBO:0041426"}


id: GO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a cardiac muscle cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"},{"relation_name":"part_of","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell contraction","termid":"GO:0086003"}


id: MONDO:0019803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angioma serpiginosum (AS) is a benign congenital skin disease characterized by progressive dilation of the subepidermal skin vessels manifesting as purple punctate lesions usually appearing on the lower limbs and buttocks and following the lines of Blaschko.","definition_xrefs":["Orphanet:95429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"},{"relation_name":"is_a","term_name":"capillary malformation","termid":"MONDO:0016231"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioma serpiginosum","secondary_identifiers":["UMLS:C0263637","SCTID:49465005","DOID:4028","icd11.foundation:1724787481","MEDGEN:75528","GARD:15021","NCIT:C3926"],"synonyms":[{"name":"angioma serpiginosum of skin","type":"exact"}],"termid":"MONDO:0019803","xrefs":{"Monarch":{"xref_id":"0019803"}}}


id: PBO:0030469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_iron-sulfur_cluster_transfer","termid":"PBO:0030469"}


id: FYPO:0004165
data:
  {"alleles_by_uniquename":{"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121560],"is_not":false,"summary":null,"term":"FYPO:0004165"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of glucose consumed by cells in a given time is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":1,"genotypes_by_uniquename":{"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal glucose consumption","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal glucose consumption during mitotic cell cycle","type":"related"},{"name":"normal glucose consumption during vegetative growth","type":"exact"},{"name":"normal glucose uptake","type":"related"}],"termid":"FYPO:0004165","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0004165":null}}


id: MONDO:0005599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from mesothelial cells in the pleura. It is characterized by the presence of neoplastic cells with an epithelioid appearance. In the majority of cases, the neoplastic epithelioid cells lack significant cytologic atypia; mitotic figures are infrequently seen. In a minority of cases, the neoplastic cells are poorly differentiated and there is evidence of nuclear atypia and increased mitotic activity.","definition_xrefs":["NCIT:C7985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant epithelioid mesothelioma","secondary_identifiers":["UMLS:C0862312","DOID:4489","EFO:0006452","ICDO:9052/3","MEDGEN:163578"],"synonyms":[{"name":"epithelial mesothelioma","type":"exact"},{"name":"epithelioid mesothelioma","type":"exact"},{"name":"epithelioid mesothelioma, malignant","type":"exact"},{"name":"epithelioid mesothelioma, malignant (morphologic abnormality)","type":"exact"},{"name":"malignant epithelial mesothelioma","type":"exact"}],"termid":"MONDO:0005599","xrefs":{"Monarch":{"xref_id":"0005599"}}}


id: GO:0071618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of acyl groups from an acyl-CoA to lysophosphatidylethanolamine.","definition_xrefs":["GOC:cjk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysophospholipid acyltransferase activity","termid":"GO:0071617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"lysophosphatidylethanolamine acyltransferase activity","termid":"GO:0071618"}


id: MONDO:0012476
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86967],"is_not":false,"summary":null,"term":"MONDO:0012476"}]},"cv_name":"mondo","definition":"Autosomal spastic paraplegia type 30 (SPG30) is a form of hereditary spastic paraplegia characterized by either a pure spastic paraplegia phenotype, usually presenting in the first or second decade of life, with spastic lower extremities, usteady spastic gait, hyperreflexia and extensor plantar responses, or as a complicated phenotype with the additional manifestations of distal wasting, saccadic ocular movements, mild cerebellar ataxia and mild, distal, axonal neuropathy.","definition_xrefs":["Orphanet:101010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"},{"relation_name":"is_a","term_name":"KIF1A related neurological disorder","termid":"MONDO:0700055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 30","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:610357","DOID:0110781","MESH:C563677","SCTID:763377006","GARD:16942","UMLS:C5235139","MEDGEN:1710020"],"synonyms":[{"name":"KIF1A hereditary spastic paraplegia","type":"exact"},{"name":"SPG30","type":"exact"},{"name":"autosomal recessive spastic paraplegia 30","type":"exact"},{"name":"autosomal spastic paraplegia type 30","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in KIF1A","type":"exact"},{"name":"hereditary spastic paraplegia type 30","type":"exact"},{"name":"spastic paraplegia 30, autosomal dominant","type":"exact"},{"name":"spastic paraplegia 30, autosomal recessive","type":"related"}],"termid":"MONDO:0012476","terms_by_termid":{"MONDO:0012476":null},"xrefs":{"Monarch":{"xref_id":"0012476"}}}


id: PBO:0061789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 1","termid":"PBO:0061789"}


id: PBO:0112744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomerase Cajal body protein WRAP53 orthlog, Gnr1","termid":"PBO:0112744"}


id: GO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cytochrome c L-lysine = S-adenosyl-L-homocysteine + cytochrome c N6-methyl-L-lysine. This is the addition of a methyl group to the N6 atom of a lysine residue in cytochrome c.","definition_xrefs":["EC:2.1.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0140096","GO:0008276","GO:0003674"],"is_obsolete":false,"name":"[cytochrome c]-lysine N-methyltransferase activity","secondary_identifiers":["RHEA:24312","MetaCyc:2.1.1.59-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:cytochrome c-L-lysine 6-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:cytochrome c-L-lysine N6-methyltransferase activity","type":"related"},{"name":"cytochrome c (lysine) methyltransferase activity","type":"related"},{"name":"cytochrome c methyltransferase activity","type":"related"},{"name":"cytochrome c-lysine N-methyltransferase activity","type":"related"},{"name":"cytochrome c-specific protein methylase III activity","type":"related"},{"name":"cytochrome c-specific protein-lysine methyltransferase activity","type":"related"}],"termid":"GO:0000277"}


id: PATO:0015001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence due to a degenerative process.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PATO:0000462"},{"relation_name":"is_a","term_name":"degenerate","termid":"PATO:0000639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absence due to degeneration","termid":"PATO:0015001"}


id: MONDO:0004591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An impetigo that is characterized as a form of severe pustular psoriasis occurring in pregnancy.","definition_xrefs":["DOID:8503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impetigo","termid":"MONDO:0004592"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"impetigo herpetiformis","secondary_identifiers":["UMLS:C1314968","ICD9:694.3","NANDO:1200243","SCTID:65539006","MEDGEN:727290"],"termid":"MONDO:0004591","xrefs":{"Monarch":{"xref_id":"0004591"}}}


id: MONDO:0006285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from a pleomorphic adenoma in the major salivary glands. It usually originates in the parotid gland. Patients usually present with a history of a long-standing tumor mass which grew rapidly in the past few months. Patients with non-invasive or minimally invasive carcinoma have an excellent prognosis. In cases where there is invasion of the surrounding tissues, the clinical course is aggressive.","definition_xrefs":["NCIT:C5975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland carcinoma","termid":"MONDO:0006284"},{"relation_name":"is_a","term_name":"salivary gland carcinoma ex pleomorphic adenoma","termid":"MONDO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"major salivary gland carcinoma ex pleomorphic adenoma","secondary_identifiers":["EFO:1000345","MEDGEN:233655","UMLS:C1334550"],"synonyms":[{"name":"carcinoma ex pleomorphic adenoma of Major salivary gland","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of the Major salivary gland","type":"exact"},{"name":"major salivary gland carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"major salivary gland salivary gland carcinoma ex pleomorphic adenoma","type":"exact"}],"termid":"MONDO:0006285","xrefs":{"Monarch":{"xref_id":"0006285"}}}


id: PBO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3","termid":"PBO:0000176"}


id: GO:1990033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a dendritic tree where it branches, giving rise to a dendritic branch.","definition_xrefs":["GOC:aruk","GOC:bc","NIF_Subcellular:sao1348591767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection branch point","termid":"GO:0061845"},{"relation_name":"part_of","term_name":"dendritic tree","termid":"GO:0097447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic branch point","synonyms":[{"name":"branch point of dendrite","type":"exact"}],"termid":"GO:1990033"}


id: MONDO:0957821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 88","secondary_identifiers":["UMLS:C5882706","MEDGEN:1845113","DOID:0070587","OMIM:620547"],"termid":"MONDO:0957821","xrefs":{"Monarch":{"xref_id":"0957821"}}}


id: PBO:0060520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF antisense RNA 2","termid":"PBO:0060520"}


id: PBO:0108552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 associated factor 1 Laf1","termid":"PBO:0108552"}


id: CHEBI:52289
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wortmannin","termid":"CHEBI:52289"}


id: MONDO:0012751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial abdominal aortic aneurysm","termid":"MONDO:0007031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial abdominal, 3","secondary_identifiers":["OMIM:611891","UMLS:C2678470","GARD:16493","MESH:C567501","MEDGEN:394525"],"synonyms":[{"name":"AAA3","type":"exact"},{"name":"aneurysm, familial abdominal 3","type":"exact"},{"name":"aortic aneurysm, familial abdominal, 3","type":"exact"}],"termid":"MONDO:0012751","xrefs":{"Monarch":{"xref_id":"0012751"}}}


id: PBO:0047643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1B pseudogene 1","termid":"PBO:0047643"}


id: PBO:0072121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 10","termid":"PBO:0072121"}


id: PATO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000359 water content value (obsolete PATO:0000359)","termid":"PATO:0000359"}


id: PBO:0026810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_cell_wall-degrading_enzymes","termid":"PBO:0026810"}


id: GO:0048369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lateral mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm morphogenesis","termid":"GO:0048332"},{"relation_name":"is_a","term_name":"mesenchyme morphogenesis","termid":"GO:0072132"},{"relation_name":"part_of","term_name":"lateral mesoderm development","termid":"GO:0048368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm morphogenesis","synonyms":[{"name":"lateral plate mesoderm morphogenesis","type":"exact"}],"termid":"GO:0048369"}


id: SO:0000537
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"12 or 23 nucleotide spacer between the V-heptamer and the V-nonamer of a V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_spacer","synonyms":[{"name":"V spacer","type":"exact"},{"name":"V-SPACER","type":"exact"}],"termid":"SO:0000537"}


id: GO:0120019
data:
  {"annotated_genes":["SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99505],"is_not":false,"summary":null,"term":"GO:0120019"}]},"cv_name":"molecular_function","definition":"Removes phosphatidylcholine from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:krc","PMID:25797198","PMID:20823909","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0005215","GO:0120013","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine transfer activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483087","Reactome:R-HSA-1483219","Reactome:R-HSA-1483211"],"synonyms":[{"name":"intermembrane phosphatidylcholine transfer activity","type":"narrow"},{"name":"phosphatidylcholine carrier activity","type":"exact"}],"termid":"GO:0120019","terms_by_termid":{"GO:0120019":null}}


id: MONDO:0022874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum dysgenesis hypopituitarism","termid":"MONDO:0022874","xrefs":{"Monarch":{"xref_id":"0022874"}}}


id: PBO:0066875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 175","termid":"PBO:0066875"}


id: GO:1900744
data:
  {"annotated_genes":["SJAG_04825","SJAG_03903","SJAG_00027","SJAG_01199","SJAG_03893","SJAG_02183","SJAG_02945","SJAG_06621","SJAG_06622","SJAG_06592","SJAG_03828","SJAG_02013","SJAG_03185","SJAG_00318","SJAG_02000","SJAG_01587","SJAG_05000","SJAG_02135"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120337,101391,119083,96985,97923,93616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[110917,113812,119376,97209,110918,114476,120300,110923,110919,110920,110922,110921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of p38MAPK cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"p38MAPK cascade","termid":"GO:0038066"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of p38MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of osmosensory signaling MAPK cascade","type":"narrow"},{"name":"regulation of p38 MAPK cascade","type":"exact"},{"name":"regulation of p38 cascade","type":"exact"}],"termid":"GO:1900744","terms_by_termid":{"GO:1900745":null,"GO:1903753":null}}


id: RO:HOM0000026
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"1:many orthology that involves a gene in species A and its ortholog in species B, when duplications more recent than the species split have occurred in species A but not in species B.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_many_orthology_relationship_with","termid":"RO:HOM0000034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_semi-orthology_relationship_with","synonyms":[{"name":"semi-orthologous to","type":"exact"}],"termid":"RO:HOM0000026"}


id: GO:1905073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:rl","GOC:BHF","PMID:18718461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tight junction disassembly","synonyms":[{"name":"regulation of occluding cell junction disassembly","type":"exact"},{"name":"regulation of occluding junction disassembly","type":"exact"}],"termid":"GO:1905073"}


id: GO:1905546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylpropanoid stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22700048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phenylpropanoid","termid":"GO:1905546"}


id: PBO:0072616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 11","termid":"PBO:0072616"}


id: PR:O42832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent rRNA methyltransferase spb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.11","secondary_identifiers":["UniProtKB:O42832"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-methionine-dependent methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ3","type":"exact"}],"termid":"PR:O42832"}


id: PBO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn2 (predicted)","termid":"PBO:0004456"}


id: GO:1990915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an ascospore wall.","definition_xrefs":["PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cell wall","termid":"GO:0005199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of ascospore wall","termid":"GO:1990915"}


id: FYECO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cerulenin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cerulenin","termid":"FYECO:0000336"}


id: PBO:0078135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 14/delta variable 4","termid":"PBO:0078135"}


id: MONDO:0011938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the GATA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"},{"relation_name":"is_a","term_name":"structural congenital heart disease, multiple types - GATA4","termid":"MONDO:0100009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 2","secondary_identifiers":["DOID:0110107","MEDGEN:334249","OMIM:607941","UMLS:C1842778","MESH:C538263"],"synonyms":[{"name":"ASD2","type":"exact"},{"name":"GATA4 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in GATA4","type":"exact"},{"name":"atrial heart septal defect type 2","type":"exact"},{"name":"atrial septal defect 2","type":"exact"},{"name":"atrial septal defect type 2","type":"exact"}],"termid":"MONDO:0011938","xrefs":{"Monarch":{"xref_id":"0011938"}}}


id: PBO:0034666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle","termid":"PBO:0034666"}


id: PBO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase Cit1","termid":"PBO:0001493"}


id: MONDO:0007388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital shortness of the costocoracoid ligament is a rare anomaly characterized by fixation of the scapula to the first rib, resulting in a cosmetic deformity with rounding of the shoulders and loss of the anterior clavicular contour.","definition_xrefs":["Orphanet:2391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenitally short costocoracoid ligament","secondary_identifiers":["OMIM:122580","MESH:C536448","MEDGEN:342257","UMLS:C1852523","GARD:1551","SCTID:725101002"],"synonyms":[{"name":"congenital shortness of the costocoracoid ligament","type":"related"},{"name":"costocoracoid ligament congenitally short","type":"related"},{"name":"costocoracoid ligament, congenitally short","type":"related"},{"name":"fixation of the scapula to the first rib by a congenitally short costocoracoid ligament","type":"related"}],"termid":"MONDO:0007388","xrefs":{"Monarch":{"xref_id":"0007388"}}}


id: GO:0045045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway along which proteins and other substances are moved around and out of the cell. After synthesis on the ribosomes of the endoplasmic reticulum (ER), completed polypeptide chains are moved to the Golgi complex and subsequently sorted to various destinations. Proteins synthesized and sorted in the secretory pathway include not only those that are secreted from the cell but also enzymes and other resident proteins in the lumen of the ER, Golgi, and lysosomes as well as integral proteins in the membranes of these organelles and the plasma membrane.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete secretory pathway (obsolete GO:0045045)","synonyms":[{"name":"secretory pathway","type":"exact"}],"termid":"GO:0045045"}


id: GO:0040002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a collagen and cuticulin-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collagen and cuticulin-based cuticle development","synonyms":[{"name":"collagen and cuticulin-based cuticle anabolism","type":"exact"},{"name":"collagen and cuticulin-based cuticle biosynthetic process","type":"exact"},{"name":"collagen and cuticulin-based cuticle formation","type":"exact"},{"name":"collagen and cuticulin-based cuticle synthesis","type":"exact"}],"termid":"GO:0040002"}


id: PBO:0014588
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EThanol Dependent","termid":"PBO:0014588"}


id: PBO:0046922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 41 member A, Y-linked 1","termid":"PBO:0046922"}


id: PBO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin-associated protein Pds5","termid":"PBO:0001234"}


id: PBO:0075213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin gamma 1","termid":"PBO:0075213"}


id: MONDO:0008127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ophthalmomandibulomelic dysplasia is characterized by complete blindness due to corneal opacities, difficult mastication due to temporomandibular fusion and anomalies of the arms.","definition_xrefs":["Orphanet:2741"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic corneal dystrophy (obsolete MONDO:0020215)","termid":"MONDO:0020215"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ophthalmomandibulomelic dysplasia","secondary_identifiers":["GARD:4365","icd11.foundation:869046719","MESH:C563501","SCTID:715484003","MEDGEN:331604","OMIM:164900","UMLS:C1833872"],"synonyms":[{"name":"OMM syndrome","type":"exact"},{"name":"Ophthalmo-mandibulo-melic dysplasia","type":"related"},{"name":"Pillay syndrome","type":"exact"},{"name":"ophthalmomandibulomelic dysplasia","type":"exact"}],"termid":"MONDO:0008127","xrefs":{"Monarch":{"xref_id":"0008127"}}}


id: MONDO:1040049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the TTC8 gene.","definition_xrefs":["PMID:19797195","PMID:30901771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC8-related ciliopathy","synonyms":[{"name":"TTC8-related ciliopathy","type":"exact"}],"termid":"MONDO:1040049","xrefs":{"Monarch":{"xref_id":"1040049"}}}


id: PBO:0090254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase (H3-trimethyl-K4 specific), Lid2 complex subunit Lid2","termid":"PBO:0090254"}


id: GO:1904738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a vascular associated smooth muscle cell from one site to another.","definition_xrefs":["GOC:rph","GOC:BHF","PMID:20693317","GOC:BHF_miRNA","GO_REF:0000091","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell migration","synonyms":[{"name":"vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904738"}


id: MONDO:0012568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteoarthritis","termid":"MONDO:0005178"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis susceptibility 4","secondary_identifiers":["UMLS:C1835815","MEDGEN:332068","OMIM:610839"],"synonyms":[{"name":"OS4","type":"exact"},{"name":"osteoarthritis susceptibility 4","type":"exact"},{"name":"osteoarthritis, generalized, without dysplasia","type":"related"}],"termid":"MONDO:0012568","xrefs":{"Monarch":{"xref_id":"0012568"}}}


id: MONDO:0975797
data:
  {"annotated_genes":["SJAG_02587"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88755],"is_not":false,"summary":null,"term":"MONDO:0975797"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02587":null},"genotype_count":0,"is_obsolete":false,"name":"myelofibrosis, congenital, with anemia, neutropenia, developmental delay, and ocular abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620939"],"termid":"MONDO:0975797","terms_by_termid":{"MONDO:0975797":null},"xrefs":{"Monarch":{"xref_id":"0975797"}}}


id: GO:0099094
data:
  {"annotated_genes":["SJAG_03895","SJAG_02322"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81714,74925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an inorganic cation by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ligand-gated monoatomic cation channel activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ligand-gated cation channel activity","type":"broad"}],"termid":"GO:0099094","terms_by_termid":{"GO:0005227":null}}


id: GO:0003973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxy-acid + O2 = 2-oxo acid + hydrogen peroxide.","definition_xrefs":["RHEA:16789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-2-hydroxy-acid oxidase activity","secondary_identifiers":["EC:1.1.3.15","GO:0052854","MetaCyc:S-2-HYDROXY-ACID-OXIDASE-RXN","Reactome:R-HSA-6787811","Reactome:R-HSA-389842","GO:0008891","GO:0052852","GO:0052853"],"synonyms":[{"name":"L-2-hydroxy acid oxidase","type":"related"},{"name":"L-alpha-hydroxy acid oxidase","type":"related"},{"name":"glycolate oxidase activity","type":"related"},{"name":"hydroxy-acid oxidase A activity","type":"narrow"},{"name":"hydroxy-acid oxidase B activity","type":"narrow"},{"name":"hydroxyacid oxidase A","type":"related"},{"name":"long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity","type":"narrow"},{"name":"medium-chain-(S)-2-hydroxy-acid oxidase activity","type":"narrow"},{"name":"very-long-chain-(S)-2-hydroxy-acid oxidase activity","type":"narrow"}],"termid":"GO:0003973"}


id: FYPO:0001029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of canavanine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to canavanine","synonyms":[{"name":"resistance to canavanine during mitotic cell cycle","type":"related"},{"name":"resistance to canavanine during vegetative growth","type":"exact"},{"name":"resistant to canavanine","type":"exact"}],"termid":"FYPO:0001029"}


id: PR:O94468
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mag2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.11","synonyms":[{"name":"3-methyladenine DNA glycosidase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"3MEA DNA glycosylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mag2","type":"exact"}],"termid":"PR:O94468"}


id: GO:0031179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent alteration of one or more amino acid residues within a peptide, resulting in a change in the properties of that peptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide modification","termid":"GO:0031179"}


id: GO:0002523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body contributing to an inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:14708592","PMID:8600538","PMID:7507411","PMID:14680625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration involved in inflammatory response","synonyms":[{"name":"immune cell migration during inflammatory response","type":"related"},{"name":"immune cell trafficking during inflammatory response","type":"related"},{"name":"leucocyte migration during inflammatory response","type":"related"},{"name":"leucocyte trafficking during inflammatory response","type":"related"},{"name":"leukocyte migration during inflammatory response","type":"related"},{"name":"leukocyte trafficking during inflammatory response","type":"related"}],"termid":"GO:0002523"}


id: PBO:0059973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 18","termid":"PBO:0059973"}


id: PBO:0113064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex; binds to and modulates the activity of RNA polymerases I and II; required for expression of certain genes, modification of some histones, and telomere maintenance; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay; role in preventing L-A mycovirus pathogenesis; protein abundance increases in response to DNA replication stress; human homolog, parafibromin, is a tumour suppressor linked to breast, renal and gastric cancers","termid":"PBO:0113064"}


id: PBO:0046513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERICH6 antisense RNA 1","termid":"PBO:0046513"}


id: PBO:0057951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3674","termid":"PBO:0057951"}


id: MONDO:0006110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bladder adenocarcinoma (obsolete MONDO:0006110)","termid":"MONDO:0006110","xrefs":{"Monarch":{"xref_id":"0006110"}}}


id: GO:0017062
data:
  {"annotated_genes":["SJAG_03099","SJAG_01141","SJAG_01405","SJAG_04560","SJAG_05305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109567,80167,61170,114848,78721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034551"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the cytochrome bc(1) complex, a transmembrane lipoprotein complex that it catalyzes the reduction of cytochrome c by accepting reducing equivalents from Coenzyme Q, by the aggregation, arrangement and bonding together of its constituents.","definition_xrefs":["PMID:12833641","PMID:20116362","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01141":null,"SJAG_01405":null,"SJAG_03099":null,"SJAG_04560":null,"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"respiratory chain complex III assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"coenzyme Q and cytochrome c reductase complex assembly","type":"exact"},{"name":"coenzyme Q and cytochrome c reductase complex biogenesis","type":"exact"},{"name":"complex III assembly","type":"exact"},{"name":"complex III biogenesis","type":"exact"},{"name":"cytochrome bc(1) complex assembly","type":"exact"},{"name":"cytochrome bc(1) complex biogenesis","type":"exact"}],"termid":"GO:0017062","terms_by_termid":{"GO:0034551":null}}


id: FYECO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using methyl methanesulfonate and subsequently released from the block.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMS block and release","termid":"FYECO:0000464"}


id: PBO:0070648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 19","termid":"PBO:0070648"}


id: GO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aryl hydrocarbon receptor nuclear translocator activity (obsolete GO:0005061)","synonyms":[{"name":"aryl hydrocarbon receptor nuclear translocator activity","type":"exact"}],"termid":"GO:0005061"}


id: PBO:0059784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 10","termid":"PBO:0059784"}


id: GO:0098906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a Purkinje myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"regulates","term_name":"Purkinje myocyte action potential","termid":"GO:0086017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Purkinje myocyte action potential","termid":"GO:0098906"}


id: PBO:0067242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 314, pseudogene","termid":"PBO:0067242"}


id: GO:0006248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CMP, cytidine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CMP metabolic process","termid":"GO:0046035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"CMP catabolic process","synonyms":[{"name":"CMP breakdown","type":"exact"},{"name":"CMP catabolism","type":"exact"},{"name":"CMP degradation","type":"exact"}],"termid":"GO:0006248"}


id: PR:000037082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 (Schizosaccharomyces pombe) that has not been post-translationally modified to include an acetylated N-terminal methionine.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8 (Schizosaccharomyces pombe)","termid":"PR:000027986"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc8/UnMod(M1)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: tropomyosin cdc8, non-acetylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc8/AcRes-","type":"exact"},{"name":"cdc8/UnMod(M1)","type":"exact"}],"termid":"PR:000037082"}


id: PBO:0040070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin beta 1","termid":"PBO:0040070"}


id: MONDO:0016182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of protein O-mannose beta1, 2N-acetylglucosaminyltransferase (obsolete MONDO:0016182)","secondary_identifiers":["Orphanet:209024"],"synonyms":[{"name":"qualitative or quantitative defects of protein POMGNT1","type":"exact"}],"termid":"MONDO:0016182","xrefs":{"Monarch":{"xref_id":"0016182"}}}


id: PBO:0064303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmolipin","termid":"PBO:0064303"}


id: GO:0019729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP583 chromophore cross-link from the alpha-carboxyl carbon of residue n, a glutamine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0189"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-glutaminyl-5-imidazolinone glycine (obsolete GO:0019729)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-glutaminyl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-glutaminyl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0019729"}


id: GO:0140735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lovastatin (also known as mevinolin, mevacor or monacolin K), a hypolipidemic inhibitor of (3S)-hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR).","definition_xrefs":["PMID:10334994","PMID:10381407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lovastatin biosynthetic process","secondary_identifiers":["kegg.module:M00893","MetaCyc:PWY-7535"],"synonyms":[{"name":"lovastatin anabolism","type":"exact"},{"name":"lovastatin biosynthesis","type":"exact"},{"name":"lovastatin formation","type":"exact"},{"name":"lovastatin synthesis","type":"exact"},{"name":"mevacor anabolism","type":"exact"},{"name":"mevacor biosynthesis","type":"exact"},{"name":"mevacor biosynthetic process","type":"exact"},{"name":"mevacor formation","type":"exact"},{"name":"mevacor synthesis","type":"exact"},{"name":"mevinolin anabolism","type":"exact"},{"name":"mevinolin biosynthesis","type":"exact"},{"name":"mevinolin biosynthetic process","type":"exact"},{"name":"mevinolin formation,","type":"exact"},{"name":"mevinolin synthesis","type":"exact"},{"name":"monacolin K anabolism","type":"exact"},{"name":"monacolin K biosynthesis","type":"exact"},{"name":"monacolin K biosynthetic process","type":"exact"},{"name":"monacolin K formation","type":"exact"},{"name":"monacolin K synthesis","type":"exact"}],"termid":"GO:0140735"}


id: FYPO:0000991
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[121166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03689":null,"SJAG_04697":null},"genotype_count":2,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of substance in cell","references_by_uniquename":{"PMID:35226668":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697","SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta","gms1delta"],"synonyms":[{"name":"reduced level of substance in cell","type":"exact"}],"termid":"FYPO:0000991","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: FYPO:0000874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000874"}


id: PBO:0072583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 1B","termid":"PBO:0072583"}


id: GO:0048682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in sprouting of an injured axon.","definition_xrefs":["GOC:lm","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sprouting of injured axon","termid":"GO:0048682"}


id: PBO:0031297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_vegetative_cell","termid":"PBO:0031297"}


id: MONDO:0015342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute transverse myelitis (ATM) is an inflammatory demyelinating disorder of the spinal cord that can be either idiopathic (IATM) or secondary to a known cause (SATM).","definition_xrefs":["Orphanet:139417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelitis","termid":"MONDO:0002565"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute transverse myelitis","secondary_identifiers":["GARD:19913","MESH:D009188","UMLS:C0270627","MEDGEN:82847","ICD9:323.9","NCIT:C128378","ICD9:341.20","SCTID:47000000"],"termid":"MONDO:0015342","xrefs":{"Monarch":{"xref_id":"0015342"}}}


id: FYPO:0004791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is greater than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"increased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"increased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"increased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004791"}


id: PBO:0113430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser-tRNA(Ala) hydrolase; hydrolyzes Ser-mischarged cytoplasmic and mitochondrial tRNAs; regulates translational fidelity based on Ala- and Thr-to-Ser misincorporation in the null mutant; trans-editing factor for alanyl- and threonyl-tRNA synthetases and seryl-tRNA synthetase (SerRS) via hydrolysis; null mutant displays decreased translation rate and increased readthrough of premature stop codons; (GFP)-fusion protein localizes to the cytoplasm; homologous to human trans-editing factor AARSD","termid":"PBO:0113430"}


id: MONDO:0958159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell sarcoma that is characterized by the presence of small round or elongated malignant cells with a small amount of cytoplasm and the presence of BCOR genetic alterations.","definition_xrefs":["DOID:0081402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell sarcoma","termid":"MONDO:0006974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcoma with BCOR genetic alterations","secondary_identifiers":["MEDGEN:1791498","UMLS:C5555057","NCIT:C178465"],"termid":"MONDO:0958159","xrefs":{"Monarch":{"xref_id":"0958159"}}}


id: PBO:0080101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP11 small subunit processome component","termid":"PBO:0080101"}


id: PBO:0061325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B3","termid":"PBO:0061325"}


id: PBO:0054443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1840","termid":"PBO:0054443"}


id: PBO:0059073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOCS2 divergent transcript","termid":"PBO:0059073"}


id: MONDO:0016127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"bacterial myositis","secondary_identifiers":["UMLS:C0263979","MEDGEN:538237","GARD:20378","SCTID:30330001","icd11.foundation:1277815767","Orphanet:206994"],"termid":"MONDO:0016127","xrefs":{"Monarch":{"xref_id":"0016127"}}}


id: PBO:0040328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 3","termid":"PBO:0040328"}


id: GO:0016768
data:
  {"annotated_genes":["SJAG_04481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104712],"is_not":false,"summary":null,"term":"GO:0016768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethioninamine + spermidine = 5'-methylthioadenosine + spermine.","definition_xrefs":["EC:2.5.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"spermine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SPERMINE-SYNTHASE-RXN","Reactome:R-HSA-351210","RHEA:19973"],"synonyms":[{"name":"S-adenosylmethioninamine:spermidine 3-aminopropyltransferase activity","type":"related"},{"name":"spermidine aminopropyltransferase activity","type":"related"},{"name":"spermine synthetase activity","type":"related"}],"termid":"GO:0016768","terms_by_termid":{"GO:0016768":null}}


id: PBO:0119982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3148","termid":"PBO:0119982"}


id: PBO:0018140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain protein, involved in cytoplasmic translation Gir2","termid":"PBO:0018140"}


id: FYPO:0008178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere inner repeat region are present at normal levels (i.e. indistinguishable from wild-type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal centromeric inner repeat transcript level","termid":"FYPO:0008178"}


id: PBO:0068401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF217 antisense RNA 1 (head to head)","termid":"PBO:0068401"}


id: GO:0075184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont infection cushion formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"infection cushion formation","termid":"GO:0075183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of infection cushion formation","synonyms":[{"name":"regulation of infection cushion formation on or near host","type":"exact"}],"termid":"GO:0075184"}


id: PR:O60079
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp12 gene.","definition_xrefs":["UniProtKB:O60079","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.05c","synonyms":[{"name":"Spom972h-ubp12","type":"exact"},{"name":"deubiquitinating enzyme 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60079"}


id: MONDO:0008034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Becker muscular dystrophy","termid":"MONDO:0010311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, pseudohypertrophic, with Internalized capillaries","secondary_identifiers":["OMIM:159050","GARD:15089","MESH:C563554","MEDGEN:320399","UMLS:C1834652"],"synonyms":[{"name":"muscular dystrophy, pseudohypertrophic, with Internalized capillaries","type":"exact"}],"termid":"MONDO:0008034","xrefs":{"Monarch":{"xref_id":"0008034"}}}


id: GO:0030905
data:
  {"annotated_genes":["SJAG_04275","SJAG_00971"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72391,121037],"is_not":false,"summary":null,"term":"GO:0030905"}]},"cv_name":"cellular_component","definition":"The dimeric subcomplex of the retromer, believed to be peripherally associated with the membrane. This dimeric complex is responsible for remodeling endosomal membranes to form a tube-structure to which cargo molecules are selected for recycling. The budding yeast complex comprises Vps5p and Vps17p, and may contain multiple copies of a Vps5p/Vps17p dimer. The mammalian complex contains SNX1 or SNX2 dimerized with SNX5 or SNX6.","definition_xrefs":["GOC:bf","PMID:9700157","PMID:26220253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"retromer complex","termid":"GO:0030904"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00971":null,"SJAG_04275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"retromer, tubulation complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SNX-BAR dimer","type":"exact"},{"name":"heterodimeric membrane-deforming retromer subcomplex","type":"exact"},{"name":"retromer complex, outer shell","type":"exact"}],"termid":"GO:0030905","terms_by_termid":{"GO:0030905":null}}


id: GO:2000031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salicylic acid mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:2000031"}


id: PBO:0064045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 79","termid":"PBO:0064045"}


id: PBO:0052066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 6B","termid":"PBO:0052066"}


id: MONDO:0700293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WFS1-related disorder","termid":"MONDO:0700293","xrefs":{"Monarch":{"xref_id":"0700293"}}}


id: MONDO:0009526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular aplasia, tibial campomelia, and oligosyndactyly syndrome","secondary_identifiers":["MESH:C565436","GARD:2622","Orphanet:480773","OMIM:246570","UMLS:C1855499","MEDGEN:340887"],"synonyms":[{"name":"FATCO syndrome","type":"exact"},{"name":"fibular aplasia, tibial campomelia, and oligosyndactyly syndrome","type":"exact"},{"name":"fibular aplasia-tibial campomelia-oligosyndactyly syndrome","type":"exact"},{"name":"limb deficiency-heart malformation syndrome","type":"related"},{"name":"terminal transverse defects of the limbs associated with congenital heart malformations","type":"exact"}],"termid":"MONDO:0009526","xrefs":{"Monarch":{"xref_id":"0009526"}}}


id: GO:0016606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body that is enriched in the lymphoid cell-specific protein LYSp100B; LANDs are globular, electron-dense structures and are morphologically distinct from the annular structures characteristic of PML bodies.","definition_xrefs":["PMID:8695863","PMID:10921892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"LYSP100-associated nuclear domain","synonyms":[{"name":"LANDs","type":"exact"}],"termid":"GO:0016606"}


id: MONDO:0029143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with hypertelorism and distinctive facies","secondary_identifiers":["MEDGEN:1648403","OMIM:618147","UMLS:C4748381"],"synonyms":[{"name":"IDDHDF","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL disorder WITH HYPERTELORISM AND DISTINCTIVE FACIES","type":"related"},{"name":"chromosome 14q32 deletion syndrome","type":"related"}],"termid":"MONDO:0029143","xrefs":{"Monarch":{"xref_id":"0029143"}}}


id: GO:0102309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dTDP-D-oliose + NADP = dTDP-4-dehydro-2,6-dideoxy-D-glucose + NADPH + H+.","definition_xrefs":["GOC:pz","PMID:21960454"],"gene_count":0,"genotype_count":0,"name":"obsolete dTDP-4-oxo-2,6-dideoxy-D-glucose 4-ketoreductase (dTDP-D-oliose producing) activity (obsolete GO:0102309)","termid":"GO:0102309"}


id: GO:0160203
data:
  {"annotated_genes":["SJAG_00196","SJAG_01647"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99080,100440],"is_not":false,"summary":null,"term":"GO:0160203"}]},"cv_name":"biological_process","definition":"A protein folding process that facilitates the import of a subset of soluble proteins into mitochondrial intermembrane space via disulfide bond formation.","definition_xrefs":["PMID:37159021","PMID:32936885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding","termid":"GO:0006457"},{"relation_name":"part_of","term_name":"protein import into mitochondrial intermembrane space","termid":"GO:0045041"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_01647":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0006810","GO:0055085","GO:0008150","GO:0006457"],"is_obsolete":false,"name":"mitochondrial disulfide relay system","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MIA pathway","type":"exact"},{"name":"mitochondrial intermembrane space assembly pathway","type":"exact"}],"termid":"GO:0160203","terms_by_termid":{"GO:0160203":null}}


id: PBO:0080155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vinculin","termid":"PBO:0080155"}


id: PBO:0086285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in cellular adhesion and filamentous growth; similar to Emp70p and Tmn2p; member of Transmembrane Nine family with 9 transmembrane segments; localizes to Golgi; induced by 8-methoxypsoralen plus UVA irradiation","termid":"PBO:0086285"}


id: GO:0120332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells, such as the bacteria, in the mouth.","definition_xrefs":["PMID:31882545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated modulation of oral microbiota composition","synonyms":[{"name":"host-induced regulation of oral microbiota composition","type":"related"},{"name":"host-mediated regulation of oral microbiota composition","type":"exact"}],"termid":"GO:0120332"}


id: GO:0102817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) + caffeoyl-CoA = gentiodelphin + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete caffeoyl-CoA:3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) 3'-O-hydroxycinnamoyltransferase activity (obsolete GO:0102817)","termid":"GO:0102817"}


id: RO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of intracellular endoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"has_endoparasite","termid":"RO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intracellular_endoparasite","termid":"RO:0002641"}


id: PBO:0029710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_high_pH","termid":"PBO:0029710"}


id: GO:0039716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory that is electron dense due to high levels of viral RNA. Produced by nucleo-cytoplasmic large DNA viruses (NCLDV) like Poxviridae, Asfarviridae and Iridoviridae, and dsRNA viruses like Reoviridae.","definition_xrefs":["VZ:1951","Wikipedia:Viroplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viroplasm viral factory","termid":"GO:0039716"}


id: GO:0008149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai","MetaCyc:PABASYN-CPLX"],"gene_count":0,"genotype_count":0,"name":"obsolete para-aminobenzoic acid (PABA) synthase (obsolete GO:0008149)","synonyms":[{"name":"para-aminobenzoic acid (PABA) synthase","type":"exact"}],"termid":"GO:0008149"}


id: PBO:0060587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 26","termid":"PBO:0060587"}


id: PBO:0069912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1204, pseudogene","termid":"PBO:0069912"}


id: GO:0051138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation.","definition_xrefs":["PMID:12154375","ISBN:0781735149","PMID:9133426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell differentiation","termid":"GO:0046638"},{"relation_name":"is_a","term_name":"regulation of NK T cell differentiation","termid":"GO:0051136"},{"relation_name":"positively_regulates","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of NK T cell differentiation","synonyms":[{"name":"activation of NK T cell differentiation","type":"narrow"},{"name":"positive regulation of NK T cell development","type":"related"},{"name":"positive regulation of NK T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of NK T-cell differentiation","type":"exact"},{"name":"positive regulation of NK T-lymphocyte differentiation","type":"exact"},{"name":"positive regulation of NKT cell differentiation","type":"exact"},{"name":"positive regulation of NT cell differentiation","type":"exact"},{"name":"positive regulation of natural T cell differentiation","type":"exact"},{"name":"positive regulation of natural killer T cell differentiation","type":"exact"},{"name":"stimulation of NK T cell differentiation","type":"narrow"},{"name":"up regulation of NK T cell differentiation","type":"exact"},{"name":"up-regulation of NK T cell differentiation","type":"exact"},{"name":"upregulation of NK T cell differentiation","type":"exact"}],"termid":"GO:0051138"}


id: PBO:0050906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein 44 like","termid":"PBO:0050906"}


id: MONDO:0032582
data:
  {"annotated_genes":["SJAG_04017"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88304],"is_not":false,"summary":null,"term":"MONDO:0032582"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16301","DOID:0080394","OMIM:618178","UMLS:C4748552","MEDGEN:1648305"],"synonyms":[{"name":"NEPHROTIC SYNDROME, TYPE 19","type":"related"},{"name":"NPHS19","type":"related"}],"termid":"MONDO:0032582","terms_by_termid":{"MONDO:0032582":null},"xrefs":{"Monarch":{"xref_id":"0032582"}}}


id: PBO:0077982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 4-1","termid":"PBO:0077982"}


id: PBO:0031266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis","termid":"PBO:0031266"}


id: PBO:0042454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 7","termid":"PBO:0042454"}


id: GO:0160107
data:
  {"annotated_genes":["SJAG_02386","SJAG_02637"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63002,114145],"is_not":false,"summary":null,"term":"GO:0160107"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(58) in tRNA + S-adenosyl-L-methionine = H+ + N(1)-methyladenosine(58) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0140101","GO:0003674","GO:0016741","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA (adenine(58)-N1)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:43152","Reactome:R-HSA-6787525","Reactome:R-HSA-6783492"],"synonyms":[{"name":"tRNA (adenine(58)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (m(1)A(58)) methyltransferase","type":"exact"},{"name":"tRNA m(1)A(58) methyltransferase","type":"exact"}],"termid":"GO:0160107","terms_by_termid":{"GO:0160107":null}}


id: GO:0031964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carcinine + H2O = histamine + beta-alanine. Carcinine is also known as N-beta-alanyl histamine.","definition_xrefs":["RHEA:73463","PMID:16299587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"beta-alanyl-histamine hydrolase activity","synonyms":[{"name":"carcinine hydrolase activity","type":"exact"}],"termid":"GO:0031964"}


id: PBO:0064809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R2 family member B","termid":"PBO:0064809"}


id: GO:0072359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the circulatory system over time, from its formation to the mature structure. The circulatory system is the organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.","definition_xrefs":["GOC:mah","UBERON:0001009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circulatory system development","secondary_identifiers":["GO:0072358"],"synonyms":[{"name":"cardiovascular system development","type":"narrow"}],"termid":"GO:0072359"}


id: MONDO:0004922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an impairment in the development of an individual's motor coordination skills; this impairment in motor development is not due to a medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental coordination disorder","secondary_identifiers":["SCTID:27544004","NCIT:C92561","ICD9:315.4","DOID:9923","MEDGEN:41511","MESH:D019957","UMLS:C0011757"],"synonyms":[{"name":"clumsy child syndrome","type":"exact"},{"name":"development coordination disorder","type":"exact"},{"name":"developmental dyspraxia","type":"exact"}],"termid":"MONDO:0004922","xrefs":{"Monarch":{"xref_id":"0004922"}}}


id: GO:0008380
data:
  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id: PBO:0040629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG3 associated nuclear protein","termid":"PBO:0040629"}


id: MONDO:0002445
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemoglobin c disease (obsolete MONDO:0002445)","termid":"MONDO:0002445","xrefs":{"Monarch":{"xref_id":"0002445"}}}


id: PBO:0067816
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 118","termid":"PBO:0067816"}


id: GO:1990056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation of an amino acid residue in a substrate protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP, thereby targeting the substrate to the proteasomal ubiquitin mediated protein catabolic process.","definition_xrefs":["PMID:21098119","PMID:21993622","PMID:23264631"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase activity required for targeting substrate to proteasomal ubiquitin-dependent protein catabolic process (obsolete GO:1990056)","synonyms":[{"name":"protein kinase activity required for targeting substrate to proteasomal ubiquitin-dependent protein catabolic process","type":"exact"}],"termid":"GO:1990056"}


id: PBO:0049113
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 176","termid":"PBO:0049113"}


id: GO:0032463
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein homooligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein oligomerization","termid":"GO:0032460"},{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"negatively_regulates","term_name":"protein homooligomerization","termid":"GO:0051260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of protein homooligomerization","synonyms":[{"name":"down regulation of protein homooligomerization","type":"exact"},{"name":"down-regulation of protein homooligomerization","type":"exact"},{"name":"downregulation of protein homooligomerization","type":"exact"},{"name":"inhibition of protein homooligomerization","type":"narrow"}],"termid":"GO:0032463"}


id: PBO:0061912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily B member 1","termid":"PBO:0061912"}


id: PBO:0117004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL2RA antisense RNA 1","termid":"PBO:0117004"}


id: PBO:0091758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper exporter Ctr6","termid":"PBO:0091758"}


id: PBO:0051979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 2","termid":"PBO:0051979"}


id: PBO:0028060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_DNA_replication_during_vegetative_growth","termid":"PBO:0028060"}


id: PBO:0073981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 2","termid":"PBO:0073981"}


id: GO:0048613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, by which the anatomical structures of the ectodermal digestive tract are generated and organized.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic digestive tract morphogenesis","termid":"GO:0048557"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"},{"relation_name":"part_of","term_name":"embryonic ectodermal digestive tract development","termid":"GO:0048611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic ectodermal digestive tract morphogenesis","synonyms":[{"name":"embryonic ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048613"}


id: GO:0045289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the generalized reaction: luciferin + O2 = oxidized luciferin + CO2 + light. There may be additional substrates and reactants involved in the reaction. The reaction results in light emission as luciferin returns to the ground state after enzymatic oxidation.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"luciferin monooxygenase activity","synonyms":[{"name":"luciferase activity","type":"exact"},{"name":"luciferase monooxygenase activity","type":"related"}],"termid":"GO:0045289"}


id: GO:0008073
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67226],"is_not":false,"summary":null,"term":"GO:0008073"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ornithine decarboxylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ornithine decarboxylase regulator activity","termid":"GO:0042979"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0004857","GO:0030234","GO:0140678"],"is_obsolete":false,"name":"ornithine decarboxylase inhibitor activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0008073","terms_by_termid":{"GO:0008073":null}}


id: PBO:0056199
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA8 antisense RNA 1","termid":"PBO:0056199"}


id: GO:0098503
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing a 3' phosphate group from a DNA molecule.","definition_xrefs":["GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA 3' dephosphorylation (obsolete GO:0098503)","termid":"GO:0098503"}


id: SO:0001788
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An U-box is a conserved T-rich region upstream of a retroviral polypurine tract that is involved in PPT primer creation during reverse transcription.","definition_xrefs":["PMID:9649446","PMID:10556309","PMID:11577982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U_box","synonyms":[{"name":"U-box","type":"exact"}],"termid":"SO:0001788"}


id: PBO:0062984
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTGS2 antisense NFKB1 complex-mediated expression regulator RNA","termid":"PBO:0062984"}


id: GO:0070152
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling isoleucine to isoleucyl-tRNA in a mitochondrion, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucyl-tRNA aminoacylation","termid":"GO:0006428"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006520","GO:0008150","GO:0006399","GO:0140053"],"is_obsolete":false,"name":"mitochondrial isoleucyl-tRNA aminoacylation","termid":"GO:0070152"}


id: GO:0044853
data:
  {"annotated_genes":["SJAG_04001","SJAG_04620","SJAG_03536","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90392,91280,105208,120548],"is_not":false,"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane raft that is part of the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft","termid":"GO:0045121"},{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane raft","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044853","terms_by_termid":{"GO:0044853":null}}


id: GO:0097636
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:autophagy","GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of autophagosome membrane (obsolete GO:0097636)","synonyms":[{"name":"intrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"intrinsic to autophagic vacuole membrane","type":"narrow"}],"termid":"GO:0097636"}


id: PBO:0047177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 10","termid":"PBO:0047177"}


id: MONDO:0018107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete idiopathic recurrent and disabling cutaneous herpes (obsolete MONDO:0018107)","secondary_identifiers":["Orphanet:35061"],"termid":"MONDO:0018107","xrefs":{"Monarch":{"xref_id":"0018107"}}}


id: PBO:0071283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 6","termid":"PBO:0071283"}


id: GO:0110062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the angiotensin-activated signaling pathway.","definition_xrefs":["PMID:28784619","GOC:lf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of angiotensin-activated signaling pathway","termid":"GO:0110061"},{"relation_name":"negatively_regulates","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of angiotensin-activated signaling pathway","termid":"GO:0110062"}


id: PBO:0083577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps YFR035C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083577"}


id: PBO:0086717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene; contains multiple predicted transmembrane domains","termid":"PBO:0086717"}


id: GO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing entity that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete copper electron carrier (obsolete GO:0015003)","synonyms":[{"name":"copper electron carrier","type":"exact"}],"termid":"GO:0015003"}


id: GO:0017157
data:
  {"annotated_genes":["SJAG_02366","SJAG_04509","SJAG_00661","SJAG_03763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61855,89846,100345],"is_not":false,"summary":null,"term":"GO:0017157"},{"annotations":[102139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02366":null,"SJAG_03763":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of exocytosis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0017157","terms_by_termid":{"GO:0017157":null,"GO:0045921":null}}


id: PBO:0059428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardin related transcription factor B","termid":"PBO:0059428"}


id: PBO:0089503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain protein Sqs1","termid":"PBO:0089503"}


id: FYPO:0002853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-cysteine ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}


id: PBO:0068934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 177, pseudogene","termid":"PBO:0068934"}


id: GO:0045924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the willingness or readiness of a female to receive male advances.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female mating behavior","termid":"GO:0060180"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female receptivity","secondary_identifiers":["GO:0060181"],"synonyms":[{"name":"female receptivity","type":"related"}],"termid":"GO:0045924"}


id: MONDO:0017451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-syndromic brachydactyly that involves the manus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly","termid":"MONDO:0017424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic brachydactyly of fingers","secondary_identifiers":["Orphanet:294996"],"synonyms":[{"name":"manus non-syndromic brachydactyly","type":"exact"},{"name":"non-syndromic brachydactyly of manus","type":"exact"},{"name":"short fingers","type":"exact"}],"termid":"MONDO:0017451","xrefs":{"Monarch":{"xref_id":"0017451"}}}


id: FYPO:0005077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:17179073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"elongated cell during glucose starvation","synonyms":[{"name":"cell morphology, elongated cell during glucose starvation","type":"exact"},{"name":"elongated cell during glucose depletion","type":"exact"},{"name":"elongated cell during glucose deprivation","type":"exact"},{"name":"long cell during glucose starvation","type":"exact"}],"termid":"FYPO:0005077"}


id: PATO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000095 absolute drug sensitivity (obsolete PATO:0000095)","termid":"PATO:0000095"}


id: PBO:0060104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 5","termid":"PBO:0060104"}


id: GO:0043385
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mycotoxin, any poisonous substance produced by a fungus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"mycotoxin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mycotoxin metabolism","type":"exact"}],"termid":"GO:0043385","terms_by_termid":{"GO:0043387":null}}


id: GO:0006723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydrocarbons that make up the cuticle, the outer layer of some animals and plants, which acts to prevent water loss.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"},{"relation_name":"part_of","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle hydrocarbon biosynthetic process","synonyms":[{"name":"cuticle hydrocarbon anabolism","type":"exact"},{"name":"cuticle hydrocarbon biosynthesis","type":"exact"},{"name":"cuticle hydrocarbon formation","type":"exact"},{"name":"cuticle hydrocarbon synthesis","type":"exact"}],"termid":"GO:0006723"}


id: GO:0021695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cerebellar cortex over time, from its formation to the mature structure. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar cortex development","termid":"GO:0021695"}


id: PBO:0004499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2A (predicted)","termid":"PBO:0004499"}


id: GO:0006226
data:
  {"annotated_genes":["SJAG_03771","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71800,81371],"is_not":false,"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dUMP, deoxyuridine monophosphate (2'-deoxyuridine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dUMP metabolic process","termid":"GO:0046078"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dUMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dUMP anabolism","type":"exact"},{"name":"dUMP biosynthesis","type":"exact"},{"name":"dUMP formation","type":"exact"},{"name":"dUMP synthesis","type":"exact"}],"termid":"GO:0006226","terms_by_termid":{"GO:0006226":null}}


id: GO:0018284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a protein via tetrakis-L-cysteinyl iron (there is no exogenous sulfur, so this modification by itself does not produce an iron-sulfur protein).","definition_xrefs":["RESID:AA0136"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into protein via tetrakis-L-cysteinyl iron (obsolete GO:0018284)","termid":"GO:0018284"}


id: PBO:0119741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRC complex subunit Get4","termid":"PBO:0119741"}


id: GO:0003301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division. This process contributes to the developmental growth of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physiological muscle hypertrophy","termid":"GO:0003298"},{"relation_name":"is_a","term_name":"cardiac muscle hypertrophy","termid":"GO:0003300"},{"relation_name":"part_of","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"physiological cardiac muscle hypertrophy","termid":"GO:0003301"}


id: PBO:0079812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2AF homology motif kinase 1","termid":"PBO:0079812"}


id: PBO:0029933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_salt_stress","termid":"PBO:0029933"}


id: GO:0047539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a 2-deoxy-alpha-D-glucoside = 2-deoxy-D-glucose + an alcohol.","definition_xrefs":["MetaCyc:2-DEOXYGLUCOSIDASE-RXN","EC:3.2.1.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-deoxyglucosidase activity","secondary_identifiers":["RHEA:15317"],"synonyms":[{"name":"2-deoxy-alpha-D-glucosidase activity","type":"related"},{"name":"2-deoxy-alpha-D-glucoside deoxyglucohydrolase activity","type":"related"},{"name":"2-deoxy-alpha-glucosidase activity","type":"related"}],"termid":"GO:0047539"}


id: GO:0010851
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of an enzyme that catalyzes a ring closure reaction.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"cyclase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010851","terms_by_termid":{"GO:0010856":null}}


id: PBO:0081639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF566 antisense RNA 1","termid":"PBO:0081639"}


id: PBO:0051599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 23 subunit alpha","termid":"PBO:0051599"}


id: PBO:0085061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p","termid":"PBO:0085061"}


id: MONDO:0012728
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86954,86955],"is_not":false,"summary":null,"term":"MONDO:0012728"}]},"cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the GPD1L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2673193","MESH:C567087","DOID:0110219","GARD:15526","MEDGEN:382031","OMIM:611777"],"synonyms":[{"name":"BRGDA2","type":"exact"},{"name":"Brugada syndrome 2","type":"exact"},{"name":"Brugada syndrome caused by mutation in GPD1L","type":"exact"},{"name":"Brugada syndrome type 2","type":"exact"},{"name":"GPD1L Brugada syndrome","type":"exact"}],"termid":"MONDO:0012728","terms_by_termid":{"MONDO:0012728":null},"xrefs":{"Monarch":{"xref_id":"0012728"}}}


id: MONDO:0003335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyneuropathy that is persistent or long-standing in nature.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"chronic polyneuropathy","secondary_identifiers":["DOID:5221","UMLS:C1167650","MEDGEN:223911","NCIT:C36071"],"synonyms":[{"name":"polyneuropathy, chronic","type":"exact"}],"termid":"MONDO:0003335","xrefs":{"Monarch":{"xref_id":"0003335"}}}


id: GO:0150075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["GOC:bc","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein-glutamine gamma-glutamyltransferase activity (obsolete GO:0150075)","termid":"GO:0150075"}


id: PBO:0086249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that mediates sphingolipid homeostasis; evolutionarily conserved, required for resistance to agents that induce unfolded protein response; Orm1p and Orm2p together control membrane biogenesis by coordinating lipid homeostasis with protein quality control; protein abundance increases in response to DNA replication stress; ORM2 has a paralog, ORM1, that arose from the whole genome duplication","termid":"PBO:0086249"}


id: GO:0031244
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the cell outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of cell outer membrane","synonyms":[{"name":"extrinsic to cell outer membrane","type":"narrow"}],"termid":"GO:0031244"}


id: GO:0047215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (indol-3-yl)acetate + UDP-D-glucose = 1-O-(indol-3-ylacetyl)-beta-D-glucose + UDP.","definition_xrefs":["RHEA:14921","EC:2.4.1.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetate beta-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03094","MetaCyc:2.4.1.121-RXN"],"synonyms":[{"name":"IAA-Glu synthetase activity","type":"related"},{"name":"IAA-glucose synthase activity","type":"related"},{"name":"IAGlu synthase activity","type":"related"},{"name":"UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:auxin glucosyltransferase activity","type":"broad"},{"name":"UDP-glucose:indol-3-acetic acid glucosyltransferase activity","type":"exact"},{"name":"UDP-glucose:indol-3-ylacetate glucosyl-transferase activity","type":"related"},{"name":"UDP-glucose:indol-3-ylacetate glucosyltransferase activity","type":"related"},{"name":"UDPG-indol-3-ylacetyl glucosyl transferase activity","type":"related"},{"name":"UDPglucose:indole-3-acetate beta-D-glucosyltransferase activity","type":"related"},{"name":"indol-3-ylacetylglucose synthase activity","type":"related"},{"name":"uridine diphosphoglucose-indoleacetate glucosyltransferase activity","type":"related"}],"termid":"GO:0047215"}


id: PATO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000382 gender value (obsolete PATO:0000382)","termid":"PATO:0000382"}


id: GO:0016083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fusion of the synaptic vesicle with the postsynaptic membrane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle fusion (obsolete GO:0016083)","synonyms":[{"name":"synaptic vesicle fusion","type":"exact"}],"termid":"GO:0016083"}


id: FYPO:0001235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth in a cell population occurs to a lower extent than normal, i.e. the population stops growing earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"decreased extent of cell population growth","synonyms":[{"name":"reduced extent of cell population growth","type":"exact"}],"termid":"FYPO:0001235"}


id: GO:0140492
data:
  {"annotated_genes":["SJAG_01528","SJAG_00742","SJAG_03429","SJAG_04651","SJAG_02900","SJAG_04215","SJAG_03752","SJAG_02244","SJAG_03686","SJAG_01281","SJAG_00573","SJAG_00546","SJAG_02419","SJAG_00764","SJAG_02341","SJAG_00795","SJAG_01312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57577,64470,69977,76108,90443,96087,97253,98492,101826,106580,107599,107767,112324,115621,116808,117167,117239],"is_not":false,"summary":null,"term":"GO:0140492"}]},"cv_name":"molecular_function","definition":"An metal-dependent isopeptidase activity that cleaves ubiquitin from a target protein to which it is conjugated.","definition_xrefs":["PMID:19489724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallopeptidase activity","termid":"GO:0008237"},{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00546":null,"SJAG_00573":null,"SJAG_00742":null,"SJAG_00764":null,"SJAG_00795":null,"SJAG_01281":null,"SJAG_01312":null,"SJAG_01528":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02900":null,"SJAG_03429":null,"SJAG_03686":null,"SJAG_03752":null,"SJAG_04215":null,"SJAG_04651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0008233","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"metal-dependent deubiquitinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"metal-dependent ubiquitin-like hydrolase activity","type":"exact"},{"name":"metal-dependent ubiquitinyl-like hydrolase activity","type":"exact"}],"termid":"GO:0140492","terms_by_termid":{"GO:0140492":null}}


id: MONDO:1012747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any canine hereditary ataxia that occurs in dogs due to a mutation in the RAB24 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary ataxia, non-human animal","termid":"MONDO:1012959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine hereditary ataxia, RAB24-related, dog","secondary_identifiers":["OMIA:001913-9615"],"synonyms":[{"name":"ataxia, cerebellar, juvenile to adolescent, RAB24-related, dog","type":"exact"},{"name":"canine hereditary ataxia","type":"related"}],"termid":"MONDO:1012747","xrefs":{"Monarch":{"xref_id":"1012747"}}}


id: GO:0046421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate = pyruvate + succinate.","definition_xrefs":["EC:4.1.3.30","RHEA:16809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"methylisocitrate lyase activity","secondary_identifiers":["KEGG_REACTION:R00409","MetaCyc:METHYLISOCITRATE-LYASE-RXN"],"synonyms":[{"name":"(2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate pyruvate-lyase (succinate-forming)","type":"related"},{"name":"(2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate pyruvate-lyase activity","type":"related"},{"name":"2-methylisocitrate lyase activity","type":"exact"},{"name":"MICL","type":"related"}],"termid":"GO:0046421"}


id: FYPO:0003316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the growing cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to growing cell tip","synonyms":[{"name":"normal protein localisation to growing cell tip","type":"exact"},{"name":"normal protein localization to growing cell end","type":"exact"},{"name":"normal protein localization to growing cell tip during mitotic cell cycle","type":"related"},{"name":"normal protein localization to growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003316"}


id: GO:0042959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alkanesulfonate from one side of a membrane to the other according to the reaction: ATP + H2O + alkanesulfonate(out) = ADP + phosphate + alkanesulfonate(in).","definition_xrefs":["PMID:10506196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ATPase-coupled organic acid transmembrane transporter activity","termid":"GO:0033283"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type alkanesulfonate transporter transporter activity","synonyms":[{"name":"alkanesulfonate transmembrane transporter activity","type":"broad"},{"name":"alkanesulfonate transporter activity","type":"related"},{"name":"alkanesulphonate transporter activity","type":"exact"}],"termid":"GO:0042959"}


id: PBO:0082459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX box containing protein of unknown function; proposed to be involved in the RAS/cAMP signaling pathway","termid":"PBO:0082459"}


id: PBO:0078417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-3","termid":"PBO:0078417"}


id: PBO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX17 pseudogene 1","termid":"PBO:0043768"}


id: PBO:0045453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAQ-box RNA dependent ATPase 1","termid":"PBO:0045453"}


id: PBO:0081288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 72A, pseudogene","termid":"PBO:0081288"}


id: PBO:0063324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCMTD1 divergent transcript","termid":"PBO:0063324"}


id: PBO:0063461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor C","termid":"PBO:0063461"}


id: PBO:0078036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 26","termid":"PBO:0078036"}


id: PBO:0087663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the import motor (PAM complex); the PAM complex is a  component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); forms a 1:1 subcomplex with Pam18p and inhibits its cochaperone activity; contains a J-like domain","termid":"PBO:0087663"}


id: PATO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's having thin, tail-like projections extending outwards from the cell body.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Ciliated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliatedness","termid":"PATO:0001408"}


id: MONDO:0013155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type B","termid":"MONDO:0000172"},{"relation_name":"is_a","term_name":"myopathy caused by variation in POMGNT1","termid":"MONDO:0700068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0002320","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3","secondary_identifiers":["GARD:18455","UMLS:C3150412","MEDGEN:461762","OMIM:613151","DOID:0112378"],"synonyms":[{"name":"MDDGB3","type":"related"},{"name":"congenital muscular dystrophy-POMGNT1 related","type":"exact"},{"name":"muscular dystrophy, congenital, POMGNT1-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B, 3","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type B, 3","type":"related"}],"termid":"MONDO:0013155","xrefs":{"Monarch":{"xref_id":"0013155"}}}


id: GO:0060611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammary gland fat over time, from its formation to the mature structure. The mammary fat is an adipose structure in the gland that is invaded by the mammary ducts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adipose tissue development","termid":"GO:0060612"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland fat development","termid":"GO:0060611"}


id: PBO:0071530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 33","termid":"PBO:0071530"}


id: FYECO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium oleate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na oleate","synonyms":[{"name":"sodium oleate added","type":"exact"}],"termid":"FYECO:0000089"}


id: PR:Q8WZK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC839.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8WZK4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.03c","synonyms":[{"name":"Spom972h-SPBC839.03c","type":"exact"}],"termid":"PR:Q8WZK4"}


id: PBO:0031213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype,_adaptive_response_to_loss_of_mtDNA_(obsolete_FYPO:0000221)","termid":"PBO:0031213"}


id: GO:2001291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving codeine, an alkaloid found in the opium poppy, Papaver somniferum var. album. Codeine has analgesic, anti-tussive and anti-diarrhoeal properties.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"codeine metabolic process","synonyms":[{"name":"codeine metabolism","type":"exact"}],"termid":"GO:2001291"}


id: FYPO:0002933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snoRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased mature snoRNA level","synonyms":[{"name":"increased mature small nucleolar RNA level","type":"exact"},{"name":"increased mature snoRNA accumulation","type":"related"},{"name":"increased mature snoRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature snoRNA level during vegetative growth","type":"exact"},{"name":"increased mature snoRNA transcript level","type":"broad"},{"name":"increased snoRNA level","type":"broad"}],"termid":"FYPO:0002933"}


id: SO:0000889
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is paternally imprinted.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"paternally_imprinted","termid":"SO:0000136"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally_imprinted_gene","synonyms":[{"name":"paternally imprinted gene","type":"exact"}],"termid":"SO:0000889"}


id: MONDO:0020543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant steroid cell tumor of the ovary, not otherwise specified is a rare malignant sex cord stromal tumor of ovary of unknown histological lineage, occurring in adult women, characterized, in most cases, by manifestations of androgen excess (hirsutism, hair loss, amenorrhea, or oligomenorrhea) and, occasionally, Cushing syndrome.","definition_xrefs":["Orphanet:99917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant sex cord stromal tumor of ovary","termid":"MONDO:0018172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"theca steroid-producing cell malignant tumor of ovary, not further specified","secondary_identifiers":["UMLS:C4274494","GARD:19708","MEDGEN:904268"],"synonyms":[{"name":"theca (steroid-producing) cell cancer, not further specified","type":"exact"}],"termid":"MONDO:0020543","xrefs":{"Monarch":{"xref_id":"0020543"}}}


id: PBO:0040016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 5","termid":"PBO:0040016"}


id: MONDO:0010269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coats disease (CD) is an idiopathic disorder characterized by retinal telangiectasia with deposition of intraretinal or subretinal exudates, potentially leading to retinal detachment and unilateral blindness. CD is classically an isolated and unilateral condition affecting otherwise healthy young children.","definition_xrefs":["Orphanet:190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal telangiectasia","termid":"MONDO:0004348"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Coats disease","secondary_identifiers":["MedDRA:10015901","GARD:6121","icd11.foundation:2032707885","ICD9:362.12","MEDGEN:102319","NORD:981","SCTID:360455002","MESH:D058456","DOID:7765","OMIM:300216","UMLS:C0154832"],"synonyms":[{"name":"Coats disease","type":"exact"},{"name":"Coats' disease","type":"exact"},{"name":"Coats' syndrome","type":"exact"},{"name":"Leber miliary aneurysm","type":"exact"},{"name":"congenital retinal telangiectasia","type":"exact"},{"name":"exudative retinopathy","type":"exact"},{"name":"retinal telangiectasis","type":"related"}],"termid":"MONDO:0010269","xrefs":{"Monarch":{"xref_id":"0010269"}}}


id: PBO:0080276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 39 pseudogene","termid":"PBO:0080276"}


id: GO:0045926
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"growth","termid":"GO:0040007"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of growth","type":"exact"},{"name":"down-regulation of growth","type":"exact"},{"name":"downregulation of growth","type":"exact"},{"name":"inhibition of growth","type":"narrow"}],"termid":"GO:0045926","terms_by_termid":{"GO:0051517":null}}


id: PBO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetamidase (predicted)","termid":"PBO:0003026"}


id: PBO:0060598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit D3","termid":"PBO:0060598"}


id: PBO:0060501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4","termid":"PBO:0060501"}


id: PBO:0054308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1700","termid":"PBO:0054308"}


id: PBO:0057558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 676","termid":"PBO:0057558"}


id: GO:1904049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spontaneous neurotransmitter secretion.","definition_xrefs":["GOC:pad","GOC:TermGenie","GOC:PARL","PMID:22314364","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"regulation of spontaneous neurotransmitter secretion","termid":"GO:1904048"},{"relation_name":"negatively_regulates","term_name":"spontaneous neurotransmitter secretion","termid":"GO:0061669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of spontaneous neurotransmitter secretion","synonyms":[{"name":"down regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"down regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"down-regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"down-regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"downregulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"downregulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"inhibition of spontaneous neurotransmitter secretion","type":"narrow"},{"name":"inhibition of stimulus-independent neurotransmitter secretion","type":"narrow"},{"name":"negative regulation of stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:1904049"}


id: GO:1903667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["PMID:24390142","GOC:TermGenie","PMID:22711818","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chemorepellent activity (obsolete GO:1903667)","synonyms":[{"name":"regulation of chemorepellant activity","type":"exact"}],"termid":"GO:1903667"}


id: MONDO:0004055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute inflammation of lacrimal passage","secondary_identifiers":["UMLS:C0339129","DOID:6970","MEDGEN:572973","ICD9:375.3","SCTID:302900006"],"termid":"MONDO:0004055","xrefs":{"Monarch":{"xref_id":"0004055"}}}


id: GO:0004074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bilirubin IXalpha + NAD(P)+ = biliverdin IXalpha + NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"biliverdin reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:BILIVERDIN-REDUCTASE-RXN","Reactome:R-HSA-189384"],"synonyms":[{"name":"bilirubin:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"biliverdin reductase [NAD(P)+] activity","type":"exact"}],"termid":"GO:0004074"}


id: MONDO:0013647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary microcephaly-epilepsy-permanent neonatal diabetes syndrome (obsolete MONDO:0013647)","termid":"MONDO:0013647","xrefs":{"Monarch":{"xref_id":"0013647"}}}


id: MONDO:0054764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0005066"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 8","secondary_identifiers":["UMLS:C4693587","MEDGEN:1645224","OMIM:617917"],"synonyms":[{"name":"NBIA8","type":"related"},{"name":"neurodegeneration with brain iron accumulation 8","type":"exact"}],"termid":"MONDO:0054764","xrefs":{"Monarch":{"xref_id":"0054764"}}}


id: SO:1000126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that affects the secondary structure (folding) of the RNA transcript molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000126 sequence_variant_affecting_transcript_secondary_structure (obsolete SO:1000126)","synonyms":[{"name":"mutation affecting transcript secondary structure","type":"related"},{"name":"sequence variant affecting transcript secondary structure","type":"exact"}],"termid":"SO:1000126"}


id: GO:1903533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"protein targeting","termid":"GO:0006605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006605"],"is_obsolete":false,"name":"regulation of protein targeting","synonyms":[{"name":"regulation of nascent polypeptide association","type":"related"},{"name":"regulation of protein sorting along secretory pathway","type":"narrow"}],"termid":"GO:1903533"}


id: PBO:0076051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin domain containing 1","termid":"PBO:0076051"}


id: PBO:0028095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_replication_origin_binding","termid":"PBO:0028095"}


id: PBO:0005547
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.48","termid":"PBO:0005547"}


id: GO:1905215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of RNA binding.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of RNA binding (obsolete GO:1905215)","synonyms":[{"name":"down regulation of RNA binding","type":"exact"},{"name":"down-regulation of RNA binding","type":"exact"},{"name":"downregulation of RNA binding","type":"exact"},{"name":"inhibition of RNA binding","type":"narrow"}],"termid":"GO:1905215"}


id: GO:0072328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alkene binding","termid":"GO:0072328"}


id: PBO:0080652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 pseudogene 1","termid":"PBO:0080652"}


id: PR:000085731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:19362535","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K9),UnPhos(S10)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K9-methylated and unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"exact"},{"name":"hht3/Me(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085731"}


id: PBO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.83","termid":"PBO:0001844"}


id: PBO:0081870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 812, pseudogene","termid":"PBO:0081870"}


id: GO:0071234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylalanine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to phenylalanine","termid":"GO:0080053"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phenylalanine","termid":"GO:0071234"}


id: PBO:0114072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily A member 2, pseudogene","termid":"PBO:0114072"}


id: PBO:0068875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 115, pseudogene","termid":"PBO:0068875"}


id: GO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"benzoate transport","termid":"GO:0042919"}


id: GO:1905916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GO_REF:0000058","PMID:25089138","GOC:BHF_miRNA","GOC:BHF","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of phenotypic switching","termid":"GO:1900240"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"negatively_regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation involved in phenotypic switching","synonyms":[{"name":"down regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"inhibition of cell differentiation involved in phenotypic switching","type":"narrow"}],"termid":"GO:1905916"}


id: GO:0098842
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An early endosome of the postsynapse. It acts as the major sorting station on the endocytic pathway, targeting neurotransmitter receptors for degregation or recycling.","definition_xrefs":["PMID:24727350","PMID:19603039","PMID:20820847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early endosome","termid":"GO:0005769"},{"relation_name":"is_a","term_name":"postsynaptic endosome","termid":"GO:0098845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"postsynaptic early endosome","termid":"GO:0098842"}


id: PBO:0087706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; contributes to both positive and negative transcriptional regulation; dispensible for basal transcription","termid":"PBO:0087706"}


id: GO:0017029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete lysosomal protein stabilization (obsolete GO:0017029)","synonyms":[{"name":"lysosomal protein stabilization","type":"exact"}],"termid":"GO:0017029"}


id: PBO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsinogen B2","termid":"PBO:0044189"}


id: GO:1990869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to chemokine","termid":"GO:1990868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chemokine","termid":"GO:1990869"}


id: PBO:0060448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1 subunit 1","termid":"PBO:0060448"}


id: PBO:0063748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 13","termid":"PBO:0063748"}


id: PBO:0075474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 25","termid":"PBO:0075474"}


id: GO:0180007
data:
  {"annotated_genes":["SJAG_02389","SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97788,99138],"is_not":false,"summary":null,"term":"GO:0180007"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-serine (consensus YSPTSPS)(position 5) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02389":null,"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0140096","GO:0003824","GO:0003674","GO:0004721"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II C-terminal domain S5 phosphatase activity","type":"exact"}],"termid":"GO:0180007","terms_by_termid":{"GO:0180007":null}}


id: PBO:0082641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of inositol phosphorylceramide (IPC) synthase; forms a complex with Aur1p and regulates its activity; required for IPC synthase complex localization to the Golgi; post-translationally processed by Kex2p; KEI1 is an essential gene","termid":"PBO:0082641"}


id: FYPO:0006027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cables than normal.","definition_xrefs":["PomBase:mah","PMID:11694585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"actin cables present in increased numbers","synonyms":[{"name":"actin cables present in increased numbers during mitotic cell cycle","type":"related"},{"name":"actin cables present in increased numbers during vegetative growth","type":"exact"},{"name":"extra actin cables present","type":"exact"},{"name":"formin-nucleated actin cables present in increased numbers","type":"exact"},{"name":"increased level of actin cables","type":"related"}],"termid":"FYPO:0006027"}


id: PBO:0048822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 7","termid":"PBO:0048822"}


id: GO:0044645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of complement activation in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation in another organism (obsolete GO:0044645)","synonyms":[{"name":"modulation of complement activation in other organism","type":"exact"},{"name":"regulation of complement activation in other organism","type":"exact"}],"termid":"GO:0044645"}


id: MONDO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant epithelial tumor of the female reproductive system characterized by the presence of glands and/or cysts lined by neoplastic cells that resemble endometrial cells.","definition_xrefs":["NCIT:C7113"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid tumor","secondary_identifiers":["MEDGEN:105374","UMLS:C0474809","DOID:3001"],"synonyms":[{"name":"endometrioid neoplasm","type":"exact"},{"name":"endometrioid neoplasm of female reproductive system","type":"exact"},{"name":"endometrioid neoplasm of the female reproductive system","type":"exact"},{"name":"endometrioid tumor","type":"exact"},{"name":"endometrioid tumor (morphologic abnormality)","type":"exact"},{"name":"endometrioid tumor of female reproductive system","type":"exact"},{"name":"endometrioid tumor of the female reproductive system","type":"exact"},{"name":"endometrioid tumour (morphologic abnormality)","type":"exact"},{"name":"endometrioid tumour of female reproductive system","type":"exact"},{"name":"endometrioid tumour of the female reproductive system","type":"exact"},{"name":"female reproductive endometrioid cancer","type":"related"},{"name":"female reproductive endometrioid neoplasm","type":"exact"},{"name":"female reproductive endometrioid tumor","type":"exact"},{"name":"female reproductive endometrioid tumour","type":"exact"}],"termid":"MONDO:0002480","xrefs":{"Monarch":{"xref_id":"0002480"}}}


id: MONDO:0971107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus","termid":"MONDO:0018072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"common arterial trunk with aortic dominance","secondary_identifiers":["UMLS:C4546067","MEDGEN:1622872","Orphanet:665044","icd11.foundation:551770382"],"termid":"MONDO:0971107","xrefs":{"Monarch":{"xref_id":"0971107"}}}


id: GO:0051894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of focal adhesion assembly","termid":"GO:0051893"},{"relation_name":"is_a","term_name":"positive regulation of cell-substrate junction organization","termid":"GO:0150117"},{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"positively_regulates","term_name":"focal adhesion assembly","termid":"GO:0048041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of focal adhesion assembly","synonyms":[{"name":"activation of focal adhesion formation","type":"narrow"},{"name":"stimulation of focal adhesion formation","type":"narrow"},{"name":"up regulation of focal adhesion formation","type":"exact"},{"name":"up-regulation of focal adhesion formation","type":"exact"},{"name":"upregulation of focal adhesion formation","type":"exact"}],"termid":"GO:0051894"}


id: PBO:0005842
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.9","termid":"PBO:0005842"}


id: MONDO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Papilloma's are benign epithelial neoplasms that produce visible warty projections from epithelial surfaces. Papilloma's of the urethra typically occur just within or on the external meatus. - 2003","definition_xrefs":["NCIT:C5061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"},{"relation_name":"is_a","term_name":"benign urethral neoplasm","termid":"MONDO:0004177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral urothelial papilloma","secondary_identifiers":["DOID:2140","UMLS:C1519826","MEDGEN:275549"],"synonyms":[{"name":"urethra urothelial papilloma","type":"exact"},{"name":"urethral urothelial papilloma","type":"exact"}],"termid":"MONDO:0002221","xrefs":{"Monarch":{"xref_id":"0002221"}}}


id: GO:0072588
data:
  {"annotated_genes":["SJAG_04754","SJAG_00083","SJAG_01234","SJAG_00566"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[82171,76393,79502,59698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031429"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains an RNA of the box H/ACA type and the four core proteins dyskerin, NOP10, NHP2, and GAR1 (human protein nomenclature). RNA pseudouridylation (isomerization of uridine to pseudouridine) is the major, and most likely the ancestral, function of H/ACA RNPs. Pseudouridylation targets include both large and small ribosomal RNAs (rRNAs), and small nuclear RNA (U2 snRNA). In addition to these catalytic H/ACA RNPs, a less abundant but more diverse class of structural H/ACA RNPs exists, which does not have pseudouridylation activity. These include the vertebrate telomerase RNP complex.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:BHF_telomerase","PMID:17284456","GOC:vw","PMID:20227365","GOC:krc","GOC:jbu","PMID:25590339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA-containing ribonucleoprotein complex","termid":"GO:0005732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"box H/ACA RNP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null},"synonyms":[{"name":"box H/ACA snoRNP pseudouridylase complex","type":"related"},{"name":"sRNP complex","type":"narrow"}],"termid":"GO:0072588","terms_by_termid":{"GO:0031429":null}}


id: MONDO:0012213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, complex type of hereditary spastic paraplegia characterized by the onset in childhood/adolescence (ages 2-19) of progressive spastic paraplegia associated mainly with mild to moderate cognitive impairment and developmental delay, cerebellar ataxia, dysarthria, and peripheral neuropathy. Less commonly reported manifestations include skeletal abnormalities (i.e. pes cavus, scoliosis), dyskinesia, dystonia, cataracts, cerebellar signs (i.e. saccadic dysfunction, nystagmus, dysmetria), bladder disturbances, and behavioral problems. SPG26 is caused by mutations in the B4GALNT1 gene (12q13.3), encoding Beta-1, 4 N-acetylgalactosaminyltransferase 1.","definition_xrefs":["Orphanet:101006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 26","secondary_identifiers":["MEDGEN:373138","MESH:C536862","GARD:9587","OMIM:609195","SCTID:726607007","UMLS:C1836632","DOID:0110777"],"synonyms":[{"name":"GM2 synthase deficiency","type":"exact"},{"name":"SPG26","type":"exact"},{"name":"autosomal recessive spastic paraplegia 26","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 26","type":"exact"},{"name":"hereditary spastic paraplegia type 26","type":"exact"},{"name":"spastic paraplegia 26","type":"related"},{"name":"spastic paraplegia 26, autosomal recessive","type":"related"}],"termid":"MONDO:0012213","xrefs":{"Monarch":{"xref_id":"0012213"}}}


id: MONDO:0003703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uterine corpus leiomyomatosis (obsolete MONDO:0003703)","termid":"MONDO:0003703","xrefs":{"Monarch":{"xref_id":"0003703"}}}


id: PBO:0089423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator Rad52 (previously Rad22)","termid":"PBO:0089423"}


id: MONDO:0005387
data:
  {"annotated_genes":["SJAG_04114","SJAG_04703","SJAG_02339","SJAG_03418","SJAG_04738","SJAG_02643","SJAG_02954","SJAG_03051","SJAG_02690","SJAG_03720","SJAG_04950","SJAG_03698","SJAG_02294","SJAG_00103","SJAG_00377","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[87876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[88887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[87553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[88316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[89147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[87920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[86959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976232"},{"annotations":[87539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[88333,88334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[87624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[88030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[88950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[88522,88521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"Absent or premature cessation of ovarian function due to a pathologic process originating within the ovaries.","definition_xrefs":["NCIT:C113352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian dysfunction","termid":"MONDO:0001889"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02643":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"primary ovarian failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:5426","EFO:0004266","SCTID:65846009","MESH:D016649","ICD10CM:E28.3","SCTID:370999003","UMLS:C0085215","ICD9:256.39","MEDGEN:38820","NANDO:2100139","ICD9:253.4","Orphanet:619"],"synonyms":[{"name":"female hypergonadotropic hypogonadism","type":"related"},{"name":"hypergonadotrophic ovarian failure","type":"related"},{"name":"hypergonadotropic hypogonadism","type":"related"},{"name":"hypergonadotropic hypogonadism (female)","type":"related"},{"name":"premature menopause","type":"related"},{"name":"premature ovarian failure","type":"related"},{"name":"premature ovarian insufficiency","type":"related"},{"name":"primary female hypogonadism","type":"related"},{"name":"primary ovarian failure","type":"exact"},{"name":"primary ovarian insufficiency","type":"exact"}],"termid":"MONDO:0005387","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null,"MONDO:0976232":null},"xrefs":{"Monarch":{"xref_id":"0005387"}}}


id: PATO:0000700
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's irregular surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rough","secondary_identifiers":["PATO:0001616"],"synonyms":[{"name":"coarse","type":"exact"}],"termid":"PATO:0000700"}


id: PBO:0029273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_MCB_promoters_during_cellular_response_to_hydroxyurea","termid":"PBO:0029273"}


id: PBO:0048099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin mitochondrial","termid":"PBO:0048099"}


id: MOD:00081
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamate 5-methyl ester.","definition_xrefs":["OMSSA:70","PubMed:16888","Unimod:34#E","RESID:AA0072#GLU","DeltaMass:167","OMSSA:17","PubMed:6300110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamic acid 5-methyl ester","termid":"MOD:01453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-glutamic acid 5-methyl ester (Glu)","synonyms":[{"name":"(2S)-2-amino-5-methoxy-5-oxopentanoic acid","type":"exact"},{"name":"(5)-methyl L-hydrogen glutamate","type":"exact"},{"name":"2-aminopentanedioic acid 5-methyl ester","type":"exact"},{"name":"5-methyl L-2-aminoglutarate","type":"exact"},{"name":"5-methyl L-glutamate","type":"exact"},{"name":"5-methyl esterified L-glutamic acid","type":"exact"},{"name":"L-glutamic acid 5-methyl ester","type":"exact"},{"name":"MOD_RES Glutamate methyl ester (Glu)","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"O-methyl Glutamyl","type":"exact"},{"name":"O5MeGlu","type":"exact"},{"name":"glutamic acid 5-methyl ester","type":"exact"},{"name":"glutamic acid gamma-methyl ester","type":"exact"},{"name":"meestere","type":"exact"},{"name":"methyl ester","type":"related"},{"name":"methyle","type":"exact"}],"termid":"MOD:00081"}


id: GO:1903574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cellular response to amino acid starvation.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000058","PMID:11381086","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to amino acid starvation","termid":"GO:1903832"},{"relation_name":"negatively_regulates","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to amino acid starvation","synonyms":[{"name":"down regulation of cellular response to amino acid starvation","type":"exact"},{"name":"down-regulation of cellular response to amino acid starvation","type":"exact"},{"name":"downregulation of cellular response to amino acid starvation","type":"exact"},{"name":"inhibition of cellular response to amino acid starvation","type":"narrow"}],"termid":"GO:1903574"}


id: PBO:0030763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_zinc_ion","termid":"PBO:0030763"}


id: GO:0160198
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62565],"is_not":false,"summary":null,"term":"GO:0160198"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,polycis-polyprenal+ H+ + NADPH = ditrans,polycis-dolichal+ NADP.","definition_xrefs":["PMID:38821050","RHEA:80727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"polyprenal reductase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-9937295","EC:1.3.1.94","MetaCyc:RXN-9971"],"termid":"GO:0160198","terms_by_termid":{"GO:0160198":null}}


id: FYPO:0004218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 20 of histone H4 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H4-K20 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H4 K20 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H4-K20 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H4K20me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H4 K20 trimethylation during vegetative growth","type":"exact"},{"name":"histone H4-K20 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H4-K20 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004218"}


id: PBO:0051666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein","termid":"PBO:0051666"}


id: PBO:0058379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4751","termid":"PBO:0058379"}


id: PBO:0038864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase RNA specific B1","termid":"PBO:0038864"}


id: PBO:0050149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 5","termid":"PBO:0050149"}


id: GO:0140820
data:
  {"annotated_genes":["SJAG_03528","SJAG_00328","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[106270,76631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the cytosol into the Golgi apparatus of a cell.","definition_xrefs":["PMID:28373556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_01960":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cytosol to Golgi apparatus transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140820","terms_by_termid":{"GO:0036085":null,"GO:1904257":null}}


id: PATO:0001387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An aneuploidy quality inhering in a bearer by virtue of the bearer's containing only two chromosome from a pair in a cell's nucleus.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Disomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"PATO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disomy","termid":"PATO:0001387"}


id: PATO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000711 absolute time value (obsolete PATO:0000711)","termid":"PATO:0000711"}


id: MONDO:0020521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, arthrochalasia type","termid":"MONDO:0007525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome type 7A","secondary_identifiers":["UMLS:C3508773","icd11.foundation:165998215","MEDGEN:854083","Orphanet:99875"],"synonyms":[{"name":"EDS VIIA","type":"exact"}],"termid":"MONDO:0020521","xrefs":{"Monarch":{"xref_id":"0020521"}}}


id: PBO:0003199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Histidine","termid":"PBO:0003199"}


id: GO:0098578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A condensed form of chromatin that is associated with an inactivated sex chromosome and which is responsible for its inactivation.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromatin","termid":"GO:0001739"},{"relation_name":"part_of","term_name":"inactive sex chromosome","termid":"GO:0098577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"condensed chromatin of inactivated sex chromosome","termid":"GO:0098578"}


id: GO:1903951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of AV node cell action potential.","definition_xrefs":["GOC:TermGenie","GOC:nc","GOC:BHF","PMID:25281747","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of action potential","termid":"GO:0045760"},{"relation_name":"is_a","term_name":"regulation of AV node cell action potential","termid":"GO:0098904"},{"relation_name":"positively_regulates","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of AV node cell action potential","synonyms":[{"name":"activation of AV node cardiac muscle cell action potential","type":"narrow"},{"name":"activation of AV node cell action potential","type":"narrow"},{"name":"activation of atrioventricular node cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of AV node cell action potential","type":"exact"},{"name":"up regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of AV node cell action potential","type":"exact"},{"name":"up-regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of AV node cell action potential","type":"exact"},{"name":"upregulation of atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903951"}


id: GO:0034427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the mRNA transcript body that occurs when the 3' end is not protected by a 3'-poly(A) tail; degradation proceeds in the 3' to 5' direction.","definition_xrefs":["GOC:krc","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (obsolete GO:0034427)","termid":"GO:0034427"}


id: MONDO:0012587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 7","secondary_identifiers":["MEDGEN:370258","OMIM:610948","UMLS:C1970439"],"synonyms":[{"name":"Hyt7","type":"related"},{"name":"hypertension, essential, susceptibility to, 7","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 7","type":"exact"}],"termid":"MONDO:0012587","xrefs":{"Monarch":{"xref_id":"0012587"}}}


id: PBO:0053806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1065","termid":"PBO:0053806"}


id: MONDO:0022435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complication of poorly controlled type 1 diabetes mellitus in children characterized by linear growth impairment, glycogenic hepatopathy, and Cushingoid features.","definition_xrefs":["NCIT:C130997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mauriac syndrome","secondary_identifiers":["GTR:AN0543890","ICD9:258.1","GTR:AN0543843","MEDGEN:526123","SCTID:80660001","UMLS:C0221005"],"synonyms":[{"name":"Mauriac syndrome","type":"exact"},{"name":"Mauriac's syndrome","type":"exact"},{"name":"dwarfism-hepatomegaly-obesity-juvenile diabetes syndrome","type":"related"}],"termid":"MONDO:0022435","xrefs":{"Monarch":{"xref_id":"0022435"}}}


id: GO:0033703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta-hydroxy-5-beta-pregnane-20-one + NADP+ = 5-beta-pregnan-3,20-dione + H+ + NADPH.","definition_xrefs":["RHEA:22944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-beta-hydroxy-5-beta-steroid dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R06166","MetaCyc:1.1.1.277-RXN","EC:1.1.1.277"],"synonyms":[{"name":"3beta-hydroxy-5beta-steroid:NADP+ 3-oxidoreductase activity","type":"related"},{"name":"3beta-hydroxysteroid 5beta-oxidoreductase activity","type":"related"},{"name":"3beta-hydroxysteroid 5beta-progesterone oxidoreductase activity","type":"related"}],"termid":"GO:0033703"}


id: GO:0009306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of proteins from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"establishment of protein localization to extracellular region","termid":"GO:0035592"},{"relation_name":"is_a","term_name":"protein localization to extracellular region","termid":"GO:0071692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein secretion","secondary_identifiers":["GO:0045166","GO:0045731"],"synonyms":[{"name":"glycoprotein secretion","type":"narrow"},{"name":"protein secretion during cell fate commitment","type":"narrow"},{"name":"protein secretion resulting in cell fate commitment","type":"narrow"}],"termid":"GO:0009306"}


id: MONDO:0021285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the urethra.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"carcinoma of urethra","termid":"MONDO:0021327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of urethra","secondary_identifiers":["ICD9:233.9","MEDGEN:1661236","SCTID:92784007","UMLS:C4721449","NCIT:C4531"],"synonyms":[{"name":"carcinoma in situ of the urethra","type":"exact"},{"name":"carcinoma in situ of urethra","type":"exact"},{"name":"stage 0 urethra carcinoma","type":"exact"},{"name":"stage 0is carcinoma of the urethra","type":"exact"},{"name":"stage 0is carcinoma of urethra","type":"exact"},{"name":"stage 0is urethra carcinoma","type":"exact"},{"name":"stage 0is urethral cancer","type":"exact"},{"name":"stage 0is urethral cancer aJCC v7","type":"exact"},{"name":"stage 0is urethral carcinoma","type":"exact"},{"name":"urethra carcinoma in situ","type":"exact"},{"name":"urethra in situ carcinoma","type":"exact"},{"name":"urethral carcinoma in situ","type":"exact"}],"termid":"MONDO:0021285","xrefs":{"Monarch":{"xref_id":"0021285"}}}


id: GO:0048296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0010467"],"is_obsolete":false,"name":"regulation of isotype switching to IgA isotypes","synonyms":[{"name":"regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"regulation of class switching to IgA isotypes","type":"exact"},{"name":"regulation of isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048296"}


id: MONDO:0859221
data:
  {"annotated_genes":["SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89204],"is_not":false,"summary":null,"term":"MONDO:0859221"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Yoon-Bellen neurodevelopmental syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070468","OMIM:619701","MEDGEN:1794276","UMLS:C5562066"],"termid":"MONDO:0859221","terms_by_termid":{"MONDO:0859221":null},"xrefs":{"Monarch":{"xref_id":"0859221"}}}


id: PBO:0065742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal testis enriched protein 1","termid":"PBO:0065742"}


id: PBO:0086974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of protein phosphatase PP4; presence of Psy4p in the PP4 complex (along with catalytic subunit Pph3p and Psy2p) is required for dephosphorylation of the histone variant H2AX, but not for dephosphorylation of Rad53p, during recovery from the DNA damage checkpoint; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; required for cisplatin resistance; homolog of mammalian R2","termid":"PBO:0086974"}


id: PBO:0072568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras responsive element binding protein 1","termid":"PBO:0072568"}


id: PR:O42911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.04","synonyms":[{"name":"Spom972h-rsm25","type":"exact"}],"termid":"PR:O42911"}


id: PBO:0091355
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear Tos4 is a marker for early S phase","termid":"PBO:0091355"}


id: PBO:0063032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein interacting protein 2B","termid":"PBO:0063032"}


id: GO:0005846
data:
  {"annotated_genes":["SJAG_04360","SJAG_01830","SJAG_01064"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72329,75201,117371],"is_not":false,"summary":null,"term":"GO:0005846"}]},"cv_name":"cellular_component","definition":"A conserved heterodimeric protein complex that binds to the 5' terminal cap structure m7G(5')ppp(5')N of nascent eukaryotic RNA polymerase II transcripts such as pre-mRNA and U snRNA. The consists of proteins known as CBP20 and CBP80, binds to cap structures in the nucleus, and is involved in pre-mRNA splicing, 3'-end formation, and RNA nuclear export.","definition_xrefs":["PMID:16043498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding complex","termid":"GO:0034518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01064":null,"SJAG_01830":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear cap binding complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CBC","type":"related"},{"name":"NCBP-NIP1 complex","type":"narrow"},{"name":"mRNA cap binding complex","type":"narrow"},{"name":"nuclear CBC","type":"exact"},{"name":"snRNA cap binding complex","type":"narrow"}],"termid":"GO:0005846","terms_by_termid":{"GO:0005846":null}}


id: GO:0061086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K27 methylation (obsolete GO:0061086)","termid":"GO:0061086"}


id: GO:1904356
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomere maintenance via telomere lengthening.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:23959892","GO_REF:0000058","GOC:BHF_telomere","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"regulates","term_name":"telomere maintenance via telomere lengthening","termid":"GO:0010833"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"regulation of telomere maintenance via telomere lengthening","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1904356","terms_by_termid":{"GO:0032210":null}}


id: MOD:02020
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a timnodonoylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"timnodonoylated residue","termid":"MOD:02021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-timnodonoylated residue","termid":"MOD:02020"}


id: GO:0002127
data:
  {"annotated_genes":["SJAG_05249","SJAG_02099"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90208,95876],"is_not":false,"summary":null,"term":"GO:0002127"}]},"cv_name":"biological_process","definition":"The process in which the base of cytosine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the C5 position.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble cytosine modification","termid":"GO:0002101"},{"relation_name":"is_a","term_name":"tRNA C5-cytosine methylation","termid":"GO:0002946"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02099":null,"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA wobble base cytosine methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"wobble position m5C biosynthesis","type":"exact"}],"termid":"GO:0002127","terms_by_termid":{"GO:0002127":null}}


id: MONDO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cutaneous mastocytosis (obsolete MONDO:0002723)","synonyms":[{"name":"obsolete cutaneous mastocytosis (disease)","type":"exact"}],"termid":"MONDO:0002723","xrefs":{"Monarch":{"xref_id":"0002723"}}}


id: GO:1902308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of peptidyl-serine dephosphorylation.","definition_xrefs":["PMID:11953308","GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:rl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of peptidyl-serine dephosphorylation (obsolete GO:1902308)","termid":"GO:1902308"}


id: GO:1904913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["GOC:BHF_telomere","GOC:rph","GOC:TermGenie","PMID:26586433","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"regulation of establishment of macromolecular complex localization to telomere","type":"related"}],"termid":"GO:1904913"}


id: PATO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A paedomorphic growth quality which is due to an ealier offset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paedomorphic growth","termid":"PATO:0001749"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progenetic growth","termid":"PATO:0001751"}


id: GO:0061027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the development of the umbilical cord, from its formation to the mature structure. The umbilical cord is an organ or embryonic origin consisting of the 2 umbilical arteries and the one umbilical vein. The umbilical cord connects the cardiovascular system of the fetus to the mother via the placenta.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"umbilical cord development","termid":"GO:0061027"}


id: PBO:0039820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor guanine nucleotide exchange factor 1","termid":"PBO:0039820"}


id: MONDO:0000317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete foodborne botulism (obsolete MONDO:0000317)","termid":"MONDO:0000317","xrefs":{"Monarch":{"xref_id":"0000317"}}}


id: FYPO:0005270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to osmotic stress","termid":"FYPO:0005270"}


id: PBO:0038834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 7","termid":"PBO:0038834"}


id: MONDO:1012509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative suspensory ligament desmitis, non-human animal","termid":"MONDO:1011773"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative suspensory ligament desmitis, horse","secondary_identifiers":["OMIA:002086-9796"],"termid":"MONDO:1012509","xrefs":{"Monarch":{"xref_id":"1012509"}}}


id: GO:0072006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nephron over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron development","synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0072006"}


id: GO:0051614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of serotonin uptake","termid":"GO:0051612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inhibition of serotonin uptake","synonyms":[{"name":"inhibition of 5-HT uptake","type":"exact"},{"name":"inhibition of 5-hydroxytryptamine uptake","type":"exact"},{"name":"inhibition of 5HT uptake","type":"exact"},{"name":"inhibition of serotonin import","type":"exact"}],"termid":"GO:0051614"}


id: MONDO:0016788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Genetic hyperferritinemia without iron overload is a rare biological anomaly defined as high serum ferritin levels without elevations of transferrin saturation, tissue or serum iron and characterized by an apparently asymptomatic clinical phenotype.","definition_xrefs":["Orphanet:254704"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic hyperferritinemia without iron overload (obsolete MONDO:0016788)","secondary_identifiers":["SCTID:766929007"],"synonyms":[{"name":"benign hyperferritinemia","type":"exact"}],"termid":"MONDO:0016788","xrefs":{"Monarch":{"xref_id":"0016788"}}}


id: GO:1903773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of viral budding via host ESCRT complex.","definition_xrefs":["PMID:24878737","GOC:als","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral budding via host ESCRT complex","termid":"GO:1903772"},{"relation_name":"is_a","term_name":"negative regulation of viral life cycle","termid":"GO:1903901"},{"relation_name":"negatively_regulates","term_name":"viral budding via host ESCRT complex","termid":"GO:0039702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral budding via host ESCRT complex","synonyms":[{"name":"down regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"down regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"down-regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"down-regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"downregulation of viral budding through the ESCRT machinery","type":"related"},{"name":"downregulation of viral budding via host ESCRT complex","type":"exact"},{"name":"inhibition of viral budding through the ESCRT machinery","type":"related"},{"name":"inhibition of viral budding via host ESCRT complex","type":"narrow"},{"name":"negative regulation of viral budding through the ESCRT machinery","type":"related"}],"termid":"GO:1903773"}


id: PR:Q9P7P9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized isomerase C186.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.06","synonyms":[{"name":"Spom972h-SPAC186.06","type":"exact"}],"termid":"PR:Q9P7P9"}


id: PBO:0069935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1228, pseudogene","termid":"PBO:0069935"}


id: PBO:0055985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat transmembrane neuronal 3","termid":"PBO:0055985"}


id: MONDO:0014213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"},{"relation_name":"is_a","term_name":"CTCF-related neurodevelopmental disorder","termid":"MONDO:0700294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0700092","MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability-feeding difficulties-developmental delay-microcephaly syndrome","secondary_identifiers":["MEDGEN:816016","DOID:0070051","UMLS:C3809686","GARD:17566","OMIM:615502","Orphanet:363611"],"synonyms":[{"name":"MRD21","type":"exact"},{"name":"autosomal dominant intellectual disability 21","type":"exact"},{"name":"autosomal dominant mental retardation 21","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 21","type":"related"},{"name":"intellectual disability, autosomal dominant 21","type":"related"},{"name":"intellectual disability, autosomal dominant type 21","type":"exact"},{"name":"mental retardation, autosomal dominant 21","type":"related"},{"name":"mental retardation, autosomal dominant type 21","type":"exact"}],"termid":"MONDO:0014213","xrefs":{"Monarch":{"xref_id":"0014213"}}}


id: GO:1905296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell fate specification.","definition_xrefs":["GOC:rl","PMID:15073157","GOC:TermGenie","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of neural crest formation","termid":"GO:0090301"},{"relation_name":"is_a","term_name":"negative regulation of neural crest cell differentiation","termid":"GO:1905293"},{"relation_name":"is_a","term_name":"regulation of neural crest cell fate specification","termid":"GO:1905295"},{"relation_name":"negatively_regulates","term_name":"neural crest cell fate specification","termid":"GO:0014036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural crest cell fate specification","synonyms":[{"name":"down regulation of neural crest cell fate specification","type":"exact"},{"name":"down-regulation of neural crest cell fate specification","type":"exact"},{"name":"downregulation of neural crest cell fate specification","type":"exact"},{"name":"inhibition of neural crest cell fate specification","type":"narrow"}],"termid":"GO:1905296"}


id: FYPO:0001613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-aspartate measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular aspartate level","synonyms":[{"name":"decreased cellular L-aspartate level","type":"exact"},{"name":"decreased cellular aspartate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular aspartate level during vegetative growth","type":"exact"},{"name":"decreased cellular aspartic acid level","type":"related"},{"name":"decreased cellular level aspartate level","type":"exact"},{"name":"decreased level of aspartate in cell","type":"exact"},{"name":"reduced cellular aspartate level","type":"exact"},{"name":"reduced level of aspartate in cell","type":"exact"}],"termid":"FYPO:0001613"}


id: MONDO:0026724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paganini-Miozzo syndrome","secondary_identifiers":["MEDGEN:1683361","DOID:0111843","OMIM:301025","UMLS:C5193010"],"synonyms":[{"name":"MRXSPM","type":"related"},{"name":"PAGANINI-MIOZZO SYNDROME","type":"related"},{"name":"Paganini-Miozzo syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation, X-Linked, syndromic, Paganini-Miozzo type","type":"exact"}],"termid":"MONDO:0026724","xrefs":{"Monarch":{"xref_id":"0026724"}}}


id: MONDO:0015007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia, intellectual disability, nystagmus, and obesity","secondary_identifiers":["UMLS:C4284592","MEDGEN:924883","OMIM:617296","Orphanet:521390","GARD:17957"],"synonyms":[{"name":"SINO","type":"related"},{"name":"spastic paraplegia, intellectual disability, nystagmus, and obesity","type":"exact"}],"termid":"MONDO:0015007","xrefs":{"Monarch":{"xref_id":"0015007"}}}


id: PBO:0044489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 46 subfamily A member 1","termid":"PBO:0044489"}


id: MONDO:0016156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"qualitative or quantitative defects of FKRP","secondary_identifiers":["GARD:20403","MEDGEN:1842706","UMLS:C5680827","Orphanet:207119"],"termid":"MONDO:0016156","xrefs":{"Monarch":{"xref_id":"0016156"}}}


id: GO:0015761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which mannose is transported across a lipid bilayer, from one side of a membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"mannose transmembrane transport","synonyms":[{"name":"mannose transport","type":"related"}],"termid":"GO:0015761"}


id: GO:0003872
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79721],"is_not":false,"summary":null,"term":"GO:0003872"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose-6-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-phosphofructokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:16109","MetaCyc:6PFRUCTPHOS-RXN","Reactome:R-HSA-70467"],"synonyms":[{"name":"6-phosphofructokinase reduction","type":"exact"},{"name":"6-phosphofructose 1-kinase activity","type":"related"},{"name":"ATP-dependent phosphofructokinase activity","type":"related"},{"name":"ATP:D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"PFK","type":"related"},{"name":"fructose 6-phosphate kinase activity","type":"related"},{"name":"fructose 6-phosphokinase activity","type":"related"},{"name":"nucleotide triphosphate-dependent phosphofructokinase activity","type":"related"},{"name":"phospho-1,6-fructokinase activity","type":"related"},{"name":"phosphofructokinase (phosphorylating)","type":"related"},{"name":"phosphofructokinase I activity","type":"related"},{"name":"phosphohexokinase activity","type":"broad"}],"termid":"GO:0003872","terms_by_termid":{"GO:0003872":null}}


id: FYPO:0005891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased nuclease activity during nitrogen starvation","synonyms":[{"name":"decreased nuclease activity during nitrogen depletion","type":"exact"},{"name":"decreased nuclease activity during nitrogen deprivation","type":"exact"},{"name":"reduced nuclease activity during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005891"}


id: PR:O59748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD kinase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.13","synonyms":[{"name":"CTD kinase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTDK-I subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsc1","type":"exact"},{"name":"latrunculin sensitive cyclin knockout protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59748"}


id: GO:0033161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitogen-activated protein kinase kinase kinase kinase, a protein that can phosphorylate a MAP kinase kinase kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase binding","synonyms":[{"name":"MAPKKKK binding","type":"exact"}],"termid":"GO:0033161"}


id: GO:0036025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and transmembrane protease serine 11E (TMPRSS11E); formation of the complex inhibits the serine protease activity of transmembrane protease serine 11E.","definition_xrefs":["GOC:ans","PMID:15328353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-TMPRSS11E complex","synonyms":[{"name":"PCI-TMPRSS11E complex","type":"exact"},{"name":"SERPINA5-TMPRSS11E complex","type":"exact"},{"name":"plasma serine protease inhibitor-TMPRSS11E complex","type":"exact"},{"name":"protein C inhibitor-transmembrane protease serine 11E complex","type":"exact"},{"name":"serpin A5-TMPRSS11E complex","type":"exact"}],"termid":"GO:0036025"}


id: PBO:0041354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C4B (Chido blood group)","termid":"PBO:0041354"}


id: MONDO:0015757
data:
  {"annotated_genes":["SJAG_02460","SJAG_00980","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88100,88099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[89275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_02460":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoid hemopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20131","UMLS:C5680515","Orphanet:171898","MEDGEN:1842533"],"termid":"MONDO:0015757","terms_by_termid":{"MONDO:0009693":null,"MONDO:0011508":null},"xrefs":{"Monarch":{"xref_id":"0015757"}}}


id: FYPO:0004705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000337","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"delayed onset of mitotic sister chromatid separation","synonyms":[{"name":"delayed mitotic sister chromatid separation","type":"exact"},{"name":"delayed onset of mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"delayed onset of sister chromatid separation during mitosis","type":"exact"},{"name":"delayed onset of sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004705"}


id: GO:0015132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of prostaglandins from one side of a membrane to the other. A prostaglandin is any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transmembrane transporter activity","termid":"GO:0071714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"prostaglandin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5661188","Reactome:R-HSA-9032327","Reactome:R-HSA-879528"],"synonyms":[{"name":"prostaglandin/thromboxane transporter activity","type":"broad"}],"termid":"GO:0015132"}


id: PBO:0053088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1F","termid":"PBO:0053088"}


id: GO:0008587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the imaginal disc-derived wing margin are generated and organized. The wing margin is a strip of cells in the third instar disc at the boundary between the presumptive dorsal and ventral surfaces of the wing blade.","definition_xrefs":["GOC:bf","ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing margin morphogenesis","synonyms":[{"name":"wing margin morphogenesis","type":"exact"}],"termid":"GO:0008587"}


id: MONDO:0971170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer, hereditary, X-linked 3","secondary_identifiers":["OMIM:301120","UMLS:C5935569","MEDGEN:1861605"],"termid":"MONDO:0971170","xrefs":{"Monarch":{"xref_id":"0971170"}}}


id: GO:0070230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"positively_regulates","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte apoptotic process","synonyms":[{"name":"activation of lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of lymphocyte apoptosis","type":"narrow"},{"name":"stimulation of lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of lymphocyte apoptosis","type":"exact"},{"name":"up-regulation of lymphocyte apoptosis","type":"exact"},{"name":"upregulation of lymphocyte apoptosis","type":"exact"}],"termid":"GO:0070230"}


id: MONDO:0019967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kienbock disease is a rare bone disorder of unknown etiology characterized clinically by osteonecrosis of the carpal lunate, eventually leading to collapse of the lunate bone impacting wrist function.","definition_xrefs":["Orphanet:97332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kienbock disease","secondary_identifiers":["NORD:1332","UMLS:C0022682","MEDGEN:44028","GARD:9690","MedDRA:10064242"],"synonyms":[{"name":"Kienbock's disease","type":"related"},{"name":"Kienböck Disease","type":"exact"},{"name":"Lunatomalacia","type":"exact"},{"name":"Osteochondrosis of the lunate bone","type":"exact"},{"name":"aseptic necrosis of the lunate bone","type":"exact"},{"name":"bilateral Kienbock's disease","type":"related"},{"name":"osteochondritis of the lunate bone","type":"exact"}],"termid":"MONDO:0019967","xrefs":{"Monarch":{"xref_id":"0019967"}}}


id: PBO:0087808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein (TBP); general transcription factor that interacts with other factors to form the preinitiation complex at promoters; essential for viability, highly conserved; yeast gene can complement mutations in human homolog TBP","termid":"PBO:0087808"}


id: MONDO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Alzheimer disease 5 (obsolete MONDO:0000906)","synonyms":[{"name":"obsolete Alzheimer's disease 5","type":"exact"}],"termid":"MONDO:0000906","xrefs":{"Monarch":{"xref_id":"0000906"}}}


id: PBO:0082549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central component of GID Complex, involved in FBPase degradation; interacts strongly with Gid8p to serve as a scaffold for other GID Complex subunits; contains SPRY domain and 3 domains that are also found in Gid8p - LisH, CTLH, and CRA; required for association of Vid vesicles and actin patches in vacuole import and degradation pathway; shifts the balance of nitrogen metabolism toward glutamate production; localizes to the nucleus and the cytoplasm","termid":"PBO:0082549"}


id: GO:0003916
data:
  {"annotated_genes":["SJAG_04816","SJAG_05193","SJAG_05295","SJAG_03567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74641,72319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003917"},{"annotations":[70235,73639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003918"}]},"cv_name":"molecular_function","definition":"Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA.","definition_xrefs":["PMID:8811192","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid conformation isomerase activity","termid":"GO:0120545"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03567":null,"SJAG_04816":null,"SJAG_05193":null,"SJAG_05295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DNA topoisomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0009387"],"termid":"GO:0003916","terms_by_termid":{"GO:0003917":null,"GO:0003918":null}}


id: PBO:0058577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6514","termid":"PBO:0058577"}


id: PBO:0077781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TONSL antisense RNA 1","termid":"PBO:0077781"}


id: MONDO:0013741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy that has material basis in heterozygous mutation in the CPA6 gene on chromosome 8q13.","definition_xrefs":["PMID:21922598","DOID:0060752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 5","secondary_identifiers":["OMIM:614417","MEDGEN:482360","UMLS:C3280730","GARD:18280"],"synonyms":[{"name":"ETL5","type":"exact"},{"name":"epilepsy, familial temporal lobe, 5","type":"related"},{"name":"epilepsy, familial temporal lobe, type 5","type":"exact"},{"name":"familial temporal lobe epilepsy type 5","type":"exact"}],"termid":"MONDO:0013741","xrefs":{"Monarch":{"xref_id":"0013741"}}}


id: PBO:0057717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1302-2 host gene","termid":"PBO:0057717"}


id: GO:0072718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cisplatin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cisplatin","termid":"GO:0072718"}


id: PBO:0113085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic aspartyl aminopeptidase with possible vacuole function; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway and via CVT pathway; cleaves unblocked N-terminal acidic amino acids from peptide substrates; forms 12-subunit homo-oligomer; M18 metalloprotease family","termid":"PBO:0113085"}


id: PBO:0047050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM111 trypsin like peptidase A","termid":"PBO:0047050"}


id: PATO:0002057
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An area which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"area","termid":"PATO:0001323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased area","termid":"PATO:0002057"}


id: MONDO:0054577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"bleeding disorder, platelet-type, 21","secondary_identifiers":["MEDGEN:1386863","GARD:16230","UMLS:C4479515","OMIM:617443"],"synonyms":[{"name":"BDPLT21","type":"related"},{"name":"bleeding disorder, platelet-type, 21","type":"exact"}],"termid":"MONDO:0054577","xrefs":{"Monarch":{"xref_id":"0054577"}}}


id: MONDO:0042605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"Y chromosome infertility due to DAZ1 deletion","secondary_identifiers":["HGNC:2682"],"synonyms":[{"name":"DAZ","type":"related"},{"name":"Y chromosome infertility","type":"related"},{"name":"Y chromosome microdeletions","type":"related"},{"name":"deleted in azoospermia","type":"related"},{"name":"male sterility due to Y-chromosome deletions","type":"related"}],"termid":"MONDO:0042605","xrefs":{"Monarch":{"xref_id":"0042605"}}}


id: PBO:0036328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase Mtq2 (predicted)","termid":"PBO:0036328"}


id: PBO:0091576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein adenylyltransferase SelO","termid":"PBO:0091576"}


id: MONDO:0018620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic adipsic hypernatraemia syndrome","secondary_identifiers":["UMLS:C5681196","MEDGEN:1814472","NANDO:2200325","GARD:21850","Orphanet:443101"],"termid":"MONDO:0018620","xrefs":{"Monarch":{"xref_id":"0018620"}}}


id: GO:1905548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","PMID:25819580","GOC:BHF_telomere","GOC:nc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of subtelomeric heterochromatin assembly (obsolete GO:1905548)","synonyms":[{"name":"down regulation of telomeric heterochromatin assembly","type":"related"},{"name":"down regulation of telomeric heterochromatin formation","type":"related"},{"name":"down-regulation of telomeric heterochromatin assembly","type":"related"},{"name":"down-regulation of telomeric heterochromatin formation","type":"related"},{"name":"downregulation of telomeric heterochromatin assembly","type":"related"},{"name":"downregulation of telomeric heterochromatin formation","type":"related"},{"name":"inhibition of telomeric heterochromatin assembly","type":"narrow"},{"name":"inhibition of telomeric heterochromatin formation","type":"narrow"},{"name":"negative regulation of telomeric heterochromatin assembly","type":"related"},{"name":"negative regulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905548"}


id: GO:0033269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath.","definition_xrefs":["GOC:mh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"internode region of axon","secondary_identifiers":["NIF_Subcellular:sao206157942"],"synonyms":[{"name":"internode","type":"exact"}],"termid":"GO:0033269"}


id: MONDO:0010246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Female restricted epilepsy with intellectual disability is a rare X-linked epilepsy syndrome characterized by febrile or afebrile seizures (mainly tonic-clonic, but also absence, myoclonic, and atonic) starting in the first years of life and, in most cases, developmental delay and intellectual disability of variable severity. Behavioral disturbances (e.g. autistic features, hyperactivity, and aggressiveness) are also frequently associated. This disease affects exclusively females, with male carriers being unaffected, despite an X-linked inheritance.","definition_xrefs":["Orphanet:101039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked intellectual disability-epilepsy syndrome","termid":"MONDO:0016160"},{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"X-linked complex neurodevelopmental disorder","termid":"MONDO:0100148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 9","secondary_identifiers":["MEDGEN:338393","NANDO:1200599","OMIM:300088","MESH:C564715","UMLS:C1848137","GARD:10806","DOID:0060848"],"synonyms":[{"name":"DEE9","type":"exact"},{"name":"EFMR","type":"exact"},{"name":"EIEE9","type":"exact"},{"name":"Juberg Hellman syndrome","type":"exact"},{"name":"Juberg-Hellman syndrome","type":"exact"},{"name":"PCDH19 early infantile epileptic encephalopathy","type":"exact"},{"name":"PCDH19-related FLE","type":"related"},{"name":"PCDH19-related female-limited epilepsy","type":"related"},{"name":"PCDH19-related infantile epileptic encephalopathy","type":"related"},{"name":"developmental and epileptic encephalopathy 9","type":"exact"},{"name":"developmental and epileptic encephalopathy, 9","type":"exact"},{"name":"early infantile epileptic encephalopathy 9","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in PCDH19","type":"exact"},{"name":"early infantile epileptic encephalopathy type 9","type":"exact"},{"name":"early infantile female-limited epilecptic encephalopathy","type":"exact"},{"name":"epilepsy and intellectual disability limited to females","type":"related"},{"name":"epilepsy and mental retardation limited to females","type":"related"},{"name":"epilepsy, female restricted, with intellectual disability","type":"related"},{"name":"epilepsy, female restricted, with mental retardation","type":"related"},{"name":"epilepsy, female-restricted, with intellectual disability","type":"related"},{"name":"epilepsy, female-restricted, with mental retardation","type":"related"},{"name":"epileptic encephalopathy, early infantile, 9","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 9","type":"exact"},{"name":"familial epilepsy and intellectual disability limited to females","type":"exact"},{"name":"familial epilepsy and mental retardation limited to females","type":"exact"},{"name":"female restricted epilepsy with intellectual deficit","type":"related"},{"name":"female restricted epilepsy with intellectual disability","type":"exact"},{"name":"female restricted epilepsy with mental retardation","type":"exact"}],"termid":"MONDO:0010246","xrefs":{"Monarch":{"xref_id":"0010246"}}}


id: PBO:0048186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABARAPL1 antisense RNA 1","termid":"PBO:0048186"}


id: PBO:0050490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B cluster","termid":"PBO:0050490"}


id: MONDO:0007393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranioacrofacial syndrome","secondary_identifiers":["UMLS:C1852512","MESH:C565147","MEDGEN:338947","OMIM:122850","Orphanet:1339"],"synonyms":[{"name":"Cranioacrofacial syndrome","type":"exact"}],"termid":"MONDO:0007393","xrefs":{"Monarch":{"xref_id":"0007393"}}}


id: MONDO:0010938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) T-B+ due to JAK3 deficiency is a form of SCID characterized by severe and recurrent infections, associated with diarrhea and failure to thrive.","definition_xrefs":["Orphanet:35078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"},{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency due to JAK3 deficiency","secondary_identifiers":["OMIM:600802","SCTID:718107000","UMLS:C1833275","MEDGEN:331474","MESH:C563440","GARD:16632"],"synonyms":[{"name":"SCID, T cell-negative, B cell-positive, NK cell-negative","type":"related"},{"name":"SCID, autosomal recessive, T-negative/B-positive type","type":"exact"},{"name":"T-B+ SCID due to JAK3 deficiency","type":"exact"},{"name":"T-B+ severe combined immunodeficiency due to JAK3 deficiency","type":"exact"},{"name":"T-cell negative B-cell positive severe combined immunodeficiency due to JAK3 deficiency","type":"exact"},{"name":"severe combined immunodeficiency T-cell negative B-cell positive due to janus kinase-3 deficiency","type":"related"},{"name":"severe combined immunodeficiency, autosomal recessive, T cell-NEGATIVE, B cell-POSITIVE, NK cell-NEGATIVE","type":"related"}],"termid":"MONDO:0010938","xrefs":{"Monarch":{"xref_id":"0010938"}}}


id: PBO:0088365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin, nucleolar histone chaperone required for rRNA metabolism","termid":"PBO:0088365"}


id: PBO:0056481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 3","termid":"PBO:0056481"}


id: PBO:0080965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 7B","termid":"PBO:0080965"}


id: PBO:0058040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4261","termid":"PBO:0058040"}


id: GO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near host (obsolete GO:0052125)","termid":"GO:0052125"}


id: MONDO:0022599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly anonychia","termid":"MONDO:0022599","xrefs":{"Monarch":{"xref_id":"0022599"}}}


id: MONDO:0010651
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87367],"is_not":false,"summary":null,"term":"MONDO:0010651"}]},"cv_name":"mondo","definition":"A usually severe multisystemic disorder of copper metabolism, characterized by progressive neurodegeneration and marked connective tissue anomalies as well as typical sparse abnormal steely hair.","definition_xrefs":["Orphanet:565"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic hair shaft abnormality (obsolete MONDO:0019282)","termid":"MONDO:0019282"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes structural anomaly (obsolete MONDO:0020189)","termid":"MONDO:0020189"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"disorder of copper metabolism","termid":"MONDO:0017762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Menkes disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200580","OMIM:309400","SCTID:59178007","NANDO:1200653","ICD9:759.89","UMLS:C0022716","GARD:1521","MEDGEN:44030","DOID:1838","icd11.foundation:986728180","NCIT:C75486","NORD:1440","MESH:D007706","MedDRA:10027294"],"synonyms":[{"name":"MD","type":"exact"},{"name":"MNK","type":"exact"},{"name":"Menkea syndrome","type":"related"},{"name":"Menkes disease","type":"exact"},{"name":"Menkes kinky hair syndrome","type":"exact"},{"name":"Menkes kinky-hair syndrome","type":"exact"},{"name":"Menkes syndrome","type":"exact"},{"name":"Mk","type":"exact"},{"name":"Trichopoliodystrophy","type":"exact"},{"name":"X-linked copper deficiency","type":"exact"},{"name":"copper transport disease","type":"broad"},{"name":"kinky hair disease","type":"exact"},{"name":"kinky hair syndrome","type":"exact"},{"name":"menkes disease, X-linked recessive","type":"exact"},{"name":"steely hair disease","type":"exact"},{"name":"steely hair syndrome","type":"exact"}],"termid":"MONDO:0010651","terms_by_termid":{"MONDO:0010651":null},"xrefs":{"Monarch":{"xref_id":"0010651"}}}


id: GO:1900492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:pr","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [4Fe-4S] cluster assembly","termid":"GO:1900491"},{"relation_name":"is_a","term_name":"negative regulation of iron-sulfur cluster assembly","termid":"GO:1903330"},{"relation_name":"negatively_regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016226"],"is_obsolete":false,"name":"negative regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"down regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"down-regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"downregulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"inhibition of 4Fe-4S cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"negative regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"negative regulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900492"}


id: PBO:0011415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activated_by","termid":"PBO:0011415"}


id: PBO:0045881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 5","termid":"PBO:0045881"}


id: GO:0051996
data:
  {"annotated_genes":["SJAG_02719"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78384],"is_not":false,"summary":null,"term":"GO:0051996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 (2E,6E)-farnesyl diphosphate + H+ + NAD(P)H = 2 diphosphate + NAD(P)+ + squalene.","definition_xrefs":["EC:2.5.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02719":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"squalene synthase [NAD(P)H] activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-191402","MetaCyc:RXN66-281","Reactome:R-HSA-191405"],"synonyms":[{"name":"farnesyl-diphosphate farnesyltransferase activity","type":"narrow"},{"name":"farnesyltransferase activity","type":"broad"},{"name":"presqualene synthase activity","type":"exact"},{"name":"presqualene-diphosphate synthase activity","type":"exact"},{"name":"squalene synthase activity","type":"exact"},{"name":"squalene synthetase activity","type":"related"}],"termid":"GO:0051996","terms_by_termid":{"GO:0051996":null}}


id: PBO:0075137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide A'","termid":"PBO:0075137"}


id: PBO:0074534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA G2","termid":"PBO:0074534"}


id: GO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus during erythrocyte maturation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enucleation","termid":"GO:0090601"},{"relation_name":"part_of","term_name":"enucleate erythrocyte maturation","termid":"GO:0043354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte enucleation","termid":"GO:0043131"}


id: PBO:0064019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 53","termid":"PBO:0064019"}


id: MOD:00230
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, two L-histidine residues and a two-iron two-sulfur cluster to bis-L-cysteinyl bis-L-histidino diiron disulfide.","definition_xrefs":["PubMed:2765515","PubMed:9651245","RESID:AA0225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"bis-L-cysteinyl bis-L-histidino diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"METAL Iron-sulfur (2Fe-2S); via pros nitrogen","type":"exact"},{"name":"Rieske iron-sulfur cofactor","type":"exact"},{"name":"bis-L-cysteinyl bis-L-histidino diiron disulfide","type":"exact"},{"name":"di-mu-sulfido(bis-S-cysteinyliron)(bis-N3'-histidinoiron)","type":"exact"}],"termid":"MOD:00230"}


id: PBO:0051447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 4-3","termid":"PBO:0051447"}


id: PBO:0040509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin induced 1","termid":"PBO:0040509"}


id: PBO:0064268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G2","termid":"PBO:0064268"}


id: GO:0047828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lyxose = D-xylulose.","definition_xrefs":["EC:5.3.1.15","RHEA:14201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"D-lyxose ketol-isomerase activity","secondary_identifiers":["KEGG_REACTION:R01898","MetaCyc:D-LYXOSE-KETOL-ISOMERASE-RXN"],"synonyms":[{"name":"D-lyxose aldose-ketose-isomerase activity","type":"related"},{"name":"D-lyxose isomerase activity","type":"related"}],"termid":"GO:0047828"}


id: PBO:0049406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 2B","termid":"PBO:0049406"}


id: PBO:0054836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2250","termid":"PBO:0054836"}


id: GO:0061437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of vasculature of the renal system over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10","PMID:11891195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature development","termid":"GO:0061437"}


id: GO:0034682
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alphav-beta1 complex","synonyms":[{"name":"ITGAV-ITGB1 complex","type":"narrow"},{"name":"alphav-beta1 integrin complex","type":"exact"}],"termid":"GO:0034682"}


id: GO:1901911
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81142],"is_not":false,"summary":null,"term":"GO:1901911"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adenosine 5'-(hexahydrogen pentaphosphate).","definition_xrefs":["PMID:10090752","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"adenosine 5'-(hexahydrogen pentaphosphate) metabolic process","termid":"GO:1901910"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"adenosine 5'-(hexahydrogen pentaphosphate) catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"adenosine 5'-(hexahydrogen pentaphosphate) breakdown","type":"exact"},{"name":"adenosine 5'-(hexahydrogen pentaphosphate) catabolism","type":"exact"},{"name":"adenosine 5'-(hexahydrogen pentaphosphate) degradation","type":"exact"}],"termid":"GO:1901911","terms_by_termid":{"GO:1901911":null}}


id: MONDO:0958330
data:
  {"annotated_genes":["SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89098],"is_not":false,"summary":null,"term":"MONDO:0958330"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02060":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 113","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1859161","OMIM:620772","UMLS:C5935597"],"termid":"MONDO:0958330","terms_by_termid":{"MONDO:0958330":null},"xrefs":{"Monarch":{"xref_id":"0958330"}}}


id: PBO:0076661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 23, pseudogene","termid":"PBO:0076661"}


id: PBO:0049444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, very large interferon inducible pseudogene 2","termid":"PBO:0049444"}


id: GO:0071642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of macrophage inflammatory protein 1 alpha production","termid":"GO:0071640"},{"relation_name":"positively_regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"positive regulation of CCL3 production","type":"exact"},{"name":"positive regulation of MIP-1a production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"positive regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071642"}


