# terms

id: PomGeneEx:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRD","definition":"A qualifier that describes the fraction of ribosomes that are translating each codon of an mRNA, and reflects the average time spent by the ribosome on each codon.","definition_xrefs":["PMID:29432178","PomBase:mah","PMID:33313903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal density","synonyms":[{"name":"ribosome density","type":"exact"},{"name":"ribosome occupancy","type":"exact"}],"termid":"PomGeneEx:0000025"}


id: FYPO:0002199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal morphology (i.e. size, shape, and structure) but is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"},{"relation_name":"is_a","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"inviable vegetative cell with normal cell morphology","synonyms":[{"name":"inviable cell with normal cell morphology during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with normal cell morphology during mitotic cell cycle","type":"related"},{"name":"inviable vegetative cell with normal cell shape and size","type":"exact"},{"name":"lethal; vegetative cell with normal cell morphology","type":"exact"}],"termid":"FYPO:0002199"}


id: PBO:0071819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 14","termid":"PBO:0071819"}


id: GO:0046311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prenylcysteine, 3-methyl-2-buten-1-yl-cysteine, a derivative of the amino acid cysteine formed by the covalent addition of a prenyl residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylcysteine biosynthetic process","synonyms":[{"name":"prenylcysteine anabolism","type":"exact"},{"name":"prenylcysteine biosynthesis","type":"exact"},{"name":"prenylcysteine formation","type":"exact"},{"name":"prenylcysteine synthesis","type":"exact"}],"termid":"GO:0046311"}


id: SO:1001277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recoding stimulatory signal located downstream of the recoding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_recoding_site","synonyms":[{"name":"three prime recoding site","type":"exact"}],"termid":"SO:1001277"}


id: PBO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein 2","termid":"PBO:0004917"}


id: PBO:0011102
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seckel syndrome","termid":"PBO:0011102"}


id: GO:0099593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of an endocytosed synaptic vesicle with an endosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle to endosome fusion","termid":"GO:0016189"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"endocytosed synaptic vesicle to endosome fusion","termid":"GO:0099593"}


id: PBO:0085920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau1p","termid":"PBO:0085920"}


id: MONDO:1010535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megacolon that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megacolon, non-human animal","termid":"MONDO:1010039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megacolon, domestic cat","secondary_identifiers":["OMIA:000629-9685"],"termid":"MONDO:1010535","xrefs":{"Monarch":{"xref_id":"1010535"}}}


id: PBO:0060203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin like 1","termid":"PBO:0060203"}


id: PBO:0052517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL30 antisense RNA 1","termid":"PBO:0052517"}


id: PBO:0051316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-118 (pseudogene)","termid":"PBO:0051316"}


id: MONDO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Pyle disease","termid":"MONDO:0009943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metaphyseal chondrodysplasia","secondary_identifiers":["HP:0005871","SCTID:28681006","MEDGEN:120528","UMLS:C0265290"],"synonyms":[{"name":"metaphyseal chondrodysplasia","type":"exact"},{"name":"metaphyseal chondrodysplasia (disease)","type":"exact"}],"termid":"MONDO:0000138","xrefs":{"Monarch":{"xref_id":"0000138"}}}


id: MONDO:0008781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A juvenile amyotrophic lateral sclerosis that is slowly progressive with concomitantly progressive dementia.","definition_xrefs":["PMID:5692341","DOID:0110067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile amyotrophic lateral sclerosis","termid":"MONDO:0017593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"juvenile amyotrophic lateral sclerosis with dementia","secondary_identifiers":["OMIM:205200","MESH:C565956","MEDGEN:395347","UMLS:C1859806"],"synonyms":[{"name":"ALS-dementia Complex","type":"related"},{"name":"ALS-dementia complex","type":"exact"},{"name":"amyotrophic lateral sclerosis, juvenile, with dementia","type":"related"}],"termid":"MONDO:0008781","xrefs":{"Monarch":{"xref_id":"0008781"}}}


id: GO:0019123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-methionine.","definition_xrefs":["RESID:AA0193"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-methionine racemization (obsolete GO:0019123)","termid":"GO:0019123"}


id: MONDO:0009746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary sensory and autonomic neuropathy, type 4 (HSAN4) is an inherited disorder characterized by anhidrosis, insensitivity to pain, self-mutilating behavior and episodes of fever.","definition_xrefs":["Orphanet:642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 4","secondary_identifiers":["PMID:14272277","NANDO:1200553","NORD:1236","PMID:8696348","UMLS:C0020074","MEDGEN:6915","icd11.foundation:1831234152","SCTID:62985007","NCIT:C118633","GARD:3006","DOID:0070146","OMIM:256800","NANDO:2200854"],"synonyms":[{"name":"CIP-anhidrosis syndrome","type":"exact"},{"name":"CIPA","type":"related"},{"name":"HSAN 4","type":"related"},{"name":"HSAN IV","type":"related"},{"name":"HSAN4","type":"exact"},{"name":"HSNAN4","type":"related"},{"name":"Hereditary Sensory and Autonomic Neuropathy Type IV","type":"exact"},{"name":"NTRK1 hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"congenital insensitivity to pain with anhidrosis","type":"exact"},{"name":"congenital insensitivity to pain-anhidrosis syndrome","type":"exact"},{"name":"familial dysautonomia, type 2","type":"related"},{"name":"hereditary sensory and autonomic neuropathy 4","type":"related"},{"name":"hereditary sensory and autonomic neuropathy caused by mutation in NTRK1","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type IV","type":"exact"},{"name":"hereditary sensory neuropathy type 4","type":"related"},{"name":"hereditary sensory neuropathy type IV","type":"exact"},{"name":"insensitivity to pain, congenital, with anhidrosis","type":"exact"},{"name":"neuropathy, congenital sensory, with anhidrosis","type":"related"}],"termid":"MONDO:0009746","xrefs":{"Monarch":{"xref_id":"0009746"}}}


id: GO:0086036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in a cardiac muscle cell (a cardiomyocyte). A membrane potential is the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell membrane potential","termid":"GO:0086036"}


id: FYPO:0005235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is abolished.","definition_xrefs":["PMID:21945095","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to chromatin at stalled replication fork","synonyms":[{"name":"abolished protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at stalled replication fork during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005235"}


id: GO:1901673
data:
  {"annotated_genes":["SJAG_04464","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73334],"is_not":false,"summary":null,"term":"GO:1901673"},{"annotations":[113429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"is_a","term_name":"regulation of spindle assembly","termid":"GO:0090169"},{"relation_name":"regulates","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0044085","GO:0000226","GO:0007049","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle assembly involved in mitosis","type":"exact"}],"termid":"GO:1901673","terms_by_termid":{"GO:0110161":null,"GO:1901673":null}}


id: GO:0035445
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"}]},"cv_name":"biological_process","definition":"The process in which borate is transported across a membrane. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"borate transport","termid":"GO:0046713"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"borate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"borate membrane transport","type":"exact"},{"name":"boron transmembrane transport","type":"related"}],"termid":"GO:0035445","terms_by_termid":{"GO:0140159":null}}


id: GO:0008687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxyphenylacetate + O2 = 5-formyl-2-hydroxyhepta-2,4-dienedioate + H+.","definition_xrefs":["RHEA:15633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3,4-dihydroxyphenylacetate 2,3-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03303","UM-BBD_reactionID:r0364","EC:1.13.11.15","MetaCyc:1.13.11.15-RXN"],"synonyms":[{"name":"3,4-dihydroxyphenylacetate:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"3,4-dihydroxyphenylacetic acid 2,3-dioxygenase activity","type":"related"},{"name":"HPC dioxygenase activity","type":"related"},{"name":"homoprotocatechuate 2,3-dioxygenase activity","type":"related"}],"termid":"GO:0008687"}


id: PR:Q9P3U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity hexose transporter ght8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.06c","synonyms":[{"name":"Spom972h-ght8","type":"exact"},{"name":"hexose transporter 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U7"}


id: PBO:0076815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM2 antisense RNA 2","termid":"PBO:0076815"}


id: FYPO:0004372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the mitotic G2 DNA damage checkpoint is decreased. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0072435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000298","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased response to mitotic G2 DNA damage checkpoint signaling","synonyms":[{"name":"decreased G2 DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"reduced response to mitotic G2 DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0004372"}


id: PBO:0087140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that directly activates mRNA decapping; binds mRNA substrate and enhances activity of decapping proteins Dcp1p and Dcp2p; has a role in translation during heat stress; protein increases in abundance and relocalizes to nucleolus and to nuclear foci upon DNA replication stress; EDC2 has a paralog, EDC1, that arose from the whole genome duplication","termid":"PBO:0087140"}


id: MONDO:0015374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary central nervous system vasculitis","secondary_identifiers":["UMLS:C2930862","GARD:8703","MEDGEN:419271","Orphanet:140989","MESH:D020293","MESH:C537295"],"synonyms":[{"name":"PACNS","type":"exact"},{"name":"PCNSV","type":"exact"},{"name":"granulomatous angiitis of the central nervous system","type":"related"},{"name":"isolated angiitis of the central nervous system","type":"exact"},{"name":"primary CNS vasculitis","type":"related"},{"name":"primary angiitis of the central nervous system","type":"exact"},{"name":"primary central nervous system vasculitis","type":"exact"},{"name":"primary vasculitis of the central nervous system","type":"exact"}],"termid":"MONDO:0015374","xrefs":{"Monarch":{"xref_id":"0015374"}}}


id: GO:0032870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hormone stimulus","termid":"GO:0032870"}


id: PBO:0066823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 122","termid":"PBO:0066823"}


id: PBO:0088025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2B component of U2 snRNP; involved in splicing, binds the U2 snRNA stem-loop IV in vitro but requires association of Lea1p for in vivo binding; does not contain the conserved C-terminal RNA binding domain found in other family members","termid":"PBO:0088025"}


id: GO:0003179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of a heart valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve morphogenesis","synonyms":[{"name":"heart valve remodeling","type":"narrow"},{"name":"heart valve remodelling","type":"narrow"}],"termid":"GO:0003179"}


id: PBO:0075176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 6","termid":"PBO:0075176"}


id: PBO:0072404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 9","termid":"PBO:0072404"}


id: PBO:0056911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MER1 repeat containing imprinted transcript 1","termid":"PBO:0056911"}


id: GO:1904841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TORC2 complex.","definition_xrefs":["PMID:20660630","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TORC2 complex binding","synonyms":[{"name":"TOR complex 2 binding","type":"exact"},{"name":"TORC 2 complex binding","type":"exact"},{"name":"TORC2 binding","type":"exact"},{"name":"mTORC2 binding","type":"narrow"},{"name":"rapamycin and nutrient-insensitive TOR complex binding","type":"exact"}],"termid":"GO:1904841"}


id: GO:0140109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 monomethylated at lysine 4.","definition_xrefs":["PMID:18840606","PMID:29255264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0140566","GO:0030674"],"is_obsolete":false,"name":"histone H3K4me1 reader activity","synonyms":[{"name":"H3-K4me1 modified histone binding","type":"narrow"},{"name":"H3K4me1 modified histone binding","type":"narrow"}],"termid":"GO:0140109"}


id: GO:0047358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycoprotein D-mannose + UDP-D-glucose = glycoprotein 6-(D-glucose-1-phospho)-D-mannose + UMP.","definition_xrefs":["MetaCyc:2.7.8.19-RXN","EC:2.7.8.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016780"],"is_obsolete":false,"name":"UDP-glucose-glycoprotein glucose phosphotransferase activity","secondary_identifiers":["RHEA:20181"],"synonyms":[{"name":"Glc-phosphotransferase activity","type":"related"},{"name":"GlcPTase activity","type":"related"},{"name":"UDP-glucose:glycoprotein glucose-1-phosphotransferase activity","type":"related"},{"name":"UDP-glucose:glycoprotein-D-mannose glucosephosphotransferase activity","type":"related"},{"name":"UDPglucose-glycoprotein glucose phosphotransferase activity","type":"related"},{"name":"UDPglucose:glycoprotein-D-mannose glucosephosphotransferase activity","type":"related"},{"name":"uridine diphosphoglucose-glycoprotein glucose-1-phosphotransferase activity","type":"related"}],"termid":"GO:0047358"}


id: FYPO:0005955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the entire mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle","synonyms":[{"name":"increased duration of mitotic cell cycle during vegetative growth","type":"exact"},{"name":"prolonged mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005955"}


id: PR:000030005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe ypt5 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt5 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC6F6.15","synonyms":[{"name":"SPAC6F6.15","type":"related"},{"name":"Spom-ypt5","type":"exact"}],"termid":"PR:000030005"}


id: PBO:0081029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11A","termid":"PBO:0081029"}


id: MONDO:0001493
data:
  {"annotated_genes":["SJAG_04757","SJAG_03866"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88560,88559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","definition":"Heart disease which occurs as a result of a primary pulmonary disease. Cor pulmonale most often manifests as right ventricular hypertrophy; it can also lead to right ventricular failure.","definition_xrefs":["NCIT:C34478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cor pulmonale","termid":"MONDO:0004596"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"chronic pulmonary heart disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:416.9","UMLS:C0238074","MEDGEN:116042","SCTID:87837008","ICD9:416.8","DOID:12326","NANDO:2200299"],"synonyms":[{"name":"Cor pulmonale","type":"broad"}],"termid":"MONDO:0001493","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0001493"}}}


id: PR:Q9P7I6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7I6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C24B10.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.20","synonyms":[{"name":"Spom972h-SPCC24B10.20","type":"exact"}],"termid":"PR:Q9P7I6"}


id: PBO:0034495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_iron_assimilation_gene_mRNA_during_vegetative_growth","termid":"PBO:0034495"}


id: GO:1904634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glomerular visceral epithelial cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23692924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of podocyte apoptotic process","termid":"GO:1904633"},{"relation_name":"negatively_regulates","term_name":"podocyte apoptotic process","termid":"GO:1903210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of podocyte apoptotic process","synonyms":[{"name":"down regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"down regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"down regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"down regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"down regulation of podocyte apoptosis","type":"narrow"},{"name":"down regulation of podocyte apoptotic process","type":"exact"},{"name":"down-regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"down-regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"down-regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"down-regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"down-regulation of podocyte apoptosis","type":"narrow"},{"name":"down-regulation of podocyte apoptotic process","type":"exact"},{"name":"downregulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"downregulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"downregulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"downregulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"downregulation of podocyte apoptosis","type":"narrow"},{"name":"downregulation of podocyte apoptotic process","type":"exact"},{"name":"inhibition of glomerular podocyte apoptosis","type":"narrow"},{"name":"inhibition of glomerular podocyte apoptotic process","type":"narrow"},{"name":"inhibition of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"inhibition of glomerular visceral epithelial cell apoptotic process","type":"narrow"},{"name":"inhibition of podocyte apoptosis","type":"narrow"},{"name":"inhibition of podocyte apoptotic process","type":"narrow"},{"name":"negative regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"negative regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"negative regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"negative regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"negative regulation of podocyte apoptosis","type":"exact"}],"termid":"GO:1904634"}


id: SO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The promoter of a cryptic gene.","definition_xrefs":["GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"},{"relation_name":"part_of","term_name":"cryptic_gene","termid":"SO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_promoter","synonyms":[{"name":"cryptic promoter","type":"exact"}],"termid":"SO:0002310"}


id: GO:0023041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an activated neuronal cell receptor conveys information down a signaling pathway, resulting in a change in the function or state of a cell. This process may be intracellular or intercellular.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuronal signal transduction","termid":"GO:0023041"}


id: MONDO:0010215
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88562],"is_not":false,"summary":null,"term":"MONDO:0010215"}]},"cv_name":"mondo","definition":"Any xeroderma pigmentosum in which the cause of the disease is a mutation in the ERCC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum-Cockayne syndrome complex","termid":"MONDO:0016354"},{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum group F","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5628","MESH:C562592","NCIT:C3968","MEDGEN:120612","OMIM:278760","SCTID:42530008","DOID:0110848","Orphanet:276264","UMLS:C0268140"],"synonyms":[{"name":"ERCC4 xeroderma pigmentosum","type":"exact"},{"name":"XP group F","type":"exact"},{"name":"XP, group F","type":"exact"},{"name":"XP-F","type":"exact"},{"name":"XP6","type":"exact"},{"name":"XPF","type":"exact"},{"name":"xeroderma pigmentosum 6","type":"related"},{"name":"xeroderma pigmentosum VI","type":"exact"},{"name":"xeroderma pigmentosum caused by mutation in ERCC4","type":"exact"},{"name":"xeroderma pigmentosum group F","type":"exact"},{"name":"xeroderma pigmentosum group type F","type":"exact"},{"name":"xeroderma pigmentosum, complementation group F","type":"related"},{"name":"xeroderma pigmentosum, complementation group type F","type":"exact"},{"name":"xeroderma pigmentosum, group F","type":"exact"},{"name":"xeroderma pigmentosum, type 6","type":"related"},{"name":"xeroderma pigmentosum, type F/Cockayne syndrome","type":"related"}],"termid":"MONDO:0010215","terms_by_termid":{"MONDO:0010215":null},"xrefs":{"Monarch":{"xref_id":"0010215"}}}


id: PBO:0071493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 34","termid":"PBO:0071493"}


id: MONDO:1011860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic syndrome, non-human animal","secondary_identifiers":["OMIA:000929"],"termid":"MONDO:1011860","xrefs":{"Monarch":{"xref_id":"1011860"}}}


id: PBO:0057677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1268a","termid":"PBO:0057677"}


id: PBO:0025450
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNB2L1","termid":"PBO:0025450"}


id: SO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Messenger RNA sequences that are untranslated and lie five prime or three prime to sequences which are translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR","synonyms":[{"name":"untranslated region","type":"exact"}],"termid":"SO:0000203"}


id: PBO:0040907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 11","termid":"PBO:0040907"}


id: PBO:0051948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase B","termid":"PBO:0051948"}


id: GO:0009012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = 3''-adenylylstreptomycin + diphosphate + H+.","definition_xrefs":["RHEA:20245","EC:2.7.7.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside nucleotidyltransferase activity","termid":"GO:0034068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside 3''-adenylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02226","MetaCyc:STREPTOMYCIN-3-ADENYLYLTRANSFERASE-RXN"],"synonyms":[{"name":"AAD (3'')","type":"related"},{"name":"ATP:streptomycin 3''-adenylyltransferase activity","type":"narrow"},{"name":"streptomycin 3''-adenylyltransferase activity","type":"narrow"}],"termid":"GO:0009012"}


id: MONDO:0010727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Silver-Russell syndrome","termid":"MONDO:0008394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Russell-silver syndrome, X-linked","secondary_identifiers":["OMIM:312780","UMLS:C0220775","ICD9:758.81","MEDGEN:67401","SCTID:702412005"],"synonyms":[{"name":"Partington syndrome","type":"related"},{"name":"Russell-Silver-like syndrome with skin pigmentation","type":"related"},{"name":"Russell-silver syndrome, X-linked","type":"exact"}],"termid":"MONDO:0010727","xrefs":{"Monarch":{"xref_id":"0010727"}}}


id: PBO:0109017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 19, pseudogene","termid":"PBO:0109017"}


id: GO:0015225
data:
  {"annotated_genes":["SJAG_02780","SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73676,81100],"is_not":false,"summary":null,"term":"GO:0015225"}]},"cv_name":"molecular_function","definition":"Enables the transfer of biotin from one side of a membrane to the other. Biotin is cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid; the (+) enantiomer is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02779":null,"SJAG_02780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"biotin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:TRANS-RXN0-240","GO:1901603"],"synonyms":[{"name":"biotin transporter activity","type":"related"},{"name":"vitamin B7 transporter activity","type":"related"},{"name":"vitamin H transporter activity","type":"related"}],"termid":"GO:0015225","terms_by_termid":{"GO:0015225":null}}


id: GO:0141223
data:
  {"annotated_genes":["SJAG_00582"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111445],"is_not":false,"summary":null,"term":"GO:0141223"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + O-succinyl-L-serine = L-cysteine + succinate.","definition_xrefs":["RHEA:53816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00582":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"cysteine synthase activity, acting on O-succinyl-L-serine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cysteine synthase activity","type":"broad"}],"termid":"GO:0141223","terms_by_termid":{"GO:0141223":null}}


id: GO:2000775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H3-S10 phosphorylation that is involved in chromosome condensation.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S10 phosphorylation involved in chromosome condensation (obsolete GO:2000775)","synonyms":[{"name":"histone H3 phosphorylation at S10 of chromosome condensation","type":"exact"},{"name":"histone H3-S10 phosphorylation of chromosome condensation","type":"exact"}],"termid":"GO:2000775"}


id: MONDO:0005689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Physical and psychological dependence on the drug cannabis.","definition_xrefs":["NCIT:C34445"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"substance abuse","termid":"MONDO:0002491"},{"relation_name":"excluded_subClassOf","term_name":"hallucinogen dependence","termid":"MONDO:0004939"},{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cannabis dependence","secondary_identifiers":["DOID:1849","ICD9:304.3","ICD9:304.30","SCTID:37344009","DOID:9505","MESH:D002189","SCTID:85005007","icd11.foundation:1129015467","ICD9:305.2","MEDGEN:14303","ICD10CM:F12.2","UMLS:C0006870","EFO:0007191"],"synonyms":[{"name":"cannabis abuse","type":"exact"},{"name":"marijuana abuse","type":"exact"},{"name":"marijuana dependence","type":"exact"}],"termid":"MONDO:0005689","xrefs":{"Monarch":{"xref_id":"0005689"}}}


id: MONDO:0021400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"},{"relation_name":"is_a","term_name":"polyp of large intestine","termid":"MONDO:0021392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"polyp of colon","secondary_identifiers":["ICD10CM:K63.5","icd11.foundation:1408488915","MEDGEN:3166","NCIT:C2954","SCTID:68496003","UMLS:C0009376","MESH:D003111"],"synonyms":[{"name":"colon polyp","type":"exact"},{"name":"colonic polyp","type":"exact"},{"name":"polyp of the colon","type":"exact"}],"termid":"MONDO:0021400","xrefs":{"Monarch":{"xref_id":"0021400"}}}


id: GO:0015918
data:
  {"annotated_genes":["SJAG_03718","SJAG_00261","SJAG_02375","SJAG_01590","SJAG_02323","SJAG_01329","SJAG_01722","SJAG_00355","SJAG_03247","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113322,96192,118218,110181,104565,93430,108296,111348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[73833,63187,78883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03247":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sterol transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015918","terms_by_termid":{"GO:0032366":null,"GO:0120011":null}}


id: _global:is_bearer_of
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_bearer_of","secondary_identifiers":["BFO:0000053"],"synonyms":[{"name":"has_color","type":"narrow"}],"termid":"_global:is_bearer_of"}


id: PBO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family (predicted)","termid":"PBO:0002011"}


id: PBO:0027260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-S10_phosphorylation","termid":"PBO:0027260"}


id: MONDO:0010306
data:
  {"annotated_genes":["SJAG_01540"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88063],"is_not":false,"summary":null,"term":"MONDO:0010306"}]},"cv_name":"mondo","definition":"X-linked intellectual disability, Cabezas type is characterized by intellectual deficit, muscle wasting, short stature, a prominent lower lip, small testes, kyphosis and joint hyperextensibility. An abnormal gait, tremor, decreased fine motor coordination and impaired speech are also present. The syndrome has been described in six boys from three generations of the same family. Transmission is X-linked and the causative gene has been localized to the q24-q25 region of the X chromosome.","definition_xrefs":["Orphanet:85293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability, Cabezas type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060822","OMIM:300354","SCTID:719811001","UMLS:C1845861","MEDGEN:337334","GARD:13244"],"synonyms":[{"name":"Cabezas syndrome","type":"exact"},{"name":"Cabezas syndrome; syndromic X-linked intellectual disability 15","type":"exact"},{"name":"Cabezas syndrome; syndromic X-linked mental retardation 15","type":"exact"},{"name":"Cabezas type of X-linked syndromic intellectual disability","type":"related"},{"name":"Cul4B-related X-linked intellectual disability","type":"related"},{"name":"MRSS","type":"exact"},{"name":"MRXS15","type":"exact"},{"name":"MRXSC","type":"exact"},{"name":"X-linked intellectual disability with short stature","type":"exact"},{"name":"X-linked intellectual disability with short stature, hypogonadism, and abnormal gait","type":"exact"},{"name":"X-linked intellectual disability, Cabezas type","type":"exact"},{"name":"X-linked mental retardation with short stature","type":"exact"},{"name":"X-linked mental retardation with short stature, hypogonadism, and abnormal gait","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 15","type":"related"},{"name":"intellectual disability, X-linked, syndromic 15 (Cabezas type)","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Cabezas type","type":"related"},{"name":"intellectual disability, X-linked, with short stature","type":"exact"},{"name":"intellectual disability, X-linked, with short stature, hypogonadism, and abnormal Gait","type":"related"},{"name":"mental retardation, X-linked, syndromic 15","type":"related"},{"name":"mental retardation, X-linked, syndromic 15 (Cabezas type)","type":"exact"},{"name":"mental retardation, X-linked, syndromic 15 (Cabezas type), X-linked recessive","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Cabezas type","type":"related"},{"name":"mental retardation, X-linked, with short stature","type":"exact"},{"name":"mental retardation, X-linked, with short stature, hypogonadism, and abnormal Gait","type":"related"},{"name":"syndromic X-linked intellectual disability Cabezas type","type":"exact"}],"termid":"MONDO:0010306","terms_by_termid":{"MONDO:0010306":null},"xrefs":{"Monarch":{"xref_id":"0010306"}}}


id: GO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An nuclear membrane protein complex having arachidonate 5-lipoxygenase activity.","definition_xrefs":["PMID:19075240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"nuclear membrane","termid":"GO:0031965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"5-lipoxygenase complex","termid":"GO:0002180"}


id: MONDO:0005302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mental disorder characterized by inattention, easy distraction, careless mistakes and avoidance of tasks that require sustained mental focus. These behaviors can lead to maladaptive consequences in the affected individual's life.","definition_xrefs":["NCIT:C35092"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"oppositional defiant disorder","termid":"MONDO:0000495"},{"relation_name":"excluded_subClassOf","term_name":"specific developmental disorder","termid":"MONDO:0000592"},{"relation_name":"is_a","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit hyperactivity disorder, inattentive type","secondary_identifiers":["MESH:D001289","ICD9:314.8","UMLS:C0339002","ICD9:314.01","MEDGEN:473060","SCTID:406506008","DOID:1094","ICD9:314.9"],"synonyms":[{"name":"ADD","type":"exact"},{"name":"ADHD","type":"exact"},{"name":"attention deficit disorder","type":"exact"},{"name":"attention deficit hyperactivity disorder, inattentive/distractible type","type":"exact"},{"name":"attention deficit hyperactivity disorder, predominantly inattentive type","type":"exact"},{"name":"hyperkinetic disorder","type":"exact"}],"termid":"MONDO:0005302","xrefs":{"Monarch":{"xref_id":"0005302"}}}


id: PBO:0085776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein necessary for stability of L-A dsRNA-containing particles","termid":"PBO:0085776"}


id: PBO:0092021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit 6","termid":"PBO:0092021"}


id: MONDO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common type of colorectal carcinoma. It is characterized by the presence of malignant glandular epithelial cells invading through the muscularis mucosa into the submucosa. Histologic variants include mucinous adenocarcinoma, signet ring cell carcinoma, medullary carcinoma, serrated adenocarcinoma, cribriform comedo-type adenocarcinoma, and micropapillary adenocarcinoma.","definition_xrefs":["NCIT:C5105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"colorectal carcinoma","termid":"MONDO:0024331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colorectal adenocarcinoma","secondary_identifiers":["DOID:0050913","DOID:0050861","EFO:0000365","SCTID:269533000","UMLS:C1319315","ONCOTREE:COADREAD","MEDGEN:230816","SCTID:408645001"],"synonyms":[{"name":"adenocarcinoma of large bowel","type":"exact"},{"name":"adenocarcinoma of large intestine","type":"exact"},{"name":"adenocarcinoma of the large bowel","type":"exact"},{"name":"adenocarcinoma of the large intestine","type":"exact"},{"name":"colorectal (colon or rectal) adenocarcinoma","type":"exact"},{"name":"colorectal adenocarcinoma","type":"exact"},{"name":"colorectum adenocarcinoma","type":"exact"},{"name":"large bowel adenocarcinoma","type":"exact"},{"name":"large intestine adenocarcinoma","type":"exact"}],"termid":"MONDO:0005008","xrefs":{"Monarch":{"xref_id":"0005008"}}}


id: PBO:0029003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3_binding","termid":"PBO:0029003"}


id: PBO:0029247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0029247"}


id: PBO:0041282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1QTNF7 antisense RNA 1","termid":"PBO:0041282"}


id: PBO:0045564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 12 pseudogene 1","termid":"PBO:0045564"}


id: GO:1901853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["UniPathway:UPA00069","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin metabolic process","termid":"GO:2001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin metabolism","type":"exact"}],"termid":"GO:1901853"}


id: PBO:0032744
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominently single copy (one to one)","termid":"PBO:0032744"}


id: PBO:0062726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily A member 5","termid":"PBO:0062726"}


id: PBO:0005103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C PHD Finger protein Spf1","termid":"PBO:0005103"}


id: MONDO:0011022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Potocki-Shaffer syndrome is characterized by multiple exostoses, parietal foramina, enlargement of the anterior fontanelle and occasionally intellectual deficit and mild cranio-facial anomalies. To date, 23 individuals from 14 families have been reported. The syndrome is caused by contiguous gene deletions on the short arm of chromosome 11 (11p11.2).","definition_xrefs":["Orphanet:52022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 11","termid":"MONDO:0016893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potocki-Shaffer syndrome","secondary_identifiers":["DOID:0111687","ICD9:758.39","SCTID:702346005","UMLS:C1832588","GARD:9762","icd11.foundation:1587521558","DECIPHER:34","MESH:C538356","MEDGEN:318657","OMIM:601224","NCIT:C75456"],"synonyms":[{"name":"11p11.2 deletion","type":"exact"},{"name":"Defect11 syndrome","type":"related"},{"name":"PSS","type":"related"},{"name":"Potocki-Shaffer syndrome","type":"exact"},{"name":"chromosome 11P11.2 deletion syndrome","type":"related"},{"name":"deletion of chromosome 11p11.2","type":"related"},{"name":"proximal 11P deletion syndrome","type":"related"},{"name":"proximal 11p deletion syndrome","type":"exact"}],"termid":"MONDO:0011022","xrefs":{"Monarch":{"xref_id":"0011022"}}}


id: MONDO:0006096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endometrial hyperplasia characterized by cytologic and architectural changes which may lead to endometrial carcinoma. Despite the atypical features and possible course, there is debate on whether to consider this a neoplasm. The relationship with endometrial intraepithelial neoplasia is also unclear.","definition_xrefs":["NCIT:C4654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical endometrial hyperplasia","secondary_identifiers":["ICD9:621.33","SCTID:277158007","EFO:1000098","UMLS:C0349579","MEDGEN:138105"],"synonyms":[{"name":"atypical hyperplasia of endometrium","type":"exact"},{"name":"atypical hyperplasia of the endometrium","type":"exact"},{"name":"endometrial hyperplasia with atypia","type":"exact"}],"termid":"MONDO:0006096","xrefs":{"Monarch":{"xref_id":"0006096"}}}


id: GO:0080108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.","definition_xrefs":["PMID:14871316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"S-alkylthiohydroximate lyase activity","synonyms":[{"name":"S-alkylthiohydroximate C-S lyase activity","type":"narrow"}],"termid":"GO:0080108"}


id: FYPO:0006677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at double-strand break sites by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:30104346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA binding","termid":"FYPO:0000658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased DNA binding at double-strand break","synonyms":[{"name":"decreased DNA binding at site of double-strand break","type":"exact"},{"name":"decreased double-stranded DNA break binding","type":"exact"},{"name":"reduced DNA binding at double-strand break","type":"exact"}],"termid":"FYPO:0006677"}


id: GO:0090635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The desmosomal part containing the desmosomal cadherins, desmogleins and desmocollins, that establish contact and adhere to neighboring cells in a Ca2+-dependent manner.","definition_xrefs":["PMID:20066089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"desmosome","termid":"GO:0030057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular core region of desmosome","synonyms":[{"name":"desmoglea","type":"exact"}],"termid":"GO:0090635"}


id: GO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pollen tube over time, from its initial formation to a mature structure.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube development","termid":"GO:0048868"}


id: MONDO:0700137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphosarcoma that occurs in a cow.","definition_xrefs":["NCIT:C134767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"},{"relation_name":"is_a","term_name":"lymphosarcoma, non-human animal","termid":"MONDO:1010209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine lymphosarcoma","termid":"MONDO:0700137","xrefs":{"Monarch":{"xref_id":"0700137"}}}


id: GO:0022007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directed cell movement in the neural plate resulting in tissue elongation via intercalation of adjacent cells in an epithelial sheet at the midline, leading to narrowing and lengthening of the neural plate.","definition_xrefs":["GOC:cls","GOC:dph","PMID:13679871","GOC:dgh","GOC:jid","PMID:15806586","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"neural plate elongation","termid":"GO:0014022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in neural plate elongation","termid":"GO:0022007"}


id: PBO:0088085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX (ubiquitin regulatory X) domain-containing protein; interacts with Cdc48p, transcription is repressed when cells are grown in media containing inositol and choline; UBX6 has a paralog, UBX7, that arose from the whole genome duplication","termid":"PBO:0088085"}


id: GO:0070388
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A procollagen-proline 4-dioxygenase complex that contains alpha subunits of the type III isoform.","definition_xrefs":["PMID:14500733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline 4-dioxygenase complex","termid":"GO:0016222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"procollagen-proline 4-dioxygenase complex, alpha(III) type","synonyms":[{"name":"procollagen-proline, 2-oxoglutarate-4-dioxygenase complex, alpha(III) type","type":"exact"},{"name":"prolyl 4-hydroxylase complex (alpha(III)-type)","type":"broad"}],"termid":"GO:0070388"}


id: GO:0051899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential decreases with respect to its steady-state potential, usually from negative potential to a more positive potential. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative steady-state resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:dh","Wikipedia:Depolarization"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization","secondary_identifiers":["Reactome:R-HSA-112308"],"termid":"GO:0051899"}


id: GO:0031698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-2 adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"beta-2 adrenergic receptor binding","synonyms":[{"name":"beta-2 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031698"}


id: MONDO:0009694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"myeloperoxidase deficiency","secondary_identifiers":["MEDGEN:96015","UMLS:C0398595","NANDO:1200358","GARD:3868","ICD9:288.8","MESH:C562864","Orphanet:2587","icd11.foundation:1933575033","NANDO:2200758","SCTID:234433009","OMIM:254600"],"synonyms":[{"name":"MPO deficiency","type":"exact"},{"name":"MPOD","type":"related"},{"name":"myeloperoxidase deficiency","type":"exact"}],"termid":"MONDO:0009694","xrefs":{"Monarch":{"xref_id":"0009694"}}}


id: PBO:0043755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 3","termid":"PBO:0043755"}


id: MONDO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated amyelia","secondary_identifiers":["icd11.foundation:1787577133","GARD:20976","Orphanet:268868"],"termid":"MONDO:0017088","xrefs":{"Monarch":{"xref_id":"0017088"}}}


id: MONDO:0024234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seckel like syndrome majoor-krakauer type","synonyms":[{"name":"Bird-headed dwarfism microcephaly micrognathia","type":"related"}],"termid":"MONDO:0024234","xrefs":{"Monarch":{"xref_id":"0024234"}}}


id: GO:0060727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060727)","synonyms":[{"name":"positive regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"positive regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060727"}


id: GO:0033780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taurochenodeoxycholate + O2 + reduced [NADPH--hemoprotein reductase] +  = taurohyocholate H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Acts on taurochenodeoxycholate, taurodeoxycholate and less readily on lithocholate and chenodeoxycholate.","definition_xrefs":["EC:1.14.14.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"taurochenodeoxycholate 6alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7977"],"synonyms":[{"name":"CYP3A4","type":"related"},{"name":"CYP4A21","type":"related"},{"name":"taurochenodeoxycholate 6alpha-monooxygenase activity","type":"related"},{"name":"taurochenodeoxycholate,NADPH:oxygen oxidoreductase (6alpha-hydroxylating) activity","type":"related"}],"termid":"GO:0033780"}


id: PBO:0075012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-23","termid":"PBO:0075012"}


id: GO:0005873
data:
  {"annotated_genes":["SJAG_01297","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105844,110228],"is_not":false,"summary":null,"term":"GO:0005873"}]},"cv_name":"cellular_component","definition":"Any complex that includes a dimer of molecules from the kinesin superfamily and any associated proteins, and moves towards the plus end of a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"plus-end kinesin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005873","terms_by_termid":{"GO:0005873":null}}


id: MONDO:1011247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal degeneration that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal degeneration, cattle","secondary_identifiers":["OMIA:000866-9913"],"termid":"MONDO:1011247","xrefs":{"Monarch":{"xref_id":"1011247"}}}


id: PBO:0045058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 1","termid":"PBO:0045058"}


id: GO:0018996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic shedding of part or all of a collagen and cuticulin-based cuticle, which is then replaced by a new collagen and cuticulin-based cuticle. An example of this is found in the Nematode worm, Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle, collagen and cuticulin-based cuticle","synonyms":[{"name":"collagen and cuticulin-based cuticle molting cycle","type":"exact"}],"termid":"GO:0018996"}


id: PBO:0057279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 500b","termid":"PBO:0057279"}


id: GO:0051790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a short-chain fatty acid. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"short-chain fatty acid biosynthetic process","synonyms":[{"name":"short chain fatty acid biosynthesis","type":"exact"},{"name":"short chain fatty acid biosynthetic process","type":"exact"},{"name":"short-chain fatty acid anabolism","type":"exact"},{"name":"short-chain fatty acid biosynthesis","type":"exact"},{"name":"short-chain fatty acid formation","type":"exact"},{"name":"short-chain fatty acid synthesis","type":"exact"}],"termid":"GO:0051790"}


id: MONDO:1010239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peripheral neuropathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular disease, non-human animal","termid":"MONDO:1012983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral neuropathy, non-human animal","secondary_identifiers":["OMIA:001150"],"termid":"MONDO:1010239","xrefs":{"Monarch":{"xref_id":"1010239"}}}


id: PBO:0029036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_surface","termid":"PBO:0029036"}


id: PBO:0049071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 88","termid":"PBO:0049071"}


id: GO:1901920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any peptidyl-tyrosine dephosphorylation that is involved in activation of protein kinase activity.","definition_xrefs":["PMID:1756737","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine dephosphorylation involved in activation of protein kinase activity (obsolete GO:1901920)","synonyms":[{"name":"peptidyl-tyrosine dephosphorylation involved in protein kinase activation","type":"related"}],"termid":"GO:1901920"}


id: PBO:0087771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome and SSU processome complexes; involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma; Small Subunit processome is also known as SSU processome","termid":"PBO:0087771"}


id: PR:O43062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4C3.09 gene.","definition_xrefs":["UniProtKB:O43062","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4C3.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.09","synonyms":[{"name":"Spom972h-SPBC4C3.09","type":"exact"}],"termid":"PR:O43062"}


id: MOD:00387
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and a glycine residue to form 2-tetrahydropyridinyl-5-imidazolinone glycine.","definition_xrefs":["PubMed:15628861","PubMed:10504696","RESID:AA0382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-tetrahydropyridinyl-5-imidazolinone glycine","synonyms":[{"name":"2-(3,4,5,6-tetrahydropyridin-2-yl)-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"2-(tetrahydropyrid-2-yl)-5-imidazolinone glycine","type":"exact"},{"name":"2-tetrahydropyridinyl-5-imidazolinone glycine","type":"exact"},{"name":"CROSSLNK 2-tetrahydro-2-pyridyl-5-imidazolinone (Lys-Gly)","type":"exact"},{"name":"Zoanthus sp. fluorescent protein zFP538 chromophore","type":"exact"},{"name":"[5-oxo-2-(3,4,5,6-tetrahydropyridin-2-yl)-4,5-dihydro-1H-imidazol-1-yl]acetic acid","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00387"}


id: MONDO:0008577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toe, misshapen","secondary_identifiers":["UMLS:C1861061","OMIM:189100","MEDGEN:396052"],"synonyms":[{"name":"toe, misshapen","type":"exact"}],"termid":"MONDO:0008577","xrefs":{"Monarch":{"xref_id":"0008577"}}}


id: PBO:0050523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D11","termid":"PBO:0050523"}


id: PBO:0081399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 239","termid":"PBO:0081399"}


id: PBO:0077223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane BAX inhibitor motif containing 7, pseudogene","termid":"PBO:0077223"}


id: MONDO:0010343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Asperger syndrome, susceptibility to","termid":"MONDO:0100440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asperger syndrome, X-linked, susceptibility to, 2","secondary_identifiers":["OMIM:300497"],"synonyms":[{"name":"ASPERGER syndrome, X-linked, susceptibility to, 2","type":"related"},{"name":"ASPGX2","type":"related"},{"name":"Asperger syndrome susceptibility, X-linked 2","type":"exact"},{"name":"Asperger syndrome, X-linked, susceptibility to, 2","type":"exact"},{"name":"Asperger syndrome, X-linked, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to X-linked asperger syndrome 2","type":"related"}],"termid":"MONDO:0010343","xrefs":{"Monarch":{"xref_id":"0010343"}}}


id: GO:0102003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (11Z,14Z)-icosadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (8Z,11Z,14Z)-icosatrienoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O or an (11Z,14Z,17Z)-icosatrienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (8Z,11Z,14Z,17Z)-eicosatetraenoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["EC:1.14.19.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acyl-lipid (11-3)-desaturase activity","synonyms":[{"name":"Delta(8)-desaturase","type":"exact"},{"name":"Delta8-sphingolipid desaturase activity","type":"exact"},{"name":"acyl-lipid 8-desaturase","type":"exact"}],"termid":"GO:0102003"}


id: GO:0070421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III and XRCC1, and is involved in base excision repair.","definition_xrefs":["PMID:15141024","PMID:7760816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA ligase III-XRCC1 complex","termid":"GO:0070421"}


id: GO:0046594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of maintaining mRNA in a specific location in the oocyte pole plasm. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of RNA location","termid":"GO:0051237"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of pole plasm mRNA location","secondary_identifiers":["GO:0048122"],"synonyms":[{"name":"maintenance of oocyte pole plasm mRNA localization","type":"exact"},{"name":"maintenance of pole plasm mRNA localization","type":"related"}],"termid":"GO:0046594"}


id: MONDO:0002698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A testicular mixed germ cell-sex cord-stromal tumor. It is usually associated with mixed gonadal dysgenesis and ambiguous genitalia. It is characterized by the presence of nests of large neoplastic germ cells and immature cells that resemble Sertoli cells.","definition_xrefs":["NCIT:C39911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"},{"relation_name":"is_a","term_name":"gonadoblastoma","termid":"MONDO:0010768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular gonadoblastoma","secondary_identifiers":["HP:0000030","UMLS:C1515283","MEDGEN:272839","DOID:3579"],"synonyms":[{"name":"gonadoblastoma of testis","type":"exact"},{"name":"testicular gonadoblastoma","type":"exact"},{"name":"testicular gonadoblastoma (disease)","type":"exact"},{"name":"testis gonadoblastoma","type":"exact"}],"termid":"MONDO:0002698","xrefs":{"Monarch":{"xref_id":"0002698"}}}


id: MONDO:0011617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthropathy, erosive","secondary_identifiers":["MEDGEN:342978","UMLS:C1853829","MESH:C565273","OMIM:605935"],"synonyms":[{"name":"arthropathy, erosive","type":"exact"}],"termid":"MONDO:0011617","xrefs":{"Monarch":{"xref_id":"0011617"}}}


id: MONDO:0003769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastritis resulting from herpes virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral gastritis","termid":"MONDO:0002270"},{"relation_name":"is_a","term_name":"Herpesviridae infectious disease","termid":"MONDO:0005794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"herpetic gastritis","secondary_identifiers":["DOID:6102","MEDGEN:272714","NCIT:C27341","UMLS:C1333996"],"synonyms":[{"name":"Herpesviridae caused viral gastritis","type":"exact"},{"name":"Herpesviridae viral gastritis","type":"exact"}],"termid":"MONDO:0003769","xrefs":{"Monarch":{"xref_id":"0003769"}}}


id: GO:0047184
data:
  {"annotated_genes":["SJAG_04792"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78713],"is_not":false,"summary":null,"term":"GO:0047184"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine + acyl-CoA = phosphatidylcholine + CoA.","definition_xrefs":["EC:2.3.1.23","MetaCyc:2.3.1.23-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-acylglycerophosphocholine O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:12937","GO:0000507","Reactome:R-HSA-1482794"],"synonyms":[{"name":"1-acyl-sn-glycero-3-phosphocholine acyltransferase activity","type":"related"},{"name":"acyl coenzyme A-monoacylphosphatidylcholine acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-acyl-glycero-3-phosphocholine transacylase activity","type":"related"},{"name":"acyl-CoA:1-acyl-sn-glycero-3-phosphocholine O-acyltransferase activity","type":"related"},{"name":"lysolecithin acyltransferase activity","type":"related"},{"name":"lysophosphatide acyltransferase activity","type":"related"},{"name":"lysophosphatidylcholine acyltransferase activity","type":"related"}],"termid":"GO:0047184","terms_by_termid":{"GO:0047184":null}}


id: GO:0052169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism modulates the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response (obsolete GO:0052169)","synonyms":[{"name":"pathogen-associated molecular pattern dependent modulation by symbiont of host innate immunity","type":"exact"}],"termid":"GO:0052169"}


id: FYPO:0007942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin  loop  formation  during meiotic prophase I results in  chromatin loops of increased length.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin loop formation during meiotic prophase I","termid":"FYPO:0007944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"increased length of chromatin loops during meiotic prophase I","termid":"FYPO:0007942"}


id: GO:0102643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: scalarane-17alpha-19-diol = all-trans-geranylfarnesol + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete scalarane-17alpha-19-diol synthase activity (obsolete GO:0102643)","termid":"GO:0102643"}


id: PBO:0048082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 3","termid":"PBO:0048082"}


id: PBO:0045562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 11","termid":"PBO:0045562"}


id: PBO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1 (predicted)","termid":"PBO:0015713"}


id: MONDO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Neoplasms composed of primordial germ cells of embryonic gonads or of elements of the germ layers of the embryo, mammalian. The concept does not refer to neoplasms located in the gonads or present in an embryo or fetus.","definition_xrefs":["MESH:D009373"],"gene_count":0,"genotype_count":0,"name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","secondary_identifiers":["DOID:3095"],"synonyms":[{"name":"germ cell and embryonal neoplasm","type":"related"}],"termid":"MONDO:0002510","xrefs":{"Monarch":{"xref_id":"0002510"}}}


id: MONDO:0017833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267","MONDO:0005570"],"is_obsolete":false,"name":"primary hypereosinophilic syndrome","secondary_identifiers":["UMLS:C5679898","GARD:21395","MEDGEN:1830089","Orphanet:314950"],"synonyms":[{"name":"HES-M","type":"exact"},{"name":"HES-N","type":"exact"},{"name":"clonal hypereosinophilic syndrome","type":"exact"},{"name":"neoplastic hypereosinophilic syndrome","type":"exact"},{"name":"primary HES","type":"exact"}],"termid":"MONDO:0017833","xrefs":{"Monarch":{"xref_id":"0017833"}}}


id: MONDO:0027068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mitochondrial complex 1 deficiency, mitochondrial type 1, in which the cause of the disease is a mutation in the MTND3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disease","termid":"MONDO:0000001"},{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, mitochondrial type","termid":"MONDO:0100134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, mitochondrial type 1","secondary_identifiers":["DOID:0112101","MEDGEN:1648371","UMLS:C4746992","OMIM:500014"],"synonyms":[{"name":"MC1DM1","type":"exact"},{"name":"mitochondrial complex I deficiency, mitochondrial type 1","type":"exact"}],"termid":"MONDO:0027068","xrefs":{"Monarch":{"xref_id":"0027068"}}}


id: MONDO:1011457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, non-human animal","secondary_identifiers":["OMIA:000411"],"termid":"MONDO:1011457","xrefs":{"Monarch":{"xref_id":"1011457"}}}


id: GO:0017143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving insecticides, chemicals used to kill insects.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"},{"relation_name":"part_of","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"insecticide metabolic process","secondary_identifiers":["GO:0017138"],"synonyms":[{"name":"insecticide metabolism","type":"exact"}],"termid":"GO:0017143"}


id: MONDO:0060650
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87020],"is_not":false,"summary":null,"term":"MONDO:0060650"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"retinal ciliopathy","termid":"MONDO:0022410"},{"relation_name":"is_a","term_name":"TUBB4B-related ciliopathy","termid":"MONDO:1060115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis with early-onset deafness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1646810","DOID:0112240","UMLS:C4693498","OMIM:617879"],"synonyms":[{"name":"LCAEOD","type":"related"},{"name":"Leber congenital amaurosis with early-onset deafness","type":"exact"}],"termid":"MONDO:0060650","terms_by_termid":{"MONDO:0060650":null},"xrefs":{"Monarch":{"xref_id":"0060650"}}}


id: GO:0060280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:kmv","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of ovulation","termid":"GO:0060278"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ovulation","termid":"GO:0060280"}


id: GO:0019520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving aldonic acid, a monocarboxylic acid with a chain of three or more carbon atoms, derived from an aldose by oxidation of the aldehydic group.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete aldonic acid metabolic process (obsolete GO:0019520)","synonyms":[{"name":"aldonic acid metabolism","type":"exact"}],"termid":"GO:0019520"}


id: MONDO:0008907
data:
  {"annotated_genes":["SJAG_02783"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86920],"is_not":false,"summary":null,"term":"MONDO:0008907"}]},"cv_name":"mondo","definition":"The most frequent form of congenital disorder of N-glycosylation and is characterized by cerebellar dysfunction, abnormal fat distribution, inverted nipples, strabismus and hypotonia. 3 forms of PMM2-CDG can be distinguished: the infantile multisystem type, late-infantile and childhood ataxia-intellectual disability type (3-10 yrs old), and the adult stable disability type. Infants usually develop ataxia, psychomotor delay and extraneurological manifestations including failure to thrive, enteropathy, hepatic dysfunction, coagulation abnormalities and cardiac and renal involvement. The phenotype is however highly variable and ranges from infants who die in the first year of life to mildly involved adults.","definition_xrefs":["Orphanet:79318"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02783":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"PMM2-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C126868","DOID:0080552","SCTID:459063003","GARD:9826","MESH:C535739","NORD:1585","UMLS:C0349653","OMIM:212065","MEDGEN:138111"],"synonyms":[{"name":"CDG 1A","type":"exact"},{"name":"CDG syndrome type Ia","type":"exact"},{"name":"CDG-IA","type":"exact"},{"name":"CDG1A","type":"exact"},{"name":"Jaeken syndrome","type":"related"},{"name":"PMM2-CDG","type":"exact"},{"name":"PMM2-CDG (CDG-Ia)","type":"related"},{"name":"PMM2-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ia","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1A","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1A (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type Ia","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type Ia, formerly","type":"related"},{"name":"congenital disorder of glycosylation type 1a","type":"exact"},{"name":"congenital disorder of glycosylation type Ia","type":"exact"},{"name":"congenital disorder of glycosylation, type Ia","type":"related"},{"name":"phosphomannomutase 2 deficiency","type":"exact"}],"termid":"MONDO:0008907","terms_by_termid":{"MONDO:0008907":null},"xrefs":{"Monarch":{"xref_id":"0008907"}}}


id: PBO:0089475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate-dependent transferase, unknown specificity, implicated in sulfur compound metabolism","termid":"PBO:0089475"}


id: MONDO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease in childhood and adulthood associated with a systemic vasculitis (obsolete MONDO:0017038)","secondary_identifiers":["Orphanet:264973"],"synonyms":[{"name":"secondary ILD in childhood and adulthood associated with a systemic vasculitis","type":"exact"}],"termid":"MONDO:0017038","xrefs":{"Monarch":{"xref_id":"0017038"}}}


id: PBO:0121091
data:
  {"annotated_genes":["SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"pombase_family_or_domain":[{"annotations":[56577],"is_not":false,"summary":null,"term":"PBO:0121091"}]},"cv_name":"pombase_family_or_domain","gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":0,"is_obsolete":false,"name":"warning frameshifted","termid":"PBO:0121091","terms_by_termid":{"PBO:0121091":null}}


id: PR:C6Y4A5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.19 gene.","definition_xrefs":["UniProtKB:C6Y4A5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6F6.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.19","synonyms":[{"name":"Spom972h-SPAC6F6.19","type":"exact"}],"termid":"PR:C6Y4A5"}


id: PBO:0071545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 10","termid":"PBO:0071545"}


id: PR:Q9UUA9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-rRNA-processing protein TSR2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21250:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein tsr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.15","secondary_identifiers":["UniProtKB:Q9UUA9"],"synonyms":[{"name":"SPBC409.15","type":"related"},{"name":"Spom972h-TSR2","type":"exact"}],"termid":"PR:Q9UUA9"}


id: GO:0032668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-24 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-24 production","termid":"GO:0032628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-24 production","secondary_identifiers":["GO:0045528"],"synonyms":[{"name":"regulation of IL-24 production","type":"exact"},{"name":"regulation of interleukin-24 biosynthetic process","type":"narrow"}],"termid":"GO:0032668"}


id: PBO:0030513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_purvalanol_A","termid":"PBO:0030513"}


id: GO:0006513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Addition of a single ubiquitin group to a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein monoubiquitination","synonyms":[{"name":"protein monoubiquitinylation","type":"exact"},{"name":"protein monoubiquitylation","type":"exact"}],"termid":"GO:0006513"}


id: MONDO:0018769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intestinal infection with Isospora belli.","definition_xrefs":["NCIT:C4076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coccidiosis","termid":"MONDO:0005707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isosporiasis","secondary_identifiers":["GARD:3033","ICD10CM:A07.3","MESH:D021865","MEDGEN:90233","Orphanet:472","DOID:2112","MedDRA:10023076","EFO:0007232","icd11.foundation:137713224","UMLS:C0311386","SCTID:371423007"],"synonyms":[{"name":"Cystoisospora belli caused disease or disorder","type":"exact"},{"name":"Cystoisospora belli disease or disorder","type":"exact"},{"name":"Cystoisospora belli infectious disease","type":"exact"},{"name":"Isosporosis","type":"exact"},{"name":"cystoisosporiasis","type":"exact"},{"name":"infection by Isospora belli and Isospora hominis","type":"related"}],"termid":"MONDO:0018769","xrefs":{"Monarch":{"xref_id":"0018769"}}}


id: GO:0035825
data:
  {"annotated_genes":["SJAG_01138","SJAG_01495","SJAG_01044","SJAG_03720","SJAG_05295","SJAG_02294","SJAG_05239","SJAG_02616","SJAG_02465","SJAG_02724","SJAG_00757","SJAG_03438","SJAG_07002","SJAG_02295","SJAG_02822","SJAG_00727","SJAG_04950","SJAG_01410","SJAG_00266","SJAG_04303","SJAG_02226","SJAG_01677","SJAG_03097","SJAG_03567","SJAG_00172","SJAG_02490","SJAG_02828","SJAG_01419","SJAG_02460","SJAG_02267","SJAG_03699","SJAG_01401","SJAG_02311","SJAG_03751","SJAG_00623","SJAG_00100","SJAG_00377","SJAG_02079","SJAG_00980","SJAG_00908","SJAG_03525","SJAG_05333","SJAG_00247","SJAG_03221","SJAG_01156","SJAG_04748","SJAG_04205","SJAG_02181","SJAG_00935","SJAG_03048","SJAG_02708","SJAG_03219","SJAG_05373","SJAG_04816","SJAG_02652","SJAG_02592","SJAG_01076","SJAG_01708","SJAG_02556","SJAG_02339","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58075],"is_not":false,"summary":null,"term":"GO:0035825"},{"annotations":[109944],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[109633,90490,118797,91109,101005],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[108603,117020,91239,98128,99369,101069,112288,118800,91112,112810,110489,89877,108036,102540,120783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007534"},{"annotations":[111628,92283,106842,113119,110724],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[109635,112290],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[91240,102506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006311"},{"annotations":[64377,119107,80704,90431,109636,98865,112291,103482],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[102508,80707,90432],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[109947],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[110337,104332],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[91008],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[93419,92752,103102,106806,117539,72935,81255,102543,106285,91545,102606,94627,108696,94700,71075,105821,79662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007131"},{"annotations":[103581,118284,96325,119078,91116],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[73637,119303,119450,76819,111063,81183,76225,78718,112314,110124],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[118232],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"A DNA recombination process that results in the exchange of an equal amount of genetic material between highly homologous DNA molecules.","definition_xrefs":["PMID:11139492","PMID:17304215","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA 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recombination","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Chromosomal_crossover"],"synonyms":[{"name":"chromosomal crossover","type":"related"},{"name":"interchromosomal DNA recombination","type":"exact"},{"name":"interstrand DNA recombination","type":"exact"},{"name":"reciprocal DNA recombination","type":"narrow"}],"termid":"GO:0035825","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0006311":null,"GO:0007131":null,"GO:0007534":null,"GO:0010520":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0035825":null,"GO:0045128":null,"GO:0062209":null,"GO:1905263":null,"GO:1990918":null}}


id: FYPO:0003406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of methylglyoxal than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to methylglyoxal","synonyms":[{"name":"resistance to MG","type":"broad"},{"name":"resistance to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"resistance to methylglyoxal during vegetative growth","type":"exact"},{"name":"resistant to methylglyoxal","type":"exact"}],"termid":"FYPO:0003406"}


id: PBO:0071845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 40","termid":"PBO:0071845"}


id: PBO:0067826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 128","termid":"PBO:0067826"}


id: GO:0045292
data:
  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joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.","definition_xrefs":["ISBN:0879695897","GOC:krc","PMID:18458335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via 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id: FYPO:0001319
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  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121154,121155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[121147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[121318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[121356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[121145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":5,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"normal cellular process during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_04883","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ptp4delta","dcr1delta"],"synonyms":[{"name":"normal cellular process during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001319","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: MONDO:0006858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the mouth.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouth disorder","secondary_identifiers":["UMLS:C0026636","NCIT:C3240","EFO:1001047","ICD9:528.9","MEDGEN:6448","MESH:D009059","DOID:403","SCTID:118938008"],"synonyms":[{"name":"disease of mouth","type":"exact"},{"name":"disease or disorder of mouth","type":"exact"},{"name":"disorder of mouth","type":"exact"},{"name":"mouth disease","type":"exact"},{"name":"mouth disease or disorder","type":"exact"},{"name":"oral disease","type":"exact"},{"name":"oral disorder","type":"exact"}],"termid":"MONDO:0006858","xrefs":{"Monarch":{"xref_id":"0006858"}}}


id: GO:0102104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4-coumaroyl)acetyl-CoA + feruloyl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete demethoxycurcumin synthase (obsolete GO:0102104)","termid":"GO:0102104"}


id: MONDO:1011992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital keratoconjunctivitis sicca and ichthyosiform dermatosis, non-human animal","secondary_identifiers":["OMIA:001683"],"termid":"MONDO:1011992","xrefs":{"Monarch":{"xref_id":"1011992"}}}


id: PBO:0028715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index_in_stationary_phase","termid":"PBO:0028715"}


id: GO:0016363
data:
  {"annotated_genes":["SJAG_03025","SJAG_02661"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57692,81424],"is_not":false,"summary":null,"term":"GO:0016363"}]},"cv_name":"cellular_component","definition":"A dynamic, proteinaceous framework within the nucleus of eukaryotic cells, composed of proteins and RNA, that provides structural support for chromatin organization, gene regulation, and nuclear processes.","definition_xrefs":["PMID:3058729","PMID:39789220","PMID:15608168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02661":null,"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear matrix","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null},"secondary_identifiers":["Wikipedia:Nuclear_matrix"],"synonyms":[{"name":"nucleoskeleton","type":"exact"}],"termid":"GO:0016363","terms_by_termid":{"GO:0016363":null}}


id: GO:0035706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a T-helper 1 cell in response to an external stimulus.","definition_xrefs":["GOC:BHF","CL:0000545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell chemotaxis","synonyms":[{"name":"Th1 cell chemotaxis","type":"exact"}],"termid":"GO:0035706"}


id: PR:O74728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1709.03 gene.","definition_xrefs":["UniProtKB:O74728","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized endoplasmic reticulum membrane protein C1709.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.03","synonyms":[{"name":"Spom972h-SPBC1709.03","type":"exact"}],"termid":"PR:O74728"}


id: PBO:0070349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 22","termid":"PBO:0070349"}


id: PBO:0120357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage control phosphatase 1","termid":"PBO:0120357"}


id: PBO:0053383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 310","termid":"PBO:0053383"}


id: PBO:0064985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 2","termid":"PBO:0064985"}


id: PBO:0054587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1990","termid":"PBO:0054587"}


id: GO:0051794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of catagen","synonyms":[{"name":"regulation of catagen","type":"related"}],"termid":"GO:0051794"}


id: GO:0008004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A layer of the basal lamina that contains collagen fibrils and connects the basal lamina to the underlying connective tissue.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete lamina reticularis (obsolete GO:0008004)","termid":"GO:0008004"}


id: MONDO:0014253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare, primary immunodeficiency. It is caused by a currently undetermined defect in the Fas-induced apoptosis pathway. No mutations in Fas, FASLG or CASP10 are detectable. Disruption of Fas-induced apoptosis impairs lymphocyte homeostasis and immune tolerance. Characteristic laboratory findings include an increase in circulating, double-negative (CD4-/CD8-) T cells in the setting of immune-mediated anemia, thrombocytopenia and neutropenia. Clinical signs present in childhood include fatigue, pallor, bruising, hepatosplenomegaly and chronic, non-malignant, non-infectious lymphadenopathy. The clinical course is influenced by a strong association with other autoimmune disorders and an increased risk for developing Hodgkin and non-Hodgkin lymphoma.","definition_xrefs":["NCIT:C39577"],"gene_count":0,"genotype_count":0,"name":"obsolete autoimmune lymphoproliferative syndrome type 3 (obsolete MONDO:0014253)","secondary_identifiers":["NANDO:2200743"],"synonyms":[{"name":"ALPS-U","type":"exact"},{"name":"ALPS3","type":"exact"},{"name":"CVID9","type":"exact"},{"name":"PRKCD autoimmune lymphoproliferative syndrome","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome caused by mutation in PRKCD","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type III","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome, type 3","type":"related"},{"name":"autoimmune lymphoproliferative syndrome, type III","type":"related"},{"name":"autoimmune lymphoproliferative syndrome-undetermined variant","type":"exact"},{"name":"common variable immunodeficiency 9","type":"exact"},{"name":"immunodeficiency, common variable, 9","type":"related"},{"name":"immunodeficiency, common variable, 9, formerly","type":"related"},{"name":"type 3 ALPS","type":"exact"}],"termid":"MONDO:0014253","xrefs":{"Monarch":{"xref_id":"0014253"}}}


id: GO:0006140
data:
  {"annotated_genes":["SJAG_02785","SJAG_00685","SJAG_05314","SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74975,78030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[120009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"},{"annotations":[91641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[71907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[78029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nucleotide metabolism","type":"exact"}],"termid":"GO:0006140","terms_by_termid":{"GO:0006110":null,"GO:0043456":null,"GO:0045820":null,"GO:1905707":null,"GO:1905857":null}}


id: PBO:0086518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; null mutant displays increased levels of spontaneous Rad52 foci","termid":"PBO:0086518"}


id: PBO:0048829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 13","termid":"PBO:0048829"}


id: MONDO:0008392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Roussy-Levy syndrome","secondary_identifiers":["GARD:4741","UMLS:C0205713","ICD9:334.3","SCTID:45853006","Orphanet:3115","icd11.foundation:1790389383","MEDGEN:64430","NORD:1679","OMIM:180800"],"synonyms":[{"name":"Charcot-Marie-Tooth disease (variant)","type":"related"},{"name":"Charcot-Marie-Tooth-Roussy-levy disease","type":"related"},{"name":"HMSN I","type":"related"},{"name":"Roussy Lévy Syndrome","type":"exact"},{"name":"Roussy levy hereditary areflexic dystasia","type":"related"},{"name":"Roussy levy syndrome","type":"exact"},{"name":"Roussy-Lévy syndrome","type":"exact"},{"name":"Roussy-levy disease","type":"exact"},{"name":"Roussy-levy hereditary areflexic dystasia","type":"related"},{"name":"Roussy-levy syndrome","type":"exact"},{"name":"hereditary areflexic dystasia","type":"related"},{"name":"hereditary areflexic dystasia, Roussy-Lévy type","type":"exact"},{"name":"hereditary areflexic dystasia, Roussy-levy type","type":"exact"},{"name":"hereditary motor sensory neuropathy I","type":"related"}],"termid":"MONDO:0008392","xrefs":{"Monarch":{"xref_id":"0008392"}}}


id: PBO:0028488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_index","termid":"PBO:0028488"}


id: PBO:0071398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 4","termid":"PBO:0071398"}


id: PBO:0042172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCN2 antisense RNA 1","termid":"PBO:0042172"}


id: PBO:0076890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 44","termid":"PBO:0076890"}


id: GO:0097566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of four basal bodies found in Giardia species (trophozoite stage). It comprises the left lateral basal body pair and the left middle basal body pair (i.e. the anterior, ventral, caudal and posteriolateral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally).","definition_xrefs":["PMID:16607022","ISBN:9780124260207","PMID:5961344","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left tetrad","termid":"GO:0097566"}


id: PBO:0005670
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.12","termid":"PBO:0005670"}


id: PBO:0048157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 3","termid":"PBO:0048157"}


id: MONDO:0005627
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the head and neck. Representative examples include oral cavity squamous cell carcinoma, laryngeal squamous cell carcinoma, and salivary gland carcinoma.","definition_xrefs":["NCIT:C4013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"head and neck cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0006859","DOID:11934","MEDGEN:78920","UMLS:C0278996"],"synonyms":[{"name":"cancer of craniocervical region","type":"exact"},{"name":"cancer of head and neck","type":"exact"},{"name":"cancer of the head and neck","type":"exact"},{"name":"craniocervical region cancer","type":"exact"},{"name":"head and neck cancer","type":"exact"},{"name":"head and neck malignant neoplasia","type":"exact"},{"name":"head and neck neoplasm","type":"broad"},{"name":"head and neck tumors","type":"broad"},{"name":"head and neck tumours","type":"broad"},{"name":"head/neck neoplasm","type":"broad"},{"name":"malignant craniocervical region neoplasm","type":"exact"},{"name":"malignant head and neck neoplasm","type":"exact"},{"name":"malignant head and neck tumor","type":"exact"},{"name":"malignant head and neck tumour","type":"exact"},{"name":"malignant neoplasm of craniocervical region","type":"exact"},{"name":"malignant neoplasm of head and neck","type":"exact"},{"name":"malignant neoplasm of the head and neck","type":"exact"},{"name":"malignant tumor of head and neck","type":"exact"},{"name":"malignant tumor of the head and neck","type":"exact"},{"name":"malignant tumour of head and neck","type":"exact"},{"name":"malignant tumour of the head and neck","type":"exact"},{"name":"tumour of head and neck","type":"broad"}],"termid":"MONDO:0005627","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0005627"}}}


id: PBO:0050532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxyphenylpyruvate dioxygenase like","termid":"PBO:0050532"}


id: MONDO:0004306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade malignant bone-forming mesenchymal neoplasm that produces osteoid and occurs in childhood. It arises from the medullary portion of the bone. It affects the long bones, and most commonly, the distal femur, proximal tibia, and proximal humerus. Pain with or without a palpable mass is the most common clinical presentation. It usually has an aggressive growth and may metastasize through the hematogenous route. The lung is the most frequent site of metastasis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric osteosarcoma","termid":"MONDO:0002623"},{"relation_name":"is_a","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood intracortical osteosarcoma","secondary_identifiers":["UMLS:C1332974","DOID:7612","MEDGEN:232350","NCIT:C6590"],"synonyms":[{"name":"childhood conventional osteosarcoma","type":"exact"},{"name":"childhood intracortical osteosarcoma","type":"exact"}],"termid":"MONDO:0004306","xrefs":{"Monarch":{"xref_id":"0004306"}}}


id: GO:0010775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate resulting in meiotic recombination.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand invasion","termid":"GO:0000708"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"meiotic strand invasion involved in meiotic gene conversion","termid":"GO:0010775"}


id: PBO:0042900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 4","termid":"PBO:0042900"}


id: MONDO:0010900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"intrauterine growth retardation with increased mitomycin c sensitivity","secondary_identifiers":["GARD:5593","MESH:C536744","MEDGEN:419040","UMLS:C2931307","OMIM:600546"],"synonyms":[{"name":"intrauterine growth retardation with increased mitomycin c sensitivity","type":"exact"}],"termid":"MONDO:0010900","xrefs":{"Monarch":{"xref_id":"0010900"}}}


id: MONDO:0010854
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89084],"is_not":false,"summary":null,"term":"MONDO:0010854"}]},"cv_name":"mondo","definition":"Oculo-ectodermal syndrome (OES) is characterized by the association of epibulbar dermoids and aplasia cutis congenital.","definition_xrefs":["Orphanet:3339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Toriello-Lacassie-Droste syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:600268","UMLS:C1838329","MESH:C563969","MEDGEN:333068","DOID:0111705","SCTID:723554006","GARD:10366","icd11.foundation:1983176633"],"synonyms":[{"name":"Toriello Lacassie Droste syndrome","type":"related"},{"name":"aplasia cutis congenita with epibulbar dermoids","type":"related"},{"name":"aplasia cutis congenita-epibulbar dermoids syndrome","type":"exact"},{"name":"oculo-ectodermal syndrome","type":"related"},{"name":"oculoectodermal syndrome","type":"exact"},{"name":"oculoectodermal syndrome, somatic","type":"exact"},{"name":"oes","type":"related"}],"termid":"MONDO:0010854","terms_by_termid":{"MONDO:0010854":null},"xrefs":{"Monarch":{"xref_id":"0010854"}}}


id: PR:Q09838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:12637524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulator prz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.13c","secondary_identifiers":["UniProtKB:Q09838","PR:000027514"],"synonyms":[{"name":"SPAC4G8.13C","type":"related"},{"name":"Spom972h-prz1","type":"exact"}],"termid":"PR:Q09838"}


id: GO:0098898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the dense core granule membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"dense core granule lumen","synonyms":[{"name":"dense core vesicle lumen","type":"exact"}],"termid":"GO:0098898"}


id: PBO:0068303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 7 pseudogene 1","termid":"PBO:0068303"}


id: PBO:0007885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein Slm1 (predicted)","termid":"PBO:0007885"}


id: PBO:0040449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10B (putative)","termid":"PBO:0040449"}


id: PR:Q09914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho1 gene.","definition_xrefs":["UniProtKB:Q09914","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.04","synonyms":[{"name":"Spom972h-rho1","type":"exact"}],"termid":"PR:Q09914"}


id: GO:1902617
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115740],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoride stimulus.","definition_xrefs":["GOC:kmv","GO_REF:0000071","GOC:TermGenie","PMID:8138152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fluoride","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902617","terms_by_termid":{"GO:0140114":null}}


id: PBO:0045136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAAF4-CCPG1 readthrough (NMD candidate)","termid":"PBO:0045136"}


id: GO:0032493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipoprotein stimulus.","definition_xrefs":["GOC:add","PMID:12077222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bacterial lipoprotein","termid":"GO:0032493"}


id: PBO:0045958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor","termid":"PBO:0045958"}


id: MONDO:0030992
data:
  {"annotated_genes":["SJAG_04161"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87484],"is_not":false,"summary":null,"term":"MONDO:0030992"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04161":null},"genotype_count":0,"is_obsolete":false,"name":"short stature, oligodontia, dysmorphic facies, and motor delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543206","OMIM:619234","MEDGEN:1787876"],"synonyms":[{"name":"SOFM","type":"exact"}],"termid":"MONDO:0030992","terms_by_termid":{"MONDO:0030992":null},"xrefs":{"Monarch":{"xref_id":"0030992"}}}


id: GO:0044098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of DNA by a cell, via the type IV secretion system.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by the type IV secretion system","termid":"GO:0044097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"DNA secretion by the type IV secretion system","synonyms":[{"name":"DNA secretion via the type IV secretion system","type":"exact"}],"termid":"GO:0044098"}


id: MONDO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of maxillary sinusitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maxillary sinusitis","termid":"MONDO:0005842"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute maxillary sinusitis","secondary_identifiers":["ICD10CM:J01.0","icd11.foundation:1617309258","SCTID:68272006","UMLS:C0155804","MEDGEN:510086","ICD9:461.0","DOID:2050"],"synonyms":[{"name":"acute antritis","type":"exact"},{"name":"maxillary sinusitis, acute","type":"exact"}],"termid":"MONDO:0002186","xrefs":{"Monarch":{"xref_id":"0002186"}}}


id: GO:0018039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glutamine amide by hydrolysis and oxidation of an interior Gln-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0086"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glutamine amidation (obsolete GO:0018039)","termid":"GO:0018039"}


id: RO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure its axon forms (chemical) synapses in.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_presynaptic_terminal_in","termid":"RO:0002113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axon_synapses_in","termid":"RO:0002102"}


id: PBO:0069950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1243, pseudogene","termid":"PBO:0069950"}


id: PBO:0071198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 39","termid":"PBO:0071198"}


id: PBO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 48","termid":"PBO:0045858"}


id: PBO:0073754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 9","termid":"PBO:0073754"}


id: PBO:0038553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 8","termid":"PBO:0038553"}


id: GO:0014728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the force of skeletal muscle contraction. The force of skeletal muscle contraction is produced by acto-myosin interaction processes through the formation of cross bridges.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by chemo-mechanical energy conversion","termid":"GO:0014862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of skeletal muscle contraction","termid":"GO:0014728"}


id: PBO:0078056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 46","termid":"PBO:0078056"}


id: PBO:0046002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX pseudogene 2","termid":"PBO:0046002"}


id: FYPO:0000489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion distribution is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal mitochondrial distribution","synonyms":[{"name":"abnormal mitochondrial distribution during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial distribution during vegetative growth","type":"exact"},{"name":"mitochondrial distribution: abnormal","type":"related"}],"termid":"FYPO:0000489"}


id: PBO:0071431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 37","termid":"PBO:0071431"}


id: PBO:0004317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aberrent Microtubules when Overexpressed","termid":"PBO:0004317"}


id: MONDO:0020568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myiasis","termid":"MONDO:0019147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous myiasis","secondary_identifiers":["MEDGEN:507962","Orphanet:99983","SCTID:240877000","UMLS:C0027031","icd11.foundation:1342682193","GARD:19723","ICD10CM:B87.0"],"termid":"MONDO:0020568","xrefs":{"Monarch":{"xref_id":"0020568"}}}


id: MONDO:0016152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of calpain (obsolete MONDO:0016152)","secondary_identifiers":["Orphanet:207104"],"termid":"MONDO:0016152","xrefs":{"Monarch":{"xref_id":"0016152"}}}


id: GO:2000998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cellulose catabolic process","termid":"GO:2000997"},{"relation_name":"negatively_regulates","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellulose catabolic process","synonyms":[{"name":"negative regulation of cellulose breakdown","type":"exact"},{"name":"negative regulation of cellulose catabolism","type":"exact"},{"name":"negative regulation of cellulose degradation","type":"exact"}],"termid":"GO:2000998"}


id: PBO:0049900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 1","termid":"PBO:0049900"}


id: PBO:0036291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane-associated ribosome receptor Mba1 (predicted)","termid":"PBO:0036291"}


id: GO:0061712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N(6)-L-threonylcarbamoyladenine(37) in tRNA + sulfur-(sulfur carrier) + 2 S-adenosyl-L-methionine = 2-methylthio-N(6)-L-threonylcarbamoyladenine(37) in tRNA + S-adenosyl-L-homocysteine + (sulfur carrier) + L-methionine + 5'-deoxyadenosine.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase (obsolete GO:0061712)","termid":"GO:0061712"}


id: PBO:0113472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; TORC2 also regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; interacts with Slm1p and Slm2p, homologous PH domain-containing TORC2 substrates; BIT2 has a paralog, BIT61, that arose from the whole genome duplication","termid":"PBO:0113472"}


id: PBO:0044092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member B1, pseudogene","termid":"PBO:0044092"}


id: PBO:0108990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin like 1","termid":"PBO:0108990"}


id: FYPO:0006041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic metaphase chromosome recapture is decreased.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased rate of mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased rate of chromosome recapture during mitosis","type":"exact"},{"name":"decreased rate of chromosome recapture during mitotic metaphase","type":"exact"},{"name":"decreased rate of kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"decreased rate of metaphase chromosome recapture during mitotic cell cycle","type":"related"},{"name":"decreased rate of mitotic kinetochore retrieval","type":"exact"},{"name":"decreased rate of mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"decreased rate of mitotic sister kinetochore recapture","type":"exact"},{"name":"increased time to mitotic metaphase chromosome recapture","type":"related"},{"name":"reduced rate of mitotic metaphase chromosome recapture","type":"exact"}],"termid":"FYPO:0006041"}


id: PBO:0074057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 36","termid":"PBO:0074057"}


id: PBO:0060267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 1","termid":"PBO:0060267"}


id: PBO:0085609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cytochrome c oxidase (Complex IV) assembly; involved in delivery of copper to Complex IV; also required for efficient formation of respiratory supercomplexes comprised of Complexes III and IV; localizes to the mitochondrial intermembrane space; ortholog implicated in cardiac defects in zebrafish and human; transcription is induced in response to the DNA-damaging agent MMS; protein abundance increases in response to DNA replication stress","termid":"PBO:0085609"}


id: FYPO:0003002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is decreased during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during mitotic metaphase","termid":"FYPO:0006175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to centromere during mitotic metaphase","synonyms":[{"name":"decreased protein localisation to centromere during mitotic metaphase","type":"exact"},{"name":"decreased protein localisation to chromosome, centromeric region during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to centromere during metaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centric region during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric region during mitotic metaphase","type":"exact"},{"name":"reduced protein localization to centromere during mitotic metaphase","type":"exact"}],"termid":"FYPO:0003002"}


id: GO:0046023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase III promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase III promoter during mitotic cell cycle (obsolete GO:0046023)","synonyms":[{"name":"mitotic regulation of transcription from Pol III promoter","type":"exact"},{"name":"regulation of transcription from Pol III promoter, mitotic","type":"exact"},{"name":"regulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"}],"termid":"GO:0046023"}


id: PBO:0113030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis; H3-H4 histone chaperone, downstream of Pol32p, involved in the transfer of parental histones to the lagging strand during DNA replication","termid":"PBO:0113030"}


id: MONDO:0011779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal atresia, encephalocele, and limb deformities","secondary_identifiers":["MEDGEN:335504","MESH:C564620","OMIM:607132","UMLS:C1846721"],"synonyms":[{"name":"Lel","type":"related"},{"name":"laryngeal atresia, encephalocele, and limb deformities","type":"exact"}],"termid":"MONDO:0011779","xrefs":{"Monarch":{"xref_id":"0011779"}}}


id: PBO:0088713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circularly permuted 1,3-beta-glucanase","termid":"PBO:0088713"}


id: MONDO:0019979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unilateral renal hypoplasia is a form of renal hypoplasia, a renal developmental anomaly in which one kidney is small and has a deficit in the number of nephrons present.","definition_xrefs":["Orphanet:97361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia","termid":"MONDO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypoplasia, unilateral","secondary_identifiers":["UMLS:C0431691","ICD10CM:Q60.3","GARD:19373","MEDGEN:609098"],"termid":"MONDO:0019979","xrefs":{"Monarch":{"xref_id":"0019979"}}}


id: GO:0100013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates fatty acid beta-oxidation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fatty acid beta-oxidation by transcription from RNA polymerase II promoter (obsolete GO:0100013)","termid":"GO:0100013"}


id: PBO:0066790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 89","termid":"PBO:0066790"}


id: GO:0044357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of rRNA molecules to degradation. Includes processes that both stabilize and destabilize rRNAs.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"regulation of rRNA catabolic process","termid":"GO:1902374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of rRNA stability","synonyms":[{"name":"regulation of ribosomal RNA stability","type":"exact"}],"termid":"GO:0044357"}


id: PBO:0070386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1","termid":"PBO:0070386"}


id: PBO:0084556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the SWI/SNF chromatin remodeling complex; has an as yet unidentified role in the complex; has identifiable counterparts in closely related yeast species; abundantly expressed in many growth conditions; paralog of Npl6p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0084556"}


id: PBO:0045826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 16","termid":"PBO:0045826"}


id: PBO:0076534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 60","termid":"PBO:0076534"}


id: FYPO:0001808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of adenine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal adenine import","termid":"FYPO:0001807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased adenine import","synonyms":[{"name":"decreased adenine import across plasma membrane","type":"exact"},{"name":"decreased adenine import during mitotic cell cycle","type":"related"},{"name":"decreased adenine import during vegetative growth","type":"exact"},{"name":"decreased adenine import into cell","type":"exact"},{"name":"decreased adenine uptake","type":"exact"},{"name":"reduced adenine import","type":"exact"}],"termid":"FYPO:0001808"}


id: PBO:0058954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKNK1 antisense RNA 1","termid":"PBO:0058954"}


id: GO:0016311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dephosphorylation","secondary_identifiers":["Wikipedia:Dephosphorylation"],"termid":"GO:0016311"}


id: PBO:0091659
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric Reductase in Pombe","termid":"PBO:0091659"}


id: PBO:0031658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth_during_cellular_hyperosmotic_response","termid":"PBO:0031658"}


id: MONDO:0000892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, invasive colon adenocarcinoma characterized by the presence of sheets of malignant epithelial cells with vesicular nuclei, prominent nucleoli, and abundant eosinophilic cytoplasm. It usually has a favorable prognosis.","definition_xrefs":["NCIT:C60641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"colorectal medullary carcinoma","termid":"MONDO:0020794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon medullary carcinoma","secondary_identifiers":["MEDGEN:363630","ONCOTREE:CMC","UMLS:C1880119","DOID:0080183"],"synonyms":[{"name":"colon medullary carcinoma","type":"exact"},{"name":"medullary carcinoma of the colon","type":"related"},{"name":"medullary colon carcinoma","type":"related"}],"termid":"MONDO:0000892","xrefs":{"Monarch":{"xref_id":"0000892"}}}


id: GO:0004693
data:
  {"annotated_genes":["SJAG_00150","SJAG_00342","SJAG_01825","SJAG_03048","SJAG_03967","SJAG_03421","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78107,81320,81433,81965,97755,104350,107661],"is_not":false,"summary":null,"term":"GO:0004693"}]},"cv_name":"molecular_function","definition":"Cyclin-dependent catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["PMID:9841670","GOC:rn","GOC:pr","PMID:7877684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase activity","termid":"GO:0097472"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01825":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016301","GO:0004672","GO:0016740"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2514854","Reactome:R-HSA-6793661","Reactome:R-HSA-69005","Reactome:R-HSA-188390","Reactome:R-HSA-1912391","Reactome:R-HSA-2990882","Reactome:R-HSA-9929904","Reactome:R-HSA-4086410","Reactome:R-HSA-5195402","Reactome:R-HSA-6805109","Reactome:R-HSA-9929721","Reactome:R-HSA-9929884","Reactome:R-HSA-4088024","Reactome:R-HSA-2294600","GO:0016537","Reactome:R-HSA-1226094","Reactome:R-HSA-187520","Reactome:R-HSA-2430533","EC:2.7.11.22","Reactome:R-HSA-187948","Reactome:R-HSA-9009282","Reactome:R-HSA-2468287","Reactome:R-HSA-5244669","Reactome:R-HSA-174079","Reactome:R-HSA-9929535","Reactome:R-HSA-187916","Reactome:R-HSA-1226095","Reactome:R-HSA-5692755","Reactome:R-HSA-187959","Reactome:R-HSA-2245218","Reactome:R-HSA-2468293","Reactome:R-HSA-9624800","Reactome:R-HSA-9929514","Reactome:R-HSA-9929532","Reactome:R-HSA-9929717","Reactome:R-HSA-2220971","Reactome:R-HSA-9929719","Reactome:R-HSA-69227","Reactome:R-HSA-68944","Reactome:R-HSA-174132","Reactome:R-HSA-174122","Reactome:R-HSA-180047","Reactome:R-HSA-3788705","Reactome:R-HSA-174251","Reactome:R-HSA-2172183","Reactome:R-HSA-6797606","Reactome:R-HSA-9008412","Reactome:R-HSA-9686521","Reactome:R-HSA-380278","Reactome:R-HSA-9929720","Reactome:R-HSA-2984220","Reactome:R-HSA-9929935"],"synonyms":[{"name":"ATP:cyclin phosphotransferase activity","type":"related"},{"name":"CDK","type":"related"},{"name":"CDK activity","type":"exact"},{"name":"CDK, catalytic subunit activity","type":"exact"},{"name":"Cdk-activating protein kinase activity","type":"related"},{"name":"D-type cyclin kinase activity","type":"narrow"},{"name":"cdc2 kinase activity","type":"narrow"},{"name":"cdk-activating kinase activity","type":"related"},{"name":"cyclin D-cdk6 kinase activity","type":"narrow"},{"name":"cyclin D-dependent kinase activity","type":"narrow"},{"name":"cyclin E kinase activity","type":"narrow"},{"name":"cyclin-A associated kinase activity","type":"narrow"},{"name":"cyclin-dependent kinase 6 activity","type":"narrow"},{"name":"cyclin-dependent kinase activity","type":"broad"},{"name":"cyclin-dependent kinase-2 activity","type":"narrow"},{"name":"cyclin-dependent kinase-4 activity","type":"narrow"},{"name":"cyclin-dependent protein kinase activity","type":"broad"},{"name":"cyclin-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"neuronal cdc2-like kinase activity","type":"narrow"}],"termid":"GO:0004693","terms_by_termid":{"GO:0004693":null}}


id: MONDO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A focal dystonia of the pelvic floor muscles during attempted defecation.","definition_xrefs":["Wikipedia:Anismus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"anismus","secondary_identifiers":["SCTID:83605009","ICD9:569.49","MEDGEN:540810","UMLS:C0267601","DOID:0050839"],"synonyms":[{"name":"anal region skeletal muscle focal dystonia","type":"exact"},{"name":"dyskinetic puborectalis","type":"related"},{"name":"dyssynergic defecation","type":"related"},{"name":"focal dystonia of anal region skeletal muscle","type":"exact"},{"name":"puborectalis syndrome","type":"related"},{"name":"rectosphincteric dyssynergia","type":"related"},{"name":"spastic pelvic floor syndrome","type":"related"},{"name":"sphincteric disobedience syndrome","type":"related"}],"termid":"MONDO:0000480","xrefs":{"Monarch":{"xref_id":"0000480"}}}


id: GO:0044618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. OBSOLETE. The process in which an organism effects a change in the relaxation of smooth muscle in the uterus of a second organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete obsolete modulation of relaxation of uterine smooth muscle in another organism (obsolete GO:0044618)","synonyms":[{"name":"modulation of relaxation of uterine smooth muscle in other organism","type":"exact"},{"name":"regulation of relaxation of uterine smooth muscle in other organism","type":"exact"}],"termid":"GO:0044618"}


id: MONDO:0020661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An undifferentiated soft tissue sarcoma characterized by the presence of uniform round or ovoid malignant cells with a high nuclear to cytoplasmic ratio.","definition_xrefs":["NCIT:C121799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated round cell sarcoma","secondary_identifiers":["UMLS:C4048304","MEDGEN:885673"],"synonyms":[{"name":"undifferentiated round cell sarcoma","type":"exact"}],"termid":"MONDO:0020661","xrefs":{"Monarch":{"xref_id":"0020661"}}}


id: PBO:0068014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 319","termid":"PBO:0068014"}


id: GO:0097326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a melanocyte to another cell via adhesion molecules.","definition_xrefs":["CL:0000148","GOC:uh","PMID:22637532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"melanocyte adhesion","termid":"GO:0097326"}


id: PBO:0064195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 3","termid":"PBO:0064195"}


id: MONDO:0011033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellituss that has material basis in mutation of the locus at chromosome 2q34.","definition_xrefs":["PMID:8650584","MONDO:patterns/inherited_susceptibility","DOID:0110752"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 13","secondary_identifiers":["MESH:C563352","OMIM:601318","MEDGEN:371337","UMLS:C1832474"],"synonyms":[{"name":"IDDM13","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 13","type":"related"},{"name":"insulin-dependent diabetes mellitus 13","type":"exact"}],"termid":"MONDO:0011033","xrefs":{"Monarch":{"xref_id":"0011033"}}}


id: PR:P33886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 2, skeletal/cardiac muscle that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase wis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.07c","secondary_identifiers":["UniProtKB:P33886"],"synonyms":[{"name":"SPBC409.07c","type":"related"},{"name":"Spom972h-MYLK2","type":"exact"},{"name":"protein kinase sty2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spc2","type":"related"},{"name":"sty2","type":"related"}],"termid":"PR:P33886"}


id: PBO:0076256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small vasohibin binding protein","termid":"PBO:0076256"}


id: PBO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE","termid":"PBO:0000345"}


id: MONDO:0002830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovary transitional cell carcinoma (obsolete MONDO:0002830)","termid":"MONDO:0002830","xrefs":{"Monarch":{"xref_id":"0002830"}}}


id: PBO:0081242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 10","termid":"PBO:0081242"}


id: PBO:0066099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS protein activator like 3","termid":"PBO:0066099"}


id: MONDO:0017172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 6","termid":"MONDO:0009661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002561","MONDO:0005328"],"is_obsolete":false,"name":"mucopolysaccharidosis type 6, slowly progressing","secondary_identifiers":["SCTID:67854007","UMLS:C5679780","GARD:21047","Orphanet:276223","MEDGEN:1842694"],"synonyms":[{"name":"MPS6, slowly progressing","type":"exact"},{"name":"MPSVI, slowly progressing","type":"exact"},{"name":"arylsulfatase B deficiency, slowly progressing","type":"exact"},{"name":"mucopolysaccharidosis type VI, slowly progressing","type":"exact"}],"termid":"MONDO:0017172","xrefs":{"Monarch":{"xref_id":"0017172"}}}


id: PBO:0090611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex subunit, peloto ortholog Dom34","termid":"PBO:0090611"}


id: PBO:0052207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 3","termid":"PBO:0052207"}


id: MONDO:0008154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteoma","termid":"MONDO:0005166"},{"relation_name":"is_a","term_name":"benign neoplasm of lower jaw bone","termid":"MONDO:0021522"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteomas of mandible","secondary_identifiers":["MEDGEN:318953","MESH:C563485","UMLS:C1833733","OMIM:166400"],"synonyms":[{"name":"osteomas of mandible","type":"exact"}],"termid":"MONDO:0008154","xrefs":{"Monarch":{"xref_id":"0008154"}}}


id: MONDO:0956976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is characterized by the pathophysiology phenotype combination (endotype) of non-atopic, smoking, obesity related, and elderly and that is characterized by neutrophilic (sputum neutrophils > 40–60%) or paucigranulocytic (i.e., normal sputum levels of both eosinophils and neutrophils) inflammation and a lack of response to corticosteroid therapy.","definition_xrefs":["DOID:0080818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T2-low asthma","termid":"MONDO:0956976","xrefs":{"Monarch":{"xref_id":"0956976"}}}


id: GO:0019084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The viral transcription that takes place after early transcription in the viral life cycle, and which involves the transcription of genes required for replication.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"middle viral transcription","synonyms":[{"name":"(delayed) early viral mRNA transcription","type":"related"}],"termid":"GO:0019084"}


id: GO:2000807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle clustering.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"synaptic vesicle clustering","termid":"GO:0097091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle clustering","termid":"GO:2000807"}


id: MOD:00794
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00477. Remap to MOD:00477.","definition_xrefs":["PubMed:9252331","Unimod:369"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00794 pyrrolidone from proline (obsolete MOD:00794)","synonyms":[{"name":"Pro->Pyrrolidone","type":"related"},{"name":"Pyrrolidone from Proline","type":"related"}],"termid":"MOD:00794"}


id: PBO:0038314
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_initial_curator_email","termid":"PBO:0038314"}


id: PBO:0043202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, M-type","termid":"PBO:0043202"}


id: GO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acylsphing-4-enine + H2O = a fatty acid + sphing-4-enine.","definition_xrefs":["RHEA:20856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase activity","secondary_identifiers":["Reactome:R-HSA-1606583","EC:3.5.1.23","Reactome:R-HSA-1606602","Reactome:R-HSA-428231","MetaCyc:CERAMIDASE-RXN","Reactome:R-HSA-428262","Reactome:R-HSA-428205"],"synonyms":[{"name":"acylsphingosine deacylase activity","type":"related"},{"name":"ceramidase activity","type":"narrow"},{"name":"glycosphingolipid ceramide deacylase","type":"broad"}],"termid":"GO:0017040"}


id: PBO:0049210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 2D","termid":"PBO:0049210"}


id: GO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"I band","termid":"GO:0031674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Z disc","synonyms":[{"name":"Z band","type":"exact"},{"name":"Z disk","type":"exact"},{"name":"Z line","type":"exact"}],"termid":"GO:0030018"}


id: GO:0043556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"part_of","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation in response to oxidative stress","termid":"GO:0043556"}


id: PBO:0062504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 5","termid":"PBO:0062504"}


id: PBO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Swi5 foci in rhp54 delta cells","termid":"PBO:0002176"}


id: GO:2000655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to testosterone stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to testosterone stimulus","termid":"GO:2000654"},{"relation_name":"negatively_regulates","term_name":"cellular response to testosterone stimulus","termid":"GO:0071394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to testosterone stimulus","termid":"GO:2000655"}


id: GO:0007543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the interactions between somatic cells and gonadal cells that ultimately results in the specification of sexual status of the organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"part_of","term_name":"primary sex determination, germ-line","termid":"GO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination, somatic-gonadal interaction","synonyms":[{"name":"sex determination, somatic/gonadal interaction","type":"exact"}],"termid":"GO:0007543"}


id: GO:0047926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (2S)-bornyl diphosphate.","definition_xrefs":["PMID:42357","RHEA:18209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"geranyl-diphosphate cyclase activity","secondary_identifiers":["KEGG_REACTION:R02007","EC:5.5.1.8","MetaCyc:GERANYL-DIPHOSPHATE-CYCLASE-RXN"],"synonyms":[{"name":"(+)-bornyl-diphosphate lyase (decyclizing)","type":"related"},{"name":"(+)-bornylpyrophosphate cyclase activity","type":"related"},{"name":"bornyl diphosphate synthase activity","type":"related"},{"name":"bornyl pyrophosphate synthase activity","type":"related"},{"name":"bornyl pyrophosphate synthetase activity","type":"related"}],"termid":"GO:0047926"}


id: MONDO:0030339
data:
  {"annotated_genes":["SJAG_03617"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88273],"is_not":false,"summary":null,"term":"MONDO:0030339"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03617":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 28, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619453","MEDGEN:1794279","DOID:0051039","UMLS:C5562069"],"synonyms":[{"name":"MCPH28","type":"exact"},{"name":"microcephaly 28, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0030339","terms_by_termid":{"MONDO:0030339":null},"xrefs":{"Monarch":{"xref_id":"0030339"}}}


id: MONDO:0958206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 89","secondary_identifiers":["UMLS:C5882752","OMIM:620705","DOID:0070588","MEDGEN:1852501"],"termid":"MONDO:0958206","xrefs":{"Monarch":{"xref_id":"0958206"}}}


id: PBO:0110362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC9 pseudogene 1","termid":"PBO:0110362"}


id: PBO:0001045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein Srb mediator subunit kinase Srb10","termid":"PBO:0001045"}


id: GO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-3-O-(beta-D-galactosyl)-sn-glycerol + 2 H2O = 3-beta-D-galactosyl-sn-glycerol + 2 a fatty acid + 2 H+.","definition_xrefs":["RHEA:13189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactolipase activity","secondary_identifiers":["EC:3.1.1.26","MetaCyc:GALACTOLIPASE-RXN"],"synonyms":[{"name":"1,2-diacyl-3-beta-D-galactosyl-sn-glycerol acylhydrolase activity","type":"related"},{"name":"galactolipid acylhydrolase activity","type":"related"},{"name":"galactolipid lipase activity","type":"related"},{"name":"polygalactolipase activity","type":"related"}],"termid":"GO:0047714"}


id: FYPO:0000398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition","synonyms":[{"name":"advanced mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"cell cycle progression through the G1/S phase transition: premature","type":"related"},{"name":"premature G1/S phase transition during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"premature mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"premature mitotic G1/S transition","type":"exact"}],"termid":"FYPO:0000398"}


id: PBO:0030863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortex","termid":"PBO:0030863"}


id: GO:0097623
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114340],"is_not":false,"summary":null,"term":"GO:0097623"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:vw","PMID:11932440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"potassium ion export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098668","GO:0071435"],"synonyms":[{"name":"potassium export","type":"broad"},{"name":"potassium export across plasma membrane","type":"exact"},{"name":"potassium ion export","type":"broad"},{"name":"potassium ion export from cell","type":"exact"}],"termid":"GO:0097623","terms_by_termid":{"GO:0097623":null}}


id: PBO:0028241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_at_mitotic_G1/S_phase_transition","termid":"PBO:0028241"}


id: GO:1905793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a pericentriolar material.","definition_xrefs":["GO_REF:0000087","PMID:24385583","GOC:TermGenie","PMID:21694707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to pericentriolar material","synonyms":[{"name":"protein localisation in pericentriolar material","type":"exact"},{"name":"protein localisation to pericentriolar material","type":"exact"},{"name":"protein localization in pericentriolar material","type":"exact"}],"termid":"GO:1905793"}


id: MONDO:0015793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiminicore myopathy","termid":"MONDO:0018948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderate multiminicore disease with hand involvement","secondary_identifiers":["GARD:17078","MEDGEN:396213","UMLS:C1861753","Orphanet:178145"],"termid":"MONDO:0015793","xrefs":{"Monarch":{"xref_id":"0015793"}}}


id: PBO:0111815
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein","termid":"PBO:0111815"}


id: GO:0033634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion mediated by integrin","termid":"GO:0033630"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by integrin","termid":"GO:0033632"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033634"}


id: GO:1902489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a hepatoblast.","definition_xrefs":["GOC:TermGenie","PMID:22412967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatoblast apoptotic process","synonyms":[{"name":"hepatoblast apoptosis","type":"narrow"}],"termid":"GO:1902489"}


id: PBO:0090840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12-like","termid":"PBO:0090840"}


id: MONDO:0002639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the glossopharyngeal nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glossopharyngeal nerve disorder","secondary_identifiers":["ICD9:352","ICD9:352.2","NCIT:C27211","DOID:3418","SCTID:80962007","UMLS:C0751941","MEDGEN:199771"],"synonyms":[{"name":"IX nerve disorder","type":"exact"},{"name":"disease of glossopharyngeal nerve","type":"exact"},{"name":"disease or disorder of glossopharyngeal nerve","type":"exact"},{"name":"disorder of glossopharyngeal nerve","type":"exact"},{"name":"glossopharyngeal nerve disease","type":"exact"},{"name":"glossopharyngeal nerve disease or disorder","type":"exact"},{"name":"glossopharyngeal nerve disorder","type":"exact"},{"name":"ninth nerve disorder","type":"exact"}],"termid":"MONDO:0002639","xrefs":{"Monarch":{"xref_id":"0002639"}}}


id: PBO:0077469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 190","termid":"PBO:0077469"}


id: FYPO:0001249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin is higher than in wild type. In cells with increased origin firing efficiency, genomic DNA replication initiates from more origins than wild type, and is completed in more, smaller segments, than wild type.","definition_xrefs":["PMID:18799612","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"increased origin firing efficiency","synonyms":[{"name":"increased origin firing efficiency during mitotic cell cycle","type":"related"},{"name":"increased origin firing efficiency during vegetative growth","type":"exact"}],"termid":"FYPO:0001249"}


id: MOD:01335
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:464#K","PubMed:11467524","PubMed:16526082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00880"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized lysine","synonyms":[{"name":"4-sulfophenyl isothiocyanate (Heavy C13)","type":"related"},{"name":"SPITC:13C(6)","type":"related"}],"termid":"MOD:01335"}


id: MONDO:0014547
data:
  {"annotated_genes":["SJAG_04856"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87333],"is_not":false,"summary":null,"term":"MONDO:0014547"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the NARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 24","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:444458","UMLS:C4015643","OMIM:616239","MEDGEN:864080","GARD:17765","DOID:0111485"],"synonyms":[{"name":"COXPD24","type":"exact"},{"name":"NARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 24","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in NARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 24","type":"exact"}],"termid":"MONDO:0014547","terms_by_termid":{"MONDO:0014547":null},"xrefs":{"Monarch":{"xref_id":"0014547"}}}


id: PBO:0030248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cold","termid":"PBO:0030248"}


id: PBO:0087532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Nucleotide Excision Repair Factor 1 (NEF1); recognizes and binds damaged DNA during nucleotide excision repair (NER); also involved in regulation of transcription; contains zinc finger motif; homolog of human XPA protein","termid":"PBO:0087532"}


id: GO:0042297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral process whose outcome is a relatively long-lasting behavioral change whereby an organism modifies innate vocalizations to imitate sounds produced by others.","definition_xrefs":["GOC:dos","GOC:BHF","PMID:17035521","GOC:rl","PMID:16418265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory behavior","termid":"GO:0031223"},{"relation_name":"is_a","term_name":"imitative learning","termid":"GO:0098596"},{"relation_name":"is_a","term_name":"learned vocalization behavior or vocal learning","termid":"GO:0098598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vocal learning","secondary_identifiers":["Wikipedia:Vocal_learning"],"termid":"GO:0042297"}


id: PBO:0047876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(4)(p16.1)","termid":"PBO:0047876"}


id: MONDO:0010271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked myotubular myopathy-abnormal genitalia syndrome is a rare chromosomal anomaly, partial deletion of the long arm of chromosome X, characterized by a combination of clinical manifestations of X-linked myotubular myopathy and a 46,XY disorder of sex development. Patients present with severe form of congenital myopathy and abnormal male genitalia.","definition_xrefs":["Orphanet:456328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"X-linked myotubular myopathy","termid":"MONDO:0010683"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome X","termid":"MONDO:0017007"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"X-linked myotubular myopathy-abnormal genitalia syndrome","secondary_identifiers":["MESH:C564561","OMIM:300219","GARD:17792","UMLS:C1846169","MEDGEN:335354"],"synonyms":[{"name":"Xq28 contiguous gene deletion syndrome","type":"exact"},{"name":"myotubular myopathy with abnormal genital development","type":"related"}],"termid":"MONDO:0010271","xrefs":{"Monarch":{"xref_id":"0010271"}}}


id: PBO:0061508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRXN2 antisense RNA 1","termid":"PBO:0061508"}


id: FYPO:0006377
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"abnormal protein localisation to endoplasmic reticulum","type":"exact"},{"name":"abnormal protein localization to ER","type":"exact"}],"termid":"FYPO:0006377","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF962 family protein","termid":"PBO:0002082"}


id: PBO:0040332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 7","termid":"PBO:0040332"}


id: GO:0030647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoglycoside antibiotic metabolic process (obsolete GO:0030647)","synonyms":[{"name":"aminoglycoside antibiotic metabolism","type":"exact"}],"termid":"GO:0030647"}


id: PBO:0083156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF YIL067C","termid":"PBO:0083156"}


id: MONDO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the anus","direct_ancestors":[{"relation_name":"is_a","term_name":"anus neoplasm","termid":"MONDO:0003046"},{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anus cancer","secondary_identifiers":["ICD9:154.2","SCTID:363352004","DOID:14110","NCIT:C7379","MEDGEN:56303","ICD9:154.3","UMLS:C0153446"],"synonyms":[{"name":"anus cancer","type":"exact"},{"name":"cancer of anus","type":"exact"},{"name":"malignant anal neoplasm","type":"exact"},{"name":"malignant anal tumor","type":"exact"},{"name":"malignant anal tumour","type":"exact"},{"name":"malignant anus neoplasm","type":"exact"},{"name":"malignant neoplasm of anus","type":"exact"},{"name":"malignant neoplasm of the anus","type":"exact"},{"name":"malignant tumor of anus","type":"exact"},{"name":"malignant tumor of the anus","type":"exact"},{"name":"malignant tumour of anus","type":"exact"},{"name":"malignant tumour of the anus","type":"exact"}],"termid":"MONDO:0001879","xrefs":{"Monarch":{"xref_id":"0001879"}}}


id: MONDO:0008572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibial hemimelia-polysyndactyly-triphalangeal thumb syndrome is a rare, genetic dysostosis syndrome, with marked inter- and intra-familial variation, typically characterized by triphalangeal thumbs, hand and/or foot polysyndactyly and/or absent/hypoplastic tibiae (associated with duplication of fibulae in some cases), although isolated triphalangeal thumbs have also been reported. It is often accompanied with remarkable short stature and additional features may include radio-ulnar synostosis and hand oligodactyly, as well as abnormal carpal and metatarsal bones.","definition_xrefs":["Orphanet:988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibia, hypoplasia or aplasia of, with polydactyly","secondary_identifiers":["GARD:8309","DOID:0111564","MEDGEN:348786","MESH:C535564","OMIM:188740","SCTID:716741008","UMLS:C1861098","MESH:C566046","Orphanet:3332"],"synonyms":[{"name":"THYP","type":"related"},{"name":"Werner mesomelic syndrome","type":"exact"},{"name":"absence of tibia with polydactyly","type":"related"},{"name":"absent tibia-polydactyly syndrome","type":"exact"},{"name":"hypoplastic or aplastic tibia with polydactyly","type":"exact"},{"name":"hypoplastic tibiae-postaxial polydactyly syndrome","type":"exact"},{"name":"polydactyly with absent tibia","type":"related"},{"name":"tibia, hypoplasia or aplasia of, with polydactyly","type":"exact"},{"name":"tibial hemimelia-polydactyly-triphalangeal thumbs with fibular dimelia","type":"related"},{"name":"tibial hemimelia-polysyndactyly-triphalangeal thumb syndrome","type":"related"}],"termid":"MONDO:0008572","xrefs":{"Monarch":{"xref_id":"0008572"}}}


id: PBO:0091340
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulated by Different Signals","termid":"PBO:0091340"}


id: PBO:0005126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein, BIG1 family (predicted)","termid":"PBO:0005126"}


id: PBO:0109361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 1","termid":"PBO:0109361"}


id: GO:0022030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of glial cells through the telencephalon.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon glial cell migration","termid":"GO:0022030"}


id: MONDO:0018238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare bone disease related to a common gene or pathway defect (obsolete MONDO:0018238)","termid":"MONDO:0018238","xrefs":{"Monarch":{"xref_id":"0018238"}}}


id: PBO:0077002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 4","termid":"PBO:0077002"}


id: GO:0140632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inflammasome complex.","definition_xrefs":["PMID:33542150","PMID:33420033","PMID:33420028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"canonical inflammasome complex assembly","termid":"GO:0140632"}


id: MONDO:0019185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rhabdomyosarcoma (obsolete MONDO:0019185)","synonyms":[{"name":"obsolete rhabdomyosarcoma (disease)","type":"exact"}],"termid":"MONDO:0019185","xrefs":{"Monarch":{"xref_id":"0019185"}}}


id: PBO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.-","termid":"PBO:0000508"}


id: PBO:0057376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ar","termid":"PBO:0057376"}


id: PR:O13978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg101 gene.","definition_xrefs":["UniProtKB:O13978","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 66 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.03","synonyms":[{"name":"Spom972h-atg101","type":"exact"},{"name":"autophagy-related protein 101 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13978"}


id: FYPO:0008284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of myo-inositol in a cell is normal when the cell is in the vegetative growth phase of the life cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular myo-inositol level","termid":"FYPO:0008284"}


id: PBO:0085422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane t-SNARE; involved in fusion of secretory vesicles at the plasma membrane and in vesicle fusion during sporulation; forms a complex with Sec9p that binds v-SNARE Snc2p; syntaxin homolog; functionally redundant with Sso2p; SSO1 has a paralog, SSO2, that arose from the whole genome duplication","termid":"PBO:0085422"}


id: GO:0043154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of a cysteine-type endopeptidase activity involved in the apoptotic process.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (obsolete GO:0043154)","secondary_identifiers":["Reactome:R-HSA-5218900"],"synonyms":[{"name":"down regulation of caspase activity","type":"exact"},{"name":"down-regulation of caspase activity","type":"exact"},{"name":"downregulation of caspase activity","type":"exact"},{"name":"inhibition of caspase activation","type":"narrow"},{"name":"inhibition of caspase activity","type":"narrow"},{"name":"negative regulation of caspase activation","type":"exact"},{"name":"negative regulation of caspase activity","type":"broad"}],"termid":"GO:0043154"}


id: PBO:0083965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID Complex regulatory subunit; binds GID Complex in response to glucose through interactions with complex member Vid28p; regulates fructose-1,6-bisphosphatase (FBPase) targeting to the vacuole; promotes proteasome-dependent catabolite degradation of FBPase; peripheral membrane protein located at Vid (vacuole import and degradation) vesicles","termid":"PBO:0083965"}


id: MONDO:0001261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of intermittent failure of atrial electrical impulse conduction to the ventricles, characterized by a relatively constant PR interval prior to the block of an atrial impulse. (CDISC)","definition_xrefs":["NCIT:C62018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"second-degree atrioventricular block","termid":"MONDO:0000467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Mobitz type II atrioventricular block","secondary_identifiers":["NANDO:2200213","ICD9:426.12","MEDGEN:102340","DOID:11312","SCTID:28189009","NANDO:2100044","UMLS:C0155700"],"synonyms":[{"name":"AV block second degree Mobitz type II","type":"exact"},{"name":"AV block second degree Möbitz type II","type":"exact"},{"name":"Mobitz (type) II atrioventricular block","type":"exact"},{"name":"Mobitz II","type":"exact"},{"name":"Mobitz II atrioventricular block","type":"exact"},{"name":"Mobitz type II second degree AV block","type":"exact"},{"name":"Möbitz II","type":"exact"},{"name":"Möbitz type II second degree AV block","type":"exact"},{"name":"second degree atrioventricular block Mobitz type II","type":"exact"},{"name":"second degree atrioventricular block Möbitz type II","type":"exact"},{"name":"type 2 2nd degree AV block","type":"exact"},{"name":"type 2 second degree AV block","type":"exact"},{"name":"type II second degree AV block","type":"exact"},{"name":"type II second degree atrioventricular block","type":"exact"}],"termid":"MONDO:0001261","xrefs":{"Monarch":{"xref_id":"0001261"}}}


id: MONDO:0044788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intrahepatic cholangiocarcinoma that arises from the intrahepatic large bile ducts.","definition_xrefs":["NCIT:C96804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrahepatic cholangiocarcinoma","termid":"MONDO:0003210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"perihilar intrahepatic cholangiocarcinoma","secondary_identifiers":["ONCOTREE:PHCH"],"synonyms":[{"name":"perihilar ICC","type":"exact"},{"name":"perihilar bile duct carcinoma","type":"exact"},{"name":"perihilar cholangiocarcinoma","type":"related"},{"name":"perihilar intrahepatic cholangiocarcinoma","type":"exact"}],"termid":"MONDO:0044788","xrefs":{"Monarch":{"xref_id":"0044788"}}}


id: PBO:0086369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aminopeptidase; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to the vacuole","termid":"PBO:0086369"}


id: PBO:0067648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 823, pseudogene","termid":"PBO:0067648"}


id: GO:1900789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pseurotin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam catabolic process","termid":"GO:0072340"},{"relation_name":"is_a","term_name":"pseurotin A metabolic process","termid":"GO:1900788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pseurotin A catabolic process","synonyms":[{"name":"Pseurotin breakdown","type":"related"},{"name":"Pseurotin catabolic process","type":"related"},{"name":"Pseurotin catabolism","type":"related"},{"name":"Pseurotin degradation","type":"related"},{"name":"pseurotin A breakdown","type":"exact"},{"name":"pseurotin A catabolism","type":"exact"},{"name":"pseurotin A degradation","type":"exact"}],"termid":"GO:1900789"}


id: PBO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin deacetylase Cda1","termid":"PBO:0002332"}


id: FYPO:0007885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of Lms2-8 complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:33378677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"decreased Lsm2-8 complex binding","synonyms":[{"name":"reduced Lsm2-8 complex binding","type":"exact"}],"termid":"FYPO:0007885"}


id: PBO:0041440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C9orf72-SMCR8 complex subunit","termid":"PBO:0041440"}


id: PBO:0048257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylceramidase","termid":"PBO:0048257"}


id: PBO:0068644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 25, pseudogene","termid":"PBO:0068644"}


id: PBO:0001541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial genome maintenance protein Rrg9 (predicted)","termid":"PBO:0001541"}


id: PBO:0055031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2446","termid":"PBO:0055031"}


id: MONDO:0015797
data:
  {"annotated_genes":["SJAG_04540","SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010909"},{"annotations":[88208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013829"}]},"cv_name":"mondo","definition":"UV-sensitive syndrome is a condition that is characterized by sensitivity to the ultraviolet (UV) rays in sunlight. Even a small amount of sun exposure can cause a sunburn in affected individuals. In addition, these individuals can have freckles, dryness, or changes in coloring (pigmentation) on sun-exposed areas of skin after repeated exposure. Some people with UV-sensitive syndrome have small clusters of enlarged blood vessels just under the skin (telangiectasia), usually on the cheeks and nose. Although UV exposure can cause skin cancers, people with UV-sensitive syndrome do not have an increased risk of developing these forms of cancer compared with the general population.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04114":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0021190","MONDO:0006025"],"is_obsolete":false,"name":"UV-sensitive syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10947","Orphanet:178338","SCTID:698253007","ICD9:702.8","MEDGEN:322222","MESH:C563466","UMLS:C1833561","OMIMPS:600630","DOID:0060240"],"synonyms":[{"name":"UV sensitive syndrome","type":"related"},{"name":"UVSS","type":"related"}],"termid":"MONDO:0015797","terms_by_termid":{"MONDO:0010909":null,"MONDO:0013829":null},"xrefs":{"Monarch":{"xref_id":"0015797"}}}


id: FYPO:0002502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein palmitoylation is normal (i.e. indistinguishable from wild type). Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["GO:0018345","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"},{"relation_name":"is_a","term_name":"normal protein palmitoylation","termid":"FYPO:0002500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein palmitoylation during vegetative growth","synonyms":[{"name":"normal protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide palmitoylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002502"}


id: GO:1904964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phytol biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24275650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"is_a","term_name":"regulation of phytol biosynthetic process","termid":"GO:1904963"},{"relation_name":"positively_regulates","term_name":"phytol biosynthetic process","termid":"GO:0033520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"positive regulation of phytol biosynthetic process","synonyms":[{"name":"activation of phytol anabolism","type":"narrow"},{"name":"activation of phytol biosynthesis","type":"narrow"},{"name":"activation of phytol biosynthetic process","type":"narrow"},{"name":"activation of phytol formation","type":"narrow"},{"name":"activation of phytol synthesis","type":"narrow"},{"name":"positive regulation of phytol anabolism","type":"exact"},{"name":"positive regulation of phytol biosynthesis","type":"exact"},{"name":"positive regulation of phytol formation","type":"exact"},{"name":"positive regulation of phytol synthesis","type":"exact"},{"name":"up regulation of phytol anabolism","type":"exact"},{"name":"up regulation of phytol biosynthesis","type":"exact"},{"name":"up regulation of phytol biosynthetic process","type":"exact"},{"name":"up regulation of phytol formation","type":"exact"},{"name":"up regulation of phytol synthesis","type":"exact"},{"name":"up-regulation of phytol anabolism","type":"exact"},{"name":"up-regulation of phytol biosynthesis","type":"exact"},{"name":"up-regulation of phytol biosynthetic process","type":"exact"},{"name":"up-regulation of phytol formation","type":"exact"},{"name":"up-regulation of phytol synthesis","type":"exact"},{"name":"upregulation of phytol anabolism","type":"exact"},{"name":"upregulation of phytol biosynthesis","type":"exact"},{"name":"upregulation of phytol biosynthetic process","type":"exact"},{"name":"upregulation of phytol formation","type":"exact"},{"name":"upregulation of phytol synthesis","type":"exact"}],"termid":"GO:1904964"}


id: FYPO:0005490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to vacuole","synonyms":[{"name":"abnormal protein localisation to vacuole","type":"exact"},{"name":"abnormal protein localization in vacuole","type":"exact"},{"name":"abnormal protein localization to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0005490"}


id: MONDO:0021316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the minor salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland cancer","termid":"MONDO:0004669"},{"relation_name":"is_a","term_name":"vestibule of mouth cancer","termid":"MONDO:0004727"},{"relation_name":"is_a","term_name":"neoplasm of minor salivary gland","termid":"MONDO:0021370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"malignant tumor of minor salivary gland","secondary_identifiers":["MEDGEN:91049","SCTID:363485006","UMLS:C0345614","NCIT:C4410"],"synonyms":[{"name":"cancer of minor salivary gland","type":"exact"},{"name":"malignant minor salivary gland neoplasm","type":"exact"},{"name":"malignant minor salivary gland tumor","type":"exact"},{"name":"malignant minor salivary gland tumour","type":"exact"},{"name":"malignant neoplasm of minor salivary gland","type":"exact"},{"name":"malignant neoplasm of the minor salivary gland","type":"exact"},{"name":"malignant tumor of the minor salivary gland","type":"exact"},{"name":"malignant tumour of the minor salivary gland","type":"exact"},{"name":"minor salivary gland cancer","type":"related"}],"termid":"MONDO:0021316","xrefs":{"Monarch":{"xref_id":"0021316"}}}


id: GO:0075343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of abscisic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of abscisic acid levels in host (obsolete GO:0075343)","termid":"GO:0075343"}


id: GO:0008997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction, leaving an undigested core of 3-5 nucleotides.","definition_xrefs":["PMID:11948193"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonuclease R activity (obsolete GO:0008997)","termid":"GO:0008997"}


id: PBO:0041013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bactericidal permeability increasing protein","termid":"PBO:0041013"}


id: PBO:0003364
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial dysautonomia","termid":"PBO:0003364"}


id: FYPO:0007974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic anaphase B in which interpolar microtubule polymerization occurs at a higher rate, or speed, than normal for microtubules with their plus ends inside the nuclear membrane bridge formed during mitotic anaphase B.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of interpolar microtubule polymerization during mitotic anaphase B","termid":"FYPO:0007971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of interpolar microtubule polymerization inside the mitotic nuclear membrane bridge","termid":"FYPO:0007974"}


id: PBO:0066685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting pseudogene 3","termid":"PBO:0066685"}


id: MONDO:0032854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Zimmermann-Laband syndrome in which the cause of the disease is a mutation in the KCNN3 gene. It is characterized by developmental delay, intellectual disability, coarse face, gingival hyperplasia, and nail hypoplasia/aplasia","definition_xrefs":["OMIM:618658","PMID:31155282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zimmermann-Laband syndrome","termid":"MONDO:0000200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zimmermann-Laband syndrome 3","secondary_identifiers":["GARD:16371","UMLS:C5231447","MEDGEN:1684740"],"synonyms":[{"name":"ZIMMERMANN-LABAND SYNDROME 3","type":"exact"},{"name":"ZLS3","type":"exact"}],"termid":"MONDO:0032854","xrefs":{"Monarch":{"xref_id":"0032854"}}}


id: MONDO:1011142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, horse","secondary_identifiers":["OMIA:001764-9796"],"termid":"MONDO:1011142","xrefs":{"Monarch":{"xref_id":"1011142"}}}


id: PBO:0064386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 8","termid":"PBO:0064386"}


id: PBO:0046427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B2","termid":"PBO:0046427"}


id: GO:0048885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a migrating neuromast primordium deposits clusters of undifferentiated cells (proneuromasts) along its migratory path in a developing lateral line.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast deposition","termid":"GO:0048885"}


id: GO:1900828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving D-tyrosine.","definition_xrefs":["GOC:TermGenie","PMID:10766779"],"gene_count":0,"genotype_count":0,"name":"obsolete D-tyrosine metabolic process (obsolete GO:1900828)","synonyms":[{"name":"D-tyrosine metabolism","type":"exact"}],"termid":"GO:1900828"}


id: GO:0007032
data:
  {"annotated_genes":["SJAG_03005","SJAG_01772","SJAG_04966","SJAG_02100","SJAG_01571","SJAG_01448"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77010,78404,81684,81943,104616],"is_not":false,"summary":null,"term":"GO:0007032"},{"annotations":[76232],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034496"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of endosomes.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_01571":null,"SJAG_01772":null,"SJAG_02100":null,"SJAG_03005":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endosome organisation","type":"exact"},{"name":"endosome organization and biogenesis","type":"related"}],"termid":"GO:0007032","terms_by_termid":{"GO:0007032":null,"GO:0034496":null}}


id: GO:0140980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleosides within a cell.","definition_xrefs":["PMID:23416111","PMID:34880500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleoside homeostasis","termid":"GO:0140980"}


id: PBO:0053150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 7","termid":"PBO:0053150"}


id: MONDO:0005086
data:
  {"annotated_genes":["SJAG_02231","SJAG_03677","SJAG_03787","SJAG_01144","SJAG_00440"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[88078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88705,88706,88704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the kidney","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"renal carcinoma","termid":"MONDO:0005206"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_01144":null,"SJAG_02231":null,"SJAG_03677":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:766","MESH:D002292","ONCOTREE:RCC","SCTID:702391001","EFO:0000681","ICD9:189.0","NORD:1657","MedDRA:10067946","GARD:13215","NANDO:2200045","NCIT:C9385","HP:0005584","UMLS:C0007134","DOID:4450","Orphanet:217071"],"synonyms":[{"name":"RCC","type":"exact"},{"name":"hypernephroma","type":"exact"},{"name":"kidney adenocarcinoma","type":"related"},{"name":"renal cell adenocarcinoma","type":"related"},{"name":"renal cell carcinoma","type":"exact"},{"name":"renal cell carcinoma (disease)","type":"exact"}],"termid":"MONDO:0005086","terms_by_termid":{"MONDO:0003789":null,"MONDO:0007763":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0005086"}}}


id: GO:0051782
data:
  {"annotated_genes":["SJAG_00526","SJAG_00229","SJAG_02392","SJAG_03048","SJAG_00883","SJAG_03508","SJAG_02514","SJAG_03681","SJAG_04943","SJAG_04455","SJAG_02169","SJAG_03592","SJAG_02838","SJAG_01790","SJAG_01464","SJAG_02795","SJAG_01386","SJAG_03353","SJAG_00845","SJAG_01787","SJAG_02592","SJAG_04551","SJAG_06270"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[97802,92714,104321,96317,105648,112755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[105649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[94790,104099,101620,109069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[104326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[94791,95404,97588,112154,74796,107008,109070,109513,103231,109203,92672,93684,94876,101542,117902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"negatively_regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02514":null,"SJAG_02592":null,"SJAG_02795":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04551":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell division","type":"exact"},{"name":"down-regulation of cell division","type":"exact"},{"name":"downregulation of cell division","type":"exact"},{"name":"inhibition of cell division","type":"narrow"}],"termid":"GO:0051782","terms_by_termid":{"GO:0031030":null,"GO:1902413":null,"GO:1903472":null,"GO:1903500":null,"GO:1905757":null,"GO:2000432":null}}


id: MONDO:0016459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The newly described 2q23.1 microdeletion syndrome includes severe intellectual deficit with pronounced speech delay, behavioral abnormalities including hyperactivity and inappropriate laughter, short stature and seizures.","definition_xrefs":["Orphanet:228402"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2q23.1 microdeletion syndrome","secondary_identifiers":["GARD:10998","SCTID:719657001","UMLS:C4304532","MEDGEN:930201"],"synonyms":[{"name":"Del(2)(q23.1)","type":"exact"},{"name":"chromosome 2q23.1 microdeletion syndrome","type":"related"},{"name":"monosomy 2q23.1","type":"exact"},{"name":"pseudo-Angelman syndrome","type":"exact"}],"termid":"MONDO:0016459","xrefs":{"Monarch":{"xref_id":"0016459"}}}


id: GO:1901097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of autophagosome maturation.","definition_xrefs":["PMID:10436019","PMID:21383079","GOC:autophagy","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"regulation of autophagosome maturation","termid":"GO:1901096"},{"relation_name":"negatively_regulates","term_name":"autophagosome maturation","termid":"GO:0097352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"negative regulation of autophagosome maturation","secondary_identifiers":["GO:1902453"],"synonyms":[{"name":"down regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"down regulation of autolysosome formation","type":"narrow"},{"name":"down regulation of autophagic vacuole fusion","type":"exact"},{"name":"down regulation of autophagic vacuole maturation","type":"exact"},{"name":"down regulation of autophagosome maturation","type":"exact"},{"name":"down regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"down-regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"down-regulation of autolysosome formation","type":"narrow"},{"name":"down-regulation of autophagic vacuole fusion","type":"exact"},{"name":"down-regulation of autophagic vacuole maturation","type":"exact"},{"name":"down-regulation of autophagosome maturation","type":"exact"},{"name":"down-regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"downregulation of amphisome-lysosome fusion","type":"narrow"},{"name":"downregulation of autolysosome formation","type":"narrow"},{"name":"downregulation of autophagic vacuole fusion","type":"exact"},{"name":"downregulation of autophagic vacuole maturation","type":"exact"},{"name":"downregulation of autophagosome maturation","type":"exact"},{"name":"downregulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"inhibition of amphisome-lysosome fusion","type":"narrow"},{"name":"inhibition of autolysosome formation","type":"narrow"},{"name":"inhibition of autophagic vacuole fusion","type":"narrow"},{"name":"inhibition of autophagic vacuole maturation","type":"narrow"},{"name":"inhibition of autophagosome maturation","type":"exact"},{"name":"inhibition of fusion of autophagosome with lysosome","type":"narrow"},{"name":"negative regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"negative regulation of autolysosome formation","type":"narrow"},{"name":"negative regulation of autophagic vacuole fusion","type":"exact"},{"name":"negative regulation of autophagosome fusion","type":"exact"},{"name":"negative regulation of fusion of autophagosome with lysosome","type":"narrow"}],"termid":"GO:1901097"}


id: GO:0031103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons following their loss or damage.","definition_xrefs":["GOC:dgh","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection regeneration","termid":"GO:0031102"},{"relation_name":"is_a","term_name":"response to axon injury","termid":"GO:0048678"},{"relation_name":"is_a","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon regeneration","termid":"GO:0031103"}


id: MONDO:0975805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"foveal hypoplasia","termid":"MONDO:0044203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foveal hypoplasia 3","secondary_identifiers":["OMIM:620958"],"termid":"MONDO:0975805","xrefs":{"Monarch":{"xref_id":"0975805"}}}


id: SO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL6 RNA leader sequence to the 5' end of an mRNA. SL6 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL6_acceptor_site","synonyms":[{"name":"SL6 acceptor site","type":"exact"}],"termid":"SO:0001751"}


id: PBO:0068586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 37, pseudogene","termid":"PBO:0068586"}


id: MONDO:0971058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bacterial infectious disease characterized by development of endothelial cell-derived, blood-filled tumors on the surface of the skin during the chronic phase of infection with Bartonella bacilliformis. The lesions can persist for months to years and may cause pain and scarring due to ulceration. They are classified as miliary (multiple red papules of <3 mm in diameter), mular (blood-filled nodules), and diffuse (groups of subdermal nodules >5 mm in diameter). Eruptions may be accompanied by fever and malaise, lymphadenopathy, acute bone and joint pains, and headache. Fatality rates during this phase are low.","definition_xrefs":["Orphanet:659759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Oroya fever","termid":"MONDO:0018984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verruga peruana","secondary_identifiers":["UMLS:C0042552","icd11.foundation:1480386521","MEDGEN:21848"],"termid":"MONDO:0971058","xrefs":{"Monarch":{"xref_id":"0971058"}}}


id: PBO:0066028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 17","termid":"PBO:0066028"}


id: PBO:0079436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 4","termid":"PBO:0079436"}


id: GO:0140623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a type I pilus.","definition_xrefs":["PMID:1679330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus assembly","termid":"GO:0009297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"type I pilus assembly","synonyms":[{"name":"T1P assembly","type":"broad"},{"name":"type 1 pilus biogenesis","type":"exact"},{"name":"type I fimbria assembly","type":"exact"},{"name":"type I fimbria biogenesis","type":"exact"},{"name":"type I fimbriae assembly","type":"exact"},{"name":"type I fimbriae biogenesis","type":"exact"},{"name":"type I fimbrial assembly","type":"exact"},{"name":"type I fimbrial biogenesis","type":"exact"},{"name":"type I fimbrium assembly","type":"exact"},{"name":"type I fimbrium biogenesis","type":"exact"}],"termid":"GO:0140623"}


id: PBO:0080376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS8 subunit of CORVET complex","termid":"PBO:0080376"}


id: GO:0039616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=2 symmetry. The T=2 capsid is composed of 12 pentameric dimers.","definition_xrefs":["VZ:838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=2 icosahedral viral capsid","termid":"GO:0039616"}


id: PBO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_vegetative_cell","termid":"PBO:0030785"}


id: PBO:0045612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 23 (pseudogene)","termid":"PBO:0045612"}


id: PBO:0056220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member C3","termid":"PBO:0056220"}


id: GO:1903774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral budding via host ESCRT complex.","definition_xrefs":["GOC:TermGenie","GOC:als","GO_REF:0000058","PMID:24878737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral budding via host ESCRT complex","termid":"GO:1903772"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"viral budding via host ESCRT complex","termid":"GO:0039702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral budding via host ESCRT complex","synonyms":[{"name":"activation of viral budding through the ESCRT machinery","type":"related"},{"name":"activation of viral budding via host ESCRT complex","type":"narrow"},{"name":"positive regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"up-regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up-regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"upregulation of viral budding through the ESCRT machinery","type":"related"},{"name":"upregulation of viral budding via host ESCRT complex","type":"exact"}],"termid":"GO:1903774"}


id: PBO:0083038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; F1 translationally regulates ATP6 and ATP8 expression to achieve a balanced output of ATP synthase genes encoded in nucleus and mitochondria; phosphorylated","termid":"PBO:0083038"}


id: MONDO:0010564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deuteranopia is a type of color vision deficiency where the green photoreceptors are absent. It affects hue discrimination in the same way as protanopia, but without the dimming effect. Like protanopia, it is hereditary, sex-linked, and found in about 1% of the male population.","definition_xrefs":["EFO:0005581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorblindness, partial","termid":"MONDO:0000014"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"red-green color blindness","secondary_identifiers":["DOID:13909","MEDGEN:102324","SCTID:77479002","UMLS:C0155016","ICD10CM:H53.53","OMIM:303800","Orphanet:319698","ICD9:368.52"],"synonyms":[{"name":"CBD","type":"related"},{"name":"Deutan colorblindness","type":"related"},{"name":"Deutan defect","type":"exact"},{"name":"Deuteranomaly","type":"related"},{"name":"Green colorblindness","type":"related"},{"name":"colorblindness, deutan","type":"exact"},{"name":"colorblindness, partial, DEUTAN series","type":"related"},{"name":"deuteranopia","type":"exact"},{"name":"partial achromatopsia, deutan type","type":"exact"},{"name":"reduced red-green discrimination","type":"exact"}],"termid":"MONDO:0010564","xrefs":{"Monarch":{"xref_id":"0010564"}}}


id: GO:0050742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via S-(4a-FMN)-L-cysteine.","definition_xrefs":["RESID:AA0351"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via S-(4a-FMN)-L-cysteine (obsolete GO:0050742)","termid":"GO:0050742"}


id: PBO:0005121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport (predicted)","termid":"PBO:0005121"}


id: GO:0008410
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77332,78672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008775"},{"annotations":[93390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008260"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a coenzyme A (CoA) group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"CoA-transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.8.3.-"],"termid":"GO:0008410","terms_by_termid":{"GO:0008260":null,"GO:0008775":null}}


id: PBO:0040624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 3","termid":"PBO:0040624"}


id: PBO:0075169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D3 polypeptide","termid":"PBO:0075169"}


id: MONDO:0006996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute onset of severe, life-threatening hyperthyroidism caused by a sudden release of excessive thyroid hormone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism","termid":"MONDO:0004425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid crisis","secondary_identifiers":["MedDRA:10043705","MEDGEN:11813","ICD9:242.91","MESH:D013958","icd11.foundation:1215823328","NCIT:C112836","UMLS:C0040127","ICD9:242.81","SCTID:29028009","EFO:1001212","HP:0011782","DOID:12837"],"synonyms":[{"name":"thyroid crisis","type":"exact"},{"name":"thyroid crisis (disease)","type":"exact"},{"name":"thyroid storm","type":"exact"},{"name":"thyrotoxic crisis","type":"exact"}],"termid":"MONDO:0006996","xrefs":{"Monarch":{"xref_id":"0006996"}}}


id: PBO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rapidly internalised","termid":"PBO:0002419"}


id: PBO:0071789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P and MRP subunit p25","termid":"PBO:0071789"}


id: PBO:0065560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTGES3L-AARSD1 readthrough","termid":"PBO:0065560"}


id: GO:1905332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of morphogenesis of an epithelium.","definition_xrefs":["GO_REF:0000058","PMID:25745997","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"positively_regulates","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of morphogenesis of an epithelium","synonyms":[{"name":"activation of epithelium morphogenesis","type":"narrow"},{"name":"activation of morphogenesis of an epithelium","type":"narrow"},{"name":"positive regulation of epithelium morphogenesis","type":"exact"},{"name":"up regulation of epithelium morphogenesis","type":"exact"},{"name":"up regulation of morphogenesis of an epithelium","type":"exact"},{"name":"up-regulation of epithelium morphogenesis","type":"exact"},{"name":"up-regulation of morphogenesis of an epithelium","type":"exact"},{"name":"upregulation of epithelium morphogenesis","type":"exact"},{"name":"upregulation of morphogenesis of an epithelium","type":"exact"}],"termid":"GO:1905332"}


id: PBO:0068409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNFT1 divergent transcript","termid":"PBO:0068409"}


id: PBO:0072524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 53","termid":"PBO:0072524"}


id: PBO:0043808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase N subunit 2","termid":"PBO:0043808"}


id: GO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During conjugation without cellular fusion, the process that results in pairing complementary mating types. Localized morphological, cytological, and cytoskeletal changes connect the mating types without cytoplasmic mixing.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion between unicellular organisms","termid":"GO:0098610"},{"relation_name":"part_of","term_name":"conjugation with mutual genetic exchange","termid":"GO:0000748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"conjugant formation","termid":"GO:0000761"}


id: MONDO:0700019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 12 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 disorder","termid":"MONDO:0700019","xrefs":{"Monarch":{"xref_id":"0700019"}}}


id: PBO:0048109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-fucosidase 1 pseudogene 1","termid":"PBO:0048109"}


id: PATO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having thin filamentous extensions at its edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamentous","termid":"PATO:0001360"}


id: MONDO:0001794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infestation of the pubic hair by the pthirus pubis parasite which results in mild to intense itching and macular lesions. The parasite, also known as crab lice, is transmitted through skin to skin contact with an infected person or through direct contact with infested objects.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lice infestation","termid":"MONDO:0003472"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Pthirus pubis infestation","secondary_identifiers":["DOID:13760","ICD9:132.2","SCTID:71011005","MEDGEN:10616","NCIT:C35777","UMLS:C0030759","ICD10CM:B85.3"],"synonyms":[{"name":"Pediculus pubis","type":"exact"},{"name":"Phthirus pubis","type":"exact"},{"name":"Phthirus pubis [pubic louse]","type":"exact"},{"name":"Phthirus/pediculus pubis - pubic lice - crabs","type":"exact"},{"name":"Phthirus/pediculus pubis - pubic lice - crabs (& infestation)","type":"exact"},{"name":"Pthirus pubis infection","type":"exact"},{"name":"crabs","type":"exact"},{"name":"infections, Pthirus pubis","type":"related"},{"name":"infestation by Phthirus pubis","type":"exact"},{"name":"pediculosis pubis","type":"exact"},{"name":"phthiriasis","type":"exact"},{"name":"phthiriasis pubis","type":"exact"}],"termid":"MONDO:0001794","xrefs":{"Monarch":{"xref_id":"0001794"}}}


id: PBO:0034752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex ubiquitin-like protein ligase subunit Cti6","termid":"PBO:0034752"}


id: PBO:0091803
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2798041delT","termid":"PBO:0091803"}


id: GO:0060724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an extracellular messenger, and in cooperation with a primary EGF receptor, initiating a change in cell activity through the EGF receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060724)","synonyms":[{"name":"coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060724"}


id: PBO:0071954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 4","termid":"PBO:0071954"}


id: FYPO:0004609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more spindle pole bodies (SPBs) than normal during one or both meiotic nuclear divisions. In this phenotype, extra SPBs typically contain normal components but seldom attach to spindle microtubules.","definition_xrefs":["PMID:15569158","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"increased meiotic spindle pole body duplication","termid":"FYPO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"spindle pole bodies present in increased numbers during meiosis","synonyms":[{"name":"SPBs present in increased numbers during meiosis","type":"exact"},{"name":"excess meiotic spindle pole bodies present","type":"exact"},{"name":"excess spindle pole bodies present during meiosis","type":"exact"},{"name":"extra spindle pole bodies present during meiosis","type":"exact"},{"name":"pseudo-SPBs present during meiosis","type":"exact"},{"name":"spindle pole bodies present in greater numbers during meiosis","type":"exact"},{"name":"spindle pole bodies present in increased numbers during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004609"}


id: PBO:0043286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member O, pseudogene","termid":"PBO:0043286"}


id: PBO:0058582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715b","termid":"PBO:0058582"}


id: PBO:0072401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 6","termid":"PBO:0072401"}


id: PBO:0050412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 1","termid":"PBO:0050412"}


id: MONDO:0957216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 21","secondary_identifiers":["MEDGEN:1841035","OMIM:620311","UMLS:C5830399"],"termid":"MONDO:0957216","xrefs":{"Monarch":{"xref_id":"0957216"}}}


id: FYPO:0004329
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type) in regions containing ribosomal DNA (rDNA). Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GO:0051306","PMID:17032733","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid separation","termid":"FYPO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic rDNA separation","synonyms":[{"name":"normal mitotic chromosome separation at rDNA","type":"exact"},{"name":"normal mitotic rDNA separation during vegetative growth","type":"exact"},{"name":"normal mitotic ribosomal DNA separation","type":"exact"},{"name":"normal mitotic sister chromatid separation at rDNA","type":"exact"},{"name":"normal rDNA separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004329"}


id: PR:Q96WV5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02555","PANTHER:PTHR19876:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.04","secondary_identifiers":["UniProtKB:Q96WV5"],"synonyms":[{"name":"Spom972h-COPA","type":"exact"},{"name":"alpha-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WV5"}


id: PBO:0034351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_mesoparasite","termid":"PBO:0034351"}


id: MONDO:0007252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare multiple congenital malformation syndrome characterized by congenital contractures of hand and feet with variable degrees of severity of camptodactyly, clubfoot and, less frequently, cleft palate. Intelligence is normal but in some cases, additional abnormalities, such as short stature, kyphoscoliosis, ptosis, micrognathia, and cryptorchidism may also be present. Gordon syndrome, Marden-Walker syndrome and arthrogryposis with oculomotor limitation and electroretinal anomalies clinically and genetically overlap, and could represent variable expressions of the same condition.","definition_xrefs":["Orphanet:376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gordon syndrome","secondary_identifiers":["GARD:2553","UMLS:C0220666","ICD9:579.8","NORD:1199","OMIM:114300","DOID:0111607","SCTID:237850008","MESH:C537288","MEDGEN:66314"],"synonyms":[{"name":"DA3","type":"related"},{"name":"Gordon syndrome","type":"exact"},{"name":"arthrogryposis distal type 3","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type 2A","type":"related"},{"name":"arthrogryposis, distal, type 3","type":"related"},{"name":"camptodactyly, cleft palate, and clubfoot","type":"related"},{"name":"camptodactyly-cleft palate-clubfoot syndrome","type":"exact"},{"name":"distal arthrogryposis type 3","type":"exact"},{"name":"distal arthrogryposis type IIA","type":"exact"}],"termid":"MONDO:0007252","xrefs":{"Monarch":{"xref_id":"0007252"}}}


id: PBO:0087550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; part of TauB domain of TFIIIC that binds DNA at BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding; largest of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); colocalizes with condensin at pol III genes and several ETC (extra TFIIIC) sites; may have a role in recruiting or stabilizing Scc2/4 and condensin on chromosomes","termid":"PBO:0087550"}


id: PBO:0074389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth muscle induced lncRNA, enhancer of proliferation","termid":"PBO:0074389"}


id: MONDO:0000028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epilepsy, hot water (obsolete MONDO:0000028)","termid":"MONDO:0000028","xrefs":{"Monarch":{"xref_id":"0000028"}}}


id: FYECO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cisplatin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cisplatin","termid":"FYECO:0000091"}


id: GO:0050673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation","termid":"GO:0050673"}


id: PBO:0044046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 3","termid":"PBO:0044046"}


id: MONDO:0012904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive myoclonic epilepsy in which the cause of the disease is a mutation in the PRICKLE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, progressive myoclonic, 1B","secondary_identifiers":["DOID:0111448","MEDGEN:394003","OMIM:612437","SCTID:702326000","GARD:15556","UMLS:C2676254","ICD9:345.10","MESH:C580388"],"synonyms":[{"name":"EPM1B","type":"related"},{"name":"PRICKLE1 progressive myoclonic epilepsy","type":"exact"},{"name":"epilepsy, progressive myoclonic 1B","type":"exact"},{"name":"epilepsy, progressive myoclonic, 1B","type":"exact"},{"name":"epilepsy, progressive myoclonic, type 1B","type":"exact"},{"name":"progressive myoclonic epilepsy caused by mutation in PRICKLE1","type":"exact"}],"termid":"MONDO:0012904","xrefs":{"Monarch":{"xref_id":"0012904"}}}


id: PBO:0064327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLS1 antisense RNA 1","termid":"PBO:0064327"}


id: SO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of 3 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -75 bounds -100 to -50, res i+1: psi 140 bounds 110 to 170. An extra restriction of the length of the O to O distance would be useful, that it be less than 5 Angstrom. More precisely these two oxygens are the main chain carbonyl oxygen atoms of residues i-1 and i+1.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"catmat_right_handed_three","synonyms":[{"name":"catmat-3r","type":"exact"}],"termid":"SO:0100006"}


id: MONDO:0019585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleromyxedema without monoclonal gammopathy is a form of atypical lichen myxedematosus, characterized by a generalized sclerodermoid infiltration of skin studded with multiple, firm papules of 1-3 mm in diameter involving face (leonine appearance), trunk, and limbs, without monoclonal gammopathy. The involvement of the face can be missing and pruritus may be prominent.","definition_xrefs":["Orphanet:90400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical lichen myxedematosus","termid":"MONDO:0019447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scleromyxedema without monoclonal gammopathy","secondary_identifiers":["GARD:19144","MEDGEN:1843341","UMLS:C5681463"],"termid":"MONDO:0019585","xrefs":{"Monarch":{"xref_id":"0019585"}}}


id: MONDO:0004388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular spermatocytic seminoma (obsolete MONDO:0004388)","termid":"MONDO:0004388","xrefs":{"Monarch":{"xref_id":"0004388"}}}


id: GO:0019393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucarate, the anion of glucaric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid biosynthetic process","termid":"GO:0019578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucarate biosynthetic process","synonyms":[{"name":"glucarate anabolism","type":"exact"},{"name":"glucarate biosynthesis","type":"exact"},{"name":"glucarate formation","type":"exact"},{"name":"glucarate synthesis","type":"exact"}],"termid":"GO:0019393"}


id: GO:0038121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 21 (CCL21) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-C motif chemokine 21 receptor activity","synonyms":[{"name":"CCL21 receptor activity","type":"related"}],"termid":"GO:0038121"}


id: FYPO:0002052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal sporulation frequency","synonyms":[{"name":"normal ascospore formation frequency","type":"exact"},{"name":"normal sporulation occurrence","type":"exact"}],"termid":"FYPO:0002052"}


id: PBO:0085730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the regulation of endocytosis; transiently recruited to actin cortical patches in a SLA1-dependent manner after late coat component assembly; GFP-fusion protein localizes to the periphery, cytoplasm, bud, and bud neck","termid":"PBO:0085730"}


id: PBO:0042447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 5","termid":"PBO:0042447"}


id: PBO:0064962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 14","termid":"PBO:0064962"}


id: MONDO:0957230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte/zygote/embryo maturation arrest 18","secondary_identifiers":["MEDGEN:1841077","UMLS:C5830441","OMIM:620332"],"termid":"MONDO:0957230","xrefs":{"Monarch":{"xref_id":"0957230"}}}


id: PBO:0042034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 88C","termid":"PBO:0042034"}


id: MONDO:0026188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic overgrowth/obesity syndrome (obsolete MONDO:0026188)","secondary_identifiers":["Orphanet:183573"],"termid":"MONDO:0026188","xrefs":{"Monarch":{"xref_id":"0026188"}}}


id: GO:0031102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of neuronal processes such as axons or dendrites in response to their loss or damage.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection regeneration","synonyms":[{"name":"neurite regeneration","type":"narrow"}],"termid":"GO:0031102"}


id: MOD:01161
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes oxygen atoms from a residue without the removal of hydrogen atoms.","definition_xrefs":["PubMed:14235557","Unimod:447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reduced residue","termid":"MOD:01472"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxygenated residue","synonyms":[{"name":"Deoxy","type":"related"},{"name":"dOxyRes","type":"exact"},{"name":"reduction","type":"related"}],"termid":"MOD:01161"}


id: MONDO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast adenocarcinoma characterized by the presence of tall columnar neoplastic cells that contain intracytoplasmic mucin. Grossly, cystic changes are identified.","definition_xrefs":["NCIT:C40354"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"breast mucinous carcinoma","termid":"MONDO:0002707"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"mucinous cystadenocarcinoma","termid":"MONDO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast mucinous cystadenocarcinoma","secondary_identifiers":["UMLS:C1511318","DOID:3609","MEDGEN:267769"],"synonyms":[{"name":"breast mucinous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0002705","xrefs":{"Monarch":{"xref_id":"0002705"}}}


id: MONDO:0003234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A astrocytoma (excluding glioblastoma) that involves the cranial nerve II.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant cranial nerve neoplasm","termid":"MONDO:0002433"},{"relation_name":"is_a","term_name":"optic nerve glioma","termid":"MONDO:0003235"},{"relation_name":"is_a","term_name":"optic tract astrocytoma","termid":"MONDO:0024649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"optic nerve astrocytoma","secondary_identifiers":["NCIT:C7533","MEDGEN:235405","NCIT:C6769","UMLS:C1335114","DOID:4991"],"synonyms":[{"name":"astrocytic tumor of optic nerve","type":"exact"},{"name":"astrocytic tumour of optic nerve","type":"exact"},{"name":"astrocytoma (excluding glioblastoma) of cranial nerve II","type":"exact"},{"name":"astrocytoma of optic nerve","type":"exact"},{"name":"astrocytoma of the optic nerve","type":"exact"},{"name":"cranial nerve II astrocytoma (excluding glioblastoma)","type":"exact"},{"name":"optic nerve astrocytoma","type":"exact"},{"name":"optic tract astrocytoma","type":"related"},{"name":"optic tract astrocytoma (excluding glioblastoma)","type":"related"}],"termid":"MONDO:0003234","xrefs":{"Monarch":{"xref_id":"0003234"}}}


id: MONDO:0019973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent placoid maculopathy is characterized by white plaque-like lesions involving the macula but sparing the peripapillary areas of both eyes. It has been described in five patients. In contrast to patients with macular serpiginous choroiditis presenting with similar lesions, the five patients reported so far with persistent placoid maculopathy had good visual acuity until the onset of choroidal neovascularization (CNV) or pigmentary mottling. The macular lesions fade after several months or years, but the vascular anomalies persist leading to a loss of central vision.","definition_xrefs":["Orphanet:97341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"persistent placoid maculopathy","secondary_identifiers":["icd11.foundation:1143591468","GARD:19369","SCTID:719297006","UMLS:C4304823","MEDGEN:930492"],"termid":"MONDO:0019973","xrefs":{"Monarch":{"xref_id":"0019973"}}}


id: GO:0071278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cesium stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cesium ion","termid":"GO:0010164"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cesium ion","synonyms":[{"name":"cellular response to cesium","type":"exact"}],"termid":"GO:0071278"}


id: PBO:0043106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity factor 8","termid":"PBO:0043106"}


id: MONDO:0008111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculodentodigital dysplasia (ODDD) is characterized by craniofacial, neurologic, limb and ocular abnormalities.","definition_xrefs":["Orphanet:2710"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"oculodentodigital dysplasia","secondary_identifiers":["DOID:0060291","GARD:7239","ICD9:759.89","UMLS:C0812437","OMIM:164200","MedDRA:10063691","MEDGEN:167236","SCTID:38215007","MESH:C563160","NORD:1519"],"synonyms":[{"name":"Meyer-Schwickerath syndrome","type":"exact"},{"name":"ODDD","type":"related"},{"name":"ODDD syndrome","type":"exact"},{"name":"Oculo-Dento-Digital Dysplasia","type":"exact"},{"name":"oculo-dento-digital dysplasia","type":"exact"},{"name":"oculo-dento-digital syndrome","type":"related"},{"name":"oculodentodigital dysplasia","type":"exact"},{"name":"oculodentodigital syndrome","type":"related"},{"name":"oculodentoosseous dysplasia","type":"exact"},{"name":"odd syndrome","type":"exact"}],"termid":"MONDO:0008111","xrefs":{"Monarch":{"xref_id":"0008111"}}}


id: MONDO:0015003
data:
  {"annotated_genes":["SJAG_02007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88956],"is_not":false,"summary":null,"term":"MONDO:0015003"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0003441","MONDO:0005066","MONDO:0005559","MONDO:0002525"],"is_obsolete":false,"name":"dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310634","GARD:13488","MEDGEN:934601","Orphanet:508093","OMIM:617282","DOID:0081419"],"synonyms":[{"name":"DYTOABG","type":"exact"},{"name":"dystonia 29, childhood-onset","type":"related"},{"name":"dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities","type":"exact"},{"name":"dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities; DYTOABG","type":"exact"}],"termid":"MONDO:0015003","terms_by_termid":{"MONDO:0015003":null},"xrefs":{"Monarch":{"xref_id":"0015003"}}}


id: GO:1904875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:17389648","GO_REF:0000059","GOC:BHF","GOC:rl","GOC:BHF_telomere"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA ligase activity (obsolete GO:1904875)","termid":"GO:1904875"}


id: PBO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine) methyltransferase (predicted)","termid":"PBO:0002007"}


id: PBO:0054359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1752","termid":"PBO:0054359"}


id: MONDO:0859086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked 110","secondary_identifiers":["UMLS:C5774180","MEDGEN:1823954","OMIM:301095"],"termid":"MONDO:0859086","xrefs":{"Monarch":{"xref_id":"0859086"}}}


id: GO:0071846
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76398],"is_not":false,"summary":null,"term":"GO:0071846"}]},"cv_name":"biological_process","definition":"An actin filament severing process that results in the removal of actin filament branches specifically at the branch points.","definition_xrefs":["GOC:jh","GOC:mah","PMID:20362448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin filament debranching","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071846","terms_by_termid":{"GO:0071846":null}}


id: MOD:01849
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["PubMed:20805503","RESID:AA0204#CYS2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-D-cysteine","termid":"MOD:01850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine (Cys-Cys)","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"CROSSLNK S-(2-aminovinyl)-D-cysteine (Cys-Cys)","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"}],"termid":"MOD:01849"}


id: PBO:0079068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-2","termid":"PBO:0079068"}


id: PBO:0059281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L39","termid":"PBO:0059281"}


id: GO:0015016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + alpha-D-glucosaminyl-[heparan sulfate](n) = adenosine 3',5'-bisphosphate + 2 H+ + N-sulfo-alpha-D-glucosaminyl-[heparan sulfate](n).","definition_xrefs":["RHEA:21980","EC:2.8.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"heparan sulfate N-sulfotransferase activity","secondary_identifiers":["GO:0004393","Reactome:R-HSA-2022860","GO:0051910","MetaCyc:HEPARITIN-SULFOTRANSFERASE-RXN","GO:0015022"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:N-desulfoheparin N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:heparitin N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate:N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"N-HSST activity","type":"related"},{"name":"N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"N-heparan sulfate sulfotransferase activity","type":"related"},{"name":"PAPS:DSH sulfotransferase activity","type":"related"},{"name":"PAPS:N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"[heparan sulfate]-glucosamine N-sulfotransferase activity","type":"exact"},{"name":"[heparan sulphate]-glucosamine N-sulphotransferase activity","type":"exact"},{"name":"desulfoheparin sulfotransferase activity","type":"exact"},{"name":"glucosaminyl N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparan sulfate 2-N-sulfotransferase activity","type":"related"},{"name":"heparan sulfate N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparin N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparin N-deacetylase/N-sulphotransferase activity","type":"related"},{"name":"heparin N-sulfotransferase activity","type":"related"},{"name":"heparin-glucosamine N-sulfotransferase activity","type":"exact"},{"name":"heparitin N-sulfotransferase activity","type":"exact"},{"name":"heparitin N-sulphotransferase activity","type":"exact"},{"name":"heparitin sulfotransferase activity","type":"exact"}],"termid":"GO:0015016"}


id: MONDO:0021132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An overproduction of parathyroid hormone that is autonomous and often associated with chronic secondary hyperparathyroidism.","definition_xrefs":["NCIT:C114821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperparathyroidism","termid":"MONDO:0001741"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tertiary hyperparathyroidism","secondary_identifiers":["UMLS:C0271858","ICD9:588.89","SCTID:78200003","MEDGEN:488837","icd11.foundation:10683191"],"synonyms":[{"name":"tertiary hyperparathyroidism","type":"exact"}],"termid":"MONDO:0021132","xrefs":{"Monarch":{"xref_id":"0021132"}}}


id: GO:0150153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-17A production.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of interleukin-17 production","termid":"GO:0032740"},{"relation_name":"is_a","term_name":"regulation of interleukin-17A production","termid":"GO:0150151"},{"relation_name":"positively_regulates","term_name":"interleukin-17A production","termid":"GO:0097087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-17A production","synonyms":[{"name":"positive regulation of interleukin-17A biosynthetic process","type":"narrow"}],"termid":"GO:0150153"}


id: PBO:0046826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 4","termid":"PBO:0046826"}


id: MONDO:1012666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An orthokeratotic palmoplantar hyperkeratosis leading to thickened and hardened footpads that occurs in dogs starting at an age of 18 to 24 weeks of age due to a mutation in the FAM83G gene.","definition_xrefs":["PMID:24832243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"hyperkeratosis, non-human animal","termid":"MONDO:1012976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary footpad hyperkeratosis, FAM83G-related, dog","secondary_identifiers":["OMIA:001327-9615"],"synonyms":[{"name":"HFH","type":"exact"},{"name":"hyperkeratosis, palmoplantar, FAM83G-related, dog","type":"exact"}],"termid":"MONDO:1012666","xrefs":{"Monarch":{"xref_id":"1012666"}}}


id: PBO:0072056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 26","termid":"PBO:0072056"}


id: GO:0140729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that reduces or removes the toxicity of an endogenously produced substance. Mechanisms of resistance to endogenously produced compounds include modification the compound, export, sequestration, or mutations in the target enzyme.","definition_xrefs":["PMID:29763292","PMID:21923907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"self-resistance to endogenously produced metabolite","synonyms":[{"name":"prevention of self-toxicity","type":"exact"},{"name":"self-resistance to bioactive secondary metabolite","type":"exact"},{"name":"self-resistance to endogenously produced compound","type":"exact"},{"name":"self-resistance to endogenously produced toxin","type":"exact"}],"termid":"GO:0140729"}


id: PBO:0111867
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type","termid":"PBO:0111867"}


id: GO:0031498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled breakdown of chromatin from a higher order structure into its simpler subcomponents, DNA, histones, other proteins, and sometimes RNA.","definition_xrefs":["PMID:20404130"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin disassembly (obsolete GO:0031498)","synonyms":[{"name":"chromatin maintenance","type":"broad"}],"termid":"GO:0031498"}


id: PBO:0041471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 putative open reading frame 40","termid":"PBO:0041471"}


id: PBO:0056585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCUR1 pseudogene 1","termid":"PBO:0056585"}


id: PBO:0085600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cell separation during budding; one of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; may play an indirect role in fluid-phase endocytosis; protein abundance increases in response to DNA replication stress; SDS24 has a paralog, SDS23, that arose from the whole genome duplication","termid":"PBO:0085600"}


id: PR:Q9UU91
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A receptor expression-enhancing protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein yop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.08c","secondary_identifiers":["UniProtKB:Q9UU91"],"synonyms":[{"name":"SPCC830.08c","type":"related"},{"name":"Spom972h-REEP5","type":"exact"}],"termid":"PR:Q9UU91"}


id: GO:0052426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism effects a change in the structure or function of its symbiont organism, mediated by a substance secreted by a type IV secretion system in the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052426)","synonyms":[{"name":"modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system","type":"exact"}],"termid":"GO:0052426"}


id: GO:0030173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi membrane (obsolete GO:0030173)","synonyms":[{"name":"Golgi integral membrane protein","type":"related"},{"name":"integral to Golgi membrane","type":"narrow"}],"termid":"GO:0030173"}


id: PBO:0086277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a possible role in tRNA export; shows similarity to 6-phosphogluconolactonase non-catalytic domains but does not exhibit this enzymatic activity; homologous to Sol3p and Sol4p; SOL2 has a paralog, SOL1, that arose from the whole genome duplication","termid":"PBO:0086277"}


id: MONDO:0012518
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87889],"is_not":false,"summary":null,"term":"MONDO:0012518"}]},"cv_name":"mondo","definition":"Any congenital myasthenic syndromes with glycosylation defect in which the cause of the disease is a mutation in the GFPT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome with tubular aggregates","termid":"MONDO:0000182"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:765249","OMIM:610542","UMLS:C3552335","GARD:18451","NCIT:C168997","DOID:0110660"],"synonyms":[{"name":"CMS12","type":"exact"},{"name":"GFPT1 congenital myasthenic syndromes with glycosylation defect","type":"exact"},{"name":"congenital myasthenia 12 with tubular aggregates","type":"exact"},{"name":"congenital myasthenic syndrome type 12","type":"exact"},{"name":"congenital myasthenic syndromes with glycosylation defect caused by mutation in GFPT1","type":"exact"},{"name":"myasthenia, congenital, 12, with tubular aggregates","type":"exact"},{"name":"myasthenic syndrome, congenital, 12","type":"related"},{"name":"myasthenic syndrome, congenital, type 12","type":"exact"},{"name":"myasthenic syndrome, congenital, with tubular aggregates 1","type":"related"}],"termid":"MONDO:0012518","terms_by_termid":{"MONDO:0012518":null},"xrefs":{"Monarch":{"xref_id":"0012518"}}}


id: MONDO:0009422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypohidrosis with abnormal palmar dermal Ridges","secondary_identifiers":["OMIM:241120","UMLS:C1855856","MEDGEN:340989","MESH:C565481"],"synonyms":[{"name":"hypohidrosis with abnormal palmar dermal Ridges","type":"exact"},{"name":"sweat gland hypoplasia","type":"related"}],"termid":"MONDO:0009422","xrefs":{"Monarch":{"xref_id":"0009422"}}}


id: GO:0019908
data:
  {"annotated_genes":["SJAG_00995","SJAG_04420","SJAG_03206","SJAG_00512","SJAG_04368","SJAG_03061","SJAG_00758","SJAG_01213","SJAG_01149","SJAG_03967","SJAG_04614","SJAG_03618","SJAG_00901","SJAG_00150","SJAG_02057","SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97748,112901,81357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[110853,111011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[72256,110958,72030,78052,94119,76275,116822,80598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[61634,67526,78108],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"Cyclin-dependent protein kinase (CDK) complex found in the nucleus.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01149":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03206":null,"SJAG_03618":null,"SJAG_03967":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear cyclin-dependent protein kinase holoenzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"CDK holoenzyme","type":"broad"}],"termid":"GO:0019908","terms_by_termid":{"GO:0005675":null,"GO:0070691":null,"GO:0070692":null,"GO:0070985":null}}


id: PBO:0073876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 4","termid":"PBO:0073876"}


id: MONDO:0975758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvenular haemangioma","secondary_identifiers":["UMLS:C1304506","icd11.foundation:1766508726","MEDGEN:725856","Orphanet:675369"],"termid":"MONDO:0975758","xrefs":{"Monarch":{"xref_id":"0975758"}}}


id: PBO:0056736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MET proto-oncogene, receptor tyrosine kinase","termid":"PBO:0056736"}


id: GO:1900809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumigaclavine C, a fungal ergot alkaloid.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23435153","PMID:26972831","PMID:15933009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergot alkaloid biosynthetic process","termid":"GO:0035837"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fumigaclavine C biosynthetic process","secondary_identifiers":["GO:1900807"],"synonyms":[{"name":"fumigaclavine C anabolism","type":"exact"},{"name":"fumigaclavine C biosynthesis","type":"exact"},{"name":"fumigaclavine C formation","type":"exact"},{"name":"fumigaclavine C metabolic process","type":"broad"},{"name":"fumigaclavine C metabolism","type":"broad"},{"name":"fumigaclavine C synthesis","type":"exact"}],"termid":"GO:1900809"}


id: GO:0030348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a syntaxin-3 SNAP receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syntaxin binding","termid":"GO:0019905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"syntaxin-3 binding","termid":"GO:0030348"}


id: GO:0031391
data:
  {"annotated_genes":["SJAG_02182","SJAG_00729","SJAG_01010","SJAG_04150","SJAG_00272"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66209,74542,78993,79678,114820],"is_not":false,"summary":null,"term":"GO:0031391"}]},"cv_name":"cellular_component","definition":"A pentameric replication factor C (RLC) complex, which unloads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) from chromatin and has roles in telomere length regulation and other aspects of genome stability. In Saccharomyces the subunits are known as Elg1p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.","definition_xrefs":["PMID:23499004","PMID:27664980","PMID:14614842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"Elg1 RFC-like complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"Elg1-RFC","type":"exact"},{"name":"Elg1-RLC","type":"exact"},{"name":"RFC (Elg1)","type":"exact"}],"termid":"GO:0031391","terms_by_termid":{"GO:0031391":null}}


id: MONDO:0019925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paternal uniparental disomy of chromosome 21 is an uniparental disomy of paternal origin that most likely does not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only father is a carrier.","definition_xrefs":["Orphanet:96195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"},{"relation_name":"is_a","term_name":"chromosome 21 disorder","termid":"MONDO:0700124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome 21","secondary_identifiers":["UMLS:C4707801","MEDGEN:1647612","icd11.foundation:2038740231","SCTID:766720000","GARD:19344"],"synonyms":[{"name":"UPD(21)pat","type":"exact"},{"name":"paternal uniparental disomy of chromosome type 21","type":"exact"}],"termid":"MONDO:0019925","xrefs":{"Monarch":{"xref_id":"0019925"}}}


id: GO:1900800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cspyrone B1.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"cspyrone B1 metabolic process","synonyms":[{"name":"cspyrone B1 metabolism","type":"exact"}],"termid":"GO:1900800"}


id: PR:Q9UT54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC806.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0593 mitochondrial protein C806.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.05","synonyms":[{"name":"Spom972h-SPAC806.05","type":"exact"}],"termid":"PR:Q9UT54"}


id: PR:O74476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sal3 gene.","definition_xrefs":["UniProtKB:O74476","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit beta-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.03","synonyms":[{"name":"Spom972h-sal3","type":"exact"},{"name":"importin beta sal3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74476"}


id: MONDO:0020571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidemic louse-borne typhus","termid":"MONDO:0019362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relapsing epidemic typhus","secondary_identifiers":["UMLS:C5681812","GARD:19726","MEDGEN:1826151","Orphanet:99991"],"termid":"MONDO:0020571","xrefs":{"Monarch":{"xref_id":"0020571"}}}


id: PBO:0089704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER fusion GTPase, atlastin Sey1","termid":"PBO:0089704"}


id: MONDO:0021668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder involving pain (obsolete MONDO:0021668)","secondary_identifiers":["DOID:0060164","SCTID:373673007"],"synonyms":[{"name":"pain disorder","type":"exact"}],"termid":"MONDO:0021668","xrefs":{"Monarch":{"xref_id":"0021668"}}}


id: PBO:0059261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L27","termid":"PBO:0059261"}


id: PBO:0056399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE3 antisense RNA 1","termid":"PBO:0056399"}


id: MONDO:0014619
data:
  {"annotated_genes":["SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87211],"is_not":false,"summary":null,"term":"MONDO:0014619"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitive trichothiodystrophy","termid":"MONDO:0002470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 3, photosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111871","GARD:16102","OMIM:616395","MEDGEN:865608","UMLS:C4017171","NCIT:C173099"],"synonyms":[{"name":"TTD3","type":"related"},{"name":"trichothiodystrophy 3, photosensitive","type":"exact"},{"name":"trichothiodystrophy, complementation group A","type":"related"}],"termid":"MONDO:0014619","terms_by_termid":{"MONDO:0014619":null},"xrefs":{"Monarch":{"xref_id":"0014619"}}}


id: MONDO:0019757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alobar holoprosencephaly is the most severe classical form of holoprosencephaly (HPE) characterized by a single brain ventricle and no interhemispheric fissure.","definition_xrefs":["Orphanet:93925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"alobar holoprosencephaly","secondary_identifiers":["SCTID:253137003","UMLS:C0431363","GARD:16831","icd11.foundation:381193163","MEDGEN:140909"],"termid":"MONDO:0019757","xrefs":{"Monarch":{"xref_id":"0019757"}}}


id: GO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multi-component enzymatic machine at the cytoplasmic replication fork, which mediates DNA replication. Includes DNA primase, DNA polymerase, DNA helicase, and other proteins.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replisome","termid":"GO:0030894"},{"relation_name":"part_of","term_name":"cytoplasmic replication fork","termid":"GO:0043597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic replisome","synonyms":[{"name":"prokaryotic replisome","type":"exact"}],"termid":"GO:0043600"}


id: GO:0044193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the host cell mitochondrial envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host organelle outer membrane","termid":"GO:0039661"},{"relation_name":"is_a","term_name":"host cell mitochondrial membrane","termid":"GO:0044191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial outer membrane","termid":"GO:0044193"}


id: MONDO:0000709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Crohn disease involving a pathogenic inflammatory response in the ileum.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small bowel Crohn disease","termid":"MONDO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"Crohn ileitis","secondary_identifiers":["MedDRA:10021312","NCIT:C35329","CSP:1248-5305","DOID:0060189","MESH:D007079","NDFRT:N0000001662","MEDGEN:82754","ICD9:558.9","SCTID:52457000","UMLS:C0267380"],"synonyms":[{"name":"Crohn's ileitis","type":"exact"},{"name":"ileitis","type":"related"}],"termid":"MONDO:0000709","xrefs":{"Monarch":{"xref_id":"0000709"}}}


id: GO:0060445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the salivary gland is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}


id: GO:0051660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the centrosome to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centrosome localization","termid":"GO:0051642"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of centrosome localization","synonyms":[{"name":"centrosome positioning","type":"exact"},{"name":"establishment of centrosome localisation","type":"exact"}],"termid":"GO:0051660"}


id: GO:0022620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a microgametophyte. The microgametophyte vegetative cell gives rise to the pollen tube.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microgametophyte vegetative cell differentiation","synonyms":[{"name":"tube cell differentiation","type":"related"},{"name":"vegetative cell differentiation","type":"related"}],"termid":"GO:0022620"}


id: GO:0102847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:3-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:3-2-16:2-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102847)","termid":"GO:0102847"}


id: GO:0106157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: 2-oxoglutarate + [protein]-L-arginine + O2 = [protein]-(3R)-3-hydroxy-L-arginine + CO2 + succinate.","definition_xrefs":["PMID:29563586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"peptidyl-arginine 3-dioxygenase activity","secondary_identifiers":["RHEA:56744","GO:0140554","Reactome:R-HSA-9629869","EC:1.14.11.73","Reactome:R-HSA-9629888"],"synonyms":[{"name":"L-arginine 3-hydroxylase activity","type":"exact"}],"termid":"GO:0106157"}


id: PBO:0082812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved cysteine protease required for autophagy; cleaves Atg8p to a form required for autophagosome and Cvt vesicle generation","termid":"PBO:0082812"}


id: MONDO:0700245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive epidermolytic ichthyosis","termid":"MONDO:0044742"},{"relation_name":"is_a","term_name":"epidermolytic hyperkeratosis 2","termid":"MONDO:0958184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"epidermolytic hyperkeratosis 2B, autosomal recessive","secondary_identifiers":["MEDGEN:1845041","OMIM:620707","UMLS:C5882753"],"termid":"MONDO:0700245","xrefs":{"Monarch":{"xref_id":"0700245"}}}


id: PBO:0064049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 83","termid":"PBO:0064049"}


id: FYPO:0002369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 56 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased H3-K56 acetylation during vegetative growth","termid":"FYPO:0008270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K56 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3-K56 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K56 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K56 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K56 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3-K56 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3K56 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002369"}


id: MONDO:0004497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A stage of syphilis that occurs fifteen to thirty years after the initial infection; it can include gumma formation and cardiovascular or central nervous system involvement (neurosyphilis).","definition_xrefs":["NCIT:C128414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tertiary syphilis","secondary_identifiers":["MESH:C536774","MEDGEN:56297","UMLS:C0153188","ICD9:097.0","SCTID:72083004","DOID:8200","ICD10CM:A52","ICD9:095.8","ICD9:095.9"],"synonyms":[{"name":"late syphilis","type":"exact"},{"name":"late tertiary syphilis","type":"exact"},{"name":"tertiary syphilis","type":"exact"}],"termid":"MONDO:0004497","xrefs":{"Monarch":{"xref_id":"0004497"}}}


id: PBO:0052397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member C3","termid":"PBO:0052397"}


id: PBO:0078482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-2","termid":"PBO:0078482"}


id: GO:0071949
data:
  {"annotated_genes":["SJAG_01063","SJAG_02489","SJAG_04000","SJAG_00265","SJAG_02827","SJAG_02496","SJAG_03712","SJAG_01466","SJAG_02599","SJAG_01903","SJAG_04608","SJAG_03804","SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60083,61419,65853,70835,71571,71606,72150,72808,73744,78156,94291,111665,115006],"is_not":false,"summary":null,"term":"GO:0071949"}]},"cv_name":"molecular_function","definition":"Binding to the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin adenine dinucleotide binding","termid":"GO:0050660"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00265":null,"SJAG_01063":null,"SJAG_01466":null,"SJAG_01903":null,"SJAG_02489":null,"SJAG_02496":null,"SJAG_02599":null,"SJAG_02827":null,"SJAG_02876":null,"SJAG_03712":null,"SJAG_03804":null,"SJAG_04000":null,"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"FAD binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidized flavin adenine dinucleotide binding","type":"exact"},{"name":"oxidized flavine-adenine dinucleotide binding","type":"exact"}],"termid":"GO:0071949","terms_by_termid":{"GO:0071949":null}}


id: PBO:0083806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that forms a dimer with Ntr2p; also forms a trimer, with Ntr2p and Prp43p, that is involved in spliceosome disassembly; found also in a multisubunit complex with the splicing factor Clf1p; suppressor of prp38-1 mutation","termid":"PBO:0083806"}


id: PBO:0070162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 76 pseudogene","termid":"PBO:0070162"}


id: PBO:0060383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin transcription factor 1","termid":"PBO:0060383"}


id: GO:0120099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a chaperone or scaffold for centriolar proteins during the maturation of the procentriole. Some of its members may become integrated into the growing centriole. Examples are the CPAP(CENPJ)-STIL complex, CEP192-PLK4 complex or CEP152-PLK4 complex in vertebrates.","definition_xrefs":["PMID:21059844","PMID:18207742","GOC:bhm","PMID:17576815","PMID:22020124","PMID:24997597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"procentriole replication complex","termid":"GO:0120099"}


id: GO:0052455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of jasmonic acid in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of jasmonic acid levels in symbiont (obsolete GO:0052455)","synonyms":[{"name":"modulation by organism of jasmonic acid levels in symbiont","type":"exact"}],"termid":"GO:0052455"}


id: PBO:0004733
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia","termid":"PBO:0004733"}


id: MONDO:0013038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic disease characterized by Congenital Lipomatous Overgrowth, progressive, complex and mixed truncal Vascular malformations, Epidermal nevi, and Skeletal anomaly.","definition_xrefs":["Orphanet:140944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"PIK3CA-related overgrowth spectrum","termid":"MONDO:1040002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"CLOVES syndrome","secondary_identifiers":["MESH:C567863","SCTID:719475006","UMLS:C2752042","OMIM:612918","GARD:10939","DOID:0080351","MEDGEN:442876","NCIT:C177122","NORD:979"],"synonyms":[{"name":"CLOVE syndrome","type":"related"},{"name":"CLOVE syndrome, somatic","type":"exact"},{"name":"CLOVES syndrome","type":"exact"},{"name":"congenital lipomatous overgrowth - vascular malformation - epidermal nevi","type":"related"},{"name":"congenital lipomatous overgrowth, vascular malformations, Epidermal nevi, and skeletal/spinal abnormalities","type":"related"},{"name":"congenital lipomatous overgrowth, vascular malformations, and EPIDERMAL nevi","type":"related"},{"name":"congenital lipomatous overgrowth, vascular malformations, and epidermal nevi","type":"exact"},{"name":"congenital lipomatous overgrowth-vascular malformation-epidermal nevi-skeletal anomaly syndrome","type":"exact"},{"name":"congenital lipomatous overgrowth-vascular malformation-epidermal nevi-spinal anomaly syndrome","type":"exact"}],"termid":"MONDO:0013038","xrefs":{"Monarch":{"xref_id":"0013038"}}}


id: GO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The apoptotic death of B cells which is part of B cell tolerance induction.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell deletion","synonyms":[{"name":"B lymphocyte deletion","type":"exact"},{"name":"B-cell deletion","type":"exact"},{"name":"B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002516"}


id: MONDO:0015011
data:
  {"annotated_genes":["SJAG_01816"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88764],"is_not":false,"summary":null,"term":"MONDO:0015011"}]},"cv_name":"mondo","definition":"Any autosomal recessive isolated optic atrophy in which the cause of the disease is a mutation in the YME1L1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617302","MEDGEN:934595","GARD:18201","DOID:0111436","UMLS:C4310628"],"synonyms":[{"name":"OPA11","type":"exact"},{"name":"YME1L1 autosomal recessive isolated optic atrophy","type":"exact"},{"name":"autosomal recessive isolated optic atrophy caused by mutation in YME1L1","type":"exact"},{"name":"optic atrophy 11","type":"exact"},{"name":"optic atrophy type 11","type":"exact"}],"termid":"MONDO:0015011","terms_by_termid":{"MONDO:0015011":null},"xrefs":{"Monarch":{"xref_id":"0015011"}}}


id: MOD:00919
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-tyrosine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-tyrosine residue","synonyms":[{"name":"ModTyr","type":"exact"}],"termid":"MOD:00919"}


id: PBO:0052956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KXD1 antisense RNA 1","termid":"PBO:0052956"}


id: FYPO:0001281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to hydrogen peroxide","synonyms":[{"name":"normal protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0001281"}


id: MONDO:0017124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noma is a gangrenous disease that causes severe destruction of the soft and osseous tissues of the face.","definition_xrefs":["Orphanet:2700"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"canker sore","termid":"MONDO:0005318"},{"relation_name":"is_a","term_name":"ulcerative stomatitis","termid":"MONDO:0004848"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noma","secondary_identifiers":["GARD:4001","SCTID:18116006","MedDRA:10029502","MEDGEN:10366","UMLS:C0028271","NCIT:C34852","ICD9:528.1","DOID:9672","EFO:1001063","ICD10CM:A69.0","icd11.foundation:340823130","MESH:D009625"],"synonyms":[{"name":"cancrum oris","type":"exact"},{"name":"gangrenous stomatitis","type":"exact"},{"name":"noma neonatorum","type":"related"},{"name":"oral gangrene","type":"related"},{"name":"oro-facial gangrene","type":"related"},{"name":"oro-facial noma","type":"related"}],"termid":"MONDO:0017124","xrefs":{"Monarch":{"xref_id":"0017124"}}}


id: PBO:0070178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 93 pseudogene","termid":"PBO:0070178"}


id: GO:1902001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fatty acid is transported across a membrane.","definition_xrefs":["PMID:9395310","GOC:rb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transport","termid":"GO:0015908"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fatty acid transmembrane transport","termid":"GO:1902001"}


id: FYECO:0000258
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arsenate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arsenate","termid":"FYECO:0000258"}


id: MONDO:0012709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the SHH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 5","secondary_identifiers":["MESH:C566899","UMLS:C1968843","MEDGEN:369356","OMIM:611638","GARD:15524"],"synonyms":[{"name":"MCOPCB5","type":"related"},{"name":"SHH microphthalmia, isolated, with coloboma","type":"exact"},{"name":"Shh microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia with coloboma 5","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 5","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in SHH","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in Shh","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 5","type":"exact"}],"termid":"MONDO:0012709","xrefs":{"Monarch":{"xref_id":"0012709"}}}


id: GO:0033447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"AGA codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033447"}


id: GO:0045227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"capsule polysaccharide biosynthetic process","synonyms":[{"name":"capsular polysaccharide biosynthesis","type":"exact"},{"name":"capsular polysaccharide biosynthetic process","type":"exact"},{"name":"capsule polysaccharide anabolism","type":"exact"},{"name":"capsule polysaccharide biosynthesis","type":"exact"},{"name":"capsule polysaccharide formation","type":"exact"},{"name":"capsule polysaccharide synthesis","type":"exact"}],"termid":"GO:0045227"}


id: MONDO:0004769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonspecific tumor-like inflammatory lesion in the orbit of the eye. It is usually composed of mature lymphocytes; plasma cells; macrophages; leukocytes with varying degrees of fibrosis. Orbital pseudotumors are often associated with inflammation of the extraocular muscles (orbital myositis) or inflammation of the lacrimal glands (dacryoadenitis).","definition_xrefs":["MESH:D016727"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myositis disease","termid":"MONDO:0021167"},{"relation_name":"is_a","term_name":"chronic orbital inflammation","termid":"MONDO:0001849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orbital pseudotumor","secondary_identifiers":["DOID:9369","UMLS:C0085270","MEDGEN:43140","SCTID:72789009"],"synonyms":[{"name":"granuloma, plasma cell, orbital","type":"exact"},{"name":"inflammatory pseudotumor of orbit","type":"exact"},{"name":"inflammatory pseudotumor of orbit proper","type":"exact"},{"name":"inflammatory pseudotumor, orbital","type":"exact"},{"name":"inflammatory pseudotumors, orbital","type":"exact"},{"name":"orbital granuloma, plasma cell","type":"exact"},{"name":"orbital inflammatory pseudotumor","type":"exact"},{"name":"orbital inflammatory pseudotumors","type":"exact"},{"name":"orbital myositis","type":"related"},{"name":"orbital plasma cell granuloma","type":"exact"},{"name":"orbital pseudotumors","type":"exact"},{"name":"plasma cell granuloma, orbital","type":"exact"},{"name":"pseudotumor of orbit","type":"exact"},{"name":"pseudotumor, inflammatory, orbital","type":"exact"},{"name":"pseudotumor, orbital","type":"exact"},{"name":"pseudotumor, orbital inflammatory","type":"exact"},{"name":"pseudotumors, orbital","type":"exact"}],"termid":"MONDO:0004769","xrefs":{"Monarch":{"xref_id":"0004769"}}}


id: PBO:0076111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX17 divergent transcript","termid":"PBO:0076111"}


id: MONDO:0009989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete enhanced S-cone syndrome (obsolete MONDO:0009989)","termid":"MONDO:0009989","xrefs":{"Monarch":{"xref_id":"0009989"}}}


id: GO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan or aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD+, or the reduced form, NADH.","definition_xrefs":["PMID:17161604","GOC:imk"],"gene_count":0,"genotype_count":0,"name":"obsolete 'de novo' NAD biosynthetic process (obsolete GO:0034627)","synonyms":[{"name":"de novo NAD biosynthetic process","type":"related"}],"termid":"GO:0034627"}


id: PBO:0053112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 2","termid":"PBO:0053112"}


id: PBO:0046926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 43 member B","termid":"PBO:0046926"}


id: PBO:0017016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster protein (predicted)","termid":"PBO:0017016"}


id: SO:0001747
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence that in the normal state of the chromosome corresponds to an unfolded, un-complexed stretch of double-stranded DNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"open_chromatin_region","synonyms":[{"name":"open chromatin region","type":"exact"}],"termid":"SO:0001747"}


id: PBO:0065914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB guanine nucleotide exchange factor 1","termid":"PBO:0065914"}


id: GO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates thiamine biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thiamine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100016)","termid":"GO:0100016"}


id: GO:0019093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial RNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA localization","synonyms":[{"name":"establishment and maintenance of mitochondrial RNA localization","type":"exact"},{"name":"mitochondrial RNA localisation","type":"exact"},{"name":"mtRNA localization","type":"exact"}],"termid":"GO:0019093"}


id: MONDO:0015147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other syndrome with lissencephaly as a major feature (obsolete MONDO:0015147)","secondary_identifiers":["icd11.foundation:805385297","Orphanet:102010"],"termid":"MONDO:0015147","xrefs":{"Monarch":{"xref_id":"0015147"}}}


id: GO:0005789
data:
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id: PBO:0000574
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id: GO:1902808
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id: PBO:0120002
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id: PBO:0045965
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id: PBO:0117037
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id: PBO:0113156
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id: GO:0014702
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