# terms

id: GO:0031314
data:
  {"annotated_genes":["SJAG_03563","SJAG_01043","SJAG_00230","SJAG_04000","SJAG_05398","SJAG_03456","SJAG_00933","SJAG_00852","SJAG_01249","SJAG_04642","SJAG_00721","SJAG_00576"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61423,62982,64931,66441,92823,103235,108170,108831,110140,111492],"is_not":false,"summary":null,"term":"GO:0031314"},{"annotations":[102413,105713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099616"}]},"cv_name":"cellular_component","definition":"The component of mitochondrial inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00721":null,"SJAG_00852":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01249":null,"SJAG_03456":null,"SJAG_03563":null,"SJAG_04000":null,"SJAG_04642":null,"SJAG_05398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031314","terms_by_termid":{"GO:0031314":null,"GO:0099616":null}}


id: MONDO:0030019
data:
  {"annotated_genes":["SJAG_03952"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87439],"is_not":false,"summary":null,"term":"MONDO:0030019"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anauxetic dysplasia","termid":"MONDO:0011773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"anauxetic dysplasia 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1718444","UMLS:C5394289","OMIM:618853","DOID:0080963"],"synonyms":[{"name":"ANAUXETIC DYSPLASIA 3","type":"exact"},{"name":"ANXD3","type":"exact"},{"name":"anauxetic dysplasia 3","type":"exact"}],"termid":"MONDO:0030019","terms_by_termid":{"MONDO:0030019":null},"xrefs":{"Monarch":{"xref_id":"0030019"}}}


id: GO:0080130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + 2-oxoglutarate = 3-phenylpyruvate + L-glutamate.","definition_xrefs":["PMID:18394996","RHEA:25152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-amino-acid transaminase activity","termid":"GO:0008793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"L-phenylalanine-2-oxoglutarate transaminase activity","secondary_identifiers":["MetaCyc:RXN-10814","KEGG_REACTION:R00694"],"synonyms":[{"name":"L-phenylalanine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"L-phenylalanine:alpha-ketoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0080130"}


id: MONDO:0020696
data:
  {"annotated_genes":["SJAG_04459","SJAG_04425","SJAG_01199","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87165,87164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"A disease characterized by low serum levels of vitamin B12, either inherited or acquired.","definition_xrefs":["PMID:16846473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"vitamin B deficiency","termid":"MONDO:0042976"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01199":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin B12 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:21880","NCIT:C131684","SCTID:190634004","MESH:D014806","UMLS:C0042847","EFO:0000734","HP:0100502","ICD9:266.2","icd11.foundation:1366882206"],"synonyms":[{"name":"cobalamin deficiency","type":"exact"},{"name":"hypocobalaminemia","type":"exact"},{"name":"vitamin b12 deficiency","type":"exact"}],"termid":"MONDO:0020696","terms_by_termid":{"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0020696"}}}


id: SO:1000140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A compound chromosome whereby two arms from different chromosomes are connected through the centromere of one of them.","definition_xrefs":["FB:reference_manual","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound_chromosome","termid":"SO:1000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hetero_compound_chromosome","synonyms":[{"name":"hetero compound chromosome","type":"exact"},{"name":"hetero-compound chromosome","type":"exact"}],"termid":"SO:1000140"}


id: GO:0034795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyclohexane + O2 + NAD(P)H + H+ = cyclohexanol + NAD(P)+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1059"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclohexane monooxygenase activity (obsolete GO:0034795)","synonyms":[{"name":"butane monooxygenase activity","type":"related"},{"name":"cyclohexane hydroxylase activity","type":"exact"}],"termid":"GO:0034795"}


id: GO:0061959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an (R)-carnitine stimulus.","definition_xrefs":["PMID:28102299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to (R)-carnitine","synonyms":[{"name":"response to L-carnitine","type":"exact"}],"termid":"GO:0061959"}


id: MONDO:0700114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vector-borne disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vector-borne disease, non-human animal","termid":"MONDO:0700114","xrefs":{"Monarch":{"xref_id":"0700114"}}}


id: PBO:0056765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 16, N6-methyladenosine","termid":"PBO:0056765"}


id: FYPO:0008118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome is decreased for specific introns with longer than average (>21 bp) branch site to acceptor distance.","definition_xrefs":["PMID:36095128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"decreased splicing of introns with branch point-distant 3’-splice site","synonyms":[{"name":"Inefficient excision of introns with branch point (BP)-distant 3’-splice site (ss)","type":"exact"}],"termid":"FYPO:0008118"}


id: PBO:0085857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0085857"}


id: GO:0141199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of GDP-mannose from glucose.","definition_xrefs":["PMID:21273394","PMID:9287314"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP-mannose biosynthetic process from glucose (obsolete GO:0141199)","termid":"GO:0141199"}


id: PBO:0045380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 pseudogene 1","termid":"PBO:0045380"}


id: GO:0031820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y11 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"P2Y11 nucleotide receptor binding","synonyms":[{"name":"P2Y11 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031820"}


id: PBO:0055208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2633","termid":"PBO:0055208"}


id: FYPO:0002609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal at centromeric outer repeat regions. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H2A phosphorylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H2A phosphorylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H2A phosphorylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H2A phosphorylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H2A phosphorylation at pericentromeric region during vegetative growth","type":"related"},{"name":"reduced histone H2A phosphorylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002609"}


id: PBO:0030631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sucrose_carbon_source","termid":"PBO:0030631"}


id: MONDO:0971005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II deficiency","termid":"MONDO:0008855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class II deficiency 1","secondary_identifiers":["OMIM:209920"],"termid":"MONDO:0971005","xrefs":{"Monarch":{"xref_id":"0971005"}}}


id: GO:0044421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular region part (obsolete GO:0044421)","synonyms":[{"name":"extracellular structure","type":"related"}],"termid":"GO:0044421"}


id: PBO:0052034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional sarcoplasmic reticulum protein 1","termid":"PBO:0052034"}


id: GO:1905201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of gibberellin from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GO_REF:0000070","PMID:27139299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"gibberellin transmembrane transporter activity","termid":"GO:1905201"}


id: PBO:0004184
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exchange Factor Cdc25-like","termid":"PBO:0004184"}


id: PBO:0043713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 1","termid":"PBO:0043713"}


id: GO:0090265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the process of immune complex clearance by monocytes or macrophages.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of immune complex clearance by monocytes and macrophages","termid":"GO:0090264"},{"relation_name":"positively_regulates","term_name":"immune complex clearance by monocytes and macrophages","termid":"GO:0002436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune complex clearance by monocytes and macrophages","termid":"GO:0090265"}


id: FYPO:0002310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GMP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal GMP binding","termid":"FYPO:0002310"}


id: GO:0016566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that stops or downregulates transcription of specific genes or sets of genes.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete specific transcriptional repressor activity (obsolete GO:0016566)","synonyms":[{"name":"specific transcriptional repressor activity","type":"exact"}],"termid":"GO:0016566"}


id: GO:1902009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of toxin transport.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:22792315"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of toxin transport (obsolete GO:1902009)","synonyms":[{"name":"activation of toxin transport","type":"narrow"},{"name":"up regulation of toxin transport","type":"exact"},{"name":"up-regulation of toxin transport","type":"exact"},{"name":"upregulation of toxin transport","type":"exact"}],"termid":"GO:1902009"}


id: PBO:0091464
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChiTinaSe 2","termid":"PBO:0091464"}


id: GO:0052672
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2E,6E,10E)-geranylgeraniol + CTP = (2E,6E,10E)-geranylgeranyl phosphate + CDP + H+.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete CTP:geranylgeraniol kinase activity (obsolete GO:0052672)","synonyms":[{"name":"CTP:geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052672"}


id: PBO:0040676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR1 pseudogene 1","termid":"PBO:0040676"}


id: SO:0000862
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is capped.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"adjacent_to","term_name":"cap","termid":"SO:0000581"},{"relation_name":"has_quality","term_name":"capped","termid":"SO:0000146"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capped_mRNA","synonyms":[{"name":"capped mRNA","type":"exact"}],"termid":"SO:0000862"}


id: PBO:0091328
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Protein Sorting","termid":"PBO:0091328"}


id: GO:0090327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.","definition_xrefs":["GOC:kmv","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of locomotion involved in locomotory behavior","termid":"GO:0090325"},{"relation_name":"negatively_regulates","term_name":"locomotion involved in locomotory behavior","termid":"GO:0031987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of locomotion involved in locomotory behavior","termid":"GO:0090327"}


id: PBO:0061883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPA1 mitochondrial dynamin like GTPase","termid":"PBO:0061883"}


id: GO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + H2O + NAD+ = pyruvate + NH3 + NADH + H+.","definition_xrefs":["EC:1.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alanine dehydrogenase activity","secondary_identifiers":["MetaCyc:ALANINE-DEHYDROGENASE-RXN","RHEA:18405"],"synonyms":[{"name":"AlaDH","type":"related"},{"name":"L-alanine dehydrogenase activity","type":"related"},{"name":"L-alanine:NAD+ oxidoreductase (deaminating)","type":"related"},{"name":"NAD-dependent alanine dehydrogenase activity","type":"related"},{"name":"NAD-linked alanine dehydrogenase activity","type":"related"},{"name":"NADH-dependent alanine dehydrogenase activity","type":"related"},{"name":"alanine oxidoreductase activity","type":"related"},{"name":"alpha-alanine dehydrogenase activity","type":"related"}],"termid":"GO:0000286"}


id: PBO:0076494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARS1 divergent transcript","termid":"PBO:0076494"}


id: GO:0043157
data:
  {"annotated_genes":["SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.","definition_xrefs":["GOC:jl","PMID:14762213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cation stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043157","terms_by_termid":{"GO:0071473":null}}


id: PR:O13864
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An importin subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10527:SF1","OMA:SCHPO01479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit beta-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B1.03c","secondary_identifiers":["UniProtKB:O13864"],"synonyms":[{"name":"Spom972h-KPNB1","type":"exact"},{"name":"importin-95 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit beta-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin-95 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13864"}


id: PBO:0049808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 2","termid":"PBO:0049808"}


id: FYPO:0003589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the increase in small deletions or duplications (\\\"replication slippage\\\") that normally results from processing arrested replication forks is diminished or abolished.","definition_xrefs":["PMID:23093942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased replication slippage during replication fork processing","synonyms":[{"name":"decreased replication slippage during replication fork processing during mitotic cell cycle","type":"related"},{"name":"decreased replication slippage during replication fork processing during vegetative growth","type":"exact"},{"name":"reduced replication slippage during replication fork processing","type":"exact"}],"termid":"FYPO:0003589"}


id: GO:0033678
data:
  {"annotated_genes":["SJAG_03780","SJAG_02242"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101843,114520],"is_not":false,"summary":null,"term":"GO:0033678"}]},"cv_name":"molecular_function","definition":"Unwinding of a DNA/RNA duplex in the 5' to 3' direction, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA/RNA helicase activity","termid":"GO:0033677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016853","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"5'-3' DNA/RNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033682","Reactome:R-HSA-163120"],"synonyms":[{"name":"5' to 3' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 5' to 3' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 5'-3' DNA/RNA helicase activity","type":"exact"}],"termid":"GO:0033678","terms_by_termid":{"GO:0033678":null}}


id: FYPO:0002438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin cables that are shorter than normal and abnormally oriented within the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"short actin cables","termid":"FYPO:0002434"},{"relation_name":"has_part","term_name":"misoriented actin cables","termid":"FYPO:0002436"},{"relation_name":"is_a","term_name":"short actin cables","termid":"FYPO:0002434"},{"relation_name":"is_a","term_name":"misoriented actin cables","termid":"FYPO:0002436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"short, misoriented actin cables","synonyms":[{"name":"short, abnormally oriented actin cables","type":"exact"},{"name":"short, misoriented actin cables during mitotic cell cycle","type":"related"},{"name":"short, misoriented actin cables during vegetative growth","type":"exact"},{"name":"short, misoriented formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0002438"}


id: GO:0004883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A nuclear receptor activity regulated by glucocorticoid binding and modulating the transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["GOC:signaling","PMID:17689856","PMID:20920967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear steroid receptor activity","termid":"GO:0003707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003700","GO:0003674","GO:0140110","GO:0038023"],"is_obsolete":false,"name":"nuclear glucocorticoid receptor activity","synonyms":[{"name":"glucocorticoid receptor activity","type":"broad"}],"termid":"GO:0004883"}


id: PBO:0078456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 8","termid":"PBO:0078456"}


id: PATO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000116 relative temperature sensitivity (obsolete PATO:0000116)","termid":"PATO:0000116"}


id: MONDO:0003249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal malignant growth of the cells that comprise the pineal parenchyma.","definition_xrefs":["NCIT:C3573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thalamic cancer","termid":"MONDO:0003766"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"},{"relation_name":"is_a","term_name":"pineal body neoplasm","termid":"MONDO:0021232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal gland cancer","secondary_identifiers":["UMLS:C0153655","DOID:5032","MEDGEN:102284","NCIT:C6965","ICD10CM:C75.3","ICD9:194.4","SCTID:363483004"],"synonyms":[{"name":"cancer of pineal body","type":"exact"},{"name":"malignant neoplasm of pineal body","type":"exact"},{"name":"malignant neoplasm of pineal gland","type":"exact"},{"name":"malignant neoplasm of the pineal gland","type":"exact"},{"name":"malignant pineal area neoplasm","type":"exact"},{"name":"malignant pineal area tumor","type":"exact"},{"name":"malignant pineal area tumour","type":"exact"},{"name":"malignant pineal body neoplasm","type":"exact"},{"name":"malignant pineal gland neoplasm","type":"exact"},{"name":"malignant pineal gland tumor","type":"exact"},{"name":"malignant pineal gland tumour","type":"exact"},{"name":"malignant pineal region neoplasm","type":"exact"},{"name":"malignant pineal region tumor","type":"exact"},{"name":"malignant pineal region tumour","type":"exact"},{"name":"malignant tumor of pineal gland","type":"exact"},{"name":"malignant tumor of the pineal gland","type":"exact"},{"name":"malignant tumour of pineal gland","type":"exact"},{"name":"malignant tumour of the pineal gland","type":"exact"},{"name":"neoplasm of the pineal region","type":"broad"},{"name":"pineal body cancer","type":"exact"},{"name":"pinealoma","type":"related"},{"name":"pineocytic tumor","type":"broad"},{"name":"pineocytic tumour","type":"broad"},{"name":"tumor of the pineal region","type":"broad"},{"name":"tumour of the pineal region","type":"broad"}],"termid":"MONDO:0003249","xrefs":{"Monarch":{"xref_id":"0003249"}}}


id: PBO:0028489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_index","termid":"PBO:0028489"}


id: MONDO:0006689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete carcinoid syndrome (obsolete MONDO:0006689)","secondary_identifiers":["NANDO:2200396"],"termid":"MONDO:0006689","xrefs":{"Monarch":{"xref_id":"0006689"}}}


id: PBO:0027937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_oxygen_consumption_during_vegetative_growth","termid":"PBO:0027937"}


id: PR:O59786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ferrochelatase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11108:SF0","OMA:SCHPO04207","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.09","secondary_identifiers":["UniProtKB:O59786"],"synonyms":[{"name":"Spom972h-FECH","type":"exact"},{"name":"heme synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protoheme ferro-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59786"}


id: PBO:0070397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RORB antisense RNA 1","termid":"PBO:0070397"}


id: GO:0009808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lignins, a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:lr","GOC:yl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignin metabolic process","synonyms":[{"name":"lignin metabolism","type":"exact"}],"termid":"GO:0009808"}


id: MONDO:0009297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Renal Glucosuria (FRG) is characterized by the presence of persistent isolated glucosuria in the absence of both generalized proximal tubular dysfunction and hyperglycemia. FRG is usually considered a benign entity as most patients are not affected by severe clinical consequences. Polyuria and enuresis and later a mild growth and pubertal maturation delay are the only manifestations that have been reported during a follow-up period of 30 years. Episodic dehydration and ketosis during pregnancy and starvation and an increased incidence of urinary tract infections have occasionally been reported in severe cases. FRG is caused by loss-of-function mutations in the gene SLC5A2 (16p11.2).","definition_xrefs":["Orphanet:69076"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"glucose transport disorder","termid":"MONDO:0019226"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"familial renal glucosuria","secondary_identifiers":["DOID:9432","GARD:7548","MedDRA:10038457","NORD:1658","icd11.foundation:381783069","DOID:0070613","OMIM:233100","ICD9:271.4","SCTID:267430007","MEDGEN:757652","MESH:D006030","UMLS:C3245525"],"synonyms":[{"name":"GLYS","type":"related"},{"name":"Glys1","type":"related"},{"name":"Renal Glycosuria","type":"exact"},{"name":"SGLT2 deficiency","type":"exact"},{"name":"familial renal glucosuria","type":"exact"},{"name":"glycosuria, renal","type":"related"},{"name":"renal diabetes","type":"exact"},{"name":"renal glucosuria","type":"related"},{"name":"renal glycosuria","type":"related"}],"termid":"MONDO:0009297","xrefs":{"Monarch":{"xref_id":"0009297"}}}


id: PBO:0031231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylation","termid":"PBO:0031231"}


id: GO:1990796
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the axon terminus portion of a photoreceptor cell axon. A photoreceptor cell is a neuron specialized to detect and transduce light.","definition_xrefs":["PMID:19883736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor cell terminal bouton","termid":"GO:1990796"}


id: MONDO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Otitis media associated with accumulation of fluid in the middle ear.","definition_xrefs":["NCIT:C34886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic non-suppurative otitis media","termid":"MONDO:0021206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otitis media with effusion","secondary_identifiers":["MESH:D010034","ICD9:381.20","MEDGEN:629314","UMLS:C0456498","EFO:0007415","SCTID:78868004","ICD9:381.29"],"synonyms":[{"name":"OME","type":"exact"},{"name":"secretory otitis Media","type":"exact"},{"name":"serous otitis Media","type":"exact"}],"termid":"MONDO:0005892","xrefs":{"Monarch":{"xref_id":"0005892"}}}


id: PBO:0076624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor E like","termid":"PBO:0076624"}


id: PBO:0017715
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF9","termid":"PBO:0017715"}


id: MONDO:0027694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 23","secondary_identifiers":["OMIM:617839","DOID:0080225","UMLS:C4693381","GARD:16262","MEDGEN:1645924"],"synonyms":[{"name":"ALS23","type":"exact"},{"name":"amyotrophic lateral sclerosis 23","type":"related"}],"termid":"MONDO:0027694","xrefs":{"Monarch":{"xref_id":"0027694"}}}


id: GO:0043978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an acetyl group to a lysine residue at position 9 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K9 acetylation (obsolete GO:0043978)","synonyms":[{"name":"histone H2A acetylation at K9","type":"exact"}],"termid":"GO:0043978"}


id: GO:0019554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including oxaloacetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate metabolic process","termid":"GO:0006107"},{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"glutamate catabolic process to oxaloacetate","synonyms":[{"name":"glutamate breakdown to oxaloacetate","type":"exact"},{"name":"glutamate degradation to oxaloacetate","type":"exact"}],"termid":"GO:0019554"}


id: GO:0007175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor-activated receptor activity","termid":"GO:0007176"},{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"},{"relation_name":"is_a","term_name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor-activated receptor activity","secondary_identifiers":["GO:0007177"],"synonyms":[{"name":"EGF receptor downregulation","type":"exact"},{"name":"down regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"downregulation of epidermal growth factor receptor activity","type":"exact"},{"name":"inhibition of epidermal growth factor receptor activity","type":"narrow"},{"name":"negative regulation of EGF receptor activity","type":"exact"},{"name":"negative regulation of EGFR activity","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0007175"}


id: GO:0030328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenylcysteine, 3-methyl-2-buten-1-yl-cysteine, a derivative of the amino acid cysteine formed by the covalent addition of a prenyl residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylcysteine catabolic process","synonyms":[{"name":"prenylcysteine breakdown","type":"exact"},{"name":"prenylcysteine catabolism","type":"exact"},{"name":"prenylcysteine degradation","type":"exact"}],"termid":"GO:0030328"}


id: MONDO:0022560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder that affects women with a history of uterine leiomyoma, which is found to metastasise within extrauterine sites.The disease develops as a proliferation of multiple nodules composed of smooth muscle cells.The most frequent site of metastasis is the lungs, although other areas may also be affected as well, including some atypical locations, e.g. the heart or spinal cord.","definition_xrefs":["PMID:28426767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign metastasizing leiomyoma","secondary_identifiers":["MEDGEN:307261","UMLS:C1511090"],"termid":"MONDO:0022560","xrefs":{"Monarch":{"xref_id":"0022560"}}}


id: MONDO:0045013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the extraembryonic membrane.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of extraembryonic membrane","secondary_identifiers":["SCTID:609522002","MEDGEN:783294","UMLS:C3662139"],"synonyms":[{"name":"disease of extraembryonic membrane","type":"exact"},{"name":"disease or disorder of extraembryonic membrane","type":"exact"},{"name":"disorder of extraembryonic membrane","type":"exact"},{"name":"extraembryonic membrane disease","type":"exact"},{"name":"extraembryonic membrane disease or disorder","type":"exact"}],"termid":"MONDO:0045013","xrefs":{"Monarch":{"xref_id":"0045013"}}}


id: FYPO:0003362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein acetylation is normal (i.e. indistinguishable from wild type). Protein acetylation is the addition of an acetyl group to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0006473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein acetylation during vegetative growth","synonyms":[{"name":"normal protein acetylation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003362"}


id: GO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which phosphoglycerate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"phosphoglycerate transmembrane transport","synonyms":[{"name":"phosphoglycerate transport","type":"related"}],"termid":"GO:0015713"}


id: MONDO:0014072
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87065],"is_not":false,"summary":null,"term":"MONDO:0014072"}]},"cv_name":"mondo","definition":"D,L-2-hydroxyglutaric aciduria is a rare inborn error of metabolism characterized by severe neonatal epileptic encephalopathy, episodes of apnea and respiratory distress, severe global developmental delay or absent psychomotor development, severe muscular hypotonia or absent voluntary movements, feeding difficulties and failure to thrive, absence of visual contact, abnormal brain morphology (including cerebral atrophy, ventriculomegaly and hypoplasia or dysplasia of the corpus callosum), mild dysmorphic features (frontal bossing, hypertelorism, downslanting palpebral fissures, flat nasal bridge), elevated CSF and plasma lactate and urinary Krebs cycle metabolites.","definition_xrefs":["Orphanet:356978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyglutaric aciduria","termid":"MONDO:0016001"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"D,L-2-hydroxyglutaric aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615182","DOID:0111619","SCTID:713401006","UMLS:C5574940","MEDGEN:1802316","ICD9:270.8","GARD:17540"],"synonyms":[{"name":"D,L-2-HGA","type":"exact"},{"name":"D,L-2-hydroxyglutaric acidemia","type":"exact"},{"name":"D,L-2-hydroxyglutaric aciduria","type":"exact"},{"name":"D2L2AD","type":"related"},{"name":"combined D-2- and L-2-hydroxyglutaric aciduria","type":"related"},{"name":"combined D-2-hydroxyglutaric acidemia and L-2-hydroxyglutaric acidemia","type":"exact"},{"name":"combined D-2-hydroxyglutaric aciduria and L-2-hydroxyglutaric aciduria","type":"exact"}],"termid":"MONDO:0014072","terms_by_termid":{"MONDO:0014072":null},"xrefs":{"Monarch":{"xref_id":"0014072"}}}


id: GO:0018949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving m-xylene, (1,3-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete m-xylene metabolic process (obsolete GO:0018949)","synonyms":[{"name":"m-xylene metabolism","type":"exact"},{"name":"meta-xylene metabolic process","type":"exact"},{"name":"meta-xylene metabolism","type":"exact"}],"termid":"GO:0018949"}


id: PBO:0086949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family nucleolar DNA helicase; role in genome integrity maintenance, chromosome synapsis, meiotic joint molecule/crossover formation; stimulates activity of Top3p; rapidly lost in response to rapamycin in Rrd1p-dependent manner; forms nuclear foci upon DNA replication stress; yeast SGS1 complements mutations in human homolog BLM implicated in Bloom syndrome; also similar to human WRN implicated in Werner syndrome; human BLM and WRN can each complement yeast null mutant","termid":"PBO:0086949"}


id: GO:1904173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone demethylase activity (H3-K4 specific).","definition_xrefs":["GOC:dph","PMID:24843136","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone demethylase activity (H3-K4 specific) (obsolete GO:1904173)","termid":"GO:1904173"}


id: MONDO:1010574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, dog","secondary_identifiers":["OMIA:000279-9615"],"termid":"MONDO:1010574","xrefs":{"Monarch":{"xref_id":"1010574"}}}


id: MONDO:0008372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"retinal aplasia","secondary_identifiers":["MEDGEN:356752","GARD:15109","MESH:C566720","OMIM:179900","UMLS:C1867331"],"synonyms":[{"name":"amaurosis congenita","type":"related"},{"name":"retinal aplasia","type":"exact"}],"termid":"MONDO:0008372","xrefs":{"Monarch":{"xref_id":"0008372"}}}


id: PBO:0001240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bos1 (predicted)","termid":"PBO:0001240"}


id: MONDO:0000441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked myopathy with excessive autophagy (obsolete MONDO:0000441)","termid":"MONDO:0000441","xrefs":{"Monarch":{"xref_id":"0000441"}}}


id: MONDO:0044212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of idiopathic urticaria.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic urticaria","termid":"MONDO:0044211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chronic idiopathic urticaria","secondary_identifiers":["SCTID:302162004","UMLS:C0578870","MEDGEN:662267","DOID:0080749"],"synonyms":[{"name":"chronic idiopathic urticaria","type":"exact"},{"name":"chronic spontaneous urticaria","type":"exact"},{"name":"idiopathic urticaria, chronic","type":"exact"}],"termid":"MONDO:0044212","xrefs":{"Monarch":{"xref_id":"0044212"}}}


id: MONDO:0007804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pallister-Hall syndrome (PHS), a pleiotropic autosomal dominant malformative disorder, is characterized by hypothalamic hamartoma, pituitary dysfunction, bifid epiglottis, polydactyly, and, more rarely, renal abnormalities and genitourinary malformations.","definition_xrefs":["Orphanet:672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pallister-Hall syndrome","secondary_identifiers":["MESH:D054975","ICD9:759.89","MEDGEN:120514","OMIM:146510","UMLS:C0265220","SCTID:56677004","DOID:9248","icd11.foundation:1845613381","GARD:7305","NCIT:C84987","NORD:1545"],"synonyms":[{"name":"PHS","type":"exact"},{"name":"Pallister Hall syndrome","type":"exact"},{"name":"Pallister-Hall syndrome","type":"exact"},{"name":"ano-cerebro-digital syndrome","type":"exact"},{"name":"hypothalamic hamartoblastoma syndrome","type":"exact"},{"name":"hypothalamic hamartoblastoma, hypopituitarism, imperforate anus, and postaxial polydactyly","type":"exact"}],"termid":"MONDO:0007804","xrefs":{"Monarch":{"xref_id":"0007804"}}}


id: PBO:0004608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 RBBP6 family involved in mRNA cleavage (predicted)","termid":"PBO:0004608"}


id: PBO:0038670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 4","termid":"PBO:0038670"}


id: PR:O13861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tcd1 gene.","definition_xrefs":["UniProtKB:O13861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.10","synonyms":[{"name":"Spom972h-tcd1","type":"exact"},{"name":"t(6)A37 dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13861"}


id: PBO:0025486
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCID","termid":"PBO:0025486"}


id: MONDO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the thymus. Representative examples include mediastinal (thymic) large B-cell lymphoma and Hodgkin lymphoma.","definition_xrefs":["NCIT:C6451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymus cancer","termid":"MONDO:0002586"},{"relation_name":"is_a","term_name":"mediastinal malignant lymphoma","termid":"MONDO:0004021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"thymus lymphoma","secondary_identifiers":["EFO:1000054","MEDGEN:277818","UMLS:C1336745","DOID:10146"],"synonyms":[{"name":"Thymus lymphoma","type":"exact"},{"name":"lymphoma of Thymus","type":"exact"},{"name":"lymphoma of the Thymus","type":"exact"},{"name":"lymphoma of thymus","type":"exact"},{"name":"primary thymic lymphoma","type":"exact"},{"name":"thymic lymphoma","type":"exact"},{"name":"thymus lymphoma","type":"exact"}],"termid":"MONDO:0000951","xrefs":{"Monarch":{"xref_id":"0000951"}}}


id: PBO:0058739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6863","termid":"PBO:0058739"}


id: PR:O74963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nca2 gene.","definition_xrefs":["UniProtKB:O74963","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear control of ATPase protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.02c","synonyms":[{"name":"Spom972h-nca2","type":"exact"}],"termid":"PR:O74963"}


id: FYPO:0005291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during cellular response to zinc ion","synonyms":[{"name":"increased RNA accumulation during cellular response to zinc ion","type":"related"},{"name":"increased RNA level during cellular response to excess zinc ions","type":"narrow"},{"name":"increased RNA level during cellular response to zinc","type":"exact"},{"name":"increased RNA level during cellular response to zinc ion during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to zinc ion","type":"narrow"},{"name":"increased transcript level during cellular response to zinc ion","type":"exact"}],"termid":"FYPO:0005291"}


id: PBO:0049844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 5B","termid":"PBO:0049844"}


id: PBO:0079393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 4B class IVb","termid":"PBO:0079393"}


id: PBO:0043953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta-gamma domain containing 1","termid":"PBO:0043953"}


id: GO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to protozoan","secondary_identifiers":["GO:0042833"],"synonyms":[{"name":"resistance to pathogenic protozoa","type":"related"},{"name":"response to protozoa","type":"exact"},{"name":"response to protozoon","type":"exact"}],"termid":"GO:0001562"}


id: GO:0015660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of formate from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate transmembrane transporter activity","termid":"GO:0015499"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"formate efflux transmembrane transporter activity","secondary_identifiers":["GO:0015509"],"synonyms":[{"name":"formate efflux permease activity","type":"related"}],"termid":"GO:0015660"}


id: PBO:0077371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 109","termid":"PBO:0077371"}


id: PBO:0064220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 1","termid":"PBO:0064220"}


id: GO:0019536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vibriobactin, the major siderophore produced by Vibrio cholerae.","definition_xrefs":["GOC:jl","PMID:11112537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"vibriobactin metabolic process","synonyms":[{"name":"vibriobactin metabolism","type":"exact"}],"termid":"GO:0019536"}


id: PBO:0056166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 2 like 1 pseudogene 1","termid":"PBO:0056166"}


id: MONDO:0958196
data:
  {"annotated_genes":["SJAG_03406","SJAG_02782"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88287,88288],"is_not":false,"summary":null,"term":"MONDO:0958196"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, early-onset","termid":"MONDO:0957599"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02782":null,"SJAG_03406":null},"genotype_count":0,"is_obsolete":false,"name":"epilepsy, early-onset, 3, with or without developmental delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070472","OMIM:620465","MEDGEN:1847911","UMLS:C5882674"],"termid":"MONDO:0958196","terms_by_termid":{"MONDO:0958196":null},"xrefs":{"Monarch":{"xref_id":"0958196"}}}


id: MONDO:0030071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa 89","secondary_identifiers":["OMIM:618955","DOID:0112146","UMLS:C5394552","MEDGEN:1710499"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 89","type":"exact"},{"name":"RP89","type":"exact"},{"name":"retinitis pigmentosa 89","type":"exact"}],"termid":"MONDO:0030071","xrefs":{"Monarch":{"xref_id":"0030071"}}}


id: GO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function.","definition_xrefs":["GOC:add","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure homeostasis","termid":"GO:0060249"},{"relation_name":"part_of","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue homeostasis","synonyms":[{"name":"tissue maintenance","type":"narrow"}],"termid":"GO:0001894"}


id: PBO:0052944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated like protein 29-1","termid":"PBO:0052944"}


id: GO:0000949
data:
  {"annotated_genes":["SJAG_04842","SJAG_02734","SJAG_03743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73065,73388,75768],"is_not":false,"summary":null,"term":"GO:0000949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of aromatic amino acids to produce aromatic alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When an aromatic family amino acid, phenylalanine, tyrosine, or tryptophan, is used as the substrate, 2-phenylethanol, 4-hydroxyphenylethanol, or tryptophol, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process to alcohol via Ehrlich pathway","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000949","terms_by_termid":{"GO:0000949":null}}


id: PBO:0026955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_new_growing_cell_tip","termid":"PBO:0026955"}


id: MONDO:0015442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary breast and ovarian cancer syndrome (obsolete MONDO:0015442)","termid":"MONDO:0015442","xrefs":{"Monarch":{"xref_id":"0015442"}}}


id: GO:0140720
data:
  {"annotated_genes":["SJAG_03356","SJAG_00678","SJAG_03945","SJAG_01046","SJAG_03916","SJAG_03042","SJAG_03664","SJAG_03418","SJAG_00302","SJAG_01579","SJAG_00335","SJAG_03982","SJAG_04186","SJAG_02401","SJAG_02778","SJAG_03680","SJAG_02119","SJAG_01601","SJAG_03844","SJAG_00756","SJAG_01540","SJAG_02621","SJAG_04574","SJAG_03997","SJAG_03685","SJAG_03543"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61471,64796,92866,93217,94022,95778,96024,98110,98676,101065,101512,106042,106141,112471,114099,114203,114604,114605,115284,115981,117939,119126,119699,119755,120100,120835],"is_not":false,"summary":null,"term":"GO:0140720"}]},"cv_name":"cellular_component","definition":"Heterochromatin that is located adjacent to the telomere, and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).","definition_xrefs":["PMID:34576871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"},{"relation_name":"part_of","term_name":"chromosome, subtelomeric region","termid":"GO:0099115"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_01046":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02621":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"subtelomeric heterochromatin","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0140720","terms_by_termid":{"GO:0140720":null}}


id: GO:0018894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern.","definition_xrefs":["UM-BBD_pathwayID:dpd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dibenzo-p-dioxin metabolic process","synonyms":[{"name":"dibenzo-p-dioxin metabolism","type":"exact"},{"name":"oxanthrene metabolic process","type":"exact"},{"name":"oxanthrene metabolism","type":"exact"},{"name":"phenodioxin metabolic process","type":"exact"},{"name":"phenodioxin metabolism","type":"exact"}],"termid":"GO:0018894"}


id: FYPO:0006511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells form telomeres that are shorter than normal during G0 phase. Normally, telomere length is stable in G0, whereas telomere sequences can be lost in mutants.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere length","termid":"FYPO:0006509"},{"relation_name":"is_a","term_name":"abnormal telomere morphology during G0","termid":"FYPO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"shortened telomeres during G0","synonyms":[{"name":"decreased telomere length during G0","type":"related"},{"name":"loss of telomeric sequence during G0","type":"exact"},{"name":"loss of telomeric sequence during quiescence","type":"exact"},{"name":"reduced telomere length during G0","type":"exact"},{"name":"short telomeres during G0","type":"exact"},{"name":"shortened telomeres during cell quiescence","type":"exact"},{"name":"shortened telomeres during quiescence","type":"exact"}],"termid":"FYPO:0006511"}


id: GO:0060584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of prostaglandin-endoperoxide synthase activity (obsolete GO:0060584)","synonyms":[{"name":"regulation of (PG)H synthase activity","type":"related"},{"name":"regulation of PG synthetase activity","type":"related"},{"name":"regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060584"}


id: GO:0052814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty aldehyde + H2O + NAD+ = a medium chain fatty acid + 2 H+ + NADH.","definition_xrefs":["RHEA:69763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty aldehyde dehydrogenase (NAD+) activity","termid":"GO:0102673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"medium-chain fatty aldehyde dehydrogenase (NAD+) activity","synonyms":[{"name":"medium-chain aliphatic aldehyde dehydrogenase activity","type":"related"},{"name":"medium-chain fatty aldehyde dehydrogenase activity","type":"related"},{"name":"medium-chain-aldehyde dehydrogenase activity","type":"exact"},{"name":"medium-chain-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0052814"}


id: MONDO:0021179
data:
  {"annotated_genes":["SJAG_01236","SJAG_02274","SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971004"},{"annotations":[87123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010080"},{"annotations":[88041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"}]},"cv_name":"mondo","definition":"Disorders caused by imbalances in the protein homeostasis network - synthesis, folding, and transport of proteins; post-translational modifications; and degradation or clearance of misfolded proteins.","definition_xrefs":["MESH:D057165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01236":null,"SJAG_02274":null,"SJAG_04300":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"proteostasis deficiencies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:403490","UMLS:C2718000"],"synonyms":[{"name":"Misfolding disease, Protein","type":"narrow"},{"name":"Misfolding diseases, Protein","type":"narrow"},{"name":"Misfolding disorder, Protein","type":"narrow"},{"name":"Misfolding disorders, Protein","type":"narrow"},{"name":"Protein Misfolding disease","type":"narrow"},{"name":"Protein Misfolding diseases","type":"narrow"},{"name":"Protein Misfolding disorder","type":"narrow"},{"name":"Protein Misfolding disorders","type":"narrow"},{"name":"Protein folding disease","type":"narrow"},{"name":"Protein folding diseases","type":"narrow"},{"name":"Protein folding disorder","type":"narrow"},{"name":"Protein folding disorders","type":"narrow"},{"name":"Proteostasis deficiency","type":"exact"},{"name":"Proteostasis dysfunction","type":"exact"},{"name":"Proteostasis dysfunctions","type":"exact"},{"name":"deficiencies, Proteostasis","type":"exact"},{"name":"deficiency, Proteostasis","type":"exact"},{"name":"disease, Protein Misfolding","type":"narrow"},{"name":"disease, Protein folding","type":"narrow"},{"name":"diseases, Protein Misfolding","type":"narrow"},{"name":"diseases, Protein folding","type":"narrow"},{"name":"disorder, Protein Misfolding","type":"narrow"},{"name":"disorder, Protein folding","type":"narrow"},{"name":"disorders, Protein Misfolding","type":"narrow"},{"name":"disorders, Protein folding","type":"narrow"},{"name":"dysfunction, Proteostasis","type":"exact"},{"name":"dysfunctions, Proteostasis","type":"exact"},{"name":"folding disease, Protein","type":"narrow"},{"name":"folding diseases, Protein","type":"narrow"},{"name":"folding disorder, Protein","type":"narrow"},{"name":"folding disorders, Protein","type":"narrow"},{"name":"proteinopathy","type":"related"},{"name":"proteopathic disease","type":"related"},{"name":"proteopathy","type":"related"}],"termid":"MONDO:0021179","terms_by_termid":{"MONDO:0010080":null,"MONDO:0014889":null,"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0021179"}}}


id: PBO:0046256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 5","termid":"PBO:0046256"}


id: MONDO:0013614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism-preauricular sinus-punctual pits-deafness syndrome","secondary_identifiers":["MEDGEN:1659106","OMIM:614187","GARD:17351","UMLS:C4751125","Orphanet:293958"],"synonyms":[{"name":"HPPD","type":"exact"},{"name":"hypertelorism, preauricular sinus, punctal pits, and deafness","type":"related"},{"name":"hypertelorism-preauricular sinus-punctual pits-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0013614","xrefs":{"Monarch":{"xref_id":"0013614"}}}


id: MONDO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the inner ear. The cause is often not clear. It may be due to a virus, but it can also arise from bacterial infection, head injury, extreme stress, an allergy, or as a reaction to medication.","definition_xrefs":["Wikipedia:Labyrinthitis","NCIT:C128369"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infectious otitis interna","termid":"MONDO:0002812"},{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labyrinthitis","secondary_identifiers":["SCTID:23919004","UMLS:C0022893","ICD10CM:H83.0","ICD9:386.3","ICD9:386.30","MEDGEN:5991","MESH:D007762","EFO:0009604","DOID:3930","DOID:1468","icd11.foundation:901550793"],"synonyms":[{"name":"inflammation of internal ear","type":"exact"},{"name":"inner ear infection","type":"related"},{"name":"internal ear inflammation","type":"exact"},{"name":"otitis interna","type":"exact"}],"termid":"MONDO:0002008","xrefs":{"Monarch":{"xref_id":"0002008"}}}


id: PBO:0091998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, quiescence specific","termid":"PBO:0091998"}


id: GO:0047911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->4)-alpha-D-galacturonide](n) + H2O = [(1->4)-alpha-D-galacturonide](n-1) + D-galacturonate.","definition_xrefs":["MetaCyc:GALACTURAN-14-ALPHA-GALACTURONIDASE-RXN","EC:3.2.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"galacturan 1,4-alpha-galacturonidase activity","secondary_identifiers":["RHEA:14117"],"synonyms":[{"name":"exo-D-galacturonanase activity","type":"related"},{"name":"exo-D-galacturonase activity","type":"exact"},{"name":"exo-polygalacturonase activity","type":"exact"},{"name":"exopoly-D-galacturonase activity","type":"exact"},{"name":"exopolygalacturonase activity","type":"related"},{"name":"galacturan alpha-1,4-galacturonidase activity","type":"exact"},{"name":"poly(1,4-alpha-D-galacturonide) galacturonohydrolase activity","type":"related"},{"name":"poly(galacturonate) hydrolase activity","type":"related"}],"termid":"GO:0047911"}


id: MONDO:1012872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary ciliary dyskinesia that occurs in sheep due to a mutation in the CCDC65 gene. Homozygous affected lambs suffer from respiratory defects predisposing infectious pneumonia with a fatal ending at a young age.","definition_xrefs":["PMID:35052387","MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia, non-human animal","termid":"MONDO:1011925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia, CCDC65-related, sheep","secondary_identifiers":["OMIA:002342-9940"],"synonyms":[{"name":"LDHH6","type":"exact"},{"name":"Lacaune deficient homozygous haplotype 6, sheep","type":"related"}],"termid":"MONDO:1012872","xrefs":{"Monarch":{"xref_id":"1012872"}}}


id: GO:0015727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lactate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lactate is 2-hydroxypropanoate, CH3-CHOH-COOH; L(+)-lactate is formed by anaerobic glycolysis in animal tissues, and DL-lactate is found in sour milk, molasses and certain fruit juices.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lactate transport","termid":"GO:0015727"}


id: GO:1901008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (S)-scoulerine.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-scoulerine catabolic process (obsolete GO:1901008)","synonyms":[{"name":"(S)-scoulerine breakdown","type":"exact"},{"name":"(S)-scoulerine catabolism","type":"exact"},{"name":"(S)-scoulerine degradation","type":"exact"}],"termid":"GO:1901008"}


id: PBO:0069895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1186, pseudogene","termid":"PBO:0069895"}


id: MONDO:0011856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia-bowed forearms-facial dysmorphism syndrome","secondary_identifiers":["MESH:C535791","Orphanet:168552","UMLS:C1843706","MEDGEN:375263","OMIM:607543","DOID:0112305","GARD:8719"],"synonyms":[{"name":"SmD with bowed forearms and Facial Dysmorphism","type":"related"},{"name":"SmD with with bowed forearms and facial dysmorphism","type":"related"},{"name":"spondylometaphyseal dysplasia with bowed forearms and facial dysmorphism","type":"related"}],"termid":"MONDO:0011856","xrefs":{"Monarch":{"xref_id":"0011856"}}}


id: PBO:0061996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily F member 1","termid":"PBO:0061996"}


id: GO:0008592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the Tl signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"Toll signaling pathway","termid":"GO:0008063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Toll signaling pathway","synonyms":[{"name":"regulation of Tl signaling pathway","type":"exact"},{"name":"regulation of Tl signalling pathway","type":"exact"},{"name":"regulation of Toll signalling pathway","type":"exact"}],"termid":"GO:0008592"}


id: MONDO:0013982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypohidrotic ectodermal dysplasia","termid":"MONDO:0015884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 11A, hypohidrotic/hair/tooth type, autosomal dominant","secondary_identifiers":["DOID:0111653","OMIM:614940","MEDGEN:762105","UMLS:C3541517","GARD:18592"],"synonyms":[{"name":"ECTD11A","type":"related"},{"name":"ectodermal dysplasia 11A, hypohidrotic/hair/tooth type, autosomal dominant","type":"exact"},{"name":"ectodermal dysplasia, hypohidrotic, autosomal dominant","type":"related"}],"termid":"MONDO:0013982","xrefs":{"Monarch":{"xref_id":"0013982"}}}


id: FYPO:0003924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage measured at arrested replication forks in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage at stalled replication fork","synonyms":[{"name":"increased DNA damage at arrested replication fork","type":"exact"},{"name":"increased DNA damage at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"increased DNA damage at stalled replication fork during vegetative growth","type":"exact"},{"name":"increased number of DNA lesions at stalled replication forks during vegetative growth","type":"related"}],"termid":"FYPO:0003924"}


id: PBO:0091275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartyl/glutamyl-tRNA amidotransferase subunit B-related Aim41","termid":"PBO:0091275"}


id: MONDO:0008892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PFIC1, a type of progressive familial intrahepathic cholestasis (PFIC), is an infantile hereditary disorder in bile formation that is hepatocellular in origin and associated with extrahepatic features.","definition_xrefs":["Orphanet:79306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"progressive familial intrahepatic cholestasis type 1","secondary_identifiers":["DOID:0070226","UMLS:C4551898","MEDGEN:1645830","GARD:9802","icd11.foundation:1414850183","NANDO:1201043","OMIM:211600"],"synonyms":[{"name":"Byler disease","type":"exact"},{"name":"Byler's disease","type":"related"},{"name":"FIC1 deficiency","type":"exact"},{"name":"PFIC1","type":"exact"},{"name":"cholestasis, fatal intrahepatic","type":"related"},{"name":"cholestasis, progressive familial intrahepatic 1","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 1","type":"related"},{"name":"cholestasis, progressive familial intrahepatic, type 1","type":"exact"},{"name":"progressive familial intrahepatic cholestasis","type":"related"},{"name":"severe ATP8B1 deficiency","type":"related"}],"termid":"MONDO:0008892","xrefs":{"Monarch":{"xref_id":"0008892"}}}


id: PBO:0085612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA repair; related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair","termid":"PBO:0085612"}


id: GO:0043560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin receptor substrate (IRS) protein, an adaptor protein that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex.","definition_xrefs":["PMID:12829233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"insulin receptor substrate binding","synonyms":[{"name":"IRS [protein] binding","type":"exact"},{"name":"IRS binding","type":"exact"},{"name":"insulin receptor substrate [protein] binding","type":"exact"}],"termid":"GO:0043560"}


id: GO:0047108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethyl (R)-3-hydroxyhexanoate + NADP+ = ethyl 3-oxohexanoate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.279","RHEA:24352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-3-hydroxyacid-ester dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.55-RXN","KEGG_REACTION:R04105"],"synonyms":[{"name":"(R)-3-hydroxyacid ester dehydrogenase activity","type":"exact"},{"name":"3-oxo ester (R)-reductase activity","type":"related"},{"name":"ethyl-(R)-3-hydroxyhexanoate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047108"}


id: PBO:0091349
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rec12 is released from double-strand breaks covalently bound to oligonucleotides 17-27 nt long","termid":"PBO:0091349"}


id: PBO:0090992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase Spg1/Lcb3","termid":"PBO:0090992"}


id: PBO:0054274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1664","termid":"PBO:0054274"}


id: PBO:0031672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_secretion","termid":"PBO:0031672"}


id: PBO:0017644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex assembly protein Mba1 (predicted)","termid":"PBO:0017644"}


id: PBO:0058919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRlet-7a-1/let-7f-1/let-7d cluster host gene","termid":"PBO:0058919"}


id: GO:1900654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of demethylkotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of demethylkotanin biosynthetic process","termid":"GO:1900652"},{"relation_name":"positively_regulates","term_name":"demethylkotanin biosynthetic process","termid":"GO:1900599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of demethylkotanin biosynthetic process","synonyms":[{"name":"activation of demethylkotanin anabolism","type":"exact"},{"name":"activation of demethylkotanin biosynthesis","type":"exact"},{"name":"activation of demethylkotanin biosynthetic process","type":"narrow"},{"name":"activation of demethylkotanin formation","type":"exact"},{"name":"activation of demethylkotanin synthesis","type":"exact"},{"name":"positive regulation of demethylkotanin anabolism","type":"exact"},{"name":"positive regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"positive regulation of demethylkotanin formation","type":"exact"},{"name":"positive regulation of demethylkotanin synthesis","type":"exact"},{"name":"up regulation of demethylkotanin anabolism","type":"exact"},{"name":"up regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"up regulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"up regulation of demethylkotanin formation","type":"exact"},{"name":"up regulation of demethylkotanin synthesis","type":"exact"},{"name":"up-regulation of demethylkotanin anabolism","type":"exact"},{"name":"up-regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"up-regulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"up-regulation of demethylkotanin formation","type":"exact"},{"name":"up-regulation of demethylkotanin synthesis","type":"exact"},{"name":"upregulation of demethylkotanin anabolism","type":"exact"},{"name":"upregulation of demethylkotanin biosynthesis","type":"exact"},{"name":"upregulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"upregulation of demethylkotanin formation","type":"exact"},{"name":"upregulation of demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900654"}


id: GO:0009632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete freezing tolerance (obsolete GO:0009632)","synonyms":[{"name":"freezing tolerance","type":"exact"}],"termid":"GO:0009632"}


id: GO:0009907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light photoperiod stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm.","definition_xrefs":["GOC:mtg_far_red","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"},{"relation_name":"is_a","term_name":"response to red light","termid":"GO:0010114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to photoperiod, red light","termid":"GO:0009907"}


id: GO:0034438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a lipoprotein by oxidation of one or more amino acids in the protein.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein amino acid oxidation (obsolete GO:0034438)","termid":"GO:0034438"}


id: PBO:0034212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_model","termid":"PBO:0034212"}


id: PBO:0067207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 272, pseudogene","termid":"PBO:0067207"}


id: GO:0019235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a slow pain stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. Slow pain is often subjectively described as an aching or throbbing pain; in humans, the signals from a slow pain stimulus are perceived and relayed along unmyelinated C fibers to the central nervous system, reaching their target in about 1 second. Slow pain is often associated with tissue destruction.","definition_xrefs":["PMID:38704307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of slow pain","termid":"GO:0019235"}


id: GO:0019766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of an IgA isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgA receptor activity","termid":"GO:0019766"}


id: PR:Q9HE04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE04"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.11c","synonyms":[{"name":"Spom972h-rho5","type":"exact"}],"termid":"PR:Q9HE04"}


id: PBO:0070749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 5","termid":"PBO:0070749"}


id: MONDO:0006181
data:
  {"annotated_genes":["SJAG_03453","SJAG_02049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015278"},{"annotations":[88565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"}]},"cv_name":"mondo","definition":"A malignant neoplasm that arises from the epithelium of any part of the digestive system. Representative examples include colorectal carcinoma, esophageal carcinoma, and pancreatic carcinoma.","definition_xrefs":["NCIT:C96963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02049":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"digestive system carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0002672","DOID:0050922","EFO:1000218","MEDGEN:57467","UMLS:C0151544"],"synonyms":[{"name":"carcinoma of digestive system","type":"exact"},{"name":"carcinoma of the gastrointestinal system","type":"exact"},{"name":"digestive system carcinoma","type":"exact"},{"name":"gastrointestinal carcinoma","type":"exact"},{"name":"gastrointestinal carcinoma (disease)","type":"exact"},{"name":"gastrointestinal system carcinoma","type":"exact"}],"termid":"MONDO:0006181","terms_by_termid":{"MONDO:0007256":null,"MONDO:0015278":null},"xrefs":{"Monarch":{"xref_id":"0006181"}}}


id: GO:0018519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydro-3-ethylcatechol + NAD+ = 3-ethylcatechol + H+ + NADH.","definition_xrefs":["EC:1.3.1.66","RHEA:18101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cis-dihydroethylcatechol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.66-RXN","KEGG_REACTION:R05313","UM-BBD_reactionID:r0309"],"synonyms":[{"name":"cis-1,2-dihydro-3-ethylcatechol:NAD+ oxidoreductase activity","type":"related"},{"name":"cis-ethylbenzene glycol dehydrogenase activity","type":"exact"}],"termid":"GO:0018519"}


id: PATO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that exists by virtue of the luminous intensity per unit area projected in a given direction.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Luminance"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luminous flux","termid":"PATO:0001296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luminance","termid":"PATO:0001718"}


id: MONDO:0017066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cervical spina bifida aperta","secondary_identifiers":["icd11.foundation:151252460","MEDGEN:743641","Orphanet:268392","UMLS:C1960883","SCTID:425687007","GARD:20955","ICD9:741.91"],"termid":"MONDO:0017066","xrefs":{"Monarch":{"xref_id":"0017066"}}}


id: PBO:0003789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptide-transporting ATPase","termid":"PBO:0003789"}


id: MONDO:0010860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the MYO15A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 3","secondary_identifiers":["MESH:C563961","DOID:0110488","MEDGEN:325373","GARD:22583","UMLS:C1838263","OMIM:600316"],"synonyms":[{"name":"DFNB3","type":"narrow"},{"name":"MYO15A autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"NRSD3","type":"narrow"},{"name":"autosomal recessive deafness 3, neurosensory nonsyndromic recessive deafness 3","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 3","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MYO15A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 3","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 3","type":"exact"},{"name":"deafness, autosomal recessive 3","type":"narrow"},{"name":"deafness, autosomal recessive type 3","type":"narrow"},{"name":"neurosensory nonsyndromic recessive deafness 3","type":"narrow"}],"termid":"MONDO:0010860","xrefs":{"Monarch":{"xref_id":"0010860"}}}


id: PBO:0073072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 1","termid":"PBO:0073072"}


id: MONDO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 37","secondary_identifiers":["GARD:16440","OMIM:619272","MEDGEN:1783339","UMLS:C5543281"],"synonyms":[{"name":"MC1DN37","type":"exact"},{"name":"mitochondrial complex 1 deficiency, nuclear type 37","type":"exact"},{"name":"mitochondrial complex I deficiency, nuclear type 37","type":"exact"}],"termid":"MONDO:0030997","xrefs":{"Monarch":{"xref_id":"0030997"}}}


id: GO:0047705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin + O2 = 2 biliverdin + 2 H2O.","definition_xrefs":["EC:1.3.3.5","RHEA:20980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"bilirubin oxidase activity","secondary_identifiers":["KEGG_REACTION:R02394","MetaCyc:BILIRUBIN-OXIDASE-RXN"],"synonyms":[{"name":"bilirubin oxidase M-1","type":"related"},{"name":"bilirubin:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047705"}


id: PBO:0003534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit Psf2","termid":"PBO:0003534"}


id: SO:1001286
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding stimulatory signal, downstream sequence important for recoding that contains repetitive elements.","definition_xrefs":["SO:ke","PMID:12519954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_repeat_recoding_signal","synonyms":[{"name":"three prime repeat recoding signal","type":"exact"}],"termid":"SO:1001286"}


id: GO:0120256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an olefinic compound, any compound which contains a carbon-carbon double bond (aka C=C).","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefinic compound catabolic process","synonyms":[{"name":"alkene substituted compound breakdown","type":"exact"},{"name":"alkene substituted compound catabolic process","type":"exact"},{"name":"alkene substituted compound catabolism","type":"exact"},{"name":"alkene substituted compound degradation","type":"exact"}],"termid":"GO:0120256"}


id: GO:0070585
data:
  {"annotated_genes":["SJAG_01879","SJAG_01951","SJAG_02361","SJAG_04218","SJAG_01647","SJAG_02034","SJAG_00564","SJAG_05259","SJAG_00196","SJAG_02524","SJAG_02797","SJAG_01640","SJAG_03560","SJAG_04996","SJAG_04432","SJAG_03415","SJAG_00687","SJAG_01120","SJAG_03135","SJAG_01949","SJAG_01405","SJAG_03502","SJAG_02077","SJAG_01917","SJAG_04336","SJAG_03416","SJAG_01597","SJAG_01615","SJAG_04014","SJAG_02355","SJAG_05300","SJAG_00404","SJAG_03358","SJAG_01442","SJAG_01560","SJAG_03515","SJAG_04208","SJAG_05302","SJAG_03633","SJAG_01684","SJAG_00569","SJAG_00373","SJAG_01780"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99080,100440],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[79583,78961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[109538,92840,104648,105237,107154,90276,108140,96467,113791,117227,91488,109561,111862,101376,98832,102278,109484,119254,112267,101492,101193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[79666,75324,118265,75868,104879,109562,58661,90602,77595],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[76367,80424,80485,80166,58786],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032979"},{"annotations":[112386,112032,100532,100179,71839,59289,78493,113785,109539],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the mitochondrion.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_03135":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_04014":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"protein localisation in mitochondrion","type":"exact"},{"name":"protein localization in mitochondrion","type":"exact"}],"termid":"GO:0070585","terms_by_termid":{"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0160203":null}}


id: PBO:0085392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane Mg(2+) transporter; expression and turnover are regulated by Mg(2+) concentration; overexpression confers increased tolerance to Al(3+) and Ga(3+) ions; magnesium transport defect of the null mutant is functionally complemented by either of the human genes MAGT1 and TUSC3 that are not orthologous to ALR1","termid":"PBO:0085392"}


id: GO:0097083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell regardless of its environment; upon determination, the cell fate cannot be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate determination","termid":"GO:0007521"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate determination","synonyms":[{"name":"vascular smooth muscle cell fate determination","type":"exact"}],"termid":"GO:0097083"}


id: MONDO:0043735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrosis of bone following radiation injury.","definition_xrefs":["MESH:D010025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"},{"relation_name":"is_a","term_name":"radiation-induced disorder","termid":"MONDO:0043459"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoradionecrosis","secondary_identifiers":["MEDGEN:10500","SCTID:109333005","UMLS:C0029461","NCIT:C63707"],"synonyms":[{"name":"Osteoradionecroses","type":"related"},{"name":"osteoradionecrosis","type":"exact"},{"name":"radiation necrosis of bone","type":"related"}],"termid":"MONDO:0043735","xrefs":{"Monarch":{"xref_id":"0043735"}}}


id: PBO:0049831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 2","termid":"PBO:0049831"}


id: FYPO:0003915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the mitochondrion is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"altered level of substance in mitochondrion","termid":"FYPO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial protein level","synonyms":[{"name":"decreased level of mitochondrial proteins","type":"exact"},{"name":"decreased mitochondrial protein level during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in mitochondrion during vegetative growth","type":"exact"},{"name":"reduced mitochondrial protein level","type":"exact"}],"termid":"FYPO:0003915"}


id: PBO:0069941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1234, pseudogene","termid":"PBO:0069941"}


id: FYPO:0005638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic nuclear division results in the connection of a single kinetochore to both spindle poles.","definition_xrefs":["PMID:21920317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore during meiosis I","termid":"FYPO:0000209"},{"relation_name":"is_a","term_name":"merotelic kinetochore attachment","termid":"FYPO:0002651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"merotelic kinetochore attachment during meiosis I","synonyms":[{"name":"merotelic attachment of spindle microtubules to kinetochore during meiosis I","type":"exact"},{"name":"merotelic kinetochore attachment during M phase of meiosis I","type":"exact"},{"name":"merotelic kinetochore attachment during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005638"}


id: MONDO:0032619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 14","secondary_identifiers":["DOID:0112094","GARD:16322","UMLS:C4748777","MEDGEN:1648440","OMIM:618236"],"synonyms":[{"name":"MC1DN14","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 14","type":"related"}],"termid":"MONDO:0032619","xrefs":{"Monarch":{"xref_id":"0032619"}}}


id: GO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by thrombin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","PMID:1672265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"thrombin-activated receptor signaling pathway","synonyms":[{"name":"thrombin receptor signaling pathway","type":"exact"},{"name":"thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070493"}


id: PBO:0066311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 5","termid":"PBO:0066311"}


id: MONDO:0004623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete prostate carcinoma in situ (obsolete MONDO:0004623)","termid":"MONDO:0004623","xrefs":{"Monarch":{"xref_id":"0004623"}}}


id: PBO:0062711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily I member 1","termid":"PBO:0062711"}


id: PBO:0038849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 17","termid":"PBO:0038849"}


id: PBO:0036059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0036059"}


id: PBO:0065840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 5","termid":"PBO:0065840"}


id: PBO:0120265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase 2","termid":"PBO:0120265"}


id: PBO:0063418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 3A","termid":"PBO:0063418"}


id: MONDO:0017922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Deafness-onychodystrophy syndrome is a group of rare, genetic, developmental defect during embryogenesis disorders characterized by the association of sensorineural deafness and onychodystrophy (e.g. absent/hypoplastic finger and toenails), as well as brachydactyly and finger-like thumbs. Additional features present in one of the diseases comprising this group include osteodystrophy, intellectual disability, seizures, developmental delay, and distinctive facies.","definition_xrefs":["Orphanet:3231"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"}],"gene_count":0,"genotype_count":0,"name":"obsolete deafness-onychodystrophy syndrome (obsolete MONDO:0017922)","termid":"MONDO:0017922","xrefs":{"Monarch":{"xref_id":"0017922"}}}


id: GO:1990394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cell wall damage. The process begins with detection of the damage and ends with a change in state or activity of the cell.","definition_xrefs":["PMID:17287531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cell wall damage","termid":"GO:1990394"}


id: PBO:0087598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; green fluorescent protein (GFP)-fusion protein localizes to the endosome","termid":"PBO:0087598"}


id: GO:0048309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The partitioning of endoplasmic reticulum between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum inheritance","synonyms":[{"name":"ER inheritance","type":"exact"}],"termid":"GO:0048309"}


id: PBO:0078481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-1","termid":"PBO:0078481"}


id: GO:0150094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amyloid-beta is removed from extracellular brain regions by cell surface receptor-mediated endocytosis, followed by intracellular degradation.","definition_xrefs":["PMID:18289866","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"amyloid-beta metabolic process","termid":"GO:0050435"},{"relation_name":"is_a","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid-beta clearance by cellular catabolic process","synonyms":[{"name":"amyloid-beta clearance by phagocytosis","type":"narrow"}],"termid":"GO:0150094"}


id: PBO:0088548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex protein","termid":"PBO:0088548"}


id: MONDO:0014670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ADGRG6 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 9","secondary_identifiers":["UMLS:C4225303","OMIM:616503","MEDGEN:903881"],"synonyms":[{"name":"ADGRG6 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS9","type":"related"},{"name":"lethal congenital contracture syndrome 9","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ADGRG6","type":"exact"},{"name":"lethal congenital contracture syndrome type 9","type":"exact"}],"termid":"MONDO:0014670","xrefs":{"Monarch":{"xref_id":"0014670"}}}


id: PBO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sec7 domain protein, ARF GEF Sec72","termid":"PBO:0002494"}


id: MONDO:0034978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare macular disorder characterized mostly by a variable degree of decreased visual acuity, jerk or pendular nystagmus, and typical ocular findings at imaging. The disease is usually bilateral. Rarely, nystagmus can be absent. Locally, the disease is characterized by underdeveloped foveal pit, absence of foveal pigmentation and/or foveal avascular zone, and persistence of inner retinal layers at the fovea, in absence of concomitant ocular or systemic pathology.","definition_xrefs":["Orphanet:519398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated foveal hypoplasia","secondary_identifiers":["GARD:22127","ICD10CM:H35.8","MEDGEN:376923","UMLS:C1850993"],"termid":"MONDO:0034978","xrefs":{"Monarch":{"xref_id":"0034978"}}}


id: PBO:0079195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 24, pseudogene","termid":"PBO:0079195"}


id: GO:0010868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of triglyceride biosynthesis. Triglyceride biosynthesis is the collection of chemical reactions and pathways resulting in the formation of triglyceride, any triester of glycerol.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride biosynthetic process","termid":"GO:0010866"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of triglyceride metabolic process","termid":"GO:0090209"},{"relation_name":"negatively_regulates","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of triglyceride biosynthetic process","synonyms":[{"name":"negative regulation of triacylglycerol biosynthetic process","type":"exact"}],"termid":"GO:0010868"}


id: FYPO:0006802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which filamentous actin (F-actin) is present in a dispersed form in the cell. Normal F-actin structures (cables and cortical patches) may or may not also be present.","definition_xrefs":["PMID:9786952","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0004803"],"is_obsolete":false,"name":"dispersed filamentous actin","synonyms":[{"name":"delocalised F-actin","type":"exact"},{"name":"delocalised actin","type":"related"},{"name":"delocalized F-actin","type":"exact"},{"name":"dispersed F-actin","type":"exact"},{"name":"dispersed actin localization during vegetative growth","type":"exact"},{"name":"dispersed filamentous actin during mitotic cell cycle","type":"related"},{"name":"dispersed filamentous actin during vegetative growth","type":"exact"},{"name":"dispersed filamentous actin in cell","type":"exact"}],"termid":"FYPO:0006802"}


id: PR:000044704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is dimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00084.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-dimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me2","type":"exact"}],"termid":"PR:000044704"}


id: PBO:0080706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 8B","termid":"PBO:0080706"}


id: GO:0005612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3, beta2 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-7 complex","synonyms":[{"name":"laminin-321 complex","type":"narrow"},{"name":"laminin-7A","type":"exact"}],"termid":"GO:0005612"}


id: MONDO:0005598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma associated with increased dopamine excretion.","definition_xrefs":["EFO:0006391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopaminergic neuroblastoma","secondary_identifiers":["PMID:3385588"],"termid":"MONDO:0005598","xrefs":{"Monarch":{"xref_id":"0005598"}}}


id: GO:0070945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a gram-negative bacterium by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"},{"relation_name":"part_of","term_name":"defense response to Gram-negative bacterium","termid":"GO:0050829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of gram-negative bacterium","synonyms":[{"name":"neutrophil mediated killing of gram-negative bacterium","type":"exact"}],"termid":"GO:0070945"}


id: MONDO:0958160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell sarcoma that is characterized by the presence of EWSR1 or FUS fusions involving partners unrelated to the ETS gene family.","definition_xrefs":["DOID:0081406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell sarcoma","termid":"MONDO:0006974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round cell sarcoma with EWSR1-non-ETS fusion","secondary_identifiers":["NCIT:C178459","UMLS:C4727985","MEDGEN:1790023"],"termid":"MONDO:0958160","xrefs":{"Monarch":{"xref_id":"0958160"}}}


id: GO:0045857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that stops, prevents, or reduces the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of molecular function, epigenetic (obsolete GO:0045857)","synonyms":[{"name":"down regulation of protein activity, epigenetic","type":"exact"},{"name":"down-regulation of protein activity, epigenetic","type":"exact"},{"name":"downregulation of protein activity, epigenetic","type":"exact"},{"name":"inhibition of protein activity, epigenetic","type":"narrow"},{"name":"negative regulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0045857"}


id: GO:0061100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the lung epithelium.","definition_xrefs":["GOC:dph","PMID:9126746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung neuroendocrine cell differentiation","termid":"GO:0061100"}


id: PBO:0005797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk34","termid":"PBO:0005797"}


id: PBO:0061085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 3","termid":"PBO:0061085"}


id: MONDO:0003672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"posterior myocardial infarction","secondary_identifiers":["SCTID:194802003","MEDGEN:90949","UMLS:C0340319","DOID:5847"],"synonyms":[{"name":"true posterior myocardial infarction","type":"exact"},{"name":"true posterior wall infarction","type":"related"}],"termid":"MONDO:0003672","xrefs":{"Monarch":{"xref_id":"0003672"}}}


id: FYPO:0002628
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in cell wall during vegetative growth","termid":"FYPO:0002627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of substance in cell wall during vegetative growth","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"decreased level of substance in cell wall during mitotic cell cycle","type":"related"},{"name":"reduced level of substance in cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002628","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0030617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Calcofluor_White","termid":"PBO:0030617"}


id: GO:0075313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to Basidiomycetes and distinguishes them from other kinds of fungi.","definition_xrefs":["GOC:mcc","GOC:pamgo_curators","GOC:di","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basidium development","termid":"GO:0075313"}


id: PBO:0062291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 2 pseudogene","termid":"PBO:0062291"}


id: PBO:0048031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 2, retinal","termid":"PBO:0048031"}


id: MONDO:0008883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, type A2, with microcephaly","secondary_identifiers":["OMIM:211369","MESH:C565894","UMLS:C1859393","MEDGEN:395250"],"synonyms":[{"name":"brachydactyly, type A2, with microcephaly","type":"exact"}],"termid":"MONDO:0008883","xrefs":{"Monarch":{"xref_id":"0008883"}}}


id: PBO:0003881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-A, F-box protein Pof4 (predicted)","termid":"PBO:0003881"}


id: GO:0090410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of malonate, the propanedioate ion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"malonate catabolic process","termid":"GO:0090410"}


id: PBO:0082352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-NADH kinase; phosphorylates both NAD and NADH; homooctameric structure consisting of 60-kDa subunits; similar to Pos5p; overexpression complements certain pos5 phenotypes; YEF1 has a paralog, UTR1, that arose from the whole genome duplication","termid":"PBO:0082352"}


id: PBO:0075964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 5","termid":"PBO:0075964"}


id: GO:0015076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of heavy metal ions into, out of or within a cell, or between cells. Heavy metals are those that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion transporter activity (obsolete GO:0015076)","synonyms":[{"name":"heavy metal ion transporter activity","type":"exact"}],"termid":"GO:0015076"}


id: MONDO:0022803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma porencephaly hydronephrosis","termid":"MONDO:0022803","xrefs":{"Monarch":{"xref_id":"0022803"}}}


id: PBO:0015695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eighteen interacting centromere protein Eic2","termid":"PBO:0015695"}


id: PBO:0034049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-child_nucleus_of_in_male","termid":"PBO:0034049"}


id: MONDO:1011419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen storage disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease, non-human animal","secondary_identifiers":["OMIA:001883"],"termid":"MONDO:1011419","xrefs":{"Monarch":{"xref_id":"1011419"}}}


id: PBO:0057182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 337","termid":"PBO:0057182"}


id: MONDO:0006884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute suppurative inflammation of the inner eye with necrosis of the sclera (and sometimes the cornea) and extension of the inflammation into the orbit. Pain may be severe and the globe may rupture. In endophthalmitis the globe does not rupture.","definition_xrefs":["MESH:D010202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"},{"relation_name":"is_a","term_name":"purulent endophthalmitis","termid":"MONDO:0004863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"panophthalmitis","secondary_identifiers":["icd11.foundation:349386559","DOID:13732","MEDGEN:10561","SCTID:33382000","MedDRA:10033683","ICD10CM:H44.01","ICD9:360.02","UMLS:C0030332"],"termid":"MONDO:0006884","xrefs":{"Monarch":{"xref_id":"0006884"}}}


id: GO:2001009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant-type cell wall cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of cellulose biosynthetic process","termid":"GO:2001006"},{"relation_name":"regulates","term_name":"plant-type cell wall cellulose biosynthetic process","termid":"GO:0052324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"regulation of cell wall cellulose biosynthesis","type":"exact"},{"name":"regulation of cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:2001009"}


id: GO:0070910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways that result in the breakdown of macromolecules that form part of a cell wall, and contributes to the breakdown of the cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process","termid":"GO:0016998"},{"relation_name":"part_of","term_name":"cell wall disassembly","termid":"GO:0044277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall macromolecule catabolic process involved in cell wall disassembly","termid":"GO:0070910"}


id: PBO:0116409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 5","termid":"PBO:0116409"}


id: MOD:01939
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following cysteine residue with the formation of (2-aminosuccinimidyl)-3-sulfanylpropanoic acid and the loss of a water molecule.","definition_xrefs":["RESID:AA0592#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid","termid":"MOD:01945"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid (Asp)","synonyms":[{"name":"(2R)-2-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid","type":"exact"},{"name":"aspartimide cysteine","type":"exact"}],"termid":"MOD:01939"}


id: PBO:0017004
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 Arrest Defective","termid":"PBO:0017004"}


id: PBO:0062857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 2","termid":"PBO:0062857"}


id: PBO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase Lys3","termid":"PBO:0000430"}


id: SO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_threonyl_carbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_threonyl_carbamoyladenosine","secondary_identifiers":["RNAMOD:012"],"synonyms":[{"name":"2-methylthio-N6-threonyl carbamoyladenosine","type":"exact"},{"name":"ms2t6A","type":"exact"},{"name":"two methylthio N6 threonyl carbamoyladenosine","type":"exact"}],"termid":"SO:0001306"}


id: PBO:0077309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 45B","termid":"PBO:0077309"}


id: PBO:0057976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3691","termid":"PBO:0057976"}


id: GO:0048052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire the specialized features of R1 and R6 photoreceptors. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R1/R6 cell differentiation","termid":"GO:0048052"}


id: GO:0030641
data:
  {"annotated_genes":["SJAG_01913","SJAG_01669","SJAG_02470","SJAG_04616","SJAG_00516","SJAG_01397","SJAG_03962","SJAG_00136","SJAG_00301","SJAG_01129","SJAG_02716","SJAG_00605","SJAG_02023","SJAG_01817","SJAG_04258","SJAG_05294","SJAG_00212","SJAG_04955"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102471],"is_not":false,"summary":null,"term":"GO:0030641"},{"annotations":[79804,72692,68113,75103,73292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[81929,74670,101973,97780,74933,75971,72787,80396,97601,105864,103595,89982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal equilibrium of hydrogen ions (protons) within a cell or between a cell and its external environment.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"},{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_00605":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02716":null,"SJAG_03962":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular pH","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"cellular hydrogen ion homeostasis","type":"exact"},{"name":"proton homeostasis","type":"exact"}],"termid":"GO:0030641","terms_by_termid":{"GO:0007035":null,"GO:0030641":null,"GO:0051453":null}}


id: PBO:0048727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycolipid transfer protein","termid":"PBO:0048727"}


id: GO:0033200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate = ADP + 4,5-bisdiphosphoinositol-1D-myo-inositol (1,2,3,6)tetrakisphosphate, and ATP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate = ADP + 5,6-bisdiphosphoinositol-1D-myo-inositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["PMID:17412958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate 5-kinase activity","synonyms":[{"name":"IP7 5-kinase activity","type":"exact"},{"name":"diphosphoinositol-pentakisphosphate 5-kinase activity","type":"exact"},{"name":"inositol heptakisphosphate 5-kinase activity","type":"exact"}],"termid":"GO:0033200"}


id: GO:0071917
data:
  {"annotated_genes":["SJAG_04406","SJAG_01960","SJAG_00276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95060,95289,114257],"is_not":false,"summary":null,"term":"GO:0071917"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a triose phosphate from one side of a membrane to the other.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null,"SJAG_04406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"triose-phosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071917","terms_by_termid":{"GO:0071917":null}}


id: PBO:0025506
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase deficiency","termid":"PBO:0025506"}


id: PBO:0056455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 1","termid":"PBO:0056455"}


id: PBO:0086687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0086687"}


id: GO:0160262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H1 = CoA + acetyl-histone H1.","definition_xrefs":["PMID:40240600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase activity","termid":"GO:0004402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0140096","GO:0003824","GO:0016740","GO:0034212"],"is_obsolete":false,"name":"histone H1 acetyltransferase activity","termid":"GO:0160262"}


id: MONDO:0010019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"selective IgA deficiency disease","termid":"MONDO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"secretory component deficiency","secondary_identifiers":["OMIM:269650","SCTID:234554004","MEDGEN:140769","MESH:C562869","UMLS:C0398709","ICD9:279.03"],"synonyms":[{"name":"IgA deficiency, secretory","type":"related"},{"name":"secretory component deficiency","type":"exact"}],"termid":"MONDO:0010019","xrefs":{"Monarch":{"xref_id":"0010019"}}}


id: PBO:0065045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3A","termid":"PBO:0065045"}


id: GO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta intraepithelial T cell differentiation","termid":"GO:0002304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"CD8-positive, gamma-delta intraepithelial T cell development","type":"related"},{"name":"CD8-positive, gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD8-positive, gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002305"}


id: PBO:0005654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/UAS domain protein Ucp10 (predicted)","termid":"PBO:0005654"}


id: PBO:0110488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor kinase PRP4K","termid":"PBO:0110488"}


id: GO:2000107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"negatively_regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte apoptotic process","synonyms":[{"name":"negative regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000107"}


id: MONDO:0001357
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","definition":"Anemia caused by the reduction of hemoglobin in relation to the red cell volume. As a result, the red cells have an area of central pallor which is increased in size. The leading cause is iron deficiency.","definition_xrefs":["NCIT:C34380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hypochromic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:8065","SCTID:44452003","HP:0001931","DOID:11759","UMLS:C0002884"],"synonyms":[{"name":"anaemia hypochromic","type":"exact"},{"name":"anemia hypochromic","type":"exact"},{"name":"hypochromic anaemia (disease)","type":"exact"},{"name":"hypochromic anemia","type":"exact"},{"name":"hypochromic anemia (disease)","type":"exact"}],"termid":"MONDO:0001357","terms_by_termid":{"MONDO:0008787":null},"xrefs":{"Monarch":{"xref_id":"0001357"}}}


id: PBO:0076086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid sulfatase (microsomal) pseudogene 1","termid":"PBO:0076086"}


id: GO:0033922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing N-acetylmuramic residues.","definition_xrefs":["EC:3.2.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"peptidoglycan beta-N-acetylmuramidase activity","secondary_identifiers":["MetaCyc:3.2.1.92-RXN"],"synonyms":[{"name":"beta-2-acetamido-3-O-(D-1-carboxyethyl)-2-deoxy-D-glucoside acetamidodeoxyglucohydrolase activity","type":"related"},{"name":"exo-beta-N-acetylmuramidase activity","type":"related"},{"name":"exo-beta-acetylmuramidase activity","type":"related"},{"name":"peptidoglycan beta-N-acetylmuramoylexohydrolase activity","type":"related"}],"termid":"GO:0033922"}


id: GO:0015227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of O-acyl-L-carnitine from one side of a membrane to the other. O-acyl-L-carnitine is the condensation product of a carboxylic acid and carnitine and is the transport form for a fatty acid crossing the mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"O-acyl-L-carnitine transmembrane transporter activity","synonyms":[{"name":"acylcarnitine transporter activity","type":"broad"}],"termid":"GO:0015227"}


id: GO:0030380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-17E receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-17E receptor binding","synonyms":[{"name":"IL-17E","type":"narrow"},{"name":"interleukin-17E receptor ligand","type":"narrow"}],"termid":"GO:0030380"}


id: PBO:0113433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small gene in chromosome III recombination enhancer; activated during mating-type switching; bound by condensin complex, deletion drastically changes chromosome III structure, alters donor preference; promoter functions as locus control region (LCR) that regulates both transcription and long-range chromatin interactions","termid":"PBO:0113433"}


id: GO:1990452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex containing Parkin (PARK2), the F-box protein FBXW7 (also called SEL-10) and a cullin from the Cul1 subfamily; substrate specificity is conferred by the F-box protein.","definition_xrefs":["GOC:bf","PMID:12628165","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Parkin-FBXW7-Cul1 ubiquitin ligase complex","synonyms":[{"name":"PRKN-FBXW7-Cul1 complex","type":"exact"},{"name":"Park2-FBXW7-Cul1 complex","type":"exact"},{"name":"Parkin-FBXW7-Cul1 protein complex","type":"exact"},{"name":"Parkin-HSel-10-Cullin-1 complex","type":"narrow"},{"name":"Parkin/Cul1/F-box protein complex","type":"exact"}],"termid":"GO:1990452"}


id: PBO:0061457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin receptor associated death domain, pseudogene","termid":"PBO:0061457"}


id: GO:0051853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an associated organism causes the formation of an abnormal mass of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction in symbiont of tumor, nodule, or growth (obsolete GO:0051853)","synonyms":[{"name":"induction in symbiont of tumor, nodule, or growth","type":"exact"}],"termid":"GO:0051853"}


id: GO:0031986
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A leucoplast in which protein is stored.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast","termid":"GO:0009516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"proteinoplast","secondary_identifiers":["Wikipedia:Proteinoplast"],"termid":"GO:0031986"}


id: PBO:0063892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Q","termid":"PBO:0063892"}


id: MONDO:0009747
data:
  {"annotated_genes":["SJAG_01649"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87554],"is_not":false,"summary":null,"term":"MONDO:0009747"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome, hepatocerebral form","termid":"MONDO:0100512"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 6 (hepatocerebral type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:338045","DOID:0080125","GARD:3972","MESH:C538344","OMIM:256810","Orphanet:255229","UMLS:C1850406"],"synonyms":[{"name":"MPV17-related hepatocerebral mitochondrial DNA depletion syndrome","type":"related"},{"name":"MTDPS6","type":"related"},{"name":"NN","type":"related"},{"name":"Navajo familial neurogenic arthropathy","type":"related"},{"name":"Navajo neurohepatopathy","type":"exact"},{"name":"Navajo neuropathy","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 6","type":"related"},{"name":"mitochondrial DNA depletion syndrome 6 (hepatocerebral type)","type":"exact"}],"termid":"MONDO:0009747","terms_by_termid":{"MONDO:0009747":null},"xrefs":{"Monarch":{"xref_id":"0009747"}}}


id: PBO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 13","termid":"PBO:0042598"}


id: PR:Q9C1X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bop1 gene.","definition_xrefs":["UniProtKB:Q9C1X4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P32A8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP32A8.03c","synonyms":[{"name":"Spom972h-bop1","type":"exact"}],"termid":"PR:Q9C1X4"}


id: GO:0150017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the basal pole of a neuron (e.g. in bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon), and which is the closest to the cell body of the neuron (the soma).","definition_xrefs":["PMID:17046728","PMID:22683681","PMID:1720142","PMID:9214543","GOC:aruk","GOC:bc","PMID:16899232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal dendrite","termid":"GO:0097441"},{"relation_name":"is_a","term_name":"proximal dendrite","termid":"GO:1990635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal proximal dendrite","termid":"GO:0150017"}


id: MONDO:0012181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary spastic paraplegia that has material basis in variation in the chromosome region 10q22.1-q24.1.","definition_xrefs":["PMID:15455396","DOID:0110778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 27","secondary_identifiers":["GARD:16940","MESH:C563807","OMIM:609041","UMLS:C1836899","Orphanet:101007","MEDGEN:373203"],"synonyms":[{"name":"SPG27","type":"exact"},{"name":"autosomal recessive spastic paraplegia 27","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 27","type":"exact"},{"name":"hereditary spastic paraplegia type 27","type":"exact"},{"name":"spastic paraplegia 27, autosomal recessive","type":"related"}],"termid":"MONDO:0012181","xrefs":{"Monarch":{"xref_id":"0012181"}}}


id: PBO:0091041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA complex subunit Tti2","termid":"PBO:0091041"}


id: GO:0046459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a short-chain fatty acid. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"short-chain fatty acid metabolic process","synonyms":[{"name":"short-chain fatty acid metabolism","type":"exact"}],"termid":"GO:0046459"}


id: GO:0006410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cellular synthesis of DNA on a template of RNA.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription, RNA-dependent (obsolete GO:0006410)","synonyms":[{"name":"transcription, RNA-dependent","type":"exact"}],"termid":"GO:0006410"}


id: GO:1901971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA-5-methylcytosine glycosylase activity.","definition_xrefs":["GOC:TermGenie","PMID:23316050"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-5-methylcytosine glycosylase activity (obsolete GO:1901971)","termid":"GO:1901971"}


id: MONDO:0003104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the epicardium.","direct_ancestors":[{"relation_name":"is_a","term_name":"pericardium cancer","termid":"MONDO:0001322"},{"relation_name":"is_a","term_name":"neoplasm of epicardium","termid":"MONDO:0021379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0004992"],"is_obsolete":false,"name":"epicardium cancer","secondary_identifiers":["MEDGEN:388560","NCIT:C4568","UMLS:C2607932","DOID:4699"],"synonyms":[{"name":"cancer of epicardium","type":"exact"},{"name":"epicardial tumor","type":"broad"},{"name":"epicardial tumour","type":"broad"},{"name":"epicardium cancer","type":"exact"},{"name":"malignant epicardial neoplasm","type":"exact"},{"name":"malignant epicardial tumor","type":"exact"},{"name":"malignant epicardial tumour","type":"exact"},{"name":"malignant epicardium neoplasm","type":"exact"},{"name":"malignant neoplasm of epicardium","type":"exact"},{"name":"malignant neoplasm of the epicardium","type":"exact"},{"name":"malignant tumor of epicardium","type":"exact"},{"name":"malignant tumor of the epicardium","type":"exact"},{"name":"malignant tumour of epicardium","type":"exact"},{"name":"malignant tumour of the epicardium","type":"exact"}],"termid":"MONDO:0003104","xrefs":{"Monarch":{"xref_id":"0003104"}}}


id: GO:0034324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a hexyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete O-hexanoyltransferase activity (obsolete GO:0034324)","termid":"GO:0034324"}


id: MONDO:1012528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral deafness and vestibular dysfunction, non-human animal","termid":"MONDO:1011711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral deafness and vestibular dysfunction, dog","secondary_identifiers":["OMIA:002196-9615"],"termid":"MONDO:1012528","xrefs":{"Monarch":{"xref_id":"1012528"}}}


id: GO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + UDP-D-glucose = a flavanone 7-O-beta-D-glucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.185-RXN","EC:2.4.1.185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"flavanone 7-O-beta-glucosyltransferase activity","synonyms":[{"name":"UDP-glucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hesperetin 7-O-glucosyl-transferase activity","type":"related"},{"name":"naringenin 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-flavanone 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047243"}


id: GO:0050763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of depsipeptides, a linear or cyclic compound composed of both amino acids and hydroxy acids in peptide and ester bonds respectively.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"depsipeptide biosynthetic process","synonyms":[{"name":"depsipeptide anabolism","type":"exact"},{"name":"depsipeptide biosynthesis","type":"exact"},{"name":"depsipeptide formation","type":"exact"},{"name":"depsipeptide synthesis","type":"exact"}],"termid":"GO:0050763"}


id: GO:0006536
data:
  {"annotated_genes":["SJAG_04145","SJAG_00695","SJAG_03306","SJAG_00359","SJAG_00714","SJAG_00495","SJAG_03224","SJAG_04054","SJAG_03266","SJAG_02235","SJAG_00529","SJAG_00937","SJAG_01903","SJAG_01592","SJAG_03434","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89789,92827,94887,104575,106712,113802,113899],"is_not":false,"summary":null,"term":"GO:0006536"},{"annotations":[74030,96218,119737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[80282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[119738,60355,113227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[81501,93659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[72148,80006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_00495":null,"SJAG_00529":null,"SJAG_00695":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_01592":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_03224":null,"SJAG_03266":null,"SJAG_03306":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_04054":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glutamate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glutamic_acid"],"synonyms":[{"name":"glutamate metabolism","type":"exact"},{"name":"glutamic acid metabolic process","type":"exact"},{"name":"glutamic acid metabolism","type":"exact"}],"termid":"GO:0006536","terms_by_termid":{"GO:0006536":null,"GO:0006538":null,"GO:0010133":null,"GO:0019544":null,"GO:0019676":null,"GO:0097054":null}}


id: PBO:0079982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 20","termid":"PBO:0079982"}


id: MONDO:0015728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"15q overgrowth syndrome","termid":"MONDO:0017806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 15q","secondary_identifiers":["GARD:18740","MEDGEN:419879","NORD:942","UMLS:C2931705","MESH:C538036","Orphanet:1707"],"synonyms":[{"name":"Chromosome 15, Distal Trisomy 15q","type":"exact"},{"name":"distal duplication 15q","type":"exact"},{"name":"distal trisomy type 15q","type":"exact"},{"name":"telomeric duplication 15q","type":"exact"},{"name":"trisomy 15qter","type":"exact"}],"termid":"MONDO:0015728","xrefs":{"Monarch":{"xref_id":"0015728"}}}


id: PBO:0046058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit I","termid":"PBO:0046058"}


id: GO:0021907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid","PMID:11262869","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"spinal cord anterior/posterior patterning","termid":"GO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in spinal cord anterior/posterior pattern formation","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021907"}


id: PBO:0058801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7843","termid":"PBO:0058801"}


id: PBO:0071006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 8","termid":"PBO:0071006"}


id: FYPO:0006725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of microtubule binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal microtubule binding","termid":"FYPO:0006725"}


id: PBO:0039276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 5, pseudogene","termid":"PBO:0039276"}


id: PBO:0065018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 2 pseudogene 2","termid":"PBO:0065018"}


id: FYPO:0003441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to actin cytoskeleton during vegetative growth","synonyms":[{"name":"normal protein localisation to actin cytoskeleton during vegetative growth","type":"exact"},{"name":"normal protein localization to actin cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003441"}


id: PBO:0063636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFN2 antisense RNA 1","termid":"PBO:0063636"}


id: FYPO:0007869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the lateral cell cortex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to lateral cell cortex","synonyms":[{"name":"abnormal protein localisation to lateral cell cortex","type":"exact"},{"name":"abnormal protein localization to lateral cortex","type":"exact"}],"termid":"FYPO:0007869"}


id: FYPO:0000446
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"mitotic G2 phase arrest","type":"related"},{"name":"mitotic G2/M phase transition arrest","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic cell cycle progression at mitotic G2/M phase transition: arrested","type":"related"}],"termid":"FYPO:0000446","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0052701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 2","termid":"PBO:0052701"}


id: GO:0102729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 6-oxocampestanol + O2 + NADPH = cathasterone + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-oxocampestanol hydroxylase activity (obsolete GO:0102729)","termid":"GO:0102729"}


id: PBO:0053630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 676","termid":"PBO:0053630"}


id: MONDO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation-related bone disorder (obsolete MONDO:0018292)","secondary_identifiers":["Orphanet:371195"],"synonyms":[{"name":"CDG-related bone disorder","type":"exact"}],"termid":"MONDO:0018292","xrefs":{"Monarch":{"xref_id":"0018292"}}}


id: PBO:0048447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GBX2 and ASB18 antisense RNA 1","termid":"PBO:0048447"}


id: GO:1901344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptomycin B stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to leptomycin B","termid":"GO:1901344"}


id: PBO:0076010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1 pseudogene 1","termid":"PBO:0076010"}


id: PATO:0001998
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of its visibility.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conspicuousness","termid":"PATO:0001998"}


id: MONDO:0016470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos/osteogenesis imperfecta syndrome is an association of the features of Ehlers-Danlos syndrome and osteogenesis imperfecta, characterized by generalized joint hypermobility and dislocations, skin hyperextensibility and/or translucency, and easy bruising as the predominant clinical features, while being invariably associated with mild signs of osteogenesis imperfecta, including short stature, blue sclera, and osteopenia or fractures.","definition_xrefs":["Orphanet:230857"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos/osteogenesis imperfecta syndrome","secondary_identifiers":["MESH:C565178","MEDGEN:1386497","OMIMPS:619115","UMLS:C4518787","GARD:17156"],"synonyms":[{"name":"EDS/OI syndrome","type":"exact"}],"termid":"MONDO:0016470","xrefs":{"Monarch":{"xref_id":"0016470"}}}


id: PBO:0113815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, ubiquitin related","termid":"PBO:0113815"}


id: GO:2000390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil extravasation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil migration","termid":"GO:1902623"},{"relation_name":"is_a","term_name":"regulation of neutrophil extravasation","termid":"GO:2000389"},{"relation_name":"negatively_regulates","term_name":"neutrophil extravasation","termid":"GO:0072672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil extravasation","termid":"GO:2000390"}


id: GO:0062173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which living organisms transform brexanolone.","definition_xrefs":["PMID:24390875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"brexanolone metabolic process","synonyms":[{"name":"allopregnanolone metabolic process","type":"exact"},{"name":"allopregnanolone metabolism","type":"exact"},{"name":"allotetrahydroprogesterone metabolic process","type":"exact"},{"name":"allotetrahydroprogesterone metabolism","type":"exact"},{"name":"brexanolone metabolism","type":"exact"}],"termid":"GO:0062173"}


id: GO:0010500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the transmitting tract over time, from its formation to the mature structure. The transmitting tissue is the tissue in the style of a carpel through which the pollen tube grows; it connects the stigma and the inside of ovary.","definition_xrefs":["PMID:17855426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gynoecium development","termid":"GO:0048467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transmitting tissue development","termid":"GO:0010500"}


id: MONDO:0035541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split cord malformation type II (obsolete MONDO:0035541)","secondary_identifiers":["Orphanet:573253"],"termid":"MONDO:0035541","xrefs":{"Monarch":{"xref_id":"0035541"}}}


id: GO:0072324
data:
  {"annotated_genes":["SJAG_02718","SJAG_01855","SJAG_01017","SJAG_00146"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95499,95960,97117,113304],"is_not":false,"summary":null,"term":"GO:0072324"}]},"cv_name":"cellular_component","definition":"Ascus cytoplasm that is not packaged into ascospores.","definition_xrefs":["GOC:mcc","DOI:10.1016/S0953-7562(96)80057-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00146":null,"SJAG_01017":null,"SJAG_01855":null,"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus epiplasm","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072324","terms_by_termid":{"GO:0072324":null}}


id: GO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein transport process that contributes to protein import into the nucleus, and that results in the vectorial transfer of a cargo-carrier protein complex through the nuclear pore complex from the cytoplasmic side to the nucleoplasmic side of the nuclear envelope.","definition_xrefs":["PMID:14570049","ISBN:0198506732","PMID:9126736","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, translocation (obsolete GO:0000060)","synonyms":[{"name":"protein import into cell nucleus, translocation","type":"exact"},{"name":"protein translocation during protein import into nucleus","type":"exact"},{"name":"protein translocation during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein translocation during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, translocation","type":"exact"},{"name":"protein-nucleus import, translocation","type":"exact"}],"termid":"GO:0000060"}


id: MONDO:0020067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute infectious process that affects the brain tissue. It is usually caused by viruses and less often by bacteria, parasites, and fungi.","definition_xrefs":["NCIT:C79550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious encephalitis","secondary_identifiers":["SCTID:312215006","UMLS:C0596773","ICD9:323.4","MESH:D000069544","ICD9:049.8","MEDGEN:108917"],"synonyms":[{"name":"encephalitis infection","type":"exact"}],"termid":"MONDO:0020067","xrefs":{"Monarch":{"xref_id":"0020067"}}}


id: MONDO:0000006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alopecia-mental retardation syndrome (obsolete MONDO:0000006)","termid":"MONDO:0000006","xrefs":{"Monarch":{"xref_id":"0000006"}}}


id: PBO:0051193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-11 (pseudogene)","termid":"PBO:0051193"}


id: PBO:0003196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Rxt2","termid":"PBO:0003196"}


id: PBO:0028521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation","termid":"PBO:0028521"}


id: GO:1990117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:BHF","PMID:15214043","GOC:rl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"},{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"},{"relation_name":"part_of","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"B cell receptor apoptotic signaling pathway","synonyms":[{"name":"B cell receptor extrinsic apoptotic signaling pathway","type":"exact"},{"name":"extrinsic apoptotic signaling pathway via B cell antigen receptor","type":"related"},{"name":"extrinsic apoptotic signaling pathway via BCR","type":"related"}],"termid":"GO:1990117"}


id: GO:0043729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + H2O = 2,5-diamino-6-(1-D-ribosylamino)pyrimidin-4(3H)-one 5'-phosphate + formate + H+.","definition_xrefs":["RHEA:27282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"2-amino-5-formylamino-6-(5-phosphoribosylamino)pyrimidin-4(3H)-one formate-lyase activity","secondary_identifiers":["EC:3.5.1.102"],"termid":"GO:0043729"}


id: PR:Q10111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.12c gene.","definition_xrefs":["UniProtKB:Q10111","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.12c","synonyms":[{"name":"Spom972h-SPAC18G6.12c","type":"exact"}],"termid":"PR:Q10111"}


id: PR:O14256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G10.10c gene.","definition_xrefs":["UniProtKB:O14256","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.10c","synonyms":[{"name":"Spom972h-SPAC6G10.10c","type":"exact"}],"termid":"PR:O14256"}


id: PBO:0005589
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates genes involved in nitrogen metabolism","termid":"PBO:0005589"}


id: PBO:0116980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGL1 antisense RNA 1","termid":"PBO:0116980"}


id: PBO:0050922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 5","termid":"PBO:0050922"}


id: PBO:0109479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxymethyl-3-methylglutaryl-CoA lyase L1","termid":"PBO:0109479"}


id: PR:Q9P7D8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.10 gene.","definition_xrefs":["UniProtKB:Q9P7D8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized rhomboid protein P4H10.10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.10","synonyms":[{"name":"Spom972h-SPBP4H10.10","type":"exact"}],"termid":"PR:Q9P7D8"}


id: MONDO:0003185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma primarily involving the breast. Three morphologic patterns are seen: cribriform, trabecular, and solid. The prognosis is excellent.","definition_xrefs":["NCIT:C5130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenoid cystic breast carcinoma","secondary_identifiers":["MEDGEN:231031","UMLS:C1332167","ONCOTREE:ACBC","DOID:4877","EFO:1000071"],"synonyms":[{"name":"adenocystic breast carcinoma","type":"exact"},{"name":"adenocystic carcinoma of breast","type":"exact"},{"name":"adenocystic carcinoma of the breast","type":"exact"},{"name":"adenoid cystic breast cancer","type":"related"},{"name":"adenoid cystic breast carcinoma","type":"exact"},{"name":"adenoid cystic carcinoma of breast","type":"exact"},{"name":"adenoid cystic carcinoma of the breast","type":"exact"},{"name":"breast adenoid cystic carcinoma","type":"exact"},{"name":"mammary adenocystic carcinoma","type":"exact"},{"name":"mammary adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003185","xrefs":{"Monarch":{"xref_id":"0003185"}}}


id: PBO:0050998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 172","termid":"PBO:0050998"}


id: GO:0032475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to an otolith. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"otolith morphogenesis","termid":"GO:0032474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith formation","termid":"GO:0032475"}


id: MOD:00922
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Cy3 CyDye DIGE Fluor saturation dye","synonyms":[{"name":"Cy3 CyDye DIGE Fluor saturation dye","type":"related"},{"name":"CyDye-Cy3","type":"related"}],"termid":"MOD:00922"}


id: PBO:0045218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene","termid":"PBO:0045218"}


id: GO:0070281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, a form of vitamin B6.","definition_xrefs":["CHEBI:16410","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyridoxamine binding","termid":"GO:0070281"}


id: PBO:0016062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase (predicted)","termid":"PBO:0016062"}


id: PBO:0034584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity_during_G0_to_G1_transition","termid":"PBO:0034584"}


id: PBO:0060503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 2","termid":"PBO:0060503"}


id: GO:0102913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(aminomethyl)indole + S-adenosyl-L-methionine = (1H-indol-3-yl)-N-methylmethanamine + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:52268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"3-aminomethylindole N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8686"],"termid":"GO:0102913"}


id: MONDO:1011602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in Chinese hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, Chinese hamster","secondary_identifiers":["OMIA:000284-10029"],"termid":"MONDO:1011602","xrefs":{"Monarch":{"xref_id":"1011602"}}}


id: GO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a lymphocyte.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte mediated immunity","synonyms":[{"name":"cell-mediated immunity","type":"broad"},{"name":"cellular immune response","type":"broad"}],"termid":"GO:0002449"}


id: GO:1900501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA catabolic process to butyrate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA catabolic process to butyrate","termid":"GO:1900500"},{"relation_name":"negatively_regulates","term_name":"butyryl-CoA catabolic process to butyrate","termid":"GO:0044581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"negative regulation of butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"down regulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"down regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"down-regulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"down-regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"downregulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"downregulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"inhibition of butyryl-CoA catabolic process to butyrate","type":"narrow"},{"name":"inhibition of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"negative regulation of butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:1900501"}


id: MONDO:0016890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8p deletion is a chromosome abnormality that affects many different parts of the body. People with this condition are missing genetic material located on the short arm (p) of chromosome 8 in each cell. The severity of the condition and the associated signs and symptoms vary based on the size and location of the deletion and which genes are involved. Most cases are not inherited, although affected people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 8","termid":"MONDO:0016873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 8","secondary_identifiers":["UMLS:C2931635","icd11.foundation:635585868","GARD:3768","Orphanet:261920","MEDGEN:444105","MESH:C537826"],"synonyms":[{"name":"8p deletion","type":"related"},{"name":"8p monosomy","type":"related"},{"name":"chromosome 8p deletion","type":"related"},{"name":"deletion 8p","type":"related"},{"name":"monosomy 8p","type":"related"},{"name":"partial deletion of chromosome 8p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 8","type":"exact"},{"name":"partial monosomy 8p","type":"related"},{"name":"partial monosomy of chromosome 8p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 8","type":"exact"}],"termid":"MONDO:0016890","xrefs":{"Monarch":{"xref_id":"0016890"}}}


id: GO:0044695
data:
  {"annotated_genes":["SJAG_01657","SJAG_02703","SJAG_03302","SJAG_00552","SJAG_04151","SJAG_01585"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66202,73020,90929,109979,114809,118385],"is_not":false,"summary":null,"term":"GO:0044695"}]},"cv_name":"cellular_component","definition":"An E3 ubiquitin ligase complex localized to the ER and Golgi membrane. In fission yeast comprises Dsc1, 2, 3 and 4. Involved in the processes of fission yeast sre1 (human SREBP) transcriptional activator proteolytic cleavage, the multivesicular body (MVB) pathway, and a post-endoplasmic reticulum pathway for protein catabolism.","definition_xrefs":["PMID:21504829","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00552":null,"SJAG_01585":null,"SJAG_01657":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_04151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044695","terms_by_termid":{"GO:0044695":null}}


id: SO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyl_2_thiouridine","secondary_identifiers":["RNAMOD:059"],"synonyms":[{"name":"5-methyl-2-thiouridine","type":"exact"},{"name":"five methyl 2 thiouridine","type":"exact"},{"name":"m5s2U","type":"exact"}],"termid":"SO:0001351"}


id: PBO:0116287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein; involved in the assembly and function of the V-ATPase; proposed role as a signaling component that regulates autophagy independent of TOR; required for biosynthesis of cell wall beta-1,6-glucan; functional homolog of human ATP6AP1; analogous follicular lymphoma-associated mutation induces autophagy","termid":"PBO:0116287"}


id: MONDO:0100355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A classic (severe) or non-classic (mild or intermediate) form of a genetic disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classic or non-classic genetic disease presentation","termid":"MONDO:0100355","xrefs":{"Monarch":{"xref_id":"0100355"}}}


id: PBO:0062917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y1","termid":"PBO:0062917"}


id: GO:1905351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a pericyte cell from one site to another.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","GOC:TermGenie","PMID:26268439","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericyte cell migration","termid":"GO:1905351"}


id: PBO:0036433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A nucleosome disassembly protein Ccp1","termid":"PBO:0036433"}


id: MONDO:0019835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immune-mediated inflammation of the pituitary gland often associated with other autoimmune diseases (e.g., hashimoto disease; graves disease; and addison disease).","definition_xrefs":["MESH:D000069281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"acquired pituitary hormone deficiency","termid":"MONDO:0019832"},{"relation_name":"is_a","term_name":"hypophysitis","termid":"MONDO:0021156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary hypophysitis","secondary_identifiers":["GARD:19281","UMLS:C0342410","NCIT:C132055","ICD9:279.49","MEDGEN:575013","Orphanet:95506","SCTID:237706000","ICD9:253.8"],"synonyms":[{"name":"autoimmune hypophysitis","type":"exact"},{"name":"lymphocytic hypophysitis","type":"exact"}],"termid":"MONDO:0019835","xrefs":{"Monarch":{"xref_id":"0019835"}}}


id: PBO:0068049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 354","termid":"PBO:0068049"}


id: PBO:0075961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD3 N-terminal like","termid":"PBO:0075961"}


id: PBO:0066181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM5 antisense RNA 1","termid":"PBO:0066181"}


id: MONDO:0850156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that is characterized by the presence of lymphoblasts that carry a translocation between the KMT2A gene at 11q23.3 and another gene partner resulting in the production of a KMT2A related fusion protein.","definition_xrefs":["DOID:0080644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma MLL rearranged","termid":"MONDO:0850156","xrefs":{"Monarch":{"xref_id":"0850156"}}}


id: PBO:0069798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1084, pseudogene","termid":"PBO:0069798"}


id: MONDO:0010606
data:
  {"annotated_genes":["SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88713],"is_not":false,"summary":null,"term":"MONDO:0010606"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diaphragmatic hernia","termid":"MONDO:0005711"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03088":null},"genotype_count":0,"is_obsolete":false,"name":"hernia, anterior diaphragmatic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:306950","UMLS:C1844025","GARD:15295","MESH:C564413","MEDGEN:334881"],"synonyms":[{"name":"hernia, anterior diaphragmatic","type":"exact"}],"termid":"MONDO:0010606","terms_by_termid":{"MONDO:0010606":null},"xrefs":{"Monarch":{"xref_id":"0010606"}}}


id: GO:0035486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a C/C mispair.","definition_xrefs":["GOC:jh","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"cytosine/cytosine mispair binding","synonyms":[{"name":"C/C mispair binding","type":"exact"}],"termid":"GO:0035486"}


id: FYPO:0001138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature 5.8S rRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature rRNA level","termid":"FYPO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased mature 5.8S rRNA level","synonyms":[{"name":"decreased 5.8S rRNA level","type":"broad"},{"name":"decreased 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 5.8S rRNA accumulation","type":"related"},{"name":"decreased mature 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 5.8S rRNA transcript level","type":"exact"},{"name":"reduced mature 5.8S rRNA level","type":"exact"}],"termid":"FYPO:0001138"}


id: MONDO:0011452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the LIPH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"isolated familial wooly hair disorder","termid":"MONDO:0008686"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 7","secondary_identifiers":["DOID:0110704","GARD:8178","OMIM:604379","UMLS:C1836672","MESH:C536973","MEDGEN:322969"],"synonyms":[{"name":"HYPT7","type":"exact"},{"name":"LAH2","type":"exact"},{"name":"LIPH hypotrichosis","type":"exact"},{"name":"Lah2","type":"exact"},{"name":"Mari type alopecia universalis congenita","type":"related"},{"name":"Wh/Ht","type":"related"},{"name":"alopecia universalis congenita, Mari type","type":"related"},{"name":"hypotrichosis 7","type":"exact"},{"name":"hypotrichosis caused by mutation in LIPH","type":"exact"},{"name":"hypotrichosis type 7","type":"exact"},{"name":"hypotrichosis, autosomal recessive","type":"related"},{"name":"hypotrichosis, localized, autosomal recessive 2","type":"exact"},{"name":"hypotrichosis, total, Mari type","type":"related"},{"name":"total Mari type hypotrichosis,","type":"exact"},{"name":"total hypotrichosis, Mari type","type":"related"},{"name":"woolly hair, autosomal recessive 2 with or without hypotrichosis","type":"exact"},{"name":"woolly hair, autosomal recessive 2, with or without hypotrichosis","type":"related"},{"name":"wooly hair, autosomal recessive 2 with or without hypotrichosis","type":"exact"},{"name":"wooly hair, autosomal recessive 2, with or without hypotrichosis","type":"related"}],"termid":"MONDO:0011452","xrefs":{"Monarch":{"xref_id":"0011452"}}}


id: PBO:0087351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle positioning factor; orients astral microtubules, connecting them to actin cables at the cortex with Bim1p and Myo2, resulting in proper spindle positioning; targeted for StuBL-dependent degradation at kinetochores by Slx5p-Slx8p, ensuring chromosome transmission fidelity and correct spindle positioning; role in karyogamy; localizes to the shmoo tip, the growing bud-tip, the nucleus, the kinetochore, the spindle and microtubules; homolog of adenomatous polyposis coli","termid":"PBO:0087351"}


id: PBO:0049044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 35","termid":"PBO:0049044"}


id: PBO:0001685
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains DRE element","termid":"PBO:0001685"}


id: MONDO:0010244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGF1","secondary_identifiers":["MEDGEN:338395","OMIM:300082","UMLS:C1848140"],"synonyms":[{"name":"CGF1","type":"exact"},{"name":"cognitive function 1, social","type":"exact"},{"name":"social cognition","type":"exact"}],"termid":"MONDO:0010244","xrefs":{"Monarch":{"xref_id":"0010244"}}}


id: PBO:0002878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yippee-like protein","termid":"PBO:0002878"}


id: FYPO:0001061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal glutamine import","synonyms":[{"name":"abnormal L-glutamine import","type":"narrow"},{"name":"abnormal L-glutamine import across plasma membrane","type":"exact"},{"name":"abnormal glutamine import during mitotic cell cycle","type":"related"},{"name":"abnormal glutamine import during vegetative growth","type":"exact"},{"name":"abnormal glutamine import into cell","type":"exact"},{"name":"abnormal glutamine uptake","type":"exact"}],"termid":"FYPO:0001061"}


id: PBO:0029636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_stubby_vegetative_cell","termid":"PBO:0029636"}


id: PBO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein (predicted)","termid":"PBO:0000478"}


id: PBO:0081078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 9","termid":"PBO:0081078"}


id: PR:O74400
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 28 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C4F6.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.14","secondary_identifiers":["UniProtKB:O74400"],"synonyms":[{"name":"Spom972h-RBM28","type":"exact"}],"termid":"PR:O74400"}


id: GO:0018760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 H+ + thiocyanate = carbonyl sulfide + NH4.","definition_xrefs":["RHEA:21464","EC:3.5.5.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles","termid":"GO:0016815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"thiocyanate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R05780","UM-BBD_reactionID:r0598","MetaCyc:RXN-1761"],"synonyms":[{"name":"thiocyanate aminohydrolase activity","type":"related"}],"termid":"GO:0018760"}


id: GO:1903341
data:
  {"annotated_genes":["SJAG_03720","SJAG_00100","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110337,104332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[118232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic DNA double-strand break formation.","definition_xrefs":["GOC:TermGenie","PMID:25103240","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of meiotic DNA double-strand break formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903341","terms_by_termid":{"GO:0062209":null,"GO:1905263":null}}


id: PBO:0065102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type II regulatory subunit alpha","termid":"PBO:0065102"}


id: PBO:0011958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_amino_acid_deletion","termid":"PBO:0011958"}


id: PBO:0042287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2 associated protein","termid":"PBO:0042287"}


id: PBO:0042837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 36","termid":"PBO:0042837"}


id: GO:1901383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chorionic trophoblast cell proliferation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of chorionic trophoblast cell proliferation","termid":"GO:1901382"},{"relation_name":"negatively_regulates","term_name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chorionic trophoblast cell proliferation","synonyms":[{"name":"down regulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"down-regulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"downregulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"inhibition of chorionic trophoblast cell proliferation","type":"narrow"}],"termid":"GO:1901383"}


id: PBO:0058560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6502","termid":"PBO:0058560"}


id: GO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of apical-to-basolateral delivery of soluble and particulate antigens to underlying mucosal-associated lymphoid tissue.","definition_xrefs":["PMID:12843411","PMID:15681746","PMID:11896763","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"mucosal immune response","termid":"GO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen sampling in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen sampling in MALT","type":"exact"},{"name":"antigen transport in MALT","type":"related"},{"name":"antigen transport in mucosal-associated lymphoid tissue","type":"related"}],"termid":"GO:0002404"}


id: SO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methoxycarbonylmethyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyl_two_thiouridine","secondary_identifiers":["RNAMOD:070"],"synonyms":[{"name":"5-methoxycarbonylmethyl-2-thiouridine","type":"exact"},{"name":"five methoxycarbonylmethyl two thiouridine","type":"exact"},{"name":"mcm5s2U","type":"exact"}],"termid":"SO:0001362"}


id: PBO:0031210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snowman-shaped_spore","termid":"PBO:0031210"}


id: MONDO:0020402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Accessory mitral valve tissue is a congenital non-syndromic heart malformation defined as an accessory mitral valve leaflet or various accessory mitral valve structures. It may be asymptomatic or present at various ages with symptoms of left ventricular outflow tract obstruction, low cardiac output due to subaortic obstruction or congestive heart failure. In some cases, it may be a source of cardioembolism. The malformation may be isolated or associated with other congenital heart malformations.","definition_xrefs":["Orphanet:99061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital accessory mitral valve tissue","secondary_identifiers":["GARD:19628","UMLS:C0344774","MEDGEN:576493"],"termid":"MONDO:0020402","xrefs":{"Monarch":{"xref_id":"0020402"}}}


id: PBO:0071465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 6","termid":"PBO:0071465"}


id: MONDO:0022613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bruyn scheltens syndrome","termid":"MONDO:0022613","xrefs":{"Monarch":{"xref_id":"0022613"}}}


id: MONDO:0018481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An esophageal carcinoma characterized by the absence of microscopic features of squamous differentiation. However, there is immunohistochemical evidence of squamous differentiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal squamous cell carcinoma","termid":"MONDO:0005580"},{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"undifferentiated carcinoma of esophagus","secondary_identifiers":["GARD:21742","MEDGEN:412163","NCIT:C27422","Orphanet:418951","UMLS:C2188058"],"synonyms":[{"name":"esophageal undifferentiated carcinoma","type":"exact"},{"name":"esophagus undifferentiated carcinoma","type":"exact"},{"name":"oesophagus undifferentiated carcinoma","type":"exact"},{"name":"undifferentiated esophageal cancer","type":"exact"},{"name":"undifferentiated esophageal carcinoma","type":"exact"}],"termid":"MONDO:0018481","xrefs":{"Monarch":{"xref_id":"0018481"}}}


id: GO:0050598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + taxa-4(20),11-dien-5alpha-ol = H2O + NADP+ + taxa-4(20),11-dien-5alpha,13alpha-diol.","definition_xrefs":["RHEA:18949","EC:1.14.14.106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"taxane 13-alpha-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06308","MetaCyc:1.14.13.77-RXN"],"synonyms":[{"name":"taxa-4(20),11-dien-5alpha-ol,NADPH:oxygen oxidoreductase (13alpha-hydroxylating)","type":"related"},{"name":"taxane 13a-hydroxylase activity","type":"exact"},{"name":"taxane 13alpha-hydroxylase activity","type":"related"}],"termid":"GO:0050598"}


id: MOD:00687
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and either an alkyl C as in lanthionine, or an aryl C as 2'-(S-cysteinyl)-L-histidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"thioether crosslinked residues","termid":"MOD:00687"}


id: GO:1901196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of calcium-mediated signaling that is involved in cellular response to salt stress.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"part_of","term_name":"cellular response to salt stress","termid":"GO:0071472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium-mediated signaling involved in cellular response to salt stress","synonyms":[{"name":"activation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"narrow"},{"name":"activation of calcium-mediated signaling involved in cellular response to salt stress","type":"narrow"},{"name":"activation of calcium-mediated signaling involved in cellular salinity response","type":"narrow"},{"name":"positive regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular response to salt stress","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular salinity response","type":"exact"},{"name":"stimulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"narrow"},{"name":"stimulation of calcium-mediated signaling involved in cellular response to salt stress","type":"narrow"},{"name":"stimulation of calcium-mediated signaling involved in cellular salinity response","type":"narrow"},{"name":"up regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"up regulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"up regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"}],"termid":"GO:1901196"}


id: PBO:0087653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric cochaperone prefoldin complex; prefoldin binds specifically to cytosolic chaperonin and transfers target proteins to it; prefoldin complex also localizes to chromatin of actively transcribed genes in the nucleus and facilitates transcriptional elongation","termid":"PBO:0087653"}


id: MONDO:0015320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pierre Robin syndrome associated with a chromosomal anomaly (obsolete MONDO:0015320)","termid":"MONDO:0015320","xrefs":{"Monarch":{"xref_id":"0015320"}}}


id: SO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome may be generated by recombination between two inversions; presumed to have a deficiency or duplication at each end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid_chromosome","termid":"SO:0000550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_aneuploid_chromosome","synonyms":[{"name":"inversion derived aneuploid chromosome","type":"exact"}],"termid":"SO:0000567"}


id: GO:0090669
data:
  {"annotated_genes":["SJAG_04586"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92582],"is_not":false,"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Prevention of degradation of telomerase RNA (TERC) molecules.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:25467444","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA stabilization","termid":"GO:0043489"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"telomerase RNA stabilization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TERC stabilization","type":"exact"}],"termid":"GO:0090669","terms_by_termid":{"GO:0090669":null}}


id: PBO:0051072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-24 (non-functional)","termid":"PBO:0051072"}


id: MOD:01595
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-114 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01595"}


id: MONDO:0022737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This is an X-linked recessive retinal degenerative disease that leads to degeneration of the choriocapillaris, the retinal pigment epithelium, and the photoreceptor of the eye. Hypopituitarism is the decreased (hypo) secretion of one or more of the eight hormones normally produced by the pituitary gland at the base of the brain.","direct_ancestors":[{"relation_name":"is_a","term_name":"choroideremia","termid":"MONDO:0010557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"choroideremia hypopituitarism","secondary_identifiers":["Orphanet:1434","SCTID:715417002"],"synonyms":[{"name":"CHM-hypopituitarism syndrome","type":"exact"},{"name":"choroideraemia co-occurrent with hypopituitarism","type":"related"},{"name":"choroideraemia hypopituitarism","type":"related"},{"name":"choroideremia co-occurrent with hypopituitarism","type":"related"},{"name":"choroideremia hypopituitarism","type":"exact"}],"termid":"MONDO:0022737","xrefs":{"Monarch":{"xref_id":"0022737"}}}


id: GO:1904997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","PMID:22267480","GO_REF:0000058","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"}


id: SO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains a mutation involving the deletion or insertion of one or more bases, where this number is not divisible by 3.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift","secondary_identifiers":["http://en.wikipedia.org/wiki/Frameshift"],"termid":"SO:0000865"}


id: GO:1904820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","PMID:15840053","GO_REF:0000094","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous membrane development","termid":"GO:1904817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peritoneum development","synonyms":[{"name":"peritonaeum development","type":"related"}],"termid":"GO:1904820"}


id: GO:0003231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac ventricle over time, from its formation to the mature structure. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac ventricle development","termid":"GO:0003231"}


id: PBO:0069631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 908, pseudogene","termid":"PBO:0069631"}


id: PBO:0028874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_RNA_binding","termid":"PBO:0028874"}


id: MONDO:0012061
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859173"}]},"cv_name":"mondo","definition":"Sick sinus syndrome is a rare cardiac rhythm disease, usually of the elderly, characterized by electrocardiographic findings of sinus bradycardia, atrial fibrillation, atrial tachycardia sinus arrest, or sino-atrial block, and that manifest with symptoms like syncope, dizziness, palpitations, fatigue, or even heart failure. It results from malfunction of the cardiac conduction system, probably secondary to degenerative fibrosis of nodal tissue in the elderly or secondary to cardiac disorders in younger patients.","definition_xrefs":["Orphanet:166282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sick sinus syndrome","termid":"MONDO:0001823"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial sick sinus syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1495462959","MedDRA:10040639","MEDGEN:573766","MESH:C563907","GARD:13663","OMIMPS:608567","UMLS:C0340491","SCTID:233913007"],"synonyms":[{"name":"SSS1","type":"related"},{"name":"familial sinus node dysfunction","type":"exact"},{"name":"hereditary sick sinus syndrome","type":"exact"},{"name":"sick sinus syndrome 1, autosomal recessive","type":"related"}],"termid":"MONDO:0012061","terms_by_termid":{"MONDO:0859173":null},"xrefs":{"Monarch":{"xref_id":"0012061"}}}


id: GO:0010030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increase the rate of seed germination.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed germination","termid":"GO:0010029"},{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"positively_regulates","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed germination","synonyms":[{"name":"activation of seed germination","type":"narrow"},{"name":"stimulation of seed germination","type":"narrow"},{"name":"up regulation of seed germination","type":"exact"},{"name":"up-regulation of seed germination","type":"exact"},{"name":"upregulation of seed germination","type":"exact"}],"termid":"GO:0010030"}


id: PBO:0116595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXIM2 antisense RNA 2","termid":"PBO:0116595"}


id: MONDO:0800478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by an uncommon and relatively unknown cause of facial ulceration that occurs after damage to the trigeminal nerve. It characteristically involves non-healing facial ulceration(s) with accompanying anesthesia, paresthesia, and dysesthesia along the distribution of a trigeminal dermatome.","definition_xrefs":["PMID:37089852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal trophic syndrome","secondary_identifiers":["icd11.foundation:983392135","MEDGEN:698241","Orphanet:664901","UMLS:C1274928"],"synonyms":[{"name":"TTS","type":"exact"}],"termid":"MONDO:0800478","xrefs":{"Monarch":{"xref_id":"0800478"}}}


id: MONDO:0021005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental disorder characterized by facial, limbs and genital features, and a disproportionate acromelic short stature. This includes X-linked, AR and AD forms of Aarskog syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faciodigitogenital syndrome","secondary_identifiers":["MedDRA:10067148","Orphanet:915","DOID:0111824","GARD:4775"],"synonyms":[{"name":"Aarskog syndrome","type":"narrow"},{"name":"Aarskog-Scott syndrome","type":"narrow"},{"name":"faciogenital dysplasia","type":"related"}],"termid":"MONDO:0021005","xrefs":{"Monarch":{"xref_id":"0021005"}}}


id: PBO:0069692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 971, pseudogene","termid":"PBO:0069692"}


id: MONDO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the subglottic area of the larynx. The vast majority of cases are squamous cell carcinomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subglottis neoplasm","termid":"MONDO:0000933"},{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"subglottis cancer","secondary_identifiers":["NCIT:C3546","ICD9:161.2","DOID:11472","MEDGEN:57562","SCTID:363430007","UMLS:C0153485","ICD10CM:C32.2"],"synonyms":[{"name":"Ca larynx - subglottis","type":"exact"},{"name":"cancer of subglottis","type":"exact"},{"name":"malignant neoplasm of subglottis","type":"exact"},{"name":"malignant neoplasm of the subglottis","type":"exact"},{"name":"malignant subglottic neoplasm","type":"exact"},{"name":"malignant subglottic tumor","type":"exact"},{"name":"malignant subglottic tumour","type":"exact"},{"name":"malignant subglottis neoplasm","type":"exact"},{"name":"malignant subglottis tumor","type":"exact"},{"name":"malignant subglottis tumour","type":"exact"},{"name":"malignant tumor of subglottis","type":"exact"},{"name":"malignant tumor of the subglottis","type":"exact"},{"name":"malignant tumour of subglottis","type":"exact"},{"name":"malignant tumour of the subglottis","type":"exact"},{"name":"subglottis cancer","type":"exact"}],"termid":"MONDO:0001293","xrefs":{"Monarch":{"xref_id":"0001293"}}}


id: FYPO:0004041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a primary amine oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal primary amine oxidase activity","termid":"FYPO:0004041"}


id: PBO:0029208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_ubiquitination","termid":"PBO:0029208"}


id: GO:1904644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a curcumin stimulus.","definition_xrefs":["PMID:24755072","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to curcumin","termid":"GO:1904643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to curcumin","termid":"GO:1904644"}


id: PBO:0085102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein putative transcription factor; required for growth of superficial pseudohyphae (which do not invade the agar substrate) but not for invasive pseudohyphal growth; may act together with Phd1p; potential Cdc28p substrate","termid":"PBO:0085102"}


id: GO:0061517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a macrophage population by cell division.","definition_xrefs":["GOC:dph","PMID:12614284","PMID:19466391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage proliferation","termid":"GO:0061517"}


id: PBO:0004064
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.4.1.5","termid":"PBO:0004064"}


id: PBO:0049718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4","termid":"PBO:0049718"}


id: GO:0090594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The immediate defensive reaction by vertebrate tissue to injury caused by chemical or physical agents.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"},{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response to wounding","termid":"GO:0090594"}


id: PBO:0064598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox 1","termid":"PBO:0064598"}


id: MOD:01221
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-formyl-L-threonine.","definition_xrefs":["PubMed:11861642","PubMed:15799070","Unimod:122#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-formyl-L-threonine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01221"}


id: GO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + taurolithocholate = adenosine 3',5'-bisphosphate + taurolithocholate sulfate.","definition_xrefs":["EC:2.8.2.14","MetaCyc:BILE-SALT-SULFOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"bile-salt sulfotransferase activity","secondary_identifiers":["RHEA:14013"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:glycolithocholate sulfotransferase activity","type":"related"},{"name":"BAST I activity","type":"narrow"},{"name":"bile acid sulfotransferase I activity","type":"narrow"},{"name":"bile acid:3'-phosphoadenosine-5'-phosphosulfate sulfotransferase activity","type":"related"},{"name":"bile salt:3'phosphoadenosine-5'-phosphosulfate:sulfotransferase activity","type":"related"},{"name":"bile-salt sulphotransferase activity","type":"exact"},{"name":"glycolithocholate sulfotransferase activity","type":"narrow"}],"termid":"GO:0047704"}


id: MONDO:0010499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ritscher-Schinzel syndrome in which the cause of the disease is a mutation in the CCDC22 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ritscher-Schinzel syndrome","termid":"MONDO:0019078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome 2","secondary_identifiers":["UMLS:C4225419","MEDGEN:897005","OMIM:300963","GARD:15278","DOID:0060572"],"synonyms":[{"name":"CCDC22 Ritscher-Schinzel syndrome","type":"exact"},{"name":"RTSC2","type":"exact"},{"name":"Ritscher-Schinzel syndrome 2","type":"exact"},{"name":"Ritscher-Schinzel syndrome 2, X-linked recessive","type":"exact"},{"name":"Ritscher-Schinzel syndrome caused by mutation in CCDC22","type":"exact"},{"name":"Ritscher-Schinzel syndrome type 2","type":"exact"}],"termid":"MONDO:0010499","xrefs":{"Monarch":{"xref_id":"0010499"}}}


id: PBO:0044751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD-box helicase 39A","termid":"PBO:0044751"}


id: PBO:0085469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prephenate dehydratase; catalyzes the conversion of prephanate to phenylpyruvate, which is a step in the phenylalanine biosynthesis pathway","termid":"PBO:0085469"}


id: PBO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 pseudogene 4","termid":"PBO:0060856"}


id: PBO:0076608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D26 antisense RNA 1","termid":"PBO:0076608"}


id: PBO:0042637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 12 pseudogene","termid":"PBO:0042637"}


id: PBO:0060377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYBPC2 cis regulating lncRNA enhancer of myogenesis","termid":"PBO:0060377"}


id: PBO:0051397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 5 (non-functional)","termid":"PBO:0051397"}


id: PBO:0091703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of chronological lifespan protein Ecl2","termid":"PBO:0091703"}


id: GO:0030789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin 4.","definition_xrefs":["EC:2.1.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"precorrin-3B C17-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.131-RXN","RHEA:12761"],"synonyms":[{"name":"CobJ","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-3B C17-methyltransferase activity","type":"related"},{"name":"precorrin-3 methylase activity","type":"related"},{"name":"precorrin-3 methyltransferase activity","type":"related"}],"termid":"GO:0030789"}


id: PBO:0017845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transmembrane transporter Cat1","termid":"PBO:0017845"}


id: PBO:0120474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDI proteasomal shuttling factor 2","termid":"PBO:0120474"}


id: MONDO:0020096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of isolated diffuse palmoplantar keratoderma.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive isolated diffuse palmoplantar keratoderma (obsolete MONDO:0020096)","secondary_identifiers":["Orphanet:98356"],"synonyms":[{"name":"autosomal recessive isolated diffuse palmoplantar hyperkeratosis","type":"exact"},{"name":"isolated diffuse palmoplantar keratoderma, autosomal recessive","type":"exact"}],"termid":"MONDO:0020096","xrefs":{"Monarch":{"xref_id":"0020096"}}}


id: GO:0004106
data:
  {"annotated_genes":["SJAG_00518"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76858],"is_not":false,"summary":null,"term":"GO:0004106"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = prephenate.","definition_xrefs":["RHEA:13897","EC:5.4.99.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chorismate mutase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01715","MetaCyc:CHORISMATEMUT-RXN"],"synonyms":[{"name":"chorismate pyruvatemutase activity","type":"related"},{"name":"hydroxyphenylpyruvate synthase activity","type":"broad"}],"termid":"GO:0004106","terms_by_termid":{"GO:0004106":null}}


id: PBO:0059990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 10","termid":"PBO:0059990"}


id: GO:0030837
data:
  {"annotated_genes":["SJAG_01894","SJAG_01993","SJAG_00279","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94272,81020,77432,82069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of actin polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament polymerization","termid":"GO:0030833"},{"relation_name":"is_a","term_name":"negative regulation of protein polymerization","termid":"GO:0032272"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"actin filament polymerization","termid":"GO:0030041"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0065003","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin filament polymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of actin filament polymerization","type":"exact"},{"name":"down-regulation of actin filament polymerization","type":"exact"},{"name":"downregulation of actin filament polymerization","type":"exact"},{"name":"inhibition of actin filament polymerization","type":"narrow"},{"name":"negative regulation of actin polymerization","type":"exact"},{"name":"negative regulation of actin polymerization and/or depolymerization","type":"broad"}],"termid":"GO:0030837","terms_by_termid":{"GO:0051016":null}}


id: SO:0001203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001203 RNA_polymerase_promoter (obsolete SO:0001203)","synonyms":[{"name":"RNA polymerase promoter","type":"exact"}],"termid":"SO:0001203"}


id: PBO:0027956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pyridoxine:NADP_4-dehydrogenase_activity","termid":"PBO:0027956"}


id: MONDO:1012466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"perinatal weak calf syndrome, non-human animal","termid":"MONDO:1011786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perinatal weak calf syndrome, cattle","secondary_identifiers":["OMIA:001817-9913"],"termid":"MONDO:1012466","xrefs":{"Monarch":{"xref_id":"1012466"}}}


id: MONDO:0043905
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"}]},"cv_name":"mondo","definition":"An inflammatory process affecting the lung parenchyma. It is a milder form of lung inflammation compared to pneumonia.","definition_xrefs":["NCIT:C113159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"pneumonitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1001991","SCTID:205237003","MEDGEN:811420","UMLS:C3714636","icd11.foundation:1324545867"],"synonyms":[{"name":"inflammation of lung parenchyma","type":"exact"},{"name":"lung parenchyma inflammation","type":"exact"},{"name":"pneumonitis","type":"exact"}],"termid":"MONDO:0043905","terms_by_termid":{"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0043905"}}}


id: GO:0043744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-2-aminoadipate = ADP + N-acetyl-L-2-aminoadipate 6-phosphate.","definition_xrefs":["RHEA:41944","PMID:25392000","PMID:26966182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"N2-acetyl-L-aminoadipate kinase activity","secondary_identifiers":["GO:0043868","MetaCyc:RXN-5182"],"synonyms":[{"name":"N-acetyl-L-aminoadipate 5-phosphotransferase activity","type":"exact"},{"name":"N-acetylaminoadipate kinase activity","type":"exact"},{"name":"[LysW]-aminoadipate kinase","type":"related"},{"name":"acetylaminoadipate kinase activity","type":"exact"}],"termid":"GO:0043744"}


id: PBO:0031556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_catalytic_activity","termid":"PBO:0031556"}


id: GO:0044051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via cytolysis of symbiont cells. Cytolysis is the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by symbiont cytolysis (obsolete GO:0044051)","synonyms":[{"name":"interaction with host via substance released by cytolysis of symbiont","type":"exact"}],"termid":"GO:0044051"}


id: MONDO:0007831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insect Stings, hypersensitivity to","secondary_identifiers":["UMLS:C1840171","MEDGEN:327045","OMIM:147540"],"synonyms":[{"name":"insect Stings, hypersensitivity to","type":"exact"}],"termid":"MONDO:0007831","xrefs":{"Monarch":{"xref_id":"0007831"}}}


id: GO:0051667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a plastid to a specific location in the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid localization","termid":"GO:0051644"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of plastid localization","synonyms":[{"name":"establishment of plastid localisation","type":"exact"}],"termid":"GO:0051667"}


id: GO:1903889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plant epidermal cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:123345","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of plant epidermal cell differentiation","termid":"GO:1903888"},{"relation_name":"negatively_regulates","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plant epidermal cell differentiation","synonyms":[{"name":"down regulation of plant epidermal cell differentiation","type":"exact"},{"name":"down-regulation of plant epidermal cell differentiation","type":"exact"},{"name":"downregulation of plant epidermal cell differentiation","type":"exact"},{"name":"inhibition of plant epidermal cell differentiation","type":"narrow"}],"termid":"GO:1903889"}


id: PBO:0061309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 1","termid":"PBO:0061309"}


id: PBO:0040359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 8","termid":"PBO:0040359"}


id: PBO:0083124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichyl-phosphoglucose-dependent alpha-1,2-glucosyltransferase; located in the ER; functions in pathway that synthesizes the dolichol-linked oligosaccharide precursor for N-linked protein glycosylation; has a role in regulation of ITR1 and INO1; human homolog ALG10B can complement yeast die2 null mutant","termid":"PBO:0083124"}


id: GO:0010247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a phosphate ion stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of phosphate ion","synonyms":[{"name":"phosphate ion detection","type":"exact"},{"name":"phosphate ion perception","type":"related"},{"name":"phosphate ion sensing","type":"related"}],"termid":"GO:0010247"}


id: PBO:0042667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 1","termid":"PBO:0042667"}


id: PR:O14195
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56E4.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C56E4.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.07","synonyms":[{"name":"Spom972h-SPAC56E4.07","type":"exact"}],"termid":"PR:O14195"}


id: PBO:0002964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family helicase Ino80","termid":"PBO:0002964"}


id: PR:O14261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg11 gene.","definition_xrefs":["UniProtKB:O14261","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taz1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.04","synonyms":[{"name":"Spom972h-atg11","type":"exact"},{"name":"autophagy-related protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytoplasm to vacuole targeting protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein taf1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14261"}


id: FYPO:0007455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via single-strand annealing is increased.","definition_xrefs":["PomBase:mah","GO:0045002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"increased double-strand break repair via single-strand annealing","synonyms":[{"name":"increased double-strand break repair via SSA","type":"exact"},{"name":"increased double-strand break repair via single-strand annealing during mitotic cell cycle","type":"related"},{"name":"increased double-strand break repair via single-strand annealing during vegetative growth","type":"exact"},{"name":"increased error-prone double strand break repair","type":"broad"}],"termid":"FYPO:0007455"}


id: PBO:0055809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 4","termid":"PBO:0055809"}


id: FYPO:0007836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal at subtelomeric regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:31837996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased nucleosome occupancy at subtelomere","synonyms":[{"name":"increased nucleosome occupancy at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at subtelomere during vegetative growth","type":"exact"}],"termid":"FYPO:0007836"}


id: GO:0098753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of gene products and protein complexes with covalently attached hydrophobic anchors products that penetrate only the cytoplasmic side of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of the cytoplasmic side of the plasma membrane (obsolete GO:0098753)","termid":"GO:0098753"}


id: PATO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is borderline in it its effect or force as compared to baseline or normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borderline intensity","termid":"PATO:0002628"}


id: GO:1904399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to heparan sulfate.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:8567685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heparan sulfate binding","termid":"GO:1904399"}


id: PBO:0066317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPMS2 pseudogene 1","termid":"PBO:0066317"}


id: PATO:0000858
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000858 ocular reflex value (obsolete PATO:0000858)","termid":"PATO:0000858"}


id: MONDO:0004584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity pneumonitis associated with the inhalation of fungal spores of Cryptostroma corticale in workers stripping the bark from maple and sycamore logs affected by sooty bark disease.","definition_xrefs":["MEDGEN:510126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"},{"relation_name":"is_a","term_name":"fungal lung infectious disease","termid":"MONDO:0005766"},{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"},{"relation_name":"is_a","term_name":"occupational lung disease","termid":"MONDO:0022736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"maple bark strippers' lung","secondary_identifiers":["SCTID:86638007","ICD10CM:J67.6","DOID:8484","ICD9:495.6","UMLS:C0155890"],"synonyms":[{"name":"alveolitis due to cryptostroma corticale","type":"exact"},{"name":"maple bark disease","type":"exact"},{"name":"maple bark stripper's disease","type":"exact"},{"name":"maple bark stripper's lung","type":"exact"},{"name":"maple bark-strippers' lung","type":"exact"},{"name":"maple-bark strippers' lung","type":"exact"}],"termid":"MONDO:0004584","xrefs":{"Monarch":{"xref_id":"0004584"}}}


id: GO:0042200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanuric acid, a potential degradation product of triazine herbicides.","definition_xrefs":["UM-BBD_pathwayID:cya"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanuric acid metabolic process","termid":"GO:0042199"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanuric acid catabolic process","synonyms":[{"name":"cyanuric acid breakdown","type":"exact"},{"name":"cyanuric acid catabolism","type":"exact"},{"name":"cyanuric acid degradation","type":"exact"}],"termid":"GO:0042200"}


id: GO:0098927
data:
  {"annotated_genes":["SJAG_01309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045022"}]},"cv_name":"biological_process","definition":"A cellular transport process in which transported substances are moved in membrane-bounded vesicles between endosomal compartments, e.g, between early endosome and sorting endosome.","definition_xrefs":["GOC:dos","PMID:10930469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"vesicle-mediated transport between endosomal compartments","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0098927","terms_by_termid":{"GO:0045022":null}}


id: MONDO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"},{"relation_name":"is_a","term_name":"cranial nerve palsy","termid":"MONDO:0002782"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple cranial nerve palsy","secondary_identifiers":["MEDGEN:509636","SCTID:78152008","DOID:13866","ICD9:352.6","UMLS:C0154733"],"synonyms":[{"name":"multiple cranial nerve palsies","type":"exact"}],"termid":"MONDO:0001819","xrefs":{"Monarch":{"xref_id":"0001819"}}}


id: MONDO:0010512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked, syndromic, Bain type","secondary_identifiers":["OMIM:300986","MEDGEN:934781","GARD:13442","Orphanet:662198","DOID:0070538","UMLS:C4310814"],"synonyms":[{"name":"MRXSB","type":"exact"},{"name":"intellectual developmental disorder, X-linked, syndromic, Bain type, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Bain type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Bain type","type":"exact"}],"termid":"MONDO:0010512","xrefs":{"Monarch":{"xref_id":"0010512"}}}


id: PBO:0061967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AG member 1","termid":"PBO:0061967"}


id: MONDO:0100624
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[88671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008201"}]},"cv_name":"mondo","definition":"Any neurodegenerative disorder in which the cause of the disease is a mutation in the DCTN1 gene.","definition_xrefs":["PMID:20945553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"DCTN1-related neurodegeneration","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"DCTN1-RD","type":"broad"},{"name":"DCTN1-related disorder","type":"broad"}],"termid":"MONDO:0100624","terms_by_termid":{"MONDO:0008201":null,"MONDO:0011879":null},"xrefs":{"Monarch":{"xref_id":"0100624"}}}


id: GO:0061240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric nephron tubule are generated and organized. A mesonephric nephron tubule is an epithelial tube that is part of the mesonephric nephron, the functional part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"}


id: PBO:0068690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 71, pseudogene","termid":"PBO:0068690"}


id: MONDO:0020592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the pharynx. Representative examples include pharyngitis and carcinoma.","definition_xrefs":["NCIT:C26850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of pharynx","secondary_identifiers":["MEDGEN:10691","UMLS:C0031345","SCTID:75860007"],"synonyms":[{"name":"chordate pharynx disease","type":"exact"},{"name":"chordate pharynx disease or disorder","type":"exact"},{"name":"disease of chordate pharynx","type":"exact"},{"name":"disease or disorder of chordate pharynx","type":"exact"},{"name":"disorder of chordate pharynx","type":"exact"},{"name":"pharyngeal disease","type":"exact"},{"name":"pharyngeal disorder","type":"exact"}],"termid":"MONDO:0020592","xrefs":{"Monarch":{"xref_id":"0020592"}}}


id: MONDO:0003839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm of the ovary with an invasive epithelial component and a fibrotic stroma. The epithelial component is characterized by the presence of malignant epithelial cells with intracytoplasmic mucin. Cystic spaces are also present which contain mucoid material.","definition_xrefs":["NCIT:C40034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinofibroma","termid":"MONDO:0002991"},{"relation_name":"is_a","term_name":"mucinous ovarian cancer","termid":"MONDO:0024282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian mucinous adenocarcinofibroma","secondary_identifiers":["MEDGEN:384497","ICDO:9015/3","UMLS:C2212014","DOID:6278"],"synonyms":[{"name":"ovarian mucinous adenocarcinofibroma","type":"exact"},{"name":"ovarian mucinous malignant adenofibroma","type":"exact"}],"termid":"MONDO:0003839","xrefs":{"Monarch":{"xref_id":"0003839"}}}


id: MONDO:0025013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of animals within the order primates. This term includes diseases of Haplorhini and Strepsirhini.","definition_xrefs":["MESH:D018419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-human primate disease","synonyms":[{"name":"Primate disease","type":"related"},{"name":"disease, Primate","type":"related"},{"name":"diseases, Primate","type":"related"}],"termid":"MONDO:0025013","xrefs":{"Monarch":{"xref_id":"0025013"}}}


id: PBO:0028643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028643"}


id: GO:0043040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in nonribosomal peptide synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"},{"relation_name":"is_a","term_name":"amino acid activation for nonribosomal peptide biosynthetic process","termid":"GO:0043041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"tRNA aminoacylation for nonribosomal peptide biosynthetic process","synonyms":[{"name":"tRNA aminoacylation for nonribosomal peptide anabolism","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide biosynthesis","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide formation","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide synthesis","type":"exact"}],"termid":"GO:0043040"}


id: PBO:0013464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Erf2","termid":"PBO:0013464"}


id: GO:1903664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asexual reproduction.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24390142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asexual reproduction","termid":"GO:1903664"}


id: PBO:0042105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 178","termid":"PBO:0042105"}


id: PBO:0047273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCD2 and FANCI associated nuclease 1","termid":"PBO:0047273"}


id: GO:0033445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"AGU codon-amino acid adaptor activity","synonyms":[{"name":"AGT codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033445"}


id: GO:0060402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ions (Ca2+) into the cytosol.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"},{"relation_name":"is_a","term_name":"calcium ion transmembrane import into cytosol","termid":"GO:0097553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"calcium ion transport into cytosol","termid":"GO:0060402"}


id: FYPO:0007048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is normal (i.e. indistinguishable from wild type) during a cellular stress response to zinc ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alkaline phosphatase activity","termid":"FYPO:0007047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal alkaline phosphatase activity during stress response to zinc ion","synonyms":[{"name":"normal alkaline phosphatase activity during cellular response to excess zinc","type":"exact"},{"name":"normal alkaline phosphatase activity during cellular response to high zinc level","type":"exact"},{"name":"normal alkaline phosphatase activity during cellular response to replete zinc","type":"related"},{"name":"normal alkaline phosphatase activity during cellular stress response to zinc ion","type":"exact"},{"name":"normal alkaline phosphatase activity during response to zinc ion stress","type":"exact"},{"name":"normal alkaline phosphatase activity during response to zinc toxicity","type":"related"},{"name":"normal alkaline phosphatase activity during stress response to zinc","type":"broad"}],"termid":"FYPO:0007048"}


id: GO:0140870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of RNA polymerase.","definition_xrefs":["PMID:18313387","PMID:31048766","PMID:15300239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772","GO:0140678","GO:0004857"],"is_obsolete":false,"name":"RNA polymerase inhibitor activity","termid":"GO:0140870"}


id: SO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which does not cause a disruption of the translational reading frame.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_altering_variant","termid":"SO:0001818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_variant","synonyms":[{"name":"ANNOVAR:nonframeshift block substitution","type":"related"},{"name":"ANNOVAR:nonframeshift substitution","type":"related"},{"name":"VAAST:inframe_variant","type":"exact"},{"name":"cds-indel","type":"exact"},{"name":"inframe variant","type":"exact"}],"termid":"SO:0001650"}


id: FYPO:0001935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of proton-transporting ATP synthase activity by a rotational mechanism is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0002114","FYPO:0000002","FYPO:0000138","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0005447"],"is_obsolete":false,"name":"abnormal proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"abnormal hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"abnormal mitochondrial proton-transporting ATP synthase activity","type":"narrow"},{"name":"abnormal proton-transporting ATP synthase activity","type":"related"}],"termid":"FYPO:0001935"}


id: PBO:0052211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ5 divergent transcript","termid":"PBO:0052211"}


id: MONDO:0003668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"seminoma","termid":"MONDO:0003001"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extragonadal seminoma","secondary_identifiers":["DOID:5838","MEDGEN:234243","NCIT:C7327","UMLS:C1333502"],"synonyms":[{"name":"extragonadal primary seminoma","type":"exact"},{"name":"extragonadal seminoma","type":"exact"},{"name":"primary extragonadal seminoma","type":"exact"}],"termid":"MONDO:0003668","xrefs":{"Monarch":{"xref_id":"0003668"}}}


id: GO:2000966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell wall polysaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cell wall polysaccharide catabolic process","synonyms":[{"name":"regulation of cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000966"}


id: PBO:0045141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 10","termid":"PBO:0045141"}


id: GO:0030474
data:
  {"annotated_genes":["SJAG_04003","SJAG_04558","SJAG_01760","SJAG_03544","SJAG_03200"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109402,117123,92075,114635,114838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"}]},"cv_name":"biological_process","definition":"Construction of a new spindle pole body.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01760":null,"SJAG_03200":null,"SJAG_03544":null,"SJAG_04003":null,"SJAG_04558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"spindle pole body duplication","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031046","GO:0007103"],"synonyms":[{"name":"spindle pole body assembly","type":"exact"},{"name":"spindle pole body biogenesis","type":"exact"},{"name":"spindle pole body biosynthesis","type":"exact"},{"name":"spindle pole body duplication associated with nuclear envelope","type":"exact"},{"name":"spindle pole body duplication in cytoplasm","type":"exact"},{"name":"spindle pole body formation","type":"exact"},{"name":"spindle pole body replication","type":"exact"}],"termid":"GO:0030474","terms_by_termid":{"GO:1903087":null}}


id: PBO:0029577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation_at_Thr-Pro_site","termid":"PBO:0029577"}


id: FYECO:0000294
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a high temperature followed by growth at low temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, high to low","termid":"FYECO:0000294"}


id: PBO:0068047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 352","termid":"PBO:0068047"}


id: PBO:0004874
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates cdc15","termid":"PBO:0004874"}


id: GO:0141185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular adaptor recognizes and binds a target protein containing a UFM1 modification and brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:38383785","PMID:38383789","PMID:32537488","PMID:36848233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein reader activity","termid":"GO:0140035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"UFM1-modified protein reader activity","synonyms":[{"name":"UFM1 modified protein reader activity","type":"exact"},{"name":"UFM1-dependent protein binding","type":"exact"}],"termid":"GO:0141185"}


id: SO:0001635
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 5KB 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upstream_gene_variant","termid":"SO:0001631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5KB_upstream_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"5kb upstream variant","type":"exact"},{"name":"Seattleseq:upstream-gene","type":"exact"},{"name":"upstream","type":"exact"}],"termid":"SO:0001635"}


id: PBO:0029798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_thick,_misoriented_actin_cables","termid":"PBO:0029798"}


id: PBO:0028271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_malate_dehydrogenase_(decarboxylating)_(NAD+)_activity","termid":"PBO:0028271"}


id: GO:0017187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.","definition_xrefs":["RESID:AA0032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"protein carboxylation","termid":"GO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamic acid carboxylation","secondary_identifiers":["Reactome:R-HSA-159854"],"termid":"GO:0017187"}


id: MONDO:1012533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"calvarial hyperostotic syndrome, non-human animal","termid":"MONDO:1011658"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calvarial hyperostotic syndrome, lion","secondary_identifiers":["OMIA:002245-9689"],"termid":"MONDO:1012533","xrefs":{"Monarch":{"xref_id":"1012533"}}}


id: GO:0009964
data:
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id: GO:0044833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of protein transport in its host organism.","definition_xrefs":["PMID:22334672","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein transport (obsolete GO:0044833)","termid":"GO:0044833"}


id: MONDO:0015392
data:
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id: PBO:0068084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 390","termid":"PBO:0068084"}


id: GO:0042254
data:
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id: PBO:0080332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 96 pseudogene","termid":"PBO:0080332"}


id: PBO:0005774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1 (predicted)","termid":"PBO:0005774"}


id: GO:0031227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of endoplasmic reticulum membrane (obsolete GO:0031227)","synonyms":[{"name":"intrinsic to endoplasmic reticulum membrane","type":"narrow"}],"termid":"GO:0031227"}


id: GO:0021716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the inferior olivary nucleus structure. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"medulla oblongata structural organization","termid":"GO:0021581"},{"relation_name":"part_of","term_name":"inferior olivary nucleus morphogenesis","termid":"GO:0021714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus structural organization","synonyms":[{"name":"inferior olivary nucleus structural organisation","type":"exact"},{"name":"inferior olive structural organization","type":"related"}],"termid":"GO:0021716"}


id: GO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits of the regulatory particle that directly associate with the core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle, base subcomplex (obsolete GO:0031611)","termid":"GO:0031611"}


id: PBO:0071323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 7","termid":"PBO:0071323"}


id: FYPO:0008104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cortical endoplasmic reticulum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:36799444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0006378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to cortical endoplasmic reticulum","termid":"FYPO:0008104"}


id: PBO:0031749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_methylation","termid":"PBO:0031749"}


id: GO:1905484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron migration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16516839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of motor neuron migration","termid":"GO:1905483"},{"relation_name":"is_a","term_name":"negative regulation of neuron migration","termid":"GO:2001223"},{"relation_name":"negatively_regulates","term_name":"motor neuron migration","termid":"GO:0097475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of motor neuron migration","synonyms":[{"name":"down regulation of motor neuron migration","type":"exact"},{"name":"down-regulation of motor neuron migration","type":"exact"},{"name":"downregulation of motor neuron migration","type":"exact"},{"name":"inhibition of motor neuron migration","type":"narrow"}],"termid":"GO:1905484"}


id: GO:0038067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038067)","synonyms":[{"name":"MAP kinase activity involved in cell wall biogenesis","type":"narrow"},{"name":"MAP kinase activity involved in cell wall integrity","type":"related"},{"name":"MAPK activity involved in cell wall biogenesis","type":"narrow"}],"termid":"GO:0038067"}


id: PBO:0041289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1r subcomponent like","termid":"PBO:0041289"}


id: PBO:0089611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit C, Pcf3","termid":"PBO:0089611"}


id: MONDO:0015847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare vaginal malformation (obsolete MONDO:0015847)","secondary_identifiers":["Orphanet:180151"],"termid":"MONDO:0015847","xrefs":{"Monarch":{"xref_id":"0015847"}}}


id: PATO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having an empty space or cavity within.","direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hollow","termid":"PATO:0002078"}


id: PBO:0002479
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.8","termid":"PBO:0002479"}


id: PBO:0088839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog4","termid":"PBO:0088839"}


id: PBO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase (predicted)","termid":"PBO:0000864"}


id: SO:0000631
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding for more than one gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"polycistronic_transcript","termid":"SO:0000078"},{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_primary_transcript","synonyms":[{"name":"polycistronic primary transcript","type":"exact"}],"termid":"SO:0000631"}


id: PBO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored cell surface protein involved in ascospore wall assembly Meu10","termid":"PBO:0005678"}


id: GO:2001276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of L-leucine biosynthetic process","synonyms":[{"name":"regulation of L-leucine anabolism","type":"exact"},{"name":"regulation of L-leucine biosynthesis","type":"exact"},{"name":"regulation of L-leucine formation","type":"exact"},{"name":"regulation of L-leucine synthesis","type":"exact"},{"name":"regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001276"}


id: PBO:0056863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence A","termid":"PBO:0056863"}


id: MONDO:0020470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"49,XYYYY is a rare Y chromosome number anomaly with a variable phenotype mainly characterized by moderate to severe intellectual disability, speech delay, hypotonia, and mild dysmorphic features, including facial asymmetry, hypertelorism, bilateral low set 'lop' ears, and micrognatia. Skeletal abnormalities (such as skull deformities, radioulnar synostosis, elbow flexion, clinodactyly, brachydactyly) and behavourial problems have also been associated with this condition. Genitalia are normal at birth, although hypogonadism and azoospermia has been reported in adults.","definition_xrefs":["Orphanet:99330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"},{"relation_name":"is_a","term_name":"pentasomy","termid":"MONDO:0700085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"49,XYYYY syndrome","secondary_identifiers":["SCTID:734028007","GARD:19679","UMLS:C4518342","MEDGEN:1384259"],"termid":"MONDO:0020470","xrefs":{"Monarch":{"xref_id":"0020470"}}}


id: PATO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being strongly articulated with another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articulated with","termid":"PATO:0002278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tightly articulated with","termid":"PATO:0002279"}


id: GO:1904011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an Aroclor 1254 stimulus.","definition_xrefs":["GOC:TermGenie","PMID:18602130","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to Aroclor 1254","termid":"GO:1904010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Aroclor 1254","termid":"GO:1904011"}


id: MONDO:0957999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 80, with variant lissencephaly","secondary_identifiers":["MEDGEN:1850178","OMIM:620653","UMLS:C5882733"],"termid":"MONDO:0957999","xrefs":{"Monarch":{"xref_id":"0957999"}}}


id: GO:0160237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-alanyl-D-alanine + H2O = 2 D-alanine.","definition_xrefs":["PMID:7873524","RHEA:20661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dipeptidase activity","termid":"GO:0016805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016787","GO:0008233","GO:0003824"],"is_obsolete":false,"name":"D-Ala-D-Ala dipeptidase activity","secondary_identifiers":["EC:3.4.13.22"],"synonyms":[{"name":"D-alanyl-D-alanine dipeptidase activity","type":"exact"}],"termid":"GO:0160237"}


id: GO:0004589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + NAD+ = H+ + NADH + orotate.","definition_xrefs":["RHEA:13513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.3.1.14","KEGG_REACTION:R01869","MetaCyc:OROTATE-REDUCTASE-NADH-RXN"],"synonyms":[{"name":"(S)-dihydroorotate:NAD+ oxidoreductase activity","type":"related"},{"name":"orotate reductase (NADH) activity","type":"exact"}],"termid":"GO:0004589"}


id: PBO:0045333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK8 antisense RNA 2","termid":"PBO:0045333"}


id: GO:0022842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that may be gated or ungated.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"narrow pore channel activity","termid":"GO:0022842"}


id: PBO:0091841
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A replaces histone H3 in new nucleosomes at centromeres during mitotic G2 phase","termid":"PBO:0091841"}


id: PBO:0041653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 3","termid":"PBO:0041653"}


id: MONDO:0025956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ovarian remnant syndrome (ORS) is characterized by the presence of residual ovarian tissue after a woman has had surgery to remove one ovary or both ovaries (oophorectomy). Signs and symptoms may include pelvic pain, a pelvic mass, or the absence of menopause after oophorectomy. The condition may be caused by surgical factors leading to incomplete removal of ovarian tissue, including factors that limit surgical exposure of the ovary or compromise surgical technique. Factors may include pelvic adhesions (limiting ability to see the ovary or causing it to adhere to other tissues); anatomic variations; bleeding during surgery; or poor surgical technique. Treatment is indicated for people with symptoms and typically involves surgery to remove the residual tissue. Therapy for those who refuse surgery, cannot have surgery, or do not have a pelvic mass may include hormonal therapy to suppress ovarian function.","definition_xrefs":["GARD:0007297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian remnant syndrome","secondary_identifiers":["icd11.foundation:584962583","UMLS:C5886744","MEDGEN:1856973"],"termid":"MONDO:0025956","xrefs":{"Monarch":{"xref_id":"0025956"}}}


id: PBO:0078342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 8-1","termid":"PBO:0078342"}


id: MONDO:0859376
data:
  {"annotated_genes":["SJAG_02447","SJAG_02589"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89237,89238],"is_not":false,"summary":null,"term":"MONDO:0859376"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02447":null,"SJAG_02589":null},"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, congenital, 5, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1840908","UMLS:C5830272","OMIM:620241"],"termid":"MONDO:0859376","terms_by_termid":{"MONDO:0859376":null},"xrefs":{"Monarch":{"xref_id":"0859376"}}}


id: GO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microcin B17, a bactericidal peptide (antibiotic) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:11292337","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcin transport","termid":"GO:0042884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"microcin B17 transport","termid":"GO:0042885"}


id: MONDO:0013653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary late onset Parkinson disease in which the cause of the disease is a mutation in the EIF4G1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 18, autosomal dominant, susceptibility to","secondary_identifiers":["UMLS:C3280271","MEDGEN:481901","OMIM:614251"],"synonyms":[{"name":"EIF4G1 hereditary late onset Parkinson disease","type":"exact"},{"name":"PARK18","type":"related"},{"name":"Parkinson disease 18","type":"exact"},{"name":"Parkinson disease 18, autosomal dominant, susceptibility to","type":"exact"},{"name":"hereditary late onset Parkinson disease caused by mutation in EIF4G1","type":"exact"},{"name":"susceptibility to autosomal dominant Parkinson disease 18","type":"related"}],"termid":"MONDO:0013653","xrefs":{"Monarch":{"xref_id":"0013653"}}}


id: PBO:0080456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VSTM2A overlapping transcript 1","termid":"PBO:0080456"}


id: GO:0097115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process involved in assembly of the presynaptic membrane in which neurexins are localized to distinct domains in the cell membrane. Neurexins are synaptic cell surface proteins which act as cell recognition molecules at nerve terminals.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:12796785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"presynaptic membrane assembly","termid":"GO:0097105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"neurexin clustering involved in presynaptic membrane assembly","synonyms":[{"name":"Nrxn clustering","type":"broad"},{"name":"neurexin clustering","type":"broad"},{"name":"presynaptic neurexin clustering","type":"exact"}],"termid":"GO:0097115"}


id: PBO:0027425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_ionizing_radiation","termid":"PBO:0027425"}


id: GO:0051519
data:
  {"annotated_genes":["SJAG_02392","SJAG_00514","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91813,96527,97796],"is_not":false,"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that initiates the inactive process of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of bipolar cell growth","termid":"GO:0051518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051519","terms_by_termid":{"GO:0051519":null}}


id: PBO:0027548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_non-fermentable_carbon_source","termid":"PBO:0027548"}


id: PBO:0057326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520a","termid":"PBO:0057326"}


id: PBO:0049679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta","termid":"PBO:0049679"}


id: PBO:0004094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic RNA-binding protein 1","termid":"PBO:0004094"}


id: PBO:0083216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps TRP4; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083216"}


id: PBO:0075747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72 pseudogene 2","termid":"PBO:0075747"}


id: GO:0007474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the area of a imaginal disc-derived wing that will form a wing vein is specified.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing vein specification","synonyms":[{"name":"wing vein specification","type":"exact"}],"termid":"GO:0007474"}


id: PBO:0063480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase like, testis expressed","termid":"PBO:0063480"}


id: PBO:0046092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 3","termid":"PBO:0046092"}


id: PBO:0065981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAET1E antisense RNA 1","termid":"PBO:0065981"}


id: GO:0019760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae. They are metabolized to a variety of toxic products which are most likely the cause of hepatocytic necrosis in animals and humans.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glucosinolate metabolic process","synonyms":[{"name":"glucosinolate metabolism","type":"exact"}],"termid":"GO:0019760"}


id: GO:1900992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving (-)-secologanin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00328"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secologanin metabolic process (obsolete GO:1900992)","synonyms":[{"name":"(-)-secologanin metabolism","type":"exact"}],"termid":"GO:1900992"}


id: GO:0050384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(beta-D-ribofuranosyl)uric acid + phosphate = alpha-D-ribose 1-phosphate + H+ + urate.","definition_xrefs":["EC:2.4.2.16","RHEA:13909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"urate-ribonucleotide phosphorylase activity","secondary_identifiers":["KEGG_REACTION:R02646","MetaCyc:URATE-RIBONUCLEOTIDE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"UAR phosphorylase activity","type":"related"},{"name":"urate-ribonucleotide:phosphate D-ribosyltransferase activity","type":"related"},{"name":"urate-ribonucleotide:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0050384"}


id: PBO:0042563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 5","termid":"PBO:0042563"}


id: MONDO:1012470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pentalogy of Fallot, non-human animal","termid":"MONDO:1011650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentalogy of Fallot, horse","secondary_identifiers":["OMIA:001857-9796"],"termid":"MONDO:1012470","xrefs":{"Monarch":{"xref_id":"1012470"}}}


id: PATO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's exhibiting a layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stratification","termid":"PATO:0002067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratified","termid":"PATO:0002068"}


id: FYPO:0004851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is abnormal. An RNA metabolic process is a series of chemical reactions and pathways involving any type of RNA.","definition_xrefs":["GO:0016070","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolism phenotype","termid":"FYPO:0000294"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA metabolic process","synonyms":[{"name":"abnormal RNA metabolism","type":"exact"}],"termid":"FYPO:0004851"}


id: MONDO:1011031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Succinic semialdehyde dehydrogenase deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinic semialdehyde dehydrogenase deficiency, non-human animal","termid":"MONDO:1010252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinic semialdehyde dehydrogenase deficiency, dog","secondary_identifiers":["OMIA:002250-9615"],"termid":"MONDO:1011031","xrefs":{"Monarch":{"xref_id":"1011031"}}}


id: GO:0034015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ribulose 5-phosphate = L-xylulose 5-phosphate.","definition_xrefs":["RHEA:18497","EC:5.1.3.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-ribulose-5-phosphate 3-epimerase activity","secondary_identifiers":["MetaCyc:LXULRU5P-RXN"],"synonyms":[{"name":"L-xylulose 5-phosphate 3-epimerase activity","type":"related"},{"name":"SgaU","type":"related"},{"name":"UlaE","type":"related"}],"termid":"GO:0034015"}


id: FYPO:0001181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of maltose alpha-glucosidase (also known as maltase) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha-glucosidase activity","termid":"FYPO:0001182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal maltase activity","synonyms":[{"name":"normal maltose alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001181"}


id: MONDO:0033364
data:
  {"annotated_genes":["SJAG_02913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87348],"is_not":false,"summary":null,"term":"MONDO:0033364"}]},"cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by onset in the first weeks or months of life of refractory seizures, profoundly impaired intellectual development, absent speech, spastic quadriplegia, and dyskinetic movements that has material basis in homozygous or compound heterozygous mutation in the PIGP gene on chromosome 21q22.","definition_xrefs":["DOID:0080283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"},{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0002320","MONDO:0002525","MONDO:0700092","MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 55","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16241","UMLS:C4539843","MEDGEN:1622363","OMIM:617599"],"synonyms":[{"name":"DEE55","type":"exact"},{"name":"EIEE55","type":"exact"},{"name":"developmental and epileptic encephalopathy 55","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 55","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 14","type":"related"},{"name":"infantile epileptic encephalopathy 55","type":"related"}],"termid":"MONDO:0033364","terms_by_termid":{"MONDO:0033364":null},"xrefs":{"Monarch":{"xref_id":"0033364"}}}


id: SO:0001667
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sub element of the DCE core promoter element with consensus sequence AGC.","definition_xrefs":["SO:ke","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"DCE","termid":"SO:0001664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCE_SIII","synonyms":[{"name":"DCE SIII","type":"exact"}],"termid":"SO:0001667"}


id: PBO:0082081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribose-1-phosphate isomerase; catalyzes the isomerization of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate in the methionine salvage pathway","termid":"PBO:0082081"}


id: PATO:0000912
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rate which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased rate","synonyms":[{"name":"fast rate","type":"exact"},{"name":"high rate","type":"exact"}],"termid":"PATO:0000912"}


id: GO:0043513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with an inhibin beta-B subunit.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibin complex","termid":"GO:0043511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"inhibin B complex","termid":"GO:0043513"}


id: GO:0032428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-beta-D-galactosaminides.","definition_xrefs":["EC:3.2.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-N-acetylhexosaminidase activity","termid":"GO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"beta-N-acetylgalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.53-RXN"],"termid":"GO:0032428"}


id: MONDO:0004637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the aryepiglottic fold.","direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"hypopharynx cancer","termid":"MONDO:0005806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"aryepiglottic fold cancer","secondary_identifiers":["MEDGEN:509278","UMLS:C0153401","ICD9:148.2","DOID:8663","ICD10CM:C13.1","SCTID:187708004"],"synonyms":[{"name":"aryepiglottic fold cancer","type":"exact"},{"name":"cancer of aryepiglottic fold","type":"exact"},{"name":"malignant aryepiglottic fold neoplasm","type":"exact"},{"name":"malignant neoplasm of aryepiglottic fold","type":"exact"},{"name":"malignant neoplasm of hypopharyngeal aspect of aryepiglottic fold","type":"exact"},{"name":"malignant tumor aryepiglottic fold - hypopharyngeal aspect","type":"exact"},{"name":"malignant tumour aryepiglottic fold - hypopharyngeal aspect","type":"exact"}],"termid":"MONDO:0004637","xrefs":{"Monarch":{"xref_id":"0004637"}}}


id: MONDO:0003674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electrocardiographic finding of an injury in leads corresponding to the anatomic region of the subendocardial layer of the wall of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"subendocardial myocardial infarction","secondary_identifiers":["MEDGEN:75500","UMLS:C0262568","DOID:5849"],"synonyms":[{"name":"myocardial infarction (disease) of subendocardium layer","type":"exact"},{"name":"subendocardium layer myocardial infarction (disease)","type":"exact"}],"termid":"MONDO:0003674","xrefs":{"Monarch":{"xref_id":"0003674"}}}


id: GO:0004588
data:
  {"annotated_genes":["SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75211],"is_not":false,"summary":null,"term":"GO:0004588"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["EC:2.4.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"orotate phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:10380","MetaCyc:OROPRIBTRANS-RXN","Reactome:R-HSA-73567"],"synonyms":[{"name":"OPRT activity","type":"related"},{"name":"OPRTase activity","type":"related"},{"name":"orotate phosphoribosyl pyrophosphate transferase activity","type":"related"},{"name":"orotic acid phosphoribosyltransferase activity","type":"related"},{"name":"orotidine 5'-monophosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine monophosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine phosphoribosyltransferase activity","type":"related"},{"name":"orotidine-5'-phosphate diphosphorylase activity","type":"related"},{"name":"orotidine-5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine-5'-phosphate:diphosphate phospho-alpha-D-ribosyl-transferase activity","type":"related"},{"name":"orotidylate phosphoribosyltransferase activity","type":"related"},{"name":"orotidylate pyrophosphorylase activity","type":"related"},{"name":"orotidylic acid phosphorylase activity","type":"related"},{"name":"orotidylic acid pyrophosphorylase activity","type":"related"},{"name":"orotidylic phosphorylase activity","type":"related"},{"name":"orotidylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004588","terms_by_termid":{"GO:0004588":null}}


id: GO:1905489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory neuron axon guidance.","definition_xrefs":["PMID:16516839","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory neuron axon guidance","termid":"GO:1905489"}


id: PBO:0058354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4727","termid":"PBO:0058354"}


id: PATO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An osmolality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolality","termid":"PATO:0002027"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased osmolality","synonyms":[{"name":"low osmolality","type":"exact"}],"termid":"PATO:0002028"}


id: PBO:0058876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10392","termid":"PBO:0058876"}


id: PBO:0089325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp3","termid":"PBO:0089325"}


id: MONDO:0017975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital conditions of atypical sexual development associated with abnormal sex chromosome constitutions including monosomy; trisomy; and mosaicism.","definition_xrefs":["MESH:D058533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sexual differentiation","termid":"MONDO:0002145"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sex chromosome disorder of sex development","secondary_identifiers":["MEDGEN:423530","Orphanet:325546","UMLS:C2936421"],"synonyms":[{"name":"Sex chromosome DSD","type":"exact"}],"termid":"MONDO:0017975","xrefs":{"Monarch":{"xref_id":"0017975"}}}


id: PBO:0076586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 9","termid":"PBO:0076586"}


id: GO:1900319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from dimethylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from dimethylamine","termid":"GO:1900318"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from dimethylamine","synonyms":[{"name":"down regulation of methane biosynthetic process from dimethylamine","type":"exact"},{"name":"down-regulation of methane biosynthetic process from dimethylamine","type":"exact"},{"name":"downregulation of methane biosynthetic process from dimethylamine","type":"exact"},{"name":"inhibition of methane biosynthetic process from dimethylamine","type":"narrow"}],"termid":"GO:1900319"}


id: PBO:0041725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II alpha","termid":"PBO:0041725"}


id: GO:0106364
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61418],"is_not":false,"summary":null,"term":"GO:0106364"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-3-all-trans-polyprenylbenzoate + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = 3,4-dihydroxy-5-all-trans-polyprenylbenzoate + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:81195","PMID:38425362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["EC:1.14.15.45"],"synonyms":[{"name":"4-hydroxy-3-all-trans-hexaprenylbenzoate oxygenase activity","type":"narrow"}],"termid":"GO:0106364","terms_by_termid":{"GO:0106364":null}}


