# terms

id: GO:0072027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the connecting tubule over time, from its formation to the mature structure. The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connecting tubule development","synonyms":[{"name":"connecting duct development","type":"exact"}],"termid":"GO:0072027"}


id: MONDO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease that results in infection located in eyes or located in upper respiratory tract of domestic rabbits, has material basis in Myxoma virus, which is transmitted by mosquitos, transmitted by biting flies or transmitted by direct contact. The infection has symptom conjunctivitis with a milky discharge from the inflamed eye and has symptom breathing difficulties.","definition_xrefs":["EFO:0007327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious myxomatosis","secondary_identifiers":["MESH:D009234"],"termid":"MONDO:0005811","xrefs":{"Monarch":{"xref_id":"0005811"}}}


id: PBO:0071382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 5","termid":"PBO:0071382"}


id: MONDO:0024247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing eccrine appendage sweat gland neoplasm. Representative examples include hidrocystoma, syringoma, and syringofibroadenoma.","definition_xrefs":["NCIT:C6797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine sweat gland neoplasm","termid":"MONDO:0002090"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign eccrine neoplasm","secondary_identifiers":["SCTID:254715009","UMLS:C1332493","MEDGEN:231934"],"synonyms":[{"name":"benign eccrine neoplasm","type":"exact"},{"name":"benign eccrine neoplasm of skin","type":"exact"},{"name":"benign eccrine neoplasm of the skin","type":"exact"},{"name":"benign eccrine skin neoplasm","type":"exact"},{"name":"benign eccrine skin tumor","type":"exact"},{"name":"benign eccrine skin tumour","type":"exact"},{"name":"benign eccrine sweat gland neoplasm","type":"exact"},{"name":"benign eccrine tumor","type":"exact"},{"name":"benign eccrine tumor of skin","type":"exact"},{"name":"benign eccrine tumor of the skin","type":"exact"},{"name":"benign eccrine tumour","type":"exact"},{"name":"benign eccrine tumour of skin","type":"exact"},{"name":"benign eccrine tumour of the skin","type":"exact"},{"name":"benign skin tumor with eccrine differentiation","type":"exact"},{"name":"benign skin tumour with eccrine differentiation","type":"exact"},{"name":"eccrine sweat gland neoplasm, benign","type":"exact"}],"termid":"MONDO:0024247","xrefs":{"Monarch":{"xref_id":"0024247"}}}


id: GO:0018454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.1.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acetoacetyl-CoA reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0202","RHEA:22256"],"synonyms":[{"name":"(R)-3-hydroxyacyl-CoA dehydrogenase activity","type":"related"},{"name":"(R)-3-hydroxyacyl-CoA:NADP+ oxidoreductase activity","type":"related"},{"name":"D(-)-beta-hydroxybutyryl CoA-NADP oxidoreductase activity","type":"related"},{"name":"D-3-hydroxyacyl-CoA reductase activity","type":"related"},{"name":"NADP-linked acetoacetyl CoA reductase activity","type":"related"},{"name":"NADPH:acetoacetyl-CoA reductase activity","type":"related"},{"name":"acetoacetyl coenzyme A reductase activity","type":"related"},{"name":"beta-ketoacyl-CoA reductase","type":"broad"},{"name":"hydroxyacyl coenzyme-A dehydrogenase activity","type":"related"},{"name":"short chain beta-ketoacetyl(acetoacetyl)-CoA reductase activity","type":"related"}],"termid":"GO:0018454"}


id: GO:0021804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the loss of attachments of a cell in the ventricular zone.","definition_xrefs":["PMID:12626695","GOC:dph","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"part_of","term_name":"somal translocation","termid":"GO:0021802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell adhesion in ventricular zone","synonyms":[{"name":"down regulation of cell adhesion in ventricular zone","type":"exact"},{"name":"down-regulation of cell adhesion in ventricular zone","type":"exact"},{"name":"downregulation of cell adhesion in ventricular zone","type":"exact"},{"name":"inhibition of cell adhesion in ventricular zone","type":"narrow"}],"termid":"GO:0021804"}


id: GO:0016933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when glycine is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"extracellularly glycine-gated ion channel activity","synonyms":[{"name":"extracellular-glycine-gated ion channel activity","type":"exact"},{"name":"glycine receptor","type":"broad"}],"termid":"GO:0016933"}


id: MONDO:0013230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hot water reflex epilepsy","termid":"MONDO:0013229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, hot water, 2","secondary_identifiers":["DOID:0081107","OMIM:613340","GARD:18287","MEDGEN:461886","UMLS:C3150536"],"synonyms":[{"name":"HWE2","type":"related"},{"name":"epilepsy, hot water, 2","type":"exact"}],"termid":"MONDO:0013230","xrefs":{"Monarch":{"xref_id":"0013230"}}}


id: GO:1903286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion import.","definition_xrefs":["PMID:10636900","GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"regulates","term_name":"potassium ion import across plasma membrane","termid":"GO:1990573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of potassium ion import","synonyms":[{"name":"regulation of potassium import","type":"exact"},{"name":"regulation of potassium ion uptake","type":"exact"}],"termid":"GO:1903286"}


id: GO:0015425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + nonpolar amino acid(out) = ADP + phosphate + nonpolar amino acid(in).","definition_xrefs":["EC:7.4.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type amino acid transporter activity","termid":"GO:0015424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled nonpolar-amino acid transporter activity","secondary_identifiers":["TC:3.A.1.4.1","MetaCyc:3.6.3.22-RXN"],"synonyms":[{"name":"ATP-dependent nonpolar-amino acid transporter activity","type":"exact"},{"name":"leucine/isoleucine/valine porter activity","type":"related"},{"name":"nonpolar amino acid-transporting ATPase activity","type":"exact"},{"name":"nonpolar-amino acid ABC transporter","type":"exact"},{"name":"nonpolar-amino acid-transporting ATPase activity","type":"exact"},{"name":"nonpolar-amino-acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0015425"}


id: GO:0022624
data:
  {"annotated_genes":["SJAG_01203","SJAG_04211","SJAG_00766","SJAG_01544","SJAG_03638","SJAG_03321","SJAG_00738","SJAG_04484","SJAG_02992","SJAG_04477","SJAG_04088","SJAG_04144","SJAG_00762","SJAG_01489","SJAG_02900","SJAG_00712","SJAG_01652","SJAG_04572","SJAG_01131","SJAG_03408"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78784,81064,75594,79886,79998,81447,80327,81730,75018],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[63439,76111,80036,73146,117153,62171,76138,70671,81374,78351,74667,100900],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A protein complex, that caps one or both ends of the proteasome core complex and regulates entry into, or exit from, the proteasome core complex.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome complex","termid":"GO:0000502"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome accessory complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0022624","terms_by_termid":{"GO:0008540":null,"GO:0008541":null}}


id: PBO:0070196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 120 pseudogene","termid":"PBO:0070196"}


id: MONDO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cavernous hemangioma arising from the orbit.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"cavernous hemangioma of orbit","secondary_identifiers":["UMLS:C0346352","NCIT:C4546","ICD9:228.09","SCTID:254998002","DOID:14463","MEDGEN:138059"],"synonyms":[{"name":"cavernous angioma of orbit","type":"exact"},{"name":"cavernous angioma of the orbit","type":"exact"},{"name":"cavernous hemangioma of the orbit","type":"exact"},{"name":"orbit cavernous angioma","type":"exact"},{"name":"orbit cavernous hemangioma","type":"exact"}],"termid":"MONDO:0001975","xrefs":{"Monarch":{"xref_id":"0001975"}}}


id: PBO:0076455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 2 pseudogene 1","termid":"PBO:0076455"}


id: GO:0097505
data:
  {"annotated_genes":["SJAG_00819"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79011],"is_not":false,"summary":null,"term":"GO:0097505"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found to be involved in post-replicative bypass of UV-damaged DNA and UV mutagenesis. In S. cerevisiae, the complex contains the ubiquitin conjugating enzyme Rad6 and Rad18, a protein containing a RING finger motif and a nucleotide binding motif. The yeast Rad6-Rad18 heterodimer has ubiquitin conjugating activity, binds single-stranded DNA, and possesses single-stranded DNA-dependent ATPase activity.","definition_xrefs":["PMID:9287349","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Rad6-Rad18 complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0097505","terms_by_termid":{"GO:0097505":null}}


id: GO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IIa hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIa hypersensitivity","termid":"GO:0001796"},{"relation_name":"is_a","term_name":"negative regulation of type II hypersensitivity","termid":"GO:0002893"},{"relation_name":"negatively_regulates","term_name":"type IIa hypersensitivity","termid":"GO:0001794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IIa hypersensitivity","synonyms":[{"name":"down regulation of type IIa hypersensitivity","type":"exact"},{"name":"down-regulation of type IIa hypersensitivity","type":"exact"},{"name":"downregulation of type IIa hypersensitivity","type":"exact"},{"name":"inhibition of type IIa hypersensitivity","type":"narrow"}],"termid":"GO:0001797"}


id: PBO:0026980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_membrane","termid":"PBO:0026980"}


id: MONDO:0018339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prion protein (PrP) systemic amyloidosis, previously known as chronic diarrhea with hereditary sensory and autonomic neuropathy is an extremely rare autosomal dominant disorder reported in three British families, a Japanese and an Italian family (about 16 cases in total). Onset is usually in the fourth decade of life and the course lasts about 20 years. Reported clinical manifestations include diarrhea, nausea, autonomic failure (areflexia, weakness), neurogenic bladder and urinary infections. The disorder is caused by truncation mutations of the prion protein gene PRNP (20p13) leading to deposition of prion protein amyloid.","definition_xrefs":["Orphanet:397606"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PrP systemic amyloidosis","secondary_identifiers":["UMLS:C4518776","MEDGEN:1377371","SCTID:733422008","GARD:21632"],"synonyms":[{"name":"chronic diarrhea with HSAN","type":"exact"},{"name":"chronic diarrhea with hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"chronic diarrhoea with HSAN","type":"exact"},{"name":"chronic diarrhoea with hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"prion protein systemic amyloidosis","type":"exact"}],"termid":"MONDO:0018339","xrefs":{"Monarch":{"xref_id":"0018339"}}}


id: PBO:0079016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TruB pseudouridine synthase family member 1","termid":"PBO:0079016"}


id: PBO:0081017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 48","termid":"PBO:0081017"}


id: PBO:0058637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6769a","termid":"PBO:0058637"}


id: PBO:0071459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32","termid":"PBO:0071459"}


id: PBO:0112489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane protein, palmitoylated, Uvi15","termid":"PBO:0112489"}


id: MONDO:1010117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The sudden unexpected death of a person age 1 to 18 years that remains unexplained after a thorough case investigation, including performance of a complete autopsy with ancillary testing, and review of the clinical history and circumstances of death.","definition_xrefs":["PMID:31502215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sudden unexpected death in pediatrics","termid":"MONDO:1010120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden unexplained death in childhood","secondary_identifiers":["UMLS:C3827273","MEDGEN:820021"],"termid":"MONDO:1010117","xrefs":{"Monarch":{"xref_id":"1010117"}}}


id: PR:Q42598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A threonine synthase-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.06c","secondary_identifiers":["UniProtKB:Q42598"],"synonyms":[{"name":"Spom972h-THNSL2","type":"exact"},{"name":"TS (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q42598"}


id: PBO:0089729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1","termid":"PBO:0089729"}


id: MONDO:0968980
data:
  {"annotated_genes":["SJAG_05313","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89118,89119],"is_not":false,"summary":null,"term":"MONDO:0968980"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1856162","OMIM:620792","UMLS:C5935610"],"termid":"MONDO:0968980","terms_by_termid":{"MONDO:0968980":null},"xrefs":{"Monarch":{"xref_id":"0968980"}}}


id: GO:1901964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in outflow tract morphogenesis.","definition_xrefs":["GOC:dph","GOC:mtg_heart","GOC:TermGenie","PMID:21419760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in outflow tract morphogenesis","termid":"GO:1901963"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000138"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in outflow tract morphogenesis","termid":"GO:0061325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in outflow tract morphogenesis","synonyms":[{"name":"activation of cell proliferation involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of cell proliferation involved in outflow tract morphogenesis","type":"exact"},{"name":"up-regulation of cell proliferation involved in outflow tract morphogenesis","type":"exact"},{"name":"upregulation of cell proliferation involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:1901964"}


id: PBO:0059366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B pseudogene 1","termid":"PBO:0059366"}


id: PBO:0074278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIRP. pseudogene 2","termid":"PBO:0074278"}


id: PBO:0046705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 4","termid":"PBO:0046705"}


id: PBO:0059582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTA3 pseudogene 1","termid":"PBO:0059582"}


id: FYPO:0007031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips  does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during mitotic interphase","termid":"FYPO:0003329"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006502"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to cell cortex of cell tip during mitotic interphase","synonyms":[{"name":"abolished protein localisation to cell cortex of cell tip during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cell cortex of cell end during mitotic interphase during vegetative growth","type":"related"},{"name":"abolished protein localization to cell cortex of cell tip during interphase of mitotic cell cycle","type":"exact"},{"name":"abolished protein localization to cell tip cortex during mitotic interphase","type":"exact"},{"name":"protein localization to cell cortex of cell tip abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007031"}


id: PBO:0119635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein (MAL blood group)","termid":"PBO:0119635"}


id: PBO:0088562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase DHRS3 family, implicated in lipid (isoprenoid) metabolism","termid":"PBO:0088562"}


id: MONDO:0017361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious embryofetopathy that may present in an infant as a result of maternal infection and subsequent fetal infection with rubella virus. CRS can lead to deafness, cataract, and variety of other permanent manifestations including cardiac and neurological defects.","definition_xrefs":["Orphanet:290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubella","termid":"MONDO:0004656"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital rubella syndrome","secondary_identifiers":["NANDO:2200890","MedDRA:10010618","NORD:1681","NCIT:C34992","UMLS:C0035921","SCTID:1857005","MESH:D012410","ICD9:771.0","GARD:4744","MEDGEN:19841","ICD10CM:P35.0","EFO:0007218","icd11.foundation:1059053724"],"synonyms":[{"name":"CRS","type":"exact"},{"name":"Rubella, Congenital","type":"exact"},{"name":"congenital rubella","type":"exact"},{"name":"congenital rubella syndrome","type":"exact"},{"name":"fetal rubella syndrome","type":"exact"},{"name":"foetal rubella syndrome","type":"exact"},{"name":"mother-to-child transmission of rubella syndrome","type":"exact"},{"name":"rubella congenital","type":"exact"}],"termid":"MONDO:0017361","xrefs":{"Monarch":{"xref_id":"0017361"}}}


id: GO:0000943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of the retrotransposon RNA genome, reverse transcriptase, integrase, and associated molecules required for reproduction and integration of the retrotransposon into the host genome; the main structural molecule of the nucleocapsid is often a gag protein homolog.","definition_xrefs":["GOC:clt","PMID:10861903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"retrotransposon nucleocapsid","secondary_identifiers":["Wikipedia:Virus-like_particle"],"synonyms":[{"name":"VLP","type":"exact"},{"name":"Virus-like particle","type":"exact"}],"termid":"GO:0000943"}


id: MONDO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the esophagus. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagus sarcoma","termid":"MONDO:0001204"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophagus leiomyosarcoma","secondary_identifiers":["MEDGEN:272589","NCIT:C5334","DOID:5276","UMLS:C1333454"],"synonyms":[{"name":"esophageal leiomyosarcoma","type":"exact"},{"name":"esophagus leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of esophagus","type":"exact"},{"name":"leiomyosarcoma of oesophagus","type":"exact"},{"name":"leiomyosarcoma of the esophagus","type":"exact"},{"name":"leiomyosarcoma of the oesophagus","type":"exact"}],"termid":"MONDO:0003365","xrefs":{"Monarch":{"xref_id":"0003365"}}}


id: PBO:0059077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin oligodendrocyte glycoprotein","termid":"PBO:0059077"}


id: FYPO:0004731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus-end of a cytoplasmic microtubule is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"normal protein localization to interphase microtubule","termid":"FYPO:0005842"},{"relation_name":"is_a","term_name":"normal protein localization to microtubule plus-end","termid":"FYPO:0007452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to interphase microtubule plus-end","secondary_identifiers":["FYPO:0005812"],"synonyms":[{"name":"normal protein localisation to cytoplasmic microtubule plus-end during mitotic interphase","type":"exact"},{"name":"normal protein localisation to interphase microtubule plus-end","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule plus end during mitotic interphase","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule plus-end during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule plus-end during interphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule plus-end during mitotic interphase","type":"exact"},{"name":"normal protein localization to interphase cytoplasmic microtubule plus-end","type":"exact"},{"name":"normal protein localization to interphase microtubule plus end","type":"exact"},{"name":"normal protein localization to interphase microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"normal protein localization to interphase microtubule plus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0004731"}


id: PBO:0067600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 763, pseudogene","termid":"PBO:0067600"}


id: MONDO:0009994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing malignant mesenchymal neoplasm. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma resembling an alveolar growth pattern. The tumor usually presents in the extremities.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"alveolar rhabdomyosarcoma","secondary_identifiers":["icd11.foundation:1742058067","OMIM:268220","ICD9:171.9","NCIT:C3749","GARD:4701","HP:0006779","MedDRA:10065867","UMLS:C0206655","DOID:4051","MEDGEN:61651","MESH:D018232","EFO:0000248","ONCOTREE:ARMS","Orphanet:99756","ICDO:8920/3","SCTID:404053004"],"synonyms":[{"name":"ARMS","type":"exact"},{"name":"RMS2","type":"related"},{"name":"alveolar childhood rhabdomyosarcoma","type":"exact"},{"name":"alveolar rhabdomyosarcoma","type":"exact"},{"name":"alveolar rhabdomyosarcoma (disease)","type":"exact"},{"name":"alveolar rhabdomyosarcoma (morphologic abnormality)","type":"exact"},{"name":"arms","type":"exact"},{"name":"monomorphous round cell rhabdomyosarcoma","type":"exact"},{"name":"paediatric alveolar rhabdomyosarcoma","type":"exact"},{"name":"pediatric alveolar rhabdomyosarcoma","type":"exact"},{"name":"rhabdomyosarcoma 2","type":"related"},{"name":"rhabdomyosarcoma 2, alveolar, somatic mutation","type":"exact"},{"name":"rhabdomyosarcoma alveolar","type":"related"},{"name":"rhabdomyosarcoma type 2","type":"exact"},{"name":"rhabdomyosarcoma, alveolar","type":"related"},{"name":"rhabdomyosarcoma, alveolar, somatic mutation","type":"exact"}],"termid":"MONDO:0009994","xrefs":{"Monarch":{"xref_id":"0009994"}}}


id: PBO:0052373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 18B pseudogene 1","termid":"PBO:0052373"}


id: PR:Q09763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gef1 gene.","definition_xrefs":["UniProtKB:Q09763","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor gef1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.09","synonyms":[{"name":"Spom972h-gef1","type":"exact"}],"termid":"PR:Q09763"}


id: GO:0051497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament bundle assembly","termid":"GO:0032232"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"negatively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"negative regulation of stress fiber assembly","synonyms":[{"name":"down regulation of stress fiber formation","type":"related"},{"name":"down-regulation of stress fiber formation","type":"exact"},{"name":"downregulation of stress fiber formation","type":"related"},{"name":"inhibition of stress fiber formation","type":"narrow"},{"name":"negative regulation of stress fibre biosynthesis","type":"related"},{"name":"negative regulation of stress fibre formation","type":"related"}],"termid":"GO:0051497"}


id: GO:0170033
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chemical reactions and pathways involving an L-amino acid.","definition_xrefs":["GOC:edw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic 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id: PBO:0054735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2144","termid":"PBO:0054735"}


id: GO:0048093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in males.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of male pigmentation","termid":"GO:0048088"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"male pigmentation","termid":"GO:0048094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male pigmentation","synonyms":[{"name":"activation of male pigmentation","type":"narrow"},{"name":"stimulation of male pigmentation","type":"narrow"},{"name":"up regulation of male pigmentation","type":"exact"},{"name":"up-regulation of male pigmentation","type":"exact"},{"name":"upregulation of male pigmentation","type":"exact"}],"termid":"GO:0048093"}


id: MONDO:0012241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive external ophthalmoplegia with mitochondrial DNA deletions in which the cause of the disease is a mutation in the TWNK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant progressive external ophthalmoplegia","termid":"MONDO:0008003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0000426","MONDO:0004069","MONDO:0002320"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 3","secondary_identifiers":["DOID:0111520","MEDGEN:373087","GARD:16499","MESH:C563747","OMIM:609286","UMLS:C1836439"],"synonyms":[{"name":"PEOA3","type":"related"},{"name":"TWNK progressive external ophthalmoplegia with mitochondrial DNA deletions","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions caused by mutation in TWNK","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 3","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant type 3","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal dominant 3","type":"related"}],"termid":"MONDO:0012241","xrefs":{"Monarch":{"xref_id":"0012241"}}}


id: GO:0003904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclobutadipyrimidine (in DNA) = 2 pyrimidine residues (in DNA). This reaction represents the reactivation of irradiated DNA by light.","definition_xrefs":["EC:4.1.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA photolyase activity","termid":"GO:0003913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"deoxyribodipyrimidine photo-lyase activity","secondary_identifiers":["RHEA:10672"],"synonyms":[{"name":"CPD photolyase activity","type":"exact"},{"name":"DNA cyclobutane dipyrimidine photolyase activity","type":"related"},{"name":"DNA-photoreactivating enzyme","type":"related"},{"name":"PRE","type":"related"},{"name":"PhrB photolyase activity","type":"related"},{"name":"deoxyribocyclobutadipyrimidine pyrimidine-lyase activity","type":"related"},{"name":"deoxyribodipyrimidine photolyase activity","type":"exact"},{"name":"deoxyribonucleate pyrimidine dimer lyase (photosensitive)","type":"related"},{"name":"deoxyribonucleic cyclobutane dipyrimidine photolyase activity","type":"related"},{"name":"deoxyribonucleic photolyase activity","type":"related"},{"name":"dipyrimidine photolyase (photosensitive)","type":"related"},{"name":"photolyase activity","type":"related"},{"name":"photoreactivating enzyme activity","type":"related"},{"name":"phr A photolyase activity","type":"related"}],"termid":"GO:0003904"}


id: MONDO:1010627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chediak-Higashi syndrome that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chediak-Higashi syndrome, non-human animal","termid":"MONDO:1010070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome, American mink","secondary_identifiers":["OMIA:000185-452646"],"termid":"MONDO:1010627","xrefs":{"Monarch":{"xref_id":"1010627"}}}


id: GO:0004755
data:
  {"annotated_genes":["SJAG_01061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111683],"is_not":false,"summary":null,"term":"GO:0004755"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-saccharopine + H2O + NADP+ = L-allysine + L-glutamate + H+ + NADPH.","definition_xrefs":["EC:1.5.1.10","RHEA:10020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saccharopine dehydrogenase activity","termid":"GO:0004753"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"saccharopine dehydrogenase (NADP+, L-glutamate-forming) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3O-127","KEGG_REACTION:R02315"],"synonyms":[{"name":"6-N-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-glutamate-forming)","type":"related"},{"name":"N6-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-glutamate-forming)","type":"related"},{"name":"aminoadipate semialdehyde-glutamate reductase activity","type":"related"},{"name":"aminoadipic semialdehyde-glutamate reductase activity","type":"related"},{"name":"aminoadipic semialdehyde-glutamic reductase activity","type":"related"},{"name":"epsilon-N-(L-glutaryl-2)-L-lysine:NAD+(P) oxidoreductase (L-2-aminoadipate-semialdehyde forming)","type":"related"},{"name":"saccharopine (nicotinamide adenine dinucleotide phosphate, glutamate-forming) dehydrogenase activity","type":"related"},{"name":"saccharopine reductase activity","type":"related"}],"termid":"GO:0004755","terms_by_termid":{"GO:0004755":null}}


id: PBO:0062060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily X member 1 pseudogene","termid":"PBO:0062060"}


id: PBO:0090382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRC complex (ER membrane insertion) subunit Get4","termid":"PBO:0090382"}


id: GO:0071657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of granulocyte colony-stimulating factor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte colony-stimulating factor production","termid":"GO:0071655"},{"relation_name":"is_a","term_name":"positive regulation of macrophage colony-stimulating factor production","termid":"GO:1901258"},{"relation_name":"positively_regulates","term_name":"granulocyte colony-stimulating factor production","termid":"GO:0071611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulocyte colony-stimulating factor production","synonyms":[{"name":"positive regulation of CSF3 production","type":"exact"},{"name":"positive regulation of G-CSF production","type":"exact"},{"name":"positive regulation of colony stimulating factor 3 (granulocyte) production","type":"exact"},{"name":"positive regulation of filgrastim production","type":"exact"},{"name":"positive regulation of granulocyte colony stimulating factor production","type":"exact"},{"name":"positive regulation of lenograstim production","type":"exact"},{"name":"positive regulation of pluripoietin production","type":"exact"}],"termid":"GO:0071657"}


id: GO:1990374
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A inward rectifier potassium channel complex. Homo- or heterotetramer composed of subunits of the eukaryotic Kir2 protein family. Plays a key role in maintaining the correct resting potential in eukaryotic cells.","definition_xrefs":["GOC:bhm","PMID:16834334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inward rectifier potassium channel complex","termid":"GO:1902937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Kir2 inward rectifier potassium channel complex","synonyms":[{"name":"Kir2.1 complex","type":"narrow"}],"termid":"GO:1990374"}


id: PBO:0083836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; proteasome-interacting protein involved in the assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); ortholog of human oncoprotein gankyrin, also known as p28, which interacts with the Rb tumor suppressor and CDK4/6","termid":"PBO:0083836"}


id: PBO:0030757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_amphotericin_B","termid":"PBO:0030757"}


id: FYPO:0009112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which flocculation does not occur in conditions where wild-type cells floculate. Flocculation is the non-sexual aggregation of cells.","definition_xrefs":["PMID:35924983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished flocculation during vegetative growth","termid":"FYPO:0009112"}


id: MONDO:0015859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare non-malformative uterovaginal or vulvovaginal disease (obsolete MONDO:0015859)","secondary_identifiers":["Orphanet:180205"],"termid":"MONDO:0015859","xrefs":{"Monarch":{"xref_id":"0015859"}}}


id: PBO:0068318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 19A, RBR E3 ubiquitin protein ligase","termid":"PBO:0068318"}


id: GO:0006532
data:
  {"annotated_genes":["SJAG_03306"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79589],"is_not":false,"summary":null,"term":"GO:0006532"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aspartate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aspartate anabolism","type":"exact"},{"name":"aspartate biosynthesis","type":"exact"},{"name":"aspartate formation","type":"exact"},{"name":"aspartate synthesis","type":"exact"}],"termid":"GO:0006532","terms_by_termid":{"GO:0006532":null}}


id: PBO:0059462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 2","termid":"PBO:0059462"}


id: PBO:0050788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3B","termid":"PBO:0050788"}


id: PBO:0058746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6870","termid":"PBO:0058746"}


id: GO:1901120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tobramycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tobramycin catabolic process","synonyms":[{"name":"tobramycin breakdown","type":"exact"},{"name":"tobramycin catabolism","type":"exact"},{"name":"tobramycin degradation","type":"exact"}],"termid":"GO:1901120"}


id: PBO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_S-phase_DNA_damage_checkpoint","termid":"PBO:0031419"}


id: SO:0001384
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A portion of a CDS that is not the complete CDS.","direct_ancestors":[{"relation_name":"has_quality","term_name":"fragmentary","termid":"SO:0000731"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_fragment","synonyms":[{"name":"CDS fragment","type":"exact"},{"name":"incomplete CDS","type":"exact"}],"termid":"SO:0001384"}


id: GO:0101031
data:
  {"annotated_genes":["SJAG_00609","SJAG_03570","SJAG_04121","SJAG_02926","SJAG_02378","SJAG_03320","SJAG_01002","SJAG_00447"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78062,79943,75499,71706,74554,80032,81675,78680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005832"}]},"cv_name":"cellular_component","definition":"A protein complex required for the non-covalent folding or unfolding, maturation, stabilization or assembly or disassembly of macromolecular structures. Usually active during or immediately after completion of translation. Many chaperone complexes contain heat shock proteins.","definition_xrefs":["PMID:21855797","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00609":null,"SJAG_01002":null,"SJAG_02378":null,"SJAG_02926":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04121":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein folding chaperone complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"chaperone complex","type":"broad"}],"termid":"GO:0101031","terms_by_termid":{"GO:0005832":null}}


id: PBO:0041384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 24","termid":"PBO:0041384"}


id: MONDO:0015105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete African tick typhus (obsolete MONDO:0015105)","termid":"MONDO:0015105","xrefs":{"Monarch":{"xref_id":"0015105"}}}


id: PBO:0068700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 81, pseudogene","termid":"PBO:0068700"}


id: FYPO:0000342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular respiration is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased cellular respiration","synonyms":[{"name":"decreased cellular respiration during mitotic cell cycle","type":"related"},{"name":"decreased cellular respiration during vegetative growth","type":"exact"},{"name":"decreased respiration","type":"broad"},{"name":"decreased respiratory metabolism","type":"exact"},{"name":"reduced cellular respiration","type":"exact"},{"name":"respiratory metabolism: decreased","type":"related"}],"termid":"FYPO:0000342"}


id: FYPO:0008371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cell surface during cellular response to salt stress","termid":"FYPO:0008371"}


id: GO:0046647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell proliferation","termid":"GO:0046646"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell proliferation","synonyms":[{"name":"down regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"down-regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"downregulation of gamma-delta T cell proliferation","type":"exact"},{"name":"inhibition of gamma-delta T cell proliferation","type":"narrow"},{"name":"negative regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"negative regulation of gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046647"}


id: PBO:0027614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype_following_normal_mitosis","termid":"PBO:0027614"}


id: MONDO:0011043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelodysplasia, immunodeficiency, facial dysmorphism, short stature, and psychomotor delay","secondary_identifiers":["MEDGEN:318627","OMIM:601347","MESH:C563345","UMLS:C1832442"],"synonyms":[{"name":"myelodysplasia, immunodeficiency, facial dysmorphism, short stature, and psychomotor delay","type":"exact"}],"termid":"MONDO:0011043","xrefs":{"Monarch":{"xref_id":"0011043"}}}


id: GO:0002820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adaptive immune response","synonyms":[{"name":"down regulation of adaptive immune response","type":"exact"},{"name":"down-regulation of adaptive immune response","type":"exact"},{"name":"downregulation of adaptive immune response","type":"exact"},{"name":"inhibition of adaptive immune response","type":"narrow"}],"termid":"GO:0002820"}


id: PBO:0053760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1002","termid":"PBO:0053760"}


id: PBO:0053366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 278","termid":"PBO:0053366"}


id: FYPO:0000755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione gamma-glutamylcysteinyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutathione gamma-glutamylcysteinyltransferase activity","termid":"FYPO:0000754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased glutathione gamma-glutamylcysteinyltransferase activity","synonyms":[{"name":"reduced glutathione gamma-glutamylcysteinyltransferase activity","type":"exact"}],"termid":"FYPO:0000755"}


id: GO:0003161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cardiac conduction system over time, from its formation to the mature structure. The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac conduction system development","synonyms":[{"name":"cardiac impulse conducting system development","type":"exact"},{"name":"heart conduction system development","type":"exact"}],"termid":"GO:0003161"}


id: GO:0042542
data:
  {"annotated_genes":["SJAG_02515","SJAG_00141","SJAG_01216","SJAG_01199","SJAG_04953","SJAG_04823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110813,119373,120310,97148,101958,107013],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042542","terms_by_termid":{"GO:0061692":null}}


id: PBO:0068592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 43, pseudogene","termid":"PBO:0068592"}


id: GO:0047986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + S(2-) = CoA + thioacetate.","definition_xrefs":["RHEA:16625","EC:2.3.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrogen-sulfide S-acetyltransferase activity","secondary_identifiers":["MetaCyc:HYDROGEN-SULFIDE-S-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R01850"],"synonyms":[{"name":"acetyl-CoA:hydrogen-sulfide S-acetyltransferase activity","type":"related"},{"name":"hydrogen-sulfide acetyltransferase activity","type":"related"},{"name":"hydrogen-sulphide S-acetyltransferase activity","type":"exact"}],"termid":"GO:0047986"}


id: MONDO:0700250
data:
  {"annotated_genes":["SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89157],"is_not":false,"summary":null,"term":"MONDO:0700250"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex IV deficiency, nuclear type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5435656","MEDGEN:1750917","OMIM:220110","DOID:0070491","GARD:15158"],"termid":"MONDO:0700250","terms_by_termid":{"MONDO:0700250":null},"xrefs":{"Monarch":{"xref_id":"0700250"}}}


id: MONDO:0017138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Opitz G/BBB syndrome (OS) is a multiple congenital anomalies disorder characterized by malformations of the midline including hypertelorism, laryngo-tracheo-esophalgeal defects and hypospadias. There are two clinically indistinguishable genetic subtypes of Opitz G/BBB: X-linked Opitz G/BBB syndrome (XLOS), and autosomal dominant Opitz G/BBB syndrome (ADOS).","definition_xrefs":["Orphanet:2745"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"telecanthus","termid":"MONDO:0008537"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Opitz G/BBB syndrome","secondary_identifiers":["DOID:0050780","GARD:193","OMIMPS:300000","SCTID:81771002","DOID:0080697","ICD9:758.89","NCIT:C125487"],"synonyms":[{"name":"BBB syndrome","type":"related"},{"name":"G syndrome","type":"related"},{"name":"GBBB syndrome","type":"related"},{"name":"Opitz BBBG syndrome","type":"related"},{"name":"Opitz G syndrome","type":"exact"},{"name":"Opitz G/BBB syndrome","type":"exact"},{"name":"Opitz GBBB syndrome","type":"exact"},{"name":"Opitz syndrome","type":"exact"},{"name":"Opitz-Frias syndrome","type":"exact"},{"name":"Opitz-G syndrome, type 2","type":"related"},{"name":"Opitz-GBBB syndrome","type":"exact"},{"name":"hypertelorism hypospadias syndrome","type":"related"},{"name":"hypertelorism with esophageal abnormality and hypospadias","type":"related"},{"name":"hypertelorism-oesophageal abnormality-hypospadias syndrome","type":"exact"},{"name":"hypospadias-dysphagia syndrome","type":"exact"},{"name":"hypospadias-dysphagia, syndrome","type":"related"},{"name":"hypospadias-hypertelorism syndrome","type":"exact"},{"name":"telecanthus with associated abnormalities","type":"related"}],"termid":"MONDO:0017138","xrefs":{"Monarch":{"xref_id":"0017138"}}}


id: PR:O59816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04244","PANTHER:PTHR23151:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.07","secondary_identifiers":["UniProtKB:O59816"],"synonyms":[{"name":"PDC-E2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PDCE2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLAT","type":"exact"},{"name":"dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pyruvate dehydrogenase complex component E2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59816"}


id: PBO:0038604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase 1","termid":"PBO:0038604"}


id: PBO:0071841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 36","termid":"PBO:0071841"}


id: MONDO:1010734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic lupus erythematosus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus, non-human animal","termid":"MONDO:1010118"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, domestic cat","secondary_identifiers":["OMIA:000968-9685"],"termid":"MONDO:1010734","xrefs":{"Monarch":{"xref_id":"1010734"}}}


id: PBO:0114478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (adenine) methyltransferase activity Bmt2/human SAMTOR (S-adenosylmethionine sensor for the MTOR) ortholog","termid":"PBO:0114478"}


id: PBO:0076274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 2","termid":"PBO:0076274"}


id: SO:1000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that changes the amino acid sequence of the peptide in such a way that it changes the 3D structure of the molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000111 sequence_variant_affecting_3D_structure_of_polypeptide (obsolete SO:1000111)","synonyms":[{"name":"mutation affecting 3D structure of polypeptide","type":"related"},{"name":"mutation causing partially characterised 3D structural change","type":"related"},{"name":"mutation causing uncharacterised 3D structural change","type":"related"},{"name":"sequence variant affecting 3D structure of polypeptide","type":"exact"},{"name":"sequence variant affecting 3D-structure of polypeptide","type":"exact"},{"name":"sequence variant causing partially characterised 3D structural change","type":"exact"},{"name":"sequence variant causing uncharacterised 3D structural change","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_3D_structural_change","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_3D_structural_change","type":"exact"}],"termid":"SO:1000111"}


id: GO:0061678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular carbohydrate catabolic process that converts a carbohydrate to pyruvate and either glyceraldehyde or glyceraldehyde-3 phosphate by dehydration and aldol cleavage via a gluconate or 6-phosphogluconate intermediate.","definition_xrefs":["PMID:12921536","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"Entner-Doudoroff pathway","secondary_identifiers":["MetaCyc:Entner-Doudoroff-Pathways"],"termid":"GO:0061678"}


id: FYPO:0004186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing myriocin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal vegetative growth on myriocin","synonyms":[{"name":"normal cellular response to myriocin during vegetative growth","type":"related"},{"name":"normal vegetative cell population growth in presence of myriocin","type":"exact"},{"name":"normal vegetative cell population growth on myriocin","type":"exact"},{"name":"normal vegetative growth on myriocin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004186"}


id: PBO:0033798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0033798"}


id: SO:0001355
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methoxyuridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxyuridine","secondary_identifiers":["RNAMOD:063"],"synonyms":[{"name":"5-methoxyuridine","type":"exact"},{"name":"five methoxyuridine","type":"exact"},{"name":"mo5U","type":"exact"}],"termid":"SO:0001355"}


id: GO:0045006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from a nucleotide base in DNA. An example is the deamination of cytosine to produce uracil.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA deamination","termid":"GO:0045006"}


id: MONDO:0016923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 3 disorder","termid":"MONDO:0700010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 3","secondary_identifiers":["GARD:20844","Orphanet:262201","MEDGEN:1372547","SCTID:726341009","UMLS:C4518491"],"synonyms":[{"name":"partial duplication of chromosome type 3","type":"exact"},{"name":"partial trisomy of chromosome 3","type":"exact"}],"termid":"MONDO:0016923","xrefs":{"Monarch":{"xref_id":"0016923"}}}


id: GO:0007366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of cells to parasegments in the embryo, through the action of overlapping series of pair rule gene activities.","definition_xrefs":["ISBN:0632030488","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodic partitioning","termid":"GO:0007365"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periodic partitioning by pair rule gene","termid":"GO:0007366"}


id: PBO:0051219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-27 (pseudogene)","termid":"PBO:0051219"}


id: MONDO:0007019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory pathologic process that affects the vulva and the vagina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"},{"relation_name":"is_a","term_name":"vulvitis","termid":"MONDO:0007018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvovaginitis","secondary_identifiers":["NCIT:C35131","SCTID:53277000","MedDRA:10047794","UMLS:C0042998","EFO:1001240","DOID:2273","MEDGEN:12129","MESH:D014848"],"synonyms":[{"name":"Vulvo-vaginitis","type":"exact"}],"termid":"MONDO:0007019","xrefs":{"Monarch":{"xref_id":"0007019"}}}


id: GO:0052659
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110276],"is_not":false,"summary":null,"term":"GO:0052659"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate.","definition_xrefs":["RHEA:11392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol-polyphosphate 5-phosphatase activity","termid":"GO:0004445"},{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855213","MetaCyc:RXN-8730","Reactome:R-HSA-1855218","KEGG_REACTION:R03430"],"synonyms":[{"name":"D-myo-inositol (1,3,4,5)-polyphosphate 5-phosphatase activity","type":"exact"},{"name":"Ins(1,3,4,5)P(4) 5-phosphatase activity","type":"exact"},{"name":"Ins(1,3,4,5)P4 5-phosphatase activity","type":"exact"},{"name":"inositol polyphosphate-5-phosphatase activity","type":"broad"},{"name":"type I inositol-polyphosphate phosphatase activity","type":"related"},{"name":"type II inositol polyphosphate 5-phosphatase activity","type":"related"}],"termid":"GO:0052659","terms_by_termid":{"GO:0052659":null}}


id: PBO:0040049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 1B","termid":"PBO:0040049"}


id: PBO:0040213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 1","termid":"PBO:0040213"}


id: GO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a neutrophil.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil mediated immunity","termid":"GO:0002446"}


id: PBO:0064752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 88","termid":"PBO:0064752"}


id: GO:0032151
data:
  {"annotated_genes":["SJAG_04375","SJAG_00663","SJAG_01277","SJAG_03374"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58470,102073,102920,105873],"is_not":false,"summary":null,"term":"GO:0032151"}]},"cv_name":"cellular_component","definition":"A heterooligomeric septin complex that acts during mitotic cell division.","definition_xrefs":["PMID:16009555","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin complex","termid":"GO:0031105"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01277":null,"SJAG_03374":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitotic septin complex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0032151","terms_by_termid":{"GO:0032151":null}}


id: MONDO:0022977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic hernia exomphalos corpus callosum agenesis","termid":"MONDO:0022977","xrefs":{"Monarch":{"xref_id":"0022977"}}}


id: PBO:0073737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 4","termid":"PBO:0073737"}


id: PBO:0045510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 2","termid":"PBO:0045510"}


id: PBO:0049546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 9","termid":"PBO:0049546"}


id: PATO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000736 dysfunctional value (obsolete PATO:0000736)","termid":"PATO:0000736"}


id: PBO:0046225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 18","termid":"PBO:0046225"}


id: MONDO:0971105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"neonatal renal venous thrombosis","secondary_identifiers":["MEDGEN:1863518","UMLS:C5925061","Orphanet:664912"],"termid":"MONDO:0971105","xrefs":{"Monarch":{"xref_id":"0971105"}}}


id: PBO:0069001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 245, pseudogene","termid":"PBO:0069001"}


id: GO:0140668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of production of oxytocin.","definition_xrefs":["PMID:25096581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of oxytocin production","termid":"GO:0140667"},{"relation_name":"positively_regulates","term_name":"oxytocin production","termid":"GO:0036162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxytocin production","termid":"GO:0140668"}


id: PR:P40387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha,alpha-trehalose-phosphate synthase [UDP-forming] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.03","secondary_identifiers":["UniProtKB:P40387"],"synonyms":[{"name":"Spom972h-otsA","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40387"}


id: MONDO:0032779
data:
  {"annotated_genes":["SJAG_02561"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89128],"is_not":false,"summary":null,"term":"MONDO:0032779"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly and structural brain anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1677276","OMIM:618492","UMLS:C5193123"],"synonyms":[{"name":"NEDMIBA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY AND STRUCTURAL BRAIN ANOMALIES","type":"related"}],"termid":"MONDO:0032779","terms_by_termid":{"MONDO:0032779":null},"xrefs":{"Monarch":{"xref_id":"0032779"}}}


id: MONDO:1011239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, pig","secondary_identifiers":["OMIA:000649-9823"],"termid":"MONDO:1011239","xrefs":{"Monarch":{"xref_id":"1011239"}}}


id: MONDO:0859338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 78","secondary_identifiers":["MEDGEN:1824049","OMIM:620170","UMLS:C5774276","DOID:0070577"],"termid":"MONDO:0859338","xrefs":{"Monarch":{"xref_id":"0859338"}}}


id: GO:0009976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: delta-tocopherol = 2-methyl-6-phytyl-1,4-benzene-1,4-diol, gamma-tocopherol = 2,3-dimethyl-6-phytylbenzene-1,4-diol. delta-tocotrienol = 6-geranylgeranyl-2-methylbenzene-1,4-diol gamma-tocotrienol, and = 6-geranylgeranyl-2,3-dimethylbenzene-1,4-diol.","definition_xrefs":["EC:5.5.1.24","PMID:12213958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0009975"],"is_obsolete":false,"name":"tocopherol cyclase activity","termid":"GO:0009976"}


id: PBO:0013820
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimeric","termid":"PBO:0013820"}


id: FYPO:0003542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle pole body","termid":"FYPO:0002771"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000138","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole body","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole body","type":"exact"},{"name":"abolished protein localization to meiotic SPB","type":"exact"},{"name":"protein localization to meiotic spindle pole body abolished","type":"exact"}],"termid":"FYPO:0003542"}


id: GO:0141198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which ubiquitin monomers are attached to a protein, and then ubiquitin polymers are formed by linkages between lysine residues at various positions of the ubiquitin monomers, forming branched linkages, such as K11/K48- or K11/K63-linked chains.","definition_xrefs":["PMID:29033132","PMID:37325469","PMID:29378950","PMID:31998699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein branched polyubiquitination","termid":"GO:0141198"}


id: MONDO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process that affects the cervix. Causes include sexually transmitted diseases and bacterial infections. Clinical manifestations include abnormal vaginal bleeding and vaginal discharge.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervicitis","secondary_identifiers":["NCIT:C26716","HP:0030160","ICD9:616.0","icd11.foundation:1433247301","UMLS:C0007860","SCTID:37610005","MESH:D002575","ICD10CM:N72","DOID:2568","MEDGEN:3338"],"synonyms":[{"name":"cervicitis","type":"exact"},{"name":"cervicitis (disease)","type":"exact"}],"termid":"MONDO:0002345","xrefs":{"Monarch":{"xref_id":"0002345"}}}


id: PBO:0113128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic initiation factor eIF2A; associates specifically with both 40S subunits and 80S ribosomes, and interacts genetically with both eIF5b and eIF4E; physically interacts with Ssd1p, and associates with mRNAs encoding proteins required for cell wall organization, and some of which require the presence of Ssd1p; translational repressor of cell wall-related proteins; interacts physically and genetically with Xrn1p; homologous to mammalian eIF2A","termid":"PBO:0113128"}


id: PBO:0072269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 7","termid":"PBO:0072269"}


id: PBO:0119990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR2J3-UPK3BL2 readthrough","termid":"PBO:0119990"}


id: MONDO:0019062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare infectious disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare infectious disease (obsolete MONDO:0019062)","secondary_identifiers":["Orphanet:68416"],"synonyms":[{"name":"rare infectious disease","type":"exact"}],"termid":"MONDO:0019062","xrefs":{"Monarch":{"xref_id":"0019062"}}}


id: PBO:0005580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hir protein binding region","termid":"PBO:0005580"}


id: MONDO:0014473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CENPE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"},{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 13, primary, autosomal recessive","secondary_identifiers":["DOID:0070283","MEDGEN:863517","UMLS:C4015080","OMIM:616051","GARD:16054"],"synonyms":[{"name":"CENPE autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH13","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CENPE","type":"exact"},{"name":"microcephaly 13, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0014473","xrefs":{"Monarch":{"xref_id":"0014473"}}}


id: GO:0070756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-35 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-35 production","termid":"GO:0070754"},{"relation_name":"positively_regulates","term_name":"interleukin-35 production","termid":"GO:0070753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-35 production","secondary_identifiers":["GO:0070752"],"synonyms":[{"name":"activation of interleukin-35 production","type":"narrow"},{"name":"positive regulation of IL-35 production","type":"exact"},{"name":"positive regulation of interleukin-35 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-35 production","type":"narrow"},{"name":"up regulation of interleukin-35 production","type":"exact"},{"name":"up-regulation of interleukin-35 production","type":"exact"},{"name":"upregulation of interleukin-35 production","type":"exact"}],"termid":"GO:0070756"}


id: PR:O74445
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit S10B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04299","PANTHER:PTHR23073:SF10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease subunit rpt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.16","secondary_identifiers":["UniProtKB:O74445"],"synonyms":[{"name":"Spom972h-PSMC6","type":"exact"}],"termid":"PR:O74445"}


id: PBO:0029607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vegetative_cell","termid":"PBO:0029607"}


id: FYPO:0004473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that enters the cell cycle but then undergoes cell cycle arrest with unreplicated DNA, and eventually dies.","definition_xrefs":["PomBase:mah","PMID:9356477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with unreplicated DNA","termid":"FYPO:0001430"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, cell cycle arrest","termid":"FYPO:0001924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, cell cycle arrest with unreplicated DNA","synonyms":[{"name":"inviable following spore germination, without cell division, cell cycle arrest with unreplicated DNA","type":"exact"},{"name":"inviable germinated spore, without cell division, cell cycle arrest with unreplicated DNA","type":"exact"},{"name":"lethal after spore germination, without cell division, cell cycle arrest with unreplicated DNA","type":"exact"}],"termid":"FYPO:0004473"}


id: PBO:0083500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YOR083W","termid":"PBO:0083500"}


id: GO:0051473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"alditol biosynthetic process","termid":"GO:0019401"},{"relation_name":"is_a","term_name":"glucosylglycerol metabolic process","termid":"GO:0051472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucosylglycerol biosynthetic process","synonyms":[{"name":"glucosylglycerol anabolism","type":"exact"},{"name":"glucosylglycerol biosynthesis","type":"exact"},{"name":"glucosylglycerol formation","type":"exact"},{"name":"glucosylglycerol synthesis","type":"exact"}],"termid":"GO:0051473"}


id: MONDO:0013618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial anomalies and anterior segment dysgenesis syndrome","secondary_identifiers":["MEDGEN:481729","UMLS:C3280099","OMIM:614195"],"synonyms":[{"name":"CAASDS","type":"related"},{"name":"craniofacial anomalies and anterior segment dysgenesis syndrome","type":"exact"}],"termid":"MONDO:0013618","xrefs":{"Monarch":{"xref_id":"0013618"}}}


id: GO:0001517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-acetyl-D-glucosamine = adenosine 3',5'-bisphosphate + N-acetyl-D-glucosamine 6-sulfate.","definition_xrefs":["GOC:ai","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"N-acetylglucosamine 6-O-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2046222","Reactome:R-HSA-3656269","Reactome:R-HSA-6786012"],"synonyms":[{"name":"N-acetylglucosamine 6-O-sulphotransferase activity","type":"exact"}],"termid":"GO:0001517"}


id: FYPO:0007709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of a non-growing cell tip is decreased.","definition_xrefs":["PMID:23093943","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of non-growing cell tip","synonyms":[{"name":"decreased protein localisation to cell cortex of non-growing cell tip","type":"exact"},{"name":"decreased protein localization to cell cortex of new non-growing cell tip","type":"exact"},{"name":"decreased protein localization to cell cortex of non-growing cell end","type":"exact"},{"name":"decreased protein localization to cell cortex of non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell cortex of non-growing cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to non-growing cell tip cortex","type":"exact"},{"name":"reduced protein localization to cell cortex of non-growing cell tip","type":"exact"}],"termid":"FYPO:0007709"}


id: GO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + O2 = glutathione disulfide + H2O2.","definition_xrefs":["EC:1.8.3.3","RHEA:24112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutathione oxidase activity","secondary_identifiers":["KEGG_REACTION:R00120","MetaCyc:GLUTATHIONE-OXIDASE-RXN"],"synonyms":[{"name":"glutathione:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047950"}


id: GO:0051752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->4)-6-phospho-alpha-D-glucosyl](n) + n ATP + n H2O = [(1->4)-3,6-bisphospho-alpha-alpha-glucosyl](n) + n AMP + 2n H+ + n phosphate.","definition_xrefs":["PMID:15618411","RHEA:10256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"phosphoglucan, water dikinase activity","secondary_identifiers":["MetaCyc:2.7.9.5-RXN","EC:2.7.9.5"],"synonyms":[{"name":"ATP:phospho-alpha-glucan, water phosphotransferase activity","type":"related"},{"name":"OK1","type":"related"},{"name":"PWD","type":"related"}],"termid":"GO:0051752"}


id: PBO:0056196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA6 divergent transcript","termid":"PBO:0056196"}


id: FYPO:0001206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which maltase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal maltase activity","termid":"FYPO:0001184"},{"relation_name":"is_a","term_name":"abolished alpha-glucosidase activity","termid":"FYPO:0001205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished maltase activity","synonyms":[{"name":"maltase activity abolished","type":"exact"}],"termid":"FYPO:0001206"}


id: FYPO:0008262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mannosylinositol phosphorylceramide  measured in a cell is too low to detect.","definition_xrefs":["PMID:20388730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular mannosylinositol phosphorylceramide level","termid":"FYPO:0008261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"mannosylinositol phosphorylceramide absent from cell","termid":"FYPO:0008262"}


id: GO:0051360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP506 chromophore cross-link from the alpha-carboxyl carbon of residue n, an asparagine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["PMID:10504696","RESID:AA0380"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-asparagine 5-imidazolinone glycine (obsolete GO:0051360)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-asparagine 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-asparagine 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051360"}


id: PBO:0050124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 34","termid":"PBO:0050124"}


id: PBO:0113127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Duo1p and Pse1p to connect the DASH complex with the microtubules (MT); couples kinetochores to the force produced by MT depolymerization, thereby aiding in chromosome segregation; N-terminal staple region is important for self-assembly of the Dam1 complex higher order ring structure that forms around microtubules; Ipl1p target for regulating kinetochore-MT attachments","termid":"PBO:0113127"}


id: GO:0140245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates translation occurring at the postsynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation at synapse","termid":"GO:0140243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation at postsynapse","termid":"GO:0140245"}


id: MONDO:0033655
data:
  {"annotated_genes":["SJAG_01355"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87666],"is_not":false,"summary":null,"term":"MONDO:0033655"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01355":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 20","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619064","DOID:0070505","MEDGEN:1771040","UMLS:C5436726","GARD:16417"],"synonyms":[{"name":"MC4DN20","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 20","type":"exact"}],"termid":"MONDO:0033655","terms_by_termid":{"MONDO:0033655":null},"xrefs":{"Monarch":{"xref_id":"0033655"}}}


id: MONDO:0850285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intrinsic asthma that is characterized by exposure to tobacco smoke and other inflammatory gasses or particulate matter.","definition_xrefs":["DOID:0080819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic asthma","termid":"MONDO:0004765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"environmental induced asthma","termid":"MONDO:0850285","xrefs":{"Monarch":{"xref_id":"0850285"}}}


id: PBO:0064790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1J divergent transcript","termid":"PBO:0064790"}


id: MONDO:0009391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypermetabolism due to defect in mitochondria","secondary_identifiers":["MEDGEN:344612","MESH:C565498","UMLS:C1855926","OMIM:238800"],"synonyms":[{"name":"hypermetabolism due to defect in mitochondria","type":"exact"},{"name":"hypermetabolism due to uncoupled mitochondrial oxidative phosphorylation 1","type":"exact"}],"termid":"MONDO:0009391","xrefs":{"Monarch":{"xref_id":"0009391"}}}


id: GO:1903592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lysozyme activity.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:23954697","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lysozyme activity","synonyms":[{"name":"activation of 1,4-N-acetylmuramidase activity","type":"narrow"},{"name":"activation of L-7001","type":"related"},{"name":"activation of N,O-diacetylmuramidase activity","type":"narrow"},{"name":"activation of PR1-lysozyme","type":"related"},{"name":"activation of globulin G","type":"related"},{"name":"activation of globulin G1","type":"related"},{"name":"activation of lysozyme activity","type":"narrow"},{"name":"activation of lysozyme g","type":"related"},{"name":"activation of mucopeptide N-acetylmuramoylhydrolase activity","type":"narrow"},{"name":"activation of mucopeptide glucohydrolase activity","type":"narrow"},{"name":"activation of muramidase activity","type":"narrow"},{"name":"activation of peptidoglycan N-acetylmuramoylhydrolase activity","type":"narrow"},{"name":"positive regulation of 1,4-N-acetylmuramidase activity","type":"exact"},{"name":"positive regulation of L-7001","type":"related"},{"name":"positive regulation of N,O-diacetylmuramidase activity","type":"exact"},{"name":"positive regulation of PR1-lysozyme","type":"related"},{"name":"positive regulation of globulin G","type":"related"},{"name":"positive regulation of globulin G1","type":"related"},{"name":"positive regulation of lysozyme g","type":"related"},{"name":"positive regulation of mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"positive regulation of mucopeptide glucohydrolase activity","type":"exact"},{"name":"positive regulation of muramidase activity","type":"exact"},{"name":"positive regulation of peptidoglycan N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"up regulation of 1,4-N-acetylmuramidase activity","type":"exact"},{"name":"up regulation of L-7001","type":"related"},{"name":"up regulation of N,O-diacetylmuramidase activity","type":"exact"},{"name":"up regulation of PR1-lysozyme","type":"related"},{"name":"up regulation of globulin G","type":"related"},{"name":"up regulation of globulin G1","type":"related"},{"name":"up regulation of lysozyme activity","type":"exact"},{"name":"up regulation of lysozyme g","type":"related"},{"name":"up regulation of mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"up regulation of mucopeptide glucohydrolase activity","type":"exact"},{"name":"up regulation of muramidase activity","type":"exact"},{"name":"up regulation of peptidoglycan N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"up-regulation of 1,4-N-acetylmuramidase activity","type":"exact"},{"name":"up-regulation of L-7001","type":"related"},{"name":"up-regulation of N,O-diacetylmuramidase activity","type":"exact"},{"name":"up-regulation of PR1-lysozyme","type":"related"},{"name":"up-regulation of globulin G","type":"related"},{"name":"up-regulation of globulin G1","type":"related"},{"name":"up-regulation of lysozyme activity","type":"exact"},{"name":"up-regulation of lysozyme g","type":"related"},{"name":"up-regulation of mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"up-regulation of mucopeptide glucohydrolase activity","type":"exact"},{"name":"up-regulation of muramidase activity","type":"exact"},{"name":"up-regulation of peptidoglycan N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"upregulation of 1,4-N-acetylmuramidase activity","type":"exact"},{"name":"upregulation of L-7001","type":"related"},{"name":"upregulation of N,O-diacetylmuramidase activity","type":"exact"},{"name":"upregulation of PR1-lysozyme","type":"related"},{"name":"upregulation of globulin G","type":"related"},{"name":"upregulation of globulin G1","type":"related"},{"name":"upregulation of lysozyme activity","type":"exact"},{"name":"upregulation of lysozyme g","type":"related"},{"name":"upregulation of mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"upregulation of mucopeptide glucohydrolase activity","type":"exact"},{"name":"upregulation of muramidase activity","type":"exact"},{"name":"upregulation of peptidoglycan N-acetylmuramoylhydrolase activity","type":"exact"}],"termid":"GO:1903592"}


id: PBO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Pas1/PHO80 domain containing 1","termid":"PBO:0043477"}


id: PBO:0083145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF DAL81/YIR023W","termid":"PBO:0083145"}


id: MONDO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"mycotic corneal ulcer","secondary_identifiers":["MEDGEN:509769","ICD10CM:H16.06","DOID:10440","icd11.foundation:1756043578","ICD9:370.05","SCTID:397977001","UMLS:C0155071"],"termid":"MONDO:0001033","xrefs":{"Monarch":{"xref_id":"0001033"}}}


id: MOD:00125
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to hypusine, N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["DeltaMass:0","PubMed:8108861","RESID:AA0116","Unimod:379#K","PubMed:6806267"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-deoxyhypusine","termid":"MOD:01880"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"4-aminobutylated residue","termid":"MOD:01884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypusine","synonyms":[{"name":"(2S)-2-amino-6-([(2R)-4-amino-2-hydroxybutyl]amino)hexanoic acid","type":"exact"},{"name":"(2S,9R)-2,11-diazanyl-9-hydroxy-7-azaundecanoic acid","type":"exact"},{"name":"(2S,9R)-hypusine","type":"exact"},{"name":"2-azanyl-6-[(4-azanyl-2-hydroxybutyl)azanyl]hexanoic acid","type":"exact"},{"name":"Hypu","type":"exact"},{"name":"Hypusine","type":"related"},{"name":"L-hypusine","type":"exact"},{"name":"MOD_RES Hypusine","type":"exact"},{"name":"N-(4-NH2-2-OH-butyl)- (of Lysine)","type":"exact"},{"name":"N6-(4-amino-2-hydroxybutyl)-L-lysine","type":"exact"},{"name":"hypusine","type":"related"}],"termid":"MOD:00125"}


id: GO:0044304
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The main axonal trunk, as opposed to the collaterals; i.e., excluding collaterals, terminal, spines, or dendrites.","definition_xrefs":["NIF_Subcellular:sao1596975044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"main axon","synonyms":[{"name":"axon shaft","type":"related"},{"name":"axon trunk","type":"exact"},{"name":"axonal shaft","type":"related"}],"termid":"GO:0044304"}


id: PBO:0080684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain, phosphoinositide interacting 1","termid":"PBO:0080684"}


id: PBO:0057102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR194-2 host gene","termid":"PBO:0057102"}


id: MONDO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of renal cell carcinoma. It is a well-circumscribed multicystic mass without solid areas. The inner lining of the cystic structures is composed of clear cells.","definition_xrefs":["NCIT:C4524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell renal carcinoma","termid":"MONDO:0005005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"multilocular clear cell renal cell carcinoma","secondary_identifiers":["ICD9:189.0","MEDGEN:87547","GARD:21417","Orphanet:319287","SCTID:254916002","ICDO:8316/3","UMLS:C0346249","DOID:4463"],"synonyms":[{"name":"MCRCC","type":"exact"},{"name":"cystadenocarcinoma of kidney","type":"exact"},{"name":"multilocular clear cell adenocarcinoma","type":"exact"},{"name":"multilocular clear cell carcinoma","type":"exact"},{"name":"multilocular clear cell renal cell adenocarcinoma","type":"exact"},{"name":"multilocular clear cell renal cell carcinoma","type":"exact"},{"name":"multilocular cystic clear cell renal cell neoplasm of low malignant potential","type":"exact"},{"name":"multilocular cystic renal cell adenocarcinoma","type":"exact"},{"name":"multilocular cystic renal cell cancer","type":"exact"},{"name":"multilocular cystic renal cell carcinoma","type":"exact"},{"name":"multilocular cystic renal neoplasm of low malignant potential","type":"related"},{"name":"renal cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0003010","xrefs":{"Monarch":{"xref_id":"0003010"}}}


id: GO:0071114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to tumstatin, the NC1 domain of the alpha3 chain of type IV collagen.","definition_xrefs":["PMID:12682293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-tumstatin complex","synonyms":[{"name":"ITGAV-ITGB3-COL4A3 complex","type":"narrow"}],"termid":"GO:0071114"}


id: GO:2000732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of termination of RNA polymerase I transcription.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase I","termid":"GO:0045943"},{"relation_name":"is_a","term_name":"positive regulation of termination of DNA-templated transcription","termid":"GO:0060566"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase I transcription","termid":"GO:2000730"},{"relation_name":"positively_regulates","term_name":"termination of RNA polymerase I transcription","termid":"GO:0006363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"positive regulation of termination of RNA polymerase I transcription","synonyms":[{"name":"positive regulation of RNA polymerase I transcription termination","type":"exact"},{"name":"positive regulation of transcription termination from Pol I promoter","type":"exact"},{"name":"positive regulation of transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2000732"}


id: PBO:0051849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 4","termid":"PBO:0051849"}


id: GO:0140853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + glycyl-L-cysteinyl-[protein] + H+ = [protein]-C-terminal glycyl cholesterol ester + N-terminal L-cysteinyl-[protein].","definition_xrefs":["RHEA:59504","PMID:8824192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"cholesterol-protein transferase activity","synonyms":[{"name":"cholesterol transferase activity","type":"broad"}],"termid":"GO:0140853"}


id: MONDO:0018010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"juvenile idiopathic inflammatory myopathy","secondary_identifiers":["MEDGEN:1842624","Orphanet:329888","UMLS:C5679857","GARD:21496"],"synonyms":[{"name":"JIIM","type":"exact"}],"termid":"MONDO:0018010","xrefs":{"Monarch":{"xref_id":"0018010"}}}


id: PBO:0054437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1833","termid":"PBO:0054437"}


id: GO:1990678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of an acetyl group from lysine at position 16 of the histone.","definition_xrefs":["PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K16 deacetylation (obsolete GO:1990678)","termid":"GO:1990678"}


id: FYPO:0003226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein localization to mitotic spindle","synonyms":[{"name":"delayed onset of protein localisation to mitotic spindle","type":"exact"},{"name":"delayed onset of protein localization to spindle during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein mitotic spindle to mitotic spindle during vegetative growth","type":"exact"},{"name":"delayed protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0003226"}


id: FYPO:0005477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"normal protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"normal protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005477"}


id: PBO:0027300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_primary_amine_oxidase_activity","termid":"PBO:0027300"}


id: PBO:0035847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_domain_during_vegetative_growth","termid":"PBO:0035847"}


id: MONDO:0859354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone metabolism, abnormal","termid":"MONDO:0031432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone metabolism, abnormal, 3","secondary_identifiers":["UMLS:C5774292","OMIM:620198","MEDGEN:1824065"],"termid":"MONDO:0859354","xrefs":{"Monarch":{"xref_id":"0859354"}}}


id: PATO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the back or upper surface of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed dorsal","synonyms":[{"name":"splayed posterior (human torso)","type":"related"}],"termid":"PATO:0002151"}


id: GO:0004051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoate + O2 = H2O + leukotriene A4.","definition_xrefs":["RHEA:32307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"arachidonate 5-lipoxygenase activity","secondary_identifiers":["EC:1.13.11.34"],"synonyms":[{"name":"5-delta-lipoxygenase activity","type":"related"},{"name":"5-lipoxygenase activity","type":"related"},{"name":"5Delta-lipoxygenase activity","type":"related"},{"name":"C-5-lipoxygenase activity","type":"related"},{"name":"LTA synthase activity","type":"narrow"},{"name":"arachidonate:oxygen 5-oxidoreductase activity","type":"related"},{"name":"arachidonic 5-lipoxygenase activity","type":"related"},{"name":"arachidonic acid 5-lipoxygenase activity","type":"related"},{"name":"delta(5)-lipoxygenase activity","type":"related"},{"name":"delta5-lipoxygenase activity","type":"related"},{"name":"leukotriene A4 synthase","type":"broad"},{"name":"leukotriene-A(4) synthase activity","type":"narrow"},{"name":"leukotriene-A4 synthase activity","type":"related"}],"termid":"GO:0004051"}


id: MOD:01509
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["OMSSA:178","OMSSA:213","Unimod:214#Y","Unimod:889#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ117Y","type":"exact"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"},{"name":"mTRAQ heavy on Y","type":"exact"}],"termid":"MOD:01509"}


id: PBO:0031171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_following_normal_mitotic_entry","termid":"PBO:0031171"}


id: PBO:0076801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 2","termid":"PBO:0076801"}


id: GO:0019862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of an IgA isotype.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IgA binding","termid":"GO:0019862"}


id: PBO:0026860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_arm_condensation","termid":"PBO:0026860"}


id: PBO:0053543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 548","termid":"PBO:0053543"}


id: MONDO:0045017
data:
  {"annotated_genes":["SJAG_03024","SJAG_03509","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88539,88540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[89165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of cholesterol biosynthetic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"},{"relation_name":"is_a","term_name":"cholesterol metabolism disease","termid":"MONDO:0045008"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03024":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"cholesterol biosynthetic process disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0342829","SCTID:238036004","MEDGEN:575241"],"synonyms":[{"name":"cholesterol synthesis disease","type":"exact"},{"name":"disorder of cholesterol biosynthetic process","type":"exact"},{"name":"disorder of cholesterol synthesis","type":"exact"}],"termid":"MONDO:0045017","terms_by_termid":{"MONDO:0010035":null,"MONDO:0011816":null},"xrefs":{"Monarch":{"xref_id":"0045017"}}}


id: PR:O94301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hfi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator hfi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.18c","synonyms":[{"name":"Spom972h-hfi1","type":"exact"}],"termid":"PR:O94301"}


id: MONDO:0020033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of digestive system neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare digestive tumor (obsolete MONDO:0020033)","secondary_identifiers":["Orphanet:98059"],"synonyms":[{"name":"rare digestive cancer","type":"exact"},{"name":"rare digestive neoplasm","type":"exact"},{"name":"rare digestive system neoplasm","type":"exact"}],"termid":"MONDO:0020033","xrefs":{"Monarch":{"xref_id":"0020033"}}}


id: PBO:0090058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Fol2","termid":"PBO:0090058"}


id: GO:0052379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent to which it enters into a second organism via the phagocytotic processes of the other organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of entry into other organism via phagocytosis involved in symbiotic interaction (obsolete GO:0052379)","synonyms":[{"name":"modulation by organism of entry into other organism via other organism phagocytosis during symbiotic interaction","type":"related"},{"name":"modulation by organism of entry into other organism via phagocytosis during symbiotic interaction","type":"related"}],"termid":"GO:0052379"}


id: GO:0009190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"cyclic nucleotide metabolic process","termid":"GO:0009187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyclic nucleotide biosynthetic process","synonyms":[{"name":"cyclic nucleotide anabolism","type":"exact"},{"name":"cyclic nucleotide biosynthesis","type":"exact"},{"name":"cyclic nucleotide formation","type":"exact"},{"name":"cyclic nucleotide synthesis","type":"exact"}],"termid":"GO:0009190"}


id: PBO:0027915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0027915"}


id: MONDO:0000790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Salmo salar.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete Atlantic salmon allergy (obsolete MONDO:0000790)","secondary_identifiers":["DOID:0060515"],"synonyms":[{"name":"Salmo salar allergic disease","type":"exact"},{"name":"Salmo salar caused allergic disease","type":"exact"},{"name":"Salmo salar fish allergy","type":"exact"},{"name":"allergy of Salmo salar","type":"exact"}],"termid":"MONDO:0000790","xrefs":{"Monarch":{"xref_id":"0000790"}}}


id: MONDO:0017143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Genetic infertility.","gene_count":0,"genotype_count":0,"name":"obsolete genetic infertility (obsolete MONDO:0017143)","secondary_identifiers":["Orphanet:275742"],"synonyms":[{"name":"genetic infertility","type":"exact"},{"name":"hereditary infertility disorder","type":"exact"}],"termid":"MONDO:0017143","xrefs":{"Monarch":{"xref_id":"0017143"}}}


id: PBO:0029142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_torin1","termid":"PBO:0029142"}


id: PBO:0057513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 631","termid":"PBO:0057513"}


id: MOD:02024
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a cervonoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"cervonoylated residue","termid":"MOD:02024"}


id: MONDO:0004528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myofibroblastoma arising from the inguinal lymph nodes. It is characterized by the presence of nuclear palisading.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lymph node cancer","termid":"MONDO:0001082"},{"relation_name":"is_a","term_name":"lymph node neoplasm","termid":"MONDO:0024339"},{"relation_name":"is_a","term_name":"myofibroblastoma","termid":"MONDO:0040675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"lymph node palisaded myofibroblastoma","secondary_identifiers":["MEDGEN:757257","NCIT:C6584","DOID:8304","UMLS:C3164851"],"synonyms":[{"name":"palisaded lymph node myofibroblastoma","type":"exact"},{"name":"palisaded myofibroblastoma of lymph node","type":"exact"},{"name":"palisaded myofibroblastoma of the lymph node","type":"exact"}],"termid":"MONDO:0004528","xrefs":{"Monarch":{"xref_id":"0004528"}}}


id: GO:0005669
data:
  {"annotated_genes":["SJAG_01808","SJAG_00741","SJAG_04977","SJAG_04917","SJAG_03900","SJAG_00421","SJAG_00584","SJAG_00735","SJAG_00872","SJAG_04654","SJAG_04274","SJAG_02541","SJAG_01475","SJAG_03107","SJAG_03285","SJAG_02458"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58346,60180,69789,71788,72531,73259,75538,76330,76848,77461,78598,78726,82215,97526,105567,119568],"is_not":false,"summary":null,"term":"GO:0005669"}]},"cv_name":"cellular_component","definition":"A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters.","definition_xrefs":["ISBN:0879695501","GOC:mah","ISBN:0471953393","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00584":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00872":null,"SJAG_01475":null,"SJAG_01808":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_03107":null,"SJAG_03285":null,"SJAG_03900":null,"SJAG_04274":null,"SJAG_04654":null,"SJAG_04917":null,"SJAG_04977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005654"],"is_obsolete":false,"name":"transcription factor TFIID complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005669","terms_by_termid":{"GO:0005669":null}}


id: PBO:0005192
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.3","termid":"PBO:0005192"}


id: GO:1900045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein K63-linked ubiquitination","termid":"GO:1900044"},{"relation_name":"is_a","term_name":"negative regulation of protein polyubiquitination","termid":"GO:1902915"},{"relation_name":"negatively_regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein K63-linked ubiquitination","synonyms":[{"name":"down regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"down regulation of protein K63-linked ubiquitination","type":"related"},{"name":"down-regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"down-regulation of protein K63-linked ubiquitination","type":"related"},{"name":"downregulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"downregulation of protein K63-linked ubiquitination","type":"related"},{"name":"inhibition of protein K63-linked polyubiquitination","type":"exact"},{"name":"inhibition of protein K63-linked ubiquitination","type":"related"},{"name":"negative regulation of protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:1900045"}


id: PBO:0059783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 9","termid":"PBO:0059783"}


id: GO:0070055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The endonucleolytic cleavage of a mRNA containing an HAC1-type intron at the 5' and 3' splice sites. The cleavage step is part of unconventional mRNA splicing, and contributes to the endoplasmic reticulum unfolded protein response.","definition_xrefs":["PMID:10357823","GOC:krc","GOC:bf","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA endonucleolytic cleavage involved in unfolded protein response (obsolete GO:0070055)","synonyms":[{"name":"ERN1-mediated XBP-1 mRNA cleavage","type":"related"},{"name":"HAC1 mRNA cleavage","type":"narrow"},{"name":"HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"XBP1 mRNA cleavage","type":"narrow"}],"termid":"GO:0070055"}


id: PBO:0065532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 4","termid":"PBO:0065532"}


id: SO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence GTGRGAA, bound by CSL (CBF1/RBP-JK/Suppressor of Hairless/LAG-1) transcription factors.","definition_xrefs":["PMID:19101542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSL_response_element","synonyms":[{"name":"CSL response element","type":"exact"}],"termid":"SO:0001839"}


id: PBO:0027998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_polar_cell_growth","termid":"PBO:0027998"}


id: GO:0097506
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004844"}]},"cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated bases.","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"deaminated base DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"DNA glycosylase activity acting on deaminated bases","type":"exact"},{"name":"deaminated base DNA glycosylase activity","type":"exact"}],"termid":"GO:0097506","terms_by_termid":{"GO:0004844":null}}


id: PBO:0056421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1 pseudogene 2","termid":"PBO:0056421"}


id: PBO:0055131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2550","termid":"PBO:0055131"}


id: MONDO:0010896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pigment-dispersion syndrome is an eye disorder that occurs when pigment granules that normally adhere to the back of the iris (the colored part of the eye) flake off into the clear fluid produced by the eye (aqueous humor). These pigment granules may flow towards the drainage canals of the eye, slowly clogging them and raising the pressure within the eye (intraocular pressure or IOP). This rise in eye pressure can cause damage to the optic nerve (the nerve in the back of the eye that carries visual images to the brain). If the optic nerve becomes damaged, pigment-dispersion syndrome becomes pigmentary glaucoma. This happens in about 30% of cases. Pigment-dispersion syndrome commonly presents between the second and fourth decades, which is earlier than other types of glaucoma. While men and women are affected in equal numbers, men develop pigmentary glaucoma up to 3 times more often than women. Myopia (nearsightedness) appears to be an important risk factor in the development of pigment-dispersion syndrome and is present in up to 80% of affected individuals. The condition may be sporadic or follow an autosomal dominant pattern of inheritance with reduced penetrance. At least one gene locus on chromosome 7 has been identified. Pigment-dispersion syndrome can be treated with eye drops or other medications. In some cases, laser surgery may be performed.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pigment dispersion syndrome","secondary_identifiers":["NCIT:C187288","SCTID:392133001","OMIM:600510","DOID:0060680","MEDGEN:220866","UMLS:C1271398","GARD:4356","MESH:C563184","Orphanet:26823"],"synonyms":[{"name":"GPDS1","type":"related"},{"name":"glaucoma, pigment-dispersion type","type":"related"},{"name":"glaucoma-RELATED pigment dispersion syndrome","type":"related"},{"name":"glaucoma-related pigment dispersion syndrome","type":"exact"},{"name":"pigment dispersion syndrome","type":"exact"},{"name":"pigment-dispersion syndrome","type":"related"},{"name":"pigment-dispersion type glaucoma","type":"exact"}],"termid":"MONDO:0010896","xrefs":{"Monarch":{"xref_id":"0010896"}}}


id: FYPO:0007260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is abnormal in the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}


id: GO:1902987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysine biosynthetic process via aminoadipic acid.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:8590464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via aminoadipic acid","termid":"GO:1902986"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"lysine biosynthetic process via aminoadipic acid","termid":"GO:0019878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"negative regulation of lysine biosynthetic process via aminoadipic acid","synonyms":[{"name":"down regulation of lysine biosynthetic process via aminoadipic acid","type":"exact"},{"name":"down regulation of lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"down regulation of lysine anabolism via aminoadipic acid","type":"exact"},{"name":"down regulation of lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"down regulation of lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"down regulation of lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"down regulation of lysine formation via aminoadipic acid","type":"exact"},{"name":"down regulation of lysine synthesis via aminoadipic acid","type":"exact"},{"name":"down-regulation of lysine anabolism via aminoadipic acid","type":"exact"},{"name":"down-regulation of lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"down-regulation of lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"down-regulation of lysine biosynthetic process via aminoadipic acid","type":"exact"},{"name":"down-regulation of lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"down-regulation of lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"down-regulation of lysine formation via aminoadipic acid","type":"exact"},{"name":"down-regulation of lysine synthesis via aminoadipic acid","type":"exact"},{"name":"downregulation of lysine anabolism via aminoadipic acid","type":"exact"},{"name":"downregulation of lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"downregulation of lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"downregulation of lysine biosynthetic process via aminoadipic acid","type":"exact"},{"name":"downregulation of lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"downregulation of lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"downregulation of lysine formation via aminoadipic acid","type":"exact"},{"name":"downregulation of lysine synthesis via aminoadipic acid","type":"exact"},{"name":"inhibition of lysine anabolism via aminoadipic acid","type":"narrow"},{"name":"inhibition of lysine biosynthesis, aminoadipic acid pathway","type":"narrow"},{"name":"inhibition of lysine biosynthesis, aminoadipic pathway","type":"narrow"},{"name":"inhibition of lysine biosynthetic process via aminoadipic acid","type":"narrow"},{"name":"inhibition of lysine biosynthetic process, aminoadipic acid pathway","type":"narrow"},{"name":"inhibition of lysine biosynthetic process, aminoadipic pathway","type":"narrow"},{"name":"inhibition of lysine formation via aminoadipic acid","type":"narrow"},{"name":"inhibition of lysine synthesis via aminoadipic acid","type":"narrow"},{"name":"negative regulation of lysine anabolism via aminoadipic acid","type":"exact"},{"name":"negative regulation of lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"negative regulation of lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"negative regulation of lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"negative regulation of lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"negative regulation of lysine formation via aminoadipic acid","type":"exact"},{"name":"negative regulation of lysine synthesis via aminoadipic acid","type":"exact"}],"termid":"GO:1902987"}


id: PBO:0055822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lecithin retinol acyltransferase","termid":"PBO:0055822"}


id: MONDO:0005879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ocular toxoplasmosis is an infection in the eye caused by the parasite, Toxoplasm a gondii. Toxoplasmosis is the most common cause of eye inflammation in the world. Toxoplamosis can beacquired or present at birth (congenital), having crossed the placenta from a newly infected mother to her fetus. Most humans acquire toxoplasmosis by eating raw or undercooked meat, vegetables or milk products, or by coming into contact with infected cat litterbox or sandboxes.In humans,the infectionusually causes no symptoms, and resolves without treatment in a few months. In individuals with compromised immune systems, Toxoplasm a gondii can reactivate to cause disease. Reactivation of a congenital infection was traditionally thought to be the most common cause ofocular toxoplasmosis, but an acquired infection is now considered to be more common. A toxoplasmosis infection that affects the eye usually attacks the retina andinitially resolves without symptoms. However,the inactive parasite maylaterreactivate causing eyepain, blurred vision, and possibly permanent damage, including blindness. Although most cases of toxoplasmosis resolve on their own,for some,inflammation can be treated with antibiotics and steroids.","direct_ancestors":[{"relation_name":"is_a","term_name":"toxoplasmosis","termid":"MONDO:0005989"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular toxoplasmosis","secondary_identifiers":["MEDGEN:21599","UMLS:C0040561","SCTID:416481006","EFO:0007399","ICD9:130.7","MESH:D014126"],"termid":"MONDO:0005879","xrefs":{"Monarch":{"xref_id":"0005879"}}}


id: GO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-4 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-4 receptor binding","synonyms":[{"name":"IL-4","type":"narrow"},{"name":"interleukin-4 receptor ligand","type":"narrow"}],"termid":"GO:0005136"}


id: GO:0050825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ice, water reduced to the solid state by cold temperature. It is a white or transparent colorless substance, crystalline, brittle, and viscoidal.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ice binding","synonyms":[{"name":"ice crystal binding","type":"exact"},{"name":"ice nucleation inhibitor activity","type":"related"}],"termid":"GO:0050825"}


id: GO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by biochemical signaling: hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure mediated by a chemical signal","synonyms":[{"name":"blood pressure regulation mediated by a chemical signal","type":"exact"}],"termid":"GO:0003044"}


id: MONDO:0002367
data:
  {"annotated_genes":["SJAG_01144","SJAG_00440","SJAG_03677","SJAG_02231","SJAG_03787"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[88078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88704,88705,88706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","definition":"Primary or metastatic malignant neoplasm involving the kidney.","definition_xrefs":["NCIT:C7548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant urinary system neoplasm","termid":"MONDO:0006295"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_01144":null,"SJAG_02231":null,"SJAG_03677":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"kidney cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D007680","ICD9:189.0","DOID:263","SCTID:363518003","MEDGEN:149263","UMLS:C0740457"],"synonyms":[{"name":"cancer of kidney","type":"exact"},{"name":"kidney cancer","type":"exact"},{"name":"malignant kidney neoplasm","type":"exact"},{"name":"malignant kidney tumor","type":"exact"},{"name":"malignant kidney tumour","type":"exact"},{"name":"malignant neoplasm of kidney","type":"exact"},{"name":"malignant neoplasm of kidney except pelvis","type":"exact"},{"name":"malignant neoplasm of the kidney","type":"exact"},{"name":"malignant renal neoplasm","type":"exact"},{"name":"malignant renal tumor","type":"exact"},{"name":"malignant renal tumour","type":"exact"},{"name":"malignant tumor of kidney","type":"exact"},{"name":"malignant tumor of the kidney","type":"exact"},{"name":"malignant tumour of kidney","type":"exact"},{"name":"malignant tumour of the kidney","type":"exact"}],"termid":"MONDO:0002367","terms_by_termid":{"MONDO:0003789":null,"MONDO:0007763":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002367"}}}


id: PBO:0074414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 15","termid":"PBO:0074414"}


id: PBO:0040713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 antisense RNA 1","termid":"PBO:0040713"}


id: MONDO:0014874
data:
  {"annotated_genes":["SJAG_04907"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88011],"is_not":false,"summary":null,"term":"MONDO:0014874"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the TSEN15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 2","termid":"MONDO:0016759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 2F","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934724","UMLS:C4310757","GARD:16178","OMIM:617026","DOID:0112329"],"synonyms":[{"name":"PCH2F","type":"exact"},{"name":"TSEN15 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in TSEN15","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2F","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2F; PCH2F","type":"exact"}],"termid":"MONDO:0014874","terms_by_termid":{"MONDO:0014874":null},"xrefs":{"Monarch":{"xref_id":"0014874"}}}


id: PBO:0050570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hornerin","termid":"PBO:0050570"}


id: PBO:0046609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 11","termid":"PBO:0046609"}


id: PBO:0045144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 1","termid":"PBO:0045144"}


id: GO:0075274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of zygosporangium development","termid":"GO:0075272"},{"relation_name":"negatively_regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of zygosporangium development","termid":"GO:0075274"}


id: MOD:00438
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a myristoyl group.","definition_xrefs":["DeltaMass:0","Unimod:45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"myristoylated residue","synonyms":[{"name":"C14:0 aliphatic acylated residue","type":"exact"},{"name":"MyrRes","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"exact"}],"termid":"MOD:00438"}


id: FYPO:0003626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to shmoo tip","synonyms":[{"name":"normal protein localisation to shmoo tip","type":"exact"},{"name":"normal protein localization to mating projection tip","type":"exact"},{"name":"normal protein localization to shmoo projection","type":"exact"}],"termid":"FYPO:0003626"}


id: PBO:0059987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 7","termid":"PBO:0059987"}


id: PBO:0109051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL3 pseudogene 2","termid":"PBO:0109051"}


id: PBO:0067919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 221","termid":"PBO:0067919"}


id: PBO:0057029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 125b-1","termid":"PBO:0057029"}


id: FYPO:0001479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal alpha,alpha-trehalase activity","synonyms":[{"name":"abnormal neutral trehalase activity","type":"exact"},{"name":"abnormal trehalase activity","type":"broad"}],"termid":"FYPO:0001479"}


id: PATO:0000498
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased duration","secondary_identifiers":["PATO:0000715"],"synonyms":[{"name":"chronic","type":"related"},{"name":"high time","type":"exact"},{"name":"increased period","type":"exact"},{"name":"increased time","type":"exact"},{"name":"prolonged period","type":"related"},{"name":"slow time","type":"related"}],"termid":"PATO:0000498"}


id: PBO:0027266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-two_cell_divisions_prior_to_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_pheromone","termid":"PBO:0027266"}


id: GO:0043803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: demethylspheroidene + S-adenosyl-L-methionine = H+ + S-adenosyl-L-homocysteine + spheroidene.","definition_xrefs":["PMID:12770713","RHEA:30903","PMID:12664193","PMID:7358679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"hydroxyneurosporene-O-methyltransferase activity","secondary_identifiers":["EC:2.1.1.210"],"synonyms":[{"name":"1-HO-carotenoid methylase","type":"related"},{"name":"1-hydroxycarotenoid O-methylase","type":"related"},{"name":"1-hydroxycarotenoid methylase","type":"related"},{"name":"demethylspheroidene O-methyltransferase","type":"related"}],"termid":"GO:0043803"}


id: GO:0031484
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XIV myosin heavy chain and associated light chains; myosin XIV heavy chains are the simplest known, containing a motor domain, no classic IQ motif and variable length tails.","definition_xrefs":["PMID:10722873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"myosin XIV complex","termid":"GO:0031484"}


id: GO:0090547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of low humidity stimulus, reduced moisture in the atmosphere.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to humidity","termid":"GO:0009270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low humidity","termid":"GO:0090547"}


id: FYPO:0000193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which a cellular response to osmotic stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to osmotic stress","synonyms":[{"name":"abnormal cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000193"}


id: PBO:0084814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant show severe fragmentation of mitochondria; expression is strongly induced by alpha factor; may have role in maintenance of mitochondrial morphology","termid":"PBO:0084814"}


id: PBO:0072621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 6 homolog A","termid":"PBO:0072621"}


id: MONDO:0014362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chromosome inversion disorder","termid":"MONDO:0043678"},{"relation_name":"is_a","term_name":"chromosome 16 disorder","termid":"MONDO:0700023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 inversion, 0.45-Mb","secondary_identifiers":["OMIM:615835","UMLS:C4014436","MEDGEN:862873"],"synonyms":[{"name":"chromosome 16 inversion, 0.45-Mb","type":"exact"}],"termid":"MONDO:0014362","xrefs":{"Monarch":{"xref_id":"0014362"}}}


id: PBO:0027862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_replication_during_cellular_response_to_DNA_damage","termid":"PBO:0027862"}


id: MONDO:0021054
data:
  {"annotated_genes":["SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A sarcoma that arises from the bone. Representative examples are osteosarcoma and chondrosarcoma.","definition_xrefs":["NCIT:C9312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone sarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20547","MEDGEN:352831","Orphanet:223727","MedDRA:10006007","SCTID:448710000","ICD9:170.9","DOID:0080639","UMLS:C1704327"],"synonyms":[{"name":"bone sarcoma","type":"exact"},{"name":"osseous sarcoma","type":"exact"},{"name":"sarcoma of bone","type":"exact"},{"name":"sarcoma of the bone","type":"exact"},{"name":"skeletal sarcoma","type":"exact"}],"termid":"MONDO:0021054","terms_by_termid":{"MONDO:0002629":null},"xrefs":{"Monarch":{"xref_id":"0021054"}}}


id: SO:0005857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a selenocysteine anticodon, and a 3' selenocysteine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"selenocysteine_tRNA_primary_transcript","termid":"SO:0005856"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteinyl_tRNA","synonyms":[{"name":"selenocysteinyl tRNA","type":"exact"},{"name":"selenocysteinyl-transfer RNA","type":"exact"},{"name":"selenocysteinyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0005857"}


id: GO:0014825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the fundus of stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The fundus is the portion of the stomach that lies above the cardiac notch.","definition_xrefs":["GOC:mtg_muscle","MA:0001612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal stomach smooth muscle contraction","termid":"GO:0014847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}


id: MONDO:0023054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Klumpke paralysis is a type of brachial palsy in newborns. Signs and symptoms include weakness and loss of movement of the arm and hand. Some babies experience drooping of the eyelid on the opposite side of the face as well. This symptom may also be referred to as Horner syndrome. Klumpke paralysis is caused by an injury to the nerves of the brachial plexus which may result from a difficult delivery. This injury can cause a stretching (neuropraxia), tearing (called avulsion when the tear is at the spine, and rupture when it is not), or scarring (neuroma) of the brachial plexus nerves. Most infants with Klumpke paralysis have the more mild form of injury (neuropraxia) and often recover within 6 months.","definition_xrefs":["GARD:0003123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klumpke's paralysis","secondary_identifiers":["GARD:3123","NCIT:C116724","MEDGEN:124376","UMLS:C0270898","SCTID:83886009"],"synonyms":[{"name":"Dejerine Klumpke Palsy","type":"related"},{"name":"Dejerine-Klumpke Palsy","type":"related"},{"name":"Dejerine-Klumpke palsy","type":"related"},{"name":"Klumpke Palsy","type":"related"},{"name":"Klumpke Paralysis","type":"related"},{"name":"Klumpke paralysis","type":"related"},{"name":"Klumpke's Palsy","type":"related"},{"name":"Klumpke's palsy","type":"related"},{"name":"Klumpke's paralysis","type":"related"},{"name":"Klumpke-DC)jerine brachial plexus injury","type":"related"},{"name":"Klumpke-DC)jerine paralysis","type":"related"},{"name":"Klumpke-Dejerine paralysis","type":"related"},{"name":"Klumpkes Palsy","type":"related"},{"name":"Lower Brachial Plexus Palsy","type":"related"},{"name":"Lower brachial plexus palsy","type":"related"},{"name":"Palsy, Dejerine-Klumpke","type":"related"},{"name":"Palsy, Klumpke's","type":"related"},{"name":"Paralysis of the Lower Brachial Plexus","type":"related"},{"name":"Paralysis, Klumpke","type":"related"},{"name":"klumpke paralysis","type":"related"},{"name":"klumpke's palsy","type":"related"},{"name":"klumpke's paralysis","type":"exact"},{"name":"klumpke-dC)jerine brachial plexus injury","type":"related"},{"name":"klumpke-dC)jerine paralysis","type":"exact"},{"name":"klumpke-dejerine paralysis","type":"related"}],"termid":"MONDO:0023054","xrefs":{"Monarch":{"xref_id":"0023054"}}}


id: GO:0072105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A wavelike sequence of involuntary muscular contraction and relaxation that passes along the ureter, impelling the contents onwards. The ureter is one of a pair of thick-walled tubes that transports urine from the kidney pelvis to the urinary bladder.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureter smooth muscle contraction","termid":"GO:0014849"},{"relation_name":"is_a","term_name":"peristalsis","termid":"GO:0030432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric peristalsis","termid":"GO:0072105"}


id: GO:0060589
data:
  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regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"NTPase regulator activity","type":"exact"}],"termid":"GO:0060589","terms_by_termid":{"GO:0005085":null,"GO:0005092":null,"GO:0005093":null,"GO:0005094":null,"GO:0005095":null,"GO:0005096":null,"GO:0030695":null}}


id: PBO:0068360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 141","termid":"PBO:0068360"}


id: PBO:0041454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 67","termid":"PBO:0041454"}


id: PBO:0002986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase (predicted)","termid":"PBO:0002986"}


id: GO:0106431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction N6-methyl-(d)ATP + H2O = N6-methyl-(d)AMP + diphosphate + H+.","definition_xrefs":["PMID:32144205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N6-methyl-(d)ATP hydrolase activity","termid":"GO:0106431"}


id: MONDO:0022200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete treatment for disease (obsolete MONDO:0022200)","termid":"MONDO:0022200","xrefs":{"Monarch":{"xref_id":"0022200"}}}


id: GO:0021830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of interneurons from the subpallium to the cortex during forebrain development.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential interneuron migration","termid":"GO:0021843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"interneuron migration from the subpallium to the cortex","termid":"GO:0021830"}


id: GO:0098864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont organism that stabilizes the its host tight cell-cell junctions, making them less dynamic. The tight junction is a cell-cell junction that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other, and plays a role in the inflammatory response of the host.","definition_xrefs":["PMID:25838979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host tight cell-cell junction","termid":"GO:0098865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated stabilization of host tight cell-cell junction","synonyms":[{"name":"modification by symbiont of host tight cell-cell junction","type":"broad"},{"name":"stabilization of host tight cell-cell junction","type":"broad"}],"termid":"GO:0098864"}


id: PBO:0035905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0035905"}


id: MONDO:1012453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"selective ADP deficiency, non-human animal","termid":"MONDO:1011703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selective ADP deficiency, dog","secondary_identifiers":["OMIA:001792-9615"],"termid":"MONDO:1012453","xrefs":{"Monarch":{"xref_id":"1012453"}}}


id: MONDO:0032744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 37","secondary_identifiers":["GARD:18408","MEDGEN:1677534","OMIM:618429","DOID:0111927","UMLS:C5193091"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 37","type":"related"},{"name":"SPGF37","type":"related"}],"termid":"MONDO:0032744","xrefs":{"Monarch":{"xref_id":"0032744"}}}


id: PBO:0073915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 5","termid":"PBO:0073915"}


id: PBO:0051351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-1 (pseudogene)","termid":"PBO:0051351"}


id: GO:1903162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any serine transmembrane transporter activity that is involved in serine import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GO_REF:0000061","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity involved in serine import into cell (obsolete GO:1903162)","synonyms":[{"name":"serine transmembrane transporter activity involved in serine import into cell","type":"exact"}],"termid":"GO:1903162"}


id: MONDO:0957787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fliedner-Zweier syndrome","secondary_identifiers":["OMIM:620511","MEDGEN:1845438","UMLS:C5882693"],"termid":"MONDO:0957787","xrefs":{"Monarch":{"xref_id":"0957787"}}}


id: GO:0001887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving compounds that contain selenium, such as selenocysteine.","definition_xrefs":["PMID:12730456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selenium compound metabolic process","secondary_identifiers":["Reactome:R-HSA-2408508","Reactome:R-HSA-2408550","Reactome:R-HSA-2408499","Reactome:R-HSA-2408552","Reactome:R-HSA-5263617"],"synonyms":[{"name":"selenium compound metabolism","type":"exact"},{"name":"selenium metabolic process","type":"exact"},{"name":"selenium metabolism","type":"exact"}],"termid":"GO:0001887"}


id: MONDO:0035369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MTHFS-related developmental delay-microcephaly-short stature-epilepsy syndrome (obsolete MONDO:0035369)","termid":"MONDO:0035369","xrefs":{"Monarch":{"xref_id":"0035369"}}}


id: MONDO:0001703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The absence of or defect in the perception of colors.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"blindness (disorder)","termid":"MONDO:0001941"},{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color vision disorder","secondary_identifiers":["ICD9:368.5","SCTID:193683001","UMLS:C5681659","DOID:13399","MEDGEN:1826147","Orphanet:98658","ICD9:368.59","NCIT:C3891","ICD10CM:H53.5"],"synonyms":[{"name":"blindness color","type":"exact"},{"name":"blindness colour","type":"exact"},{"name":"color blindness","type":"exact"},{"name":"color vision defects","type":"exact"},{"name":"color vision deficiency","type":"exact"},{"name":"color-vision disease","type":"exact"},{"name":"colour blindness","type":"exact"},{"name":"colour vision defects","type":"exact"},{"name":"colour vision deficiency","type":"exact"}],"termid":"MONDO:0001703","xrefs":{"Monarch":{"xref_id":"0001703"}}}


id: MONDO:0003657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methotrexate-associated lymphoproliferation (obsolete MONDO:0003657)","termid":"MONDO:0003657","xrefs":{"Monarch":{"xref_id":"0003657"}}}


id: PBO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-specific cysteine protease, OTU family, Otu1","termid":"PBO:0001869"}


id: MONDO:0030909
data:
  {"annotated_genes":["SJAG_01448"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87835],"is_not":false,"summary":null,"term":"MONDO:0030909"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01448":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked, syndromic, Houge type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15282","DOID:0080242","MEDGEN:1624740","UMLS:C4538788","OMIM:301008"],"synonyms":[{"name":"MRXSHG","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic, Houge type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, HOUGE type","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Houge type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, HOUGE type","type":"related"},{"name":"mental retardation, X-linked, syndromic, Houge type","type":"related"},{"name":"syndromic X-linked intellectual disability Hough type","type":"related"},{"name":"syndromic X-linked mental retardation Hough type","type":"related"}],"termid":"MONDO:0030909","terms_by_termid":{"MONDO:0030909":null},"xrefs":{"Monarch":{"xref_id":"0030909"}}}


id: MONDO:0004278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive transitional cell carcinoma of the bladder that exhibits spindle cell sarcomatoid features.","definition_xrefs":["NCIT:C39824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcomatoid transitional cell carcinoma","termid":"MONDO:0002837"},{"relation_name":"is_a","term_name":"infiltrating bladder urothelial carcinoma","termid":"MONDO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infiltrating bladder urothelial carcinoma sarcomatoid variant","secondary_identifiers":["DOID:7553","UMLS:C1512743","EFO:1000303","ONCOTREE:SCB","MEDGEN:268929"],"synonyms":[{"name":"infiltrating bladder urothelial carcinoma sarcomatoid variant","type":"exact"},{"name":"infiltrating bladder urothelial carcinoma, sarcomatoid variant with heterologous elements","type":"narrow"},{"name":"infiltrating bladder urothelial carcinoma, sarcomatoid variant without heterologous elements","type":"narrow"},{"name":"sarcomatoid carcinoma of the urinary bladder","type":"broad"}],"termid":"MONDO:0004278","xrefs":{"Monarch":{"xref_id":"0004278"}}}


id: PBO:0078422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-3","termid":"PBO:0078422"}


id: PBO:0051022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 2","termid":"PBO:0051022"}


id: MONDO:0007193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary biliary cholangitis","termid":"MONDO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0019303","MONDO:0004335"],"is_obsolete":false,"name":"primary biliary cholangitis 1","secondary_identifiers":["MEDGEN:1642459","DOID:0070358","UMLS:C4551595","GARD:15043","OMIM:109720"],"synonyms":[{"name":"PBC1","type":"related"},{"name":"Pbc","type":"related"},{"name":"biliary cirrhosis, primary, 1","type":"related"}],"termid":"MONDO:0007193","xrefs":{"Monarch":{"xref_id":"0007193"}}}


id: PBO:0088721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase","termid":"PBO:0088721"}


id: FYPO:0004780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to plasma membrane during vegetative growth","termid":"FYPO:0008198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"decreased protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization in plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to plasma membrane, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0004780"}


id: PBO:0083890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) cytoplasmic filaments; contributes directly to nucleocytoplasmic transport and maintenance of the NPC permeability barrier and is involved in gene tethering at the nuclear periphery; interacts with Gle1p; human homolog NUP42 can complement yeast mutant","termid":"PBO:0083890"}


id: PBO:0047447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIc (gene/pseudogene)","termid":"PBO:0047447"}


id: PBO:0089324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Nem1-Spo7 complex) catalytic subunit Nem1","termid":"PBO:0089324"}


id: PBO:0109599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARB2 cotranscriptional regulator A","termid":"PBO:0109599"}


id: GO:0140869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of miRNA-mediated gene silencing activity by base-pairing with a target miRNA. An example of this activity is mediated by long non-coding RNAs (lncRNAs).","definition_xrefs":["PMID:34454184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA binding","termid":"GO:0035198"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0098772","GO:0005488","GO:0140678"],"is_obsolete":false,"name":"miRNA inhibitor activity via base-pairing","synonyms":[{"name":"base-pairing target-directed miRNA suppressor activity","type":"related"},{"name":"base-pairing target-directed microRNA suppressor activity","type":"related"},{"name":"miRNA base-pairing repressor activity","type":"narrow"},{"name":"miRNA binding involved in posttranscriptional gene silencing","type":"exact"},{"name":"miRNA inhibitor activity","type":"broad"},{"name":"miRNA sponge","type":"narrow"}],"termid":"GO:0140869"}


id: PBO:0113501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trimeric heat shock transcription factor; forms condensate with Mediator and RNA Pol II upon heat shock; activates multiple genes in response to diverse stresses and transient intracellular acidification; recognizes variable heat shock elements (HSEs) consisting of inverted NGAAN repeats; monitors translational status through RQC (Ribosomal Quality Control)-mediated translation-stress signal; human homolog HSF1 with linker region mutations can complement yeast hsf1 mutant","termid":"PBO:0113501"}


id: MONDO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The inability to generate oral-verbal expression, despite normal comprehension of speech. This may be associated with brain diseases or mental disorders. Organic mutism may be associated with damage to the frontal lobe; brain stem; thalamus; and cerebellum. Selective mutism is a psychological condition that usually affects children characterized by continuous refusal to speak in social situations by a child who is able and willing to speak to selected persons. Kussmal aphasia refers to mutism in psychosis.","definition_xrefs":["MESH:D009155","PMID:7959517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"speech disorder","termid":"MONDO:0004730"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutism","secondary_identifiers":["MEDGEN:6476","DOID:4189","icd11.foundation:1275861519","HP:0002300","UMLS:C0026884"],"synonyms":[{"name":"mutism","type":"exact"},{"name":"mutism (disease)","type":"exact"}],"termid":"MONDO:0002905","xrefs":{"Monarch":{"xref_id":"0002905"}}}


id: PBO:0044711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10 pseudogene 2","termid":"PBO:0044711"}


id: PBO:0084200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone variant H2AZ; exchanged for histone H2A in nucleosomes by the SWR1 complex; involved in transcriptional regulation through prevention of the spread of silent heterochromatin; Htz1p-containing nucleosomes facilitate RNA Pol II passage by affecting correct assembly and modification status of RNA Pol II elongation complexes and by favoring efficient nucleosome remodeling","termid":"PBO:0084200"}


id: PBO:0040660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 5","termid":"PBO:0040660"}


id: GO:0003692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"left-handed Z-DNA binding","termid":"GO:0003692"}


id: FYPO:0007890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal during mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during vegetative growth","termid":"FYPO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic spindle assembly checkpoint signaling","termid":"FYPO:0007890"}


id: MONDO:0019073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis-lymphedema-telangiectasia syndrome (grouping)","termid":"MONDO:0007670"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypotrichosis-lymphedema-telangiectasia-renal defect syndrome","secondary_identifiers":["MESH:C536825","UMLS:C4317151","OMIM:137940","DOID:0111360","GARD:2492","MEDGEN:1373459"],"synonyms":[{"name":"HLTRS","type":"related"},{"name":"glomerulonephritis with sparse hair and telangiectases","type":"related"},{"name":"hypotrichosis-lymphedema-telangiectasia-membranoproliferative glomerulonephritis syndrome","type":"exact"},{"name":"hypotrichosis-lymphedema-telangiectasia-renal defect syndrome","type":"exact"},{"name":"telangiectatic membranoproliferative glomerulonephritis","type":"related"}],"termid":"MONDO:0019073","xrefs":{"Monarch":{"xref_id":"0019073"}}}


id: GO:0021535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that will reside in the hindbrain.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration in hindbrain","termid":"GO:0021535"}


id: PBO:0043588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 2","termid":"PBO:0043588"}


id: PBO:0074626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 22C","termid":"PBO:0074626"}


id: FYPO:0006540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin cytoskeleton organization is abnormal during a cellular response to pheromone.","definition_xrefs":["GO:0030036","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cytoskeleton organization during cellular response to pheromone","synonyms":[{"name":"abnormal actin cytoskeleton organisation during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0006540"}


id: GO:0045985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pyrimidine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleobase metabolic process","termid":"GO:0006142"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of pyrimidine nucleobase metabolic process","synonyms":[{"name":"activation of pyrimidine base metabolic process","type":"narrow"},{"name":"positive regulation of pyrimidine base metabolic process","type":"exact"},{"name":"positive regulation of pyrimidine base metabolism","type":"exact"},{"name":"stimulation of pyrimidine base metabolic process","type":"narrow"},{"name":"up regulation of pyrimidine base metabolic process","type":"exact"},{"name":"up-regulation of pyrimidine base metabolic process","type":"exact"},{"name":"upregulation of pyrimidine base metabolic process","type":"exact"}],"termid":"GO:0045985"}


id: PBO:0077581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMLHE pseudogene 1","termid":"PBO:0077581"}


id: GO:0043666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein.","definition_xrefs":["GOC:jp","PMID:11724821"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphoprotein phosphatase activity (obsolete GO:0043666)","synonyms":[{"name":"regulation of calcineurin activity","type":"narrow"},{"name":"regulation of protein phosphatase 3 activity","type":"related"},{"name":"regulation of protein phosphatase type 2 activity","type":"related"},{"name":"regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"regulation of protein phosphatase type 2B activity","type":"narrow"}],"termid":"GO:0043666"}


id: PBO:0056900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIER family member 2","termid":"PBO:0056900"}


id: MONDO:0011351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the TECTA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 21","secondary_identifiers":["DOID:0110479","GARD:22595","MEDGEN:355030","MESH:C566353","OMIM:603629","UMLS:C1863655"],"synonyms":[{"name":"DFNB21","type":"narrow"},{"name":"TECTA autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 21","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 21","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in TECTA","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in tecta","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 21","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 21","type":"exact"},{"name":"deafness, autosomal recessive 21","type":"narrow"},{"name":"deafness, autosomal recessive type 21","type":"narrow"},{"name":"tecta autosomal recessive nonsyndromic deafness","type":"narrow"}],"termid":"MONDO:0011351","xrefs":{"Monarch":{"xref_id":"0011351"}}}


id: FYPO:0005387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of eukaryotic translation initiation factor 2B complex assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased eukaryotic translation initiation factor 2B complex assembly","synonyms":[{"name":"decreased eIF-2B assembly","type":"exact"},{"name":"decreased eIF-2B formation","type":"exact"},{"name":"decreased eif2B assembly","type":"exact"},{"name":"decreased eukaryotic translation initiation factor 2B complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased eukaryotic translation initiation factor 2B complex assembly during vegetative growth","type":"exact"},{"name":"reduced eukaryotic translation initiation factor 2B complex assembly","type":"exact"}],"termid":"FYPO:0005387"}


id: MONDO:0008474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal domiant spondyloepiphyseal dysplasia tarda (autosomal dominant SEDT) is an inherited condition that affects bone growth. Signs and symptoms are generally physically apparent by puberty; however, abnormalities may be seen on X-ray at an earlier age. Affected people may have skeletal abnormalities, short stature (with a short neck and trunk, specifically), scoliosis, kyphosis, lumbar hyperlordosis (exaggerated curvature of the lower back), and early-onset progressive osteoarthritis of the hips and knees. Some cases of autosomal dominant SEDT may be caused by changes (mutations) in the COL2A1 gene. As the name suggests, the condition is inherited in an autosomal dominant manner. Treatment is based on the signs and symptoms present in each person and may include surgery and pain management strategies.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia with congenital joint dislocations","termid":"MONDO:0007738"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia tarda","termid":"MONDO:0019667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia tarda, autosomal dominant","secondary_identifiers":["GARD:10624","MESH:C566658","MEDGEN:355785","DOID:0112285","OMIM:184100","UMLS:C1866717"],"synonyms":[{"name":"autosomal dominant spondyloepiphyseal dysplasia tarda","type":"exact"},{"name":"spondyloepiphyseal dysplasia tarda, autosomal dominant","type":"exact"}],"termid":"MONDO:0008474","xrefs":{"Monarch":{"xref_id":"0008474"}}}


id: PR:Q10429
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04699","PANTHER:PTHR14418:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.03","secondary_identifiers":["UniProtKB:Q10429"],"synonyms":[{"name":"CAPG homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NCAPG","type":"exact"},{"name":"p100 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q10429"}


id: GO:0014730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage at the neuromuscular junction. Regeneration of neuromuscular junctions occurs in an orderly way and relies on communication between nerve and muscle. Skeletal myofibers regenerate after injury and form neuro-muscular junctions with motor axons similar to normal ones. Regenerating myofibers develop within the basal lamina sheaths (satellite cells) of original myofibers.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle regeneration at neuromuscular junction","termid":"GO:0014730"}


id: MONDO:1010786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary generalized severe hyperkeratosis with a formation of a strongly wrinkled, thickened and scaling skin in dogs due to a variation in the SLC27A4 gene.","definition_xrefs":["PMID:26506231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis SLC27A4-related, dog","secondary_identifiers":["OMIA:001973-9615"],"termid":"MONDO:1010786","xrefs":{"Monarch":{"xref_id":"1010786"}}}


id: MONDO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotonia-speech impairment-severe cognitive delay syndrome (obsolete MONDO:0018297)","termid":"MONDO:0018297","xrefs":{"Monarch":{"xref_id":"0018297"}}}


id: PBO:0050409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D","termid":"PBO:0050409"}


id: GO:0032005
data:
  {"annotated_genes":["SJAG_02923","SJAG_01345","SJAG_01718","SJAG_02379","SJAG_03340","SJAG_00990","SJAG_03623","SJAG_01978","SJAG_03453","SJAG_00781","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92798,108348,113359,117590],"is_not":false,"summary":null,"term":"GO:0032005"},{"annotations":[95269],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[95270,66005,91180,98992,98335,108245],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[72600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"}]},"cv_name":"biological_process","definition":"The series of molecular signals that bring about the relay, amplification or dampening of a signal generated in response to a cue, such as starvation or pheromone exposure, in organisms that undergo conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00781":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02379":null,"SJAG_02923":null,"SJAG_03340":null,"SJAG_03453":null,"SJAG_03623":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000747","GO:0023052"],"is_obsolete":false,"name":"signal transduction involved in positive regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0032005","terms_by_termid":{"GO:0000750":null,"GO:0032005":null,"GO:0071507":null,"GO:0090029":null}}


id: GO:1901856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular respiration.","definition_xrefs":["GOC:yaf","PMID:23150719","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"negatively_regulates","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular respiration","synonyms":[{"name":"down regulation of cellular respiration","type":"exact"},{"name":"down regulation of oxidative metabolic process","type":"exact"},{"name":"down regulation of oxidative metabolism","type":"exact"},{"name":"down regulation of respiration","type":"broad"},{"name":"down-regulation of cellular respiration","type":"exact"},{"name":"down-regulation of oxidative metabolic process","type":"exact"},{"name":"down-regulation of oxidative metabolism","type":"exact"},{"name":"down-regulation of respiration","type":"broad"},{"name":"downregulation of cellular respiration","type":"exact"},{"name":"downregulation of oxidative metabolic process","type":"exact"},{"name":"downregulation of oxidative metabolism","type":"exact"},{"name":"downregulation of respiration","type":"broad"},{"name":"inhibition of cellular respiration","type":"narrow"},{"name":"inhibition of oxidative metabolic process","type":"exact"},{"name":"inhibition of oxidative metabolism","type":"exact"},{"name":"inhibition of respiration","type":"broad"},{"name":"negative regulation of oxidative metabolic process","type":"exact"},{"name":"negative regulation of oxidative metabolism","type":"exact"},{"name":"negative regulation of respiration","type":"broad"}],"termid":"GO:1901856"}


id: GO:0009688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"apocarotenoid biosynthetic process","termid":"GO:0043289"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"abscisic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-695"],"synonyms":[{"name":"abscisic acid anabolism","type":"exact"},{"name":"abscisic acid biosynthesis","type":"exact"},{"name":"abscisic acid formation","type":"exact"},{"name":"abscisic acid synthesis","type":"exact"}],"termid":"GO:0009688"}


id: GO:1903549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of growth hormone activity.","definition_xrefs":["PMID:3068266","GOC:TermGenie","GO_REF:0000059","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth hormone activity (obsolete GO:1903549)","synonyms":[{"name":"activation of GH activity","type":"narrow"},{"name":"activation of growth hormone activity","type":"narrow"},{"name":"activation of pituitary growth hormone activity","type":"narrow"},{"name":"activation of placental growth hormone activity","type":"narrow"},{"name":"positive regulation of GH activity","type":"exact"},{"name":"positive regulation of pituitary growth hormone activity","type":"narrow"},{"name":"positive regulation of placental growth hormone activity","type":"narrow"},{"name":"up regulation of GH activity","type":"exact"},{"name":"up regulation of growth hormone activity","type":"exact"},{"name":"up regulation of pituitary growth hormone activity","type":"narrow"},{"name":"up regulation of placental growth hormone activity","type":"narrow"},{"name":"up-regulation of GH activity","type":"exact"},{"name":"up-regulation of growth hormone activity","type":"exact"},{"name":"up-regulation of pituitary growth hormone activity","type":"narrow"},{"name":"up-regulation of placental growth hormone activity","type":"narrow"},{"name":"upregulation of GH activity","type":"exact"},{"name":"upregulation of growth hormone activity","type":"exact"},{"name":"upregulation of pituitary growth hormone activity","type":"narrow"},{"name":"upregulation of placental growth hormone activity","type":"narrow"}],"termid":"GO:1903549"}


id: MONDO:0019092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infantile apnea is a cessation of respiratory air flow that may affect newborns or older children because of neurological impairment of the respiratory rhythm or obstruction of air flow through the air passages. The symptoms include cyanosis, pallor or bradycardia and snoring in case of obstructive apnea.","definition_xrefs":["Orphanet:70590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile apnea","secondary_identifiers":["SCTID:724229002","MEDGEN:1378556","GARD:6779","UMLS:C0745261"],"synonyms":[{"name":"apnea of infancy","type":"exact"}],"termid":"MONDO:0019092","xrefs":{"Monarch":{"xref_id":"0019092"}}}


id: PBO:0058832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8062","termid":"PBO:0058832"}


id: GO:0003049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intrinsic circulatory process resulting from capillary fluid shift that modulates the force with which blood travels through the systemic arterial circulatory system. Capillary fluid shift is the movement of fluid across the capillary membrane between the blood and the interstitial fluid compartment.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by physical factors","termid":"GO:0003045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by capillary fluid shift","synonyms":[{"name":"blood pressure regulation by capillary fluid shift","type":"exact"}],"termid":"GO:0003049"}


id: PBO:0039847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 15","termid":"PBO:0039847"}


id: PBO:0081102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger E-box binding homeobox 2","termid":"PBO:0081102"}


id: PBO:0060196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 17, cell surface associated","termid":"PBO:0060196"}


id: FYPO:0003420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is higher than normal during a cellular response to cadmium.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular glutathione level during vegetative growth","termid":"FYPO:0001521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular glutathione level during cellular response to cadmium ion","synonyms":[{"name":"increased cellular GSH level during cellular response to cadmium","type":"exact"},{"name":"increased cellular L-gamma-glutamyl-L-cysteinylglycine level during cellular response to cadmium","type":"exact"},{"name":"increased cellular glutathione level during cellular response to cadmium","type":"exact"},{"name":"increased cellular glutathione level during cellular response to cadmium during mitotic cell cycle","type":"related"},{"name":"increased cellular glutathione level during cellular response to cadmium during vegetative growth","type":"exact"},{"name":"increased cellular reduced glutathione level during cellular response to cadmium","type":"exact"},{"name":"increased glutathione accumulation during cellular response to cadmium","type":"related"}],"termid":"FYPO:0003420"}


id: SO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A maxicircle is a replicon, part of a kinetoplast, that contains open reading frames and replicates via a rolling circle method.","definition_xrefs":["PMID:8395055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxicircle","secondary_identifiers":["SO:0000827"],"synonyms":[{"name":"maxicircle_chromosome","type":"exact"}],"termid":"SO:0000742"}


id: PBO:0086015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to the vacuole; member of the seripauperin multigene family encoded mainly in subtelomeric regions","termid":"PBO:0086015"}


id: GO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the surface configuration of an embryonic cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic cell shape","synonyms":[{"name":"shape changes of embryonic cells","type":"related"}],"termid":"GO:0016476"}


id: RO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) postively regulates process(P2) iff: P1 initiates P2, or P1 increases the the frequency of initiation of P2 or the magnitude or rate of output of P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"causally_upstream_of,_positive_effect","termid":"RO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulates","termid":"RO:0002213"}


id: RO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relation_between_structure_and_stage","termid":"RO:0002487"}


id: GO:0042915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of group A colicins (colicins E1, E2, E3, A, K, and N) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:9171417","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colicin transport","termid":"GO:0042914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"group A colicin transport","termid":"GO:0042915"}


id: PBO:0081601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 525","termid":"PBO:0081601"}


id: PBO:0034134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_paraxenology_relationship_with","termid":"PBO:0034134"}


id: GO:0033941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D- and (1->6)-alpha-D- linkages in mannan, releasing D-mannose.","definition_xrefs":["EC:3.2.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mannan exo-1,2-1,6-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.137-RXN"],"synonyms":[{"name":"1,2-1,6-alpha-D-mannan D-mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,6-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033941"}


id: PBO:0057270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 494","termid":"PBO:0057270"}


id: PBO:0043376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 6","termid":"PBO:0043376"}


id: PBO:0120799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP7 ribonuclease P/MRP subunit","termid":"PBO:0120799"}


id: PATO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000142 substance (obsolete PATO:0000142)","termid":"PATO:0000142"}


id: GO:1900576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gerfelin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"gerfelin metabolic process","synonyms":[{"name":"gerfelin metabolism","type":"exact"}],"termid":"GO:1900576"}


id: PBO:0113268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid binding protein; interacts with mitochondria and with Myo2p, functioning as an adaptor that recruits Myo2p and facilitates actin-based transport of mitochondria to the bud; mediates mitochondria anchorage at the bud tip; phosphorylated protein that localizes to the mitochondrial outer membrane; mRNA is targeted to the bud via the transport system involving She2p; member of the DSL1 family of tethering proteins","termid":"PBO:0113268"}


id: PBO:0067405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 515, pseudogene","termid":"PBO:0067405"}


id: PR:O60082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1494.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1494.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.08c","synonyms":[{"name":"Spom972h-SPCC1494.08c","type":"exact"}],"termid":"PR:O60082"}


id: PBO:0063562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline, glutamate and leucine rich protein 1","termid":"PBO:0063562"}


id: GO:0008127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + O2 + quercetin = 2-(3,4-dihydroxybenzoyloxy)-4,6-dihydroxybenzoate + CO.","definition_xrefs":["RHEA:15381","EC:1.13.11.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"quercetin 2,3-dioxygenase activity","secondary_identifiers":["MetaCyc:QUERCETIN-23-DIOXYGENASE-RXN","KEGG_REACTION:R02156","UM-BBD_reactionID:r0891","Reactome:R-HSA-8953398"],"synonyms":[{"name":"flavonol 2,4-oxygenase activity","type":"related"},{"name":"quercetin:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"quercetinase activity","type":"related"}],"termid":"GO:0008127"}


id: MONDO:0022907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous sclerosis","termid":"MONDO:0022907","xrefs":{"Monarch":{"xref_id":"0022907"}}}


id: PBO:0073369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 2","termid":"PBO:0073369"}


id: MONDO:1012738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary chondrodysplaisa that occurs in dogs characterized by short limbs and radius curvus deformity.","definition_xrefs":["PMID:20018534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, dog","termid":"MONDO:1011194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary chondrodysplasia, dog","secondary_identifiers":["OMIA:001790-9615"],"synonyms":[{"name":"Chondrodysplasia, Labrador retriever dog","type":"narrow"}],"termid":"MONDO:1012738","xrefs":{"Monarch":{"xref_id":"1012738"}}}


id: FYPO:0005066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at centromere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at centromeric region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0005066"}


id: PBO:0041481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 87","termid":"PBO:0041481"}


id: MONDO:0958348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare closed dysraphism with terminal stalk characterized by persistent rudimentary spinal cord below conus. It contains non-functional neural tissue and is typically isolated. The diagnostic is suggested by attenuated conus without fat, further confirmed by pathological analysis (glioneuronal core with ependyma-lined lumen, nerve roots, and dorsal root ganglia). Differential diagnostic with intraoperative neurophysiological monitoring is mandatory as neuroimaging fails to distinguish it from functional conus.","definition_xrefs":["Orphanet:645334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphism with stalk","termid":"MONDO:0958259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"retained medullary cord","secondary_identifiers":["UMLS:C5816811","MEDGEN:1853139"],"termid":"MONDO:0958348","xrefs":{"Monarch":{"xref_id":"0958348"}}}


id: GO:1902265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of abscisic acid within an organism or cell.","definition_xrefs":["GOC:TermGenie","PMID:23252460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abscisic acid homeostasis","synonyms":[{"name":"2-cis-abscisate homeostasis","type":"related"},{"name":"ABA homeostasis","type":"related"}],"termid":"GO:1902265"}


id: FYPO:0009075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing fructose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0005447","FYPO:0002060","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth on fructose carbon source","synonyms":[{"name":"decreased growth on fructose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on fructose carbon source","type":"exact"},{"name":"reduced cell growth on fructose carbon source","type":"related"},{"name":"slow cell growth on fructose carbon source","type":"narrow"}],"termid":"FYPO:0009075"}


id: GO:0002698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune effector process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"negatively_regulates","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune effector process","synonyms":[{"name":"down regulation of immune effector process","type":"exact"},{"name":"down-regulation of immune effector process","type":"exact"},{"name":"downregulation of immune effector process","type":"exact"},{"name":"inhibition of immune effector process","type":"narrow"}],"termid":"GO:0002698"}


id: PBO:0065290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 4","termid":"PBO:0065290"}


id: PBO:0075951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3L5P-PVRIG2P-PILRB readthrough","termid":"PBO:0075951"}


id: GO:0018805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarate + toluene = 2-benzylsuccinate.","definition_xrefs":["EC:4.1.99.11","RHEA:10416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"benzylsuccinate synthase activity","secondary_identifiers":["MetaCyc:RXN-863","UM-BBD_enzymeID:r0328","KEGG_REACTION:R05598"],"synonyms":[{"name":"benzylsuccinate fumarate-lyase (toluene-forming)","type":"related"},{"name":"benzylsuccinate fumarate-lyase activity","type":"related"}],"termid":"GO:0018805"}


id: PBO:0063702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 1","termid":"PBO:0063702"}


id: PBO:0091516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi1","termid":"PBO:0091516"}


id: PBO:0042866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP97 domain containing 1","termid":"PBO:0042866"}


id: GO:0072750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptomycin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to leptomycin B","termid":"GO:1901344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leptomycin B","termid":"GO:0072750"}


id: PBO:0114850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase senataxin-like Dbl8","termid":"PBO:0114850"}


id: GO:0005220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when inositol 1,4,5-trisphosphate (IP3) has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:signaling","PMID:28416699","Wikipedia:Inositol_trisphosphate_receptor","GOC:mah","PMID:8660280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate-gated calcium channel activity","secondary_identifiers":["GO:0008095"],"synonyms":[{"name":"IP3 receptor activity","type":"exact"},{"name":"InsP3 receptor","type":"exact"},{"name":"inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","type":"exact"},{"name":"inositol-1,4,5-trisphosphate receptor activity","type":"exact"}],"termid":"GO:0005220"}


id: PBO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase Agl1","termid":"PBO:0001816"}


id: GO:0052358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont glucan (obsolete GO:0052358)","termid":"GO:0052358"}


id: GO:0160223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized membranous structure that extends from the photosynthetic thylakoid membrane into and transverses the matrix of a pyrenoid.","definition_xrefs":["PMID:32428480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pyrenoid","termid":"GO:1990732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pyrenoid tubule","synonyms":[{"name":"thylakoid membrane tubule","type":"exact"}],"termid":"GO:0160223"}


id: GO:0033010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. It flanks the node of Ranvier in myelinated nerve and electrically isolates the myelinated from unmyelinated nerve segments and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.","definition_xrefs":["PMID:14630217","PMID:11395001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"paranodal junction","synonyms":[{"name":"axoglial septate junction","type":"exact"},{"name":"paranodal axoglial junction","type":"exact"},{"name":"paranodal septate junction","type":"exact"}],"termid":"GO:0033010"}


id: PBO:0040737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 3","termid":"PBO:0040737"}


id: GO:1903138
data:
  {"annotated_genes":["SJAG_01114","SJAG_04825","SJAG_03263","SJAG_05000","SJAG_04522","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97800,101389,105753,109015,109583,120336],"is_not":false,"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cell integrity MAPK cascade.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of stress-activated MAPK cascade","termid":"GO:0032873"},{"relation_name":"is_a","term_name":"regulation of cell integrity MAPK cascade","termid":"GO:1903137"},{"relation_name":"negatively_regulates","term_name":"cell integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inhibition of Mpk1 cascade","type":"narrow"},{"name":"inhibition of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"inhibition of cell wall biogenesis, MAPKKK cascade","type":"narrow"},{"name":"negative regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"negative regulation of Mpk1 cascade","type":"narrow"},{"name":"negative regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"negative regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"negative regulation of cell integrity MAPK pathway","type":"exact"},{"name":"negative regulation of cell wall integrity MAPK cascade","type":"narrow"}],"termid":"GO:1903138","terms_by_termid":{"GO:1903138":null}}


id: MOD:00825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-cysteine residue by a thioester bond to form S-(L-phenylalaninyl)-L-cysteine.","definition_xrefs":["RESID:AA0414","PubMed:12591958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-phenylalanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl cysteine thioester (Cys-Phe)","type":"exact"},{"name":"S-(2-amino-3-phenylpropanoyl)cysteine","type":"exact"},{"name":"S-(L-phenylalanyl)-L-cysteine","type":"exact"},{"name":"XLNK1PheSCys","type":"exact"},{"name":"phenylalanine cysteine thioester","type":"exact"}],"termid":"MOD:00825"}


id: PR:O42957
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ulp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like-specific protease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.09","synonyms":[{"name":"Spom972h-ulp1","type":"exact"}],"termid":"PR:O42957"}


id: MONDO:0011462
data:
  {"annotated_genes":["SJAG_04077","SJAG_03596"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87042,87043],"is_not":false,"summary":null,"term":"MONDO:0011462"}]},"cv_name":"mondo","definition":"A rare pleiotropic autoinflammatory disorder of childhood, primarily affecting the joints and skin.","definition_xrefs":["Orphanet:69126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03596":null,"SJAG_04077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pyogenic arthritis-pyoderma gangrenosum-acne syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C119055","MESH:C536253","GARD:9176","NANDO:2200437","NANDO:1200868","UMLS:C1858361","MEDGEN:346801","OMIM:604416","DOID:0080519","SCTID:724015007"],"synonyms":[{"name":"FRA","type":"exact"},{"name":"PAPA","type":"exact"},{"name":"Papas","type":"related"},{"name":"familial recurrent arthritis","type":"exact"},{"name":"fra","type":"exact"},{"name":"papa","type":"exact"},{"name":"papa syndrome","type":"exact"},{"name":"pyogenic STERILE arthritis, pyoderma gangrenosum, and acne","type":"related"},{"name":"pyogenic arthritis, pyoderma gangrenosum and acne","type":"related"},{"name":"pyogenic arthritis, pyoderma gangrenosum, and severe cystic acne","type":"related"}],"termid":"MONDO:0011462","terms_by_termid":{"MONDO:0011462":null},"xrefs":{"Monarch":{"xref_id":"0011462"}}}


id: PBO:0119993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal N4","termid":"PBO:0119993"}


id: MONDO:0021221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the vestibulocochlear nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibulocochlear nerve disorder","termid":"MONDO:0001563"},{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibulocochlear nerve neoplasm","secondary_identifiers":["UMLS:C0346330","SCTID:387891008","MEDGEN:91099","NCIT:C5120"],"synonyms":[{"name":"Vestibuloacoustic nerve neoplasms","type":"exact"},{"name":"acoustic nerve neoplasm","type":"exact"},{"name":"acoustic nerve tumor","type":"exact"},{"name":"acoustic nerve tumour","type":"exact"},{"name":"cranial nerve eight neoplasms","type":"exact"},{"name":"eighth cranial nerve neoplasm","type":"exact"},{"name":"eighth cranial nerve neoplasms","type":"exact"},{"name":"eighth cranial nerve tumor","type":"exact"},{"name":"eighth cranial nerve tumour","type":"exact"},{"name":"neoplasm of acoustic nerve","type":"exact"},{"name":"neoplasm of eighth cranial nerve","type":"exact"},{"name":"neoplasm of the acoustic nerve","type":"exact"},{"name":"neoplasm of the eighth cranial nerve","type":"exact"},{"name":"neoplasm of the vestibulocochlear nerve","type":"exact"},{"name":"neoplasm of vestibulocochlear nerve","type":"exact"},{"name":"tumor of acoustic nerve","type":"exact"},{"name":"tumor of eighth cranial nerve","type":"exact"},{"name":"tumor of the acoustic nerve","type":"exact"},{"name":"tumor of the eighth cranial nerve","type":"exact"},{"name":"tumor of the vestibulocochlear nerve","type":"exact"},{"name":"tumor of vestibulocochlear nerve","type":"exact"},{"name":"tumour of acoustic nerve","type":"exact"},{"name":"tumour of eighth cranial nerve","type":"exact"},{"name":"tumour of the acoustic nerve","type":"exact"},{"name":"tumour of the eighth cranial nerve","type":"exact"},{"name":"tumour of the vestibulocochlear nerve","type":"exact"},{"name":"tumour of vestibulocochlear nerve","type":"exact"},{"name":"vestibulocochlear nerve neoplasm (disease)","type":"exact"},{"name":"vestibulocochlear nerve neoplasms","type":"exact"},{"name":"vestibulocochlear nerve tumor","type":"exact"},{"name":"vestibulocochlear nerve tumour","type":"exact"}],"termid":"MONDO:0021221","xrefs":{"Monarch":{"xref_id":"0021221"}}}


id: GO:0042044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances that are in liquid form in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"fluid transport","termid":"GO:0042044"}


id: GO:0009880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the patterns of cell differentiation that will arise in an embryo.","definition_xrefs":["GOC:go_curators","ISBN:0521436125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic pattern specification","synonyms":[{"name":"embryonic pattern biosynthesis","type":"broad"},{"name":"embryonic pattern formation","type":"broad"},{"name":"ventral/lateral system","type":"related"}],"termid":"GO:0009880"}


id: GO:0010701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of norepinephrine secretion","termid":"GO:0014061"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of norepinephrine secretion","termid":"GO:0010701"}


id: GO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process involved in cell fate commitment that occurs after cell fate specification, in which a cell is irreversibly committed to a cellular developmental fate which is heritable on cell division.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination","secondary_identifiers":["Wikipedia:Cell_fate_determination"],"termid":"GO:0001709"}


id: PBO:0036151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_G4_motif_during_vegetative_growth","termid":"PBO:0036151"}


id: MONDO:0007032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prune belly syndrome is a rare congenital disorder, belonging to the group of fetal lower urinary tract obstructions (LUTO), involving variable dilation of the lower urinary tract in association with partial or complete absence of the lateral and inferior abdominal wall musculature and in males bilateral non-palpable undescended testes.","definition_xrefs":["Orphanet:2970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"fetal lower urinary tract obstruction","termid":"MONDO:0018559"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"prune belly syndrome","secondary_identifiers":["NCIT:C85033","DOID:0060889","NORD:1623","MESH:D011535","NANDO:2200185","MESH:C536477","UMLS:C0033770","MedDRA:10051025","icd11.foundation:1393408621","ICD9:756.71","GARD:7479","MEDGEN:18718","SCTID:5187006","ICD10CM:Q79.4","OMIM:100100"],"synonyms":[{"name":"Obrinsky syndrome","type":"exact"},{"name":"Obrisnksy syndrome","type":"exact"},{"name":"PBS","type":"related"},{"name":"abdominal muscle deficiency syndrome","type":"exact"},{"name":"abdominal muscles, absence of, with urinary tract Abnormality and cryptorchidism","type":"related"},{"name":"eagle-Barret syndrome","type":"exact"},{"name":"eagle-Barrett syndrome","type":"related"},{"name":"prune belly syndrome","type":"exact"},{"name":"syndrome of agenesis of abdominal muscles","type":"exact"},{"name":"triad syndrome","type":"exact"}],"termid":"MONDO:0007032","xrefs":{"Monarch":{"xref_id":"0007032"}}}


id: PBO:0049689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart and neural crest derivatives expressed 2","termid":"PBO:0049689"}


id: PBO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body WD repeat protein, human WDR8 family","termid":"PBO:0016555"}


id: PBO:0080025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 11","termid":"PBO:0080025"}


id: PBO:0077348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 88","termid":"PBO:0077348"}


id: GO:2000180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of androgen biosynthetic process.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"negatively_regulates","term_name":"androgen biosynthetic process","termid":"GO:0006702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of androgen biosynthetic process","synonyms":[{"name":"negative regulation of androgen anabolism","type":"exact"},{"name":"negative regulation of androgen biosynthesis","type":"exact"},{"name":"negative regulation of androgen formation","type":"exact"},{"name":"negative regulation of androgen synthesis","type":"exact"}],"termid":"GO:2000180"}


id: FYPO:0004802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to shmoo tip","synonyms":[{"name":"abnormal protein localisation to shmoo tip","type":"exact"},{"name":"abnormal protein localization to mating projection tip","type":"exact"},{"name":"abnormal protein localization to shmoo projection","type":"related"}],"termid":"FYPO:0004802"}


id: PATO:0001959
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's in which bundles of aligned anatomical fibers have become separated.","definition_xrefs":["PATOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciculation","termid":"PATO:0002013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defasciculated","termid":"PATO:0001959"}


id: PBO:0044002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and Sushi multiple domains 2","termid":"PBO:0044002"}


id: PBO:0044780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAF1 transcription factor","termid":"PBO:0044780"}


id: MONDO:0012217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bruck syndrome in which the cause of the disease is a mutation in the PLOD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bruck syndrome","termid":"MONDO:0017195"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Bruck syndrome 2","secondary_identifiers":["MEDGEN:373129","UMLS:C1836602","GARD:10023","OMIM:609220","MESH:C537407"],"synonyms":[{"name":"BRKS2","type":"related"},{"name":"Bruck syndrome 2","type":"exact"},{"name":"Bruck syndrome caused by mutation in PLOD2","type":"exact"},{"name":"Bruck syndrome type 2","type":"exact"},{"name":"PLOD2 Bruck syndrome","type":"exact"},{"name":"osteogenesis imperfecta with congenital Joint contractures","type":"related"}],"termid":"MONDO:0012217","xrefs":{"Monarch":{"xref_id":"0012217"}}}


id: GO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction in which a halogen in the donor substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on halogen in donors (obsolete GO:0052583)","termid":"GO:0052583"}


id: MONDO:0003768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cervical mucinous adenocarcinoma characterized by the presence of signet ring cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical mucinous adenocarcinoma","termid":"MONDO:0002742"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"signet ring cell variant cervical mucinous adenocarcinoma","secondary_identifiers":["ONCOTREE:SCEMU","UMLS:C1516424","MEDGEN:273126","NCIT:C40205","DOID:6101"],"synonyms":[{"name":"cervical mucinous adenocarcinoma, signet Ring cell type","type":"exact"},{"name":"cervical mucinous adenocarcinoma, signet Ring cell variant","type":"exact"},{"name":"signet ring mucinous carcinoma","type":"related"}],"termid":"MONDO:0003768","xrefs":{"Monarch":{"xref_id":"0003768"}}}


id: PBO:0034442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiotic_anaphase_II","termid":"PBO:0034442"}


id: GO:0007583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete killer activity (obsolete GO:0007583)","synonyms":[{"name":"killer activity","type":"exact"}],"termid":"GO:0007583"}


id: PATO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality inhering in a bearer by virtue of the bearer's lack of hairs or bristles.","definition_xrefs":["PATOC:GVG","PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilosity","termid":"PATO:0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glabrous","synonyms":[{"name":"hairless","type":"related"}],"termid":"PATO:0000453"}


id: PBO:0084649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor CTP synthase isozyme (see also URA7); catalyzes the ATP-dependent transfer of the amide nitrogen from glutamine to UTP, forming CTP, the final step in de novo biosynthesis of pyrimidines; involved in phospholipid biosynthesis; capable of forming cytoplasmic filaments termed cytoophidium, especially during conditions of glucose depletion; URA8 has a paralog, URA7, that arose from the whole genome duplication","termid":"PBO:0084649"}


id: PBO:0072175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 2","termid":"PBO:0072175"}


id: PBO:0005576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin efflux transporter Pmd1","termid":"PBO:0005576"}


id: GO:0032002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-28 and interleukin-29. It is composed of an alpha and a beta receptor subunit (in human IFNLR1/IL28Ralpha & IL10RB) and either Interleukin-28 (IFNL2 or IFNL3) or Interleukin-29 (IFNL1).","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"interleukin-28 receptor complex","synonyms":[{"name":"IL-28 receptor complex","type":"exact"}],"termid":"GO:0032002"}


id: MONDO:0020248
data:
  {"annotated_genes":["SJAG_00845","SJAG_02286","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[88371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[89093,89094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous syneresis","termid":"MONDO:0001377"},{"relation_name":"is_a","term_name":"inherited vitreoretinopathy","termid":"MONDO:0020246"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02286":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreoretinal degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5506","SCTID:247182006","HP:0007964","Orphanet:98670","MEDGEN:87480","ICD10CM:H35.5","UMLS:C0344290"],"synonyms":[{"name":"degenerative vitreoretinopathy","type":"exact"}],"termid":"MONDO:0020248","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0020248"}}}


id: PBO:0085616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early pre-mRNA splicing; component of the pre-mRNA-U1 snRNP complex, the commitment complex; interacts with Msl5p/BBP splicing factor and Sub2p; similar to metazoan splicing factor U2AF65","termid":"PBO:0085616"}


id: GO:0008391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the incorporation of one atom from molecular oxygen into arachidonic acid and the reduction of the other atom of oxygen to water.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"arachidonate monooxygenase activity","synonyms":[{"name":"arachidonic acid monooxygenase activity","type":"exact"},{"name":"cytochrome P450 CYP2B19","type":"narrow"}],"termid":"GO:0008391"}


id: PBO:0046742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 1 like","termid":"PBO:0046742"}


id: PBO:0054155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1522","termid":"PBO:0054155"}


id: GO:0072647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-epsilon due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interferon-epsilon production","secondary_identifiers":["GO:0072648"],"synonyms":[{"name":"IFN-epsilon production","type":"exact"},{"name":"IFNE production","type":"exact"},{"name":"interferon-epsilon secretion","type":"narrow"}],"termid":"GO:0072647"}


id: MONDO:0012092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary sensory and autonomic neuropathy, type 5 (HSAN5) is characterized by loss of pain perception and impaired temperature sensitivity, in the absence of any other major neurological anomalies.","definition_xrefs":["Orphanet:64752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 5","secondary_identifiers":["SCTID:128206006","DOID:0070145","GARD:12328","UMLS:C0020075","OMIM:608654","icd11.foundation:1411011731","PMID:77656","PMID:14976160","MEDGEN:6916"],"synonyms":[{"name":"HSAN 5","type":"related"},{"name":"HSAN V","type":"related"},{"name":"HSAN5","type":"exact"},{"name":"NGF autosomal recessive hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"autosomal recessive hereditary sensory and autonomic neuropathy caused by mutation in NGF","type":"exact"},{"name":"congenital insensitivity to pain and thermal analgesia","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type V","type":"exact"},{"name":"insensitivity to pain, congenital","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type 5","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type V","type":"related"}],"termid":"MONDO:0012092","xrefs":{"Monarch":{"xref_id":"0012092"}}}


id: GO:1904818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a visceral peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:15840053","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"peritoneum development","termid":"GO:1904820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visceral peritoneum development","termid":"GO:1904818"}


id: PBO:0028257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ornithine_carbamoyltransferase_activity","termid":"PBO:0028257"}


id: GO:0009873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the reception of ethylene (ethene, C2H4) by a receptor and ending with modulation of a cellular process, e.g. transcription.","definition_xrefs":["GOC:jy","PMID:24012247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"},{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to ethylene stimulus","termid":"GO:0071369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ethylene-activated signaling pathway","synonyms":[{"name":"ethene mediated signaling pathway","type":"related"},{"name":"ethene mediated signalling pathway","type":"exact"},{"name":"ethylene mediated signaling pathway","type":"related"},{"name":"ethylene mediated signalling pathway","type":"related"},{"name":"ethylene signal transduction","type":"related"},{"name":"ethylene signaling pathway","type":"related"}],"termid":"GO:0009873"}


id: FYPO:0005717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal protein kinase activity during mitosis","synonyms":[{"name":"normal protein kinase activity during mitotic M phase","type":"related"},{"name":"normal protein kinase activity during mitotic M-phase","type":"related"}],"termid":"FYPO:0005717"}


id: MONDO:0005390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cardiac arrhythmia (obsolete MONDO:0005390)","termid":"MONDO:0005390","xrefs":{"Monarch":{"xref_id":"0005390"}}}


id: PBO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Ssr3","termid":"PBO:0000640"}


id: PBO:0054578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1980","termid":"PBO:0054578"}


id: PBO:0090411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin (HP1) family chromodomain protein Chp1","termid":"PBO:0090411"}


id: PBO:0070449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 6","termid":"PBO:0070449"}


id: PBO:0116989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAL3ST2 antisense RNA 1","termid":"PBO:0116989"}


id: PBO:0087792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; required for synaptonemal complex formation; localizes to synapsis initiation sites on meiotic chromosomes; associates with centromeres early in meiosis, then with chromosome axes and finally with double-strand break sites that are engaged in repair by crossovers; potential Cdc28p substrate","termid":"PBO:0087792"}


id: GO:0102513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = delphinidin 3,7-di O-beta-D-glucoside + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-glucoside 5-O-glucosyltransferase (vanilloyl-glucose dependent) activity (obsolete GO:0102513)","termid":"GO:0102513"}


id: GO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus during an immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:9185563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin production","termid":"GO:0002377"},{"relation_name":"part_of","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"immunoglobulin production involved in immunoglobulin-mediated immune response","secondary_identifiers":["GO:0002379","GO:0002380"],"synonyms":[{"name":"antibody production during immune response","type":"related"},{"name":"antibody secretion during immune response","type":"related"},{"name":"immunoglobulin biosynthetic process involved in immune response","type":"narrow"},{"name":"immunoglobulin production during immune response","type":"related"},{"name":"immunoglobulin production involved in immune response","type":"related"},{"name":"immunoglobulin production involved in immunoglobulin mediated immune response","type":"exact"},{"name":"immunoglobulin secretion involved in immune response","type":"narrow"}],"termid":"GO:0002381"}


id: GO:0043062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.","definition_xrefs":["GOC:dph","GOC:ai","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular structure organization","synonyms":[{"name":"extracellular structure organisation","type":"exact"},{"name":"extracellular structure organization and biogenesis","type":"exact"}],"termid":"GO:0043062"}


id: GO:0030715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in volume of an oocyte during the growth phase of the egg chamber, once the egg chamber has left the germarium. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte growth","termid":"GO:0001555"},{"relation_name":"part_of","term_name":"growth of a germarium-derived egg chamber","termid":"GO:0007295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte growth in germarium-derived egg chamber","termid":"GO:0030715"}


id: GO:0061142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesothelial cell to an epithelial cell and contributes to the development of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesothelial-mesenchymal cell signaling involved in early lung development","synonyms":[{"name":"mesothelial-mesenchymal cell signalling involved in early lung development","type":"exact"}],"termid":"GO:0061142"}


id: MONDO:8000000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection of the intervertebral disk space.","definition_xrefs":["PMID:27070599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral joint disorder","termid":"MONDO:0037847"},{"relation_name":"is_a","term_name":"infective arthritis","termid":"MONDO:0042485"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious discitis","secondary_identifiers":["EFO:1000900"],"termid":"MONDO:8000000","xrefs":{"Monarch":{"xref_id":"8000000"}}}


id: PBO:0072712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 4 pseudogene 1","termid":"PBO:0072712"}


id: PBO:0055422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2852","termid":"PBO:0055422"}


id: GO:0005291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-histidine from one side of a membrane to the other. L-histidine is 2-amino-3-(1H-imidazol-4-yl)propanoic acid. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-histidine transmembrane transporter activity","termid":"GO:0005290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity L-histidine transmembrane transporter activity","synonyms":[{"name":"high affinity L-histidine transmembrane transporter activity","type":"exact"},{"name":"high affinity histidine permease activity","type":"related"}],"termid":"GO:0005291"}


id: PBO:0042145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 4 like 1","termid":"PBO:0042145"}


id: GO:0035860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a glial cell-derived neurotrophic factor receptor.","definition_xrefs":["PMID:29245123","GOC:yaf","PMID:12953054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"GDNF receptor signaling pathway","type":"exact"},{"name":"glial cell derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"glial cell line-derived neurotrophic factor receptor signalling pathway","type":"exact"},{"name":"glial cell-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0035860"}


id: GO:0071867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monoamine stimulus. A monoamine is any of a group of molecular messengers that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to monoamine","synonyms":[{"name":"response to monoamine stimulus","type":"exact"}],"termid":"GO:0071867"}


id: MONDO:0100491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare and extreme form of psoriasis characterized by the appearance of sterile pustules which can take many patterns. All the main pathological features of the disease are accentuated. Generalized pustular psoriasis is clinically heterogeneous in its age at onset, precipitants, severity, and natural history. Many overlapping clinical entities are recognized. There is a relationship between these entities and plaque psoriasis, as some individuals may have episodes of plaque psoriasis preceding or following the generalized pustular psoriasis, but in others generalized pustular psoriasis occurs as the sole phenotype without plaque psoriasis at any time.","definition_xrefs":["PMID:29630241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pustular psoriasis","termid":"MONDO:0022205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"generalized pustular psoriasis","secondary_identifiers":["Orphanet:247353","UMLS:C0343055","MEDGEN:473074","ICD10CM:L40.1","SCTID:238612002"],"termid":"MONDO:0100491","xrefs":{"Monarch":{"xref_id":"0100491"}}}


id: PR:P36590
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10344:SF0","PRO:DNx","OMA:SCHPO05042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.07c","secondary_identifiers":["UniProtKB:P36590"],"synonyms":[{"name":"Spom972h-DTYMK","type":"exact"},{"name":"dTMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36590"}


id: GO:0140406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-alanine from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:26073055","PMID:31591285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid export across plasma membrane","termid":"GO:0032973"},{"relation_name":"is_a","term_name":"L-alanine transmembrane transport","termid":"GO:1904557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-alanine export across the plasma membrane","termid":"GO:0140406"}


id: MONDO:0002319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic disorder that affects the phosphate homeostasis.","definition_xrefs":["NCIT:C97095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"phosphorus metabolism disease","secondary_identifiers":["UMLS:C0031707","MESH:D010760","DOID:2485","MEDGEN:19276","SCTID:87049008","ICD10CM:E83.3","ICD9:275.3"],"synonyms":[{"name":"disorder of phosphorus metabolism","type":"exact"},{"name":"phosphorus disorder","type":"exact"},{"name":"phosphorus metabolic disorder","type":"exact"},{"name":"phosphorus metabolism disorder","type":"exact"}],"termid":"MONDO:0002319","xrefs":{"Monarch":{"xref_id":"0002319"}}}


id: PBO:0048403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 7","termid":"PBO:0048403"}


id: PR:O94711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp2 gene.","definition_xrefs":["UniProtKB:O94711","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.11c","synonyms":[{"name":"Spom972h-gyp2","type":"exact"}],"termid":"PR:O94711"}


id: PBO:0076249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 polycomb repressive complex 2 subunit","termid":"PBO:0076249"}


id: GO:0080101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidyl-N-dimethylethanolamine = S-adenosyl-L-homocysteine + phosphatidylcholine.","definition_xrefs":["PMID:19366698"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidyl-N-dimethylethanolamine N-methyltransferase activity (obsolete GO:0080101)","termid":"GO:0080101"}


id: GO:0021714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the inferior olivary nucleus is generated and organized. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GO_REF:0000021","GOC:jid","ISBN:0838580343","GOC:dph","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"medulla oblongata morphogenesis","termid":"GO:0021579"},{"relation_name":"part_of","term_name":"inferior olivary nucleus development","termid":"GO:0021713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus morphogenesis","synonyms":[{"name":"inferior olive morphogenesis","type":"related"}],"termid":"GO:0021714"}


id: PBO:0051236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-43-1 (pseudogene)","termid":"PBO:0051236"}


id: PBO:0028318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitochondrial_fission_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028318"}


id: GO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sodium ion transport","synonyms":[{"name":"regulation of Na+ transport","type":"exact"},{"name":"regulation of sodium transport","type":"exact"}],"termid":"GO:0002028"}


id: FYPO:0006799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nuclear MIS12/MIND complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:29180432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear MIS12/MIND complex binding","synonyms":[{"name":"abolished nuclear MIS12/MIND complex binding during mitotic cell cycle","type":"related"},{"name":"abolished nuclear MIS12/MIND complex binding during vegetative growth","type":"exact"},{"name":"nuclear MIS12/MIND complex binding abolished","type":"exact"}],"termid":"FYPO:0006799"}


id: PBO:0035703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0035703"}


id: MONDO:0003022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiosarcoma occurring in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric angiosarcoma","secondary_identifiers":["UMLS:C0279988","DOID:4505","NCIT:C9174","MEDGEN:124687"],"synonyms":[{"name":"angiosarcoma","type":"broad"},{"name":"angiosarcoma (disease) of childhood","type":"exact"},{"name":"childhood angiosarcoma","type":"exact"},{"name":"childhood angiosarcoma (disease)","type":"exact"},{"name":"childhood hemangiosarcoma","type":"exact"},{"name":"paediatric angiosarcoma (disease)","type":"exact"},{"name":"paediatric hemangiosarcoma","type":"exact"},{"name":"pediatric angiosarcoma","type":"exact"},{"name":"pediatric angiosarcoma (disease)","type":"exact"},{"name":"pediatric hemangiosarcoma","type":"exact"}],"termid":"MONDO:0003022","xrefs":{"Monarch":{"xref_id":"0003022"}}}


id: FYPO:0006432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which vesicle-mediated transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal vesicle-mediated transport during vegetative growth","synonyms":[{"name":"normal vesicle-mediated protein transport during vegetative growth","type":"narrow"},{"name":"normal vesicle-mediated transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006432"}


id: GO:0141190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that starts with an opsin molecule being activated by a photon. Opsins include rhodopsin and others visual receptors bind heterotrimeric transducin G proteins upon activation. Activated transducin alpha-subunit activates cGMP phosphodiesterase, which breaks down cGMP. The decrease in cGMP concentration leads to closure of cGMP-gated (CNG) channels, blockage of Na+ influx, and hyperpolarization of photoreceptor plasma membrane, leading to transmission of signal through synapses. The signal is terminated by phosphorylation of the C-terminal tail of rhodopsin by rhodopsin kinase to allow arrestin to bind and block G protein binding. Typical examples are rhabdomeric photoreceptors in the eyes of deuterostomes.","definition_xrefs":["PMID:36272560","PMID:19720651","PMID:36499010","PMID:37159291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"transducin-mediated opsin signaling pathway","synonyms":[{"name":"Gt-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated rhodopsin signaling pathway","type":"narrow"},{"name":"ciliary opsin-mediated signaling pathway","type":"exact"},{"name":"cyclic-GMP-mediated opsin signaling pathway","type":"exact"},{"name":"cyclic-nucleotide-mediated opsin signaling pathway","type":"exact"}],"termid":"GO:0141190"}


id: FYPO:0005199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of a protein kinase activity occurs to a lower extent than normal.","definition_xrefs":["PMID:14739927","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased negative regulation of protein kinase activity","synonyms":[{"name":"decreased inhibition of protein kinase activity","type":"narrow"},{"name":"decreased negative regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"decreased negative regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"reduced negative regulation of protein kinase activity","type":"exact"}],"termid":"FYPO:0005199"}


id: PBO:0069214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 469, pseudogene","termid":"PBO:0069214"}


id: MONDO:0024310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A angiodysplasia that involves the stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiodysplasia","termid":"MONDO:0002322"},{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"angiodysplasia of stomach","secondary_identifiers":["SCTID:424802006","MEDGEN:677051","icd11.foundation:977696596","UMLS:C0744273"],"synonyms":[{"name":"gastric angiodysplasia","type":"related"},{"name":"gastric vascular dysplasia","type":"related"},{"name":"stomach angiodysplasia","type":"exact"}],"termid":"MONDO:0024310","xrefs":{"Monarch":{"xref_id":"0024310"}}}


id: PBO:0061412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal pentraxin receptor","termid":"PBO:0061412"}


id: PATO:0001056
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001056 number (obsolete PATO:0001056)","termid":"PATO:0001056"}


id: PBO:0064497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A","termid":"PBO:0064497"}


id: PBO:0066347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 domain containing 1","termid":"PBO:0066347"}


id: PBO:0058581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715a","termid":"PBO:0058581"}


id: GO:0050368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine = 3-amino-3-(4-hydroxyphenyl)propanoate.","definition_xrefs":["RHEA:15781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-tyrosine 2,3-aminomutase activity","secondary_identifiers":["EC:5.4.3.6","KEGG_REACTION:R00739","MetaCyc:TYROSINE-23-AMINOMUTASE-RXN"],"synonyms":[{"name":"tyrosine 2,3-aminomutase activity","type":"related"},{"name":"tyrosine alpha,beta-mutase activity","type":"related"}],"termid":"GO:0050368"}


id: PBO:0029921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_squalene_level","termid":"PBO:0029921"}


id: FYPO:0000293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any DNA metabolic process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"DNA metabolism phenotype","synonyms":[{"name":"fission yeast DNA metabolism phenotype","type":"exact"}],"termid":"FYPO:0000293"}


id: MONDO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection that develops in the intermediate hosts of some tapeworm species (Taenia multiceps, T. serialis, T. brauni, or T. glomerata) and are caused by the coenurus, the larval stage of these worms. This disease occurs mainly in sheep and other ungulates, but occasionally can occur in humans too by accidental ingestion of worms' eggs.","definition_xrefs":["Wikipedia:Coenurosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taeniasis","termid":"MONDO:0000367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"coenurosis","secondary_identifiers":["icd11.foundation:1545561495","ICD9:123.8","MEDGEN:3142","UMLS:C0009225","SCTID:24360007","DOID:0050251"],"synonyms":[{"name":"caenurosis","type":"exact"},{"name":"coenuriasis","type":"exact"},{"name":"coenurosis","type":"exact"},{"name":"infection by larvae of multiceps","type":"related"},{"name":"infection by tapeworm larva","type":"related"},{"name":"sturdy","type":"related"}],"termid":"MONDO:0000293","xrefs":{"Monarch":{"xref_id":"0000293"}}}


id: SO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gap in the sequence of known length. The unknown bases are filled in with N's.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap","synonyms":[{"name":"INSDC_feature:assembly_gap","type":"narrow"},{"name":"INSDC_feature:gap","type":"exact"}],"termid":"SO:0000730"}


id: PR:O94538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6.U5 tri-snRNP-associated protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00627","PANTHER:PTHR14152:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6.U5 tri-snRNP-associated protein snu66 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.03c","secondary_identifiers":["UniProtKB:O94538"],"synonyms":[{"name":"Spom972h-SART1","type":"exact"}],"termid":"PR:O94538"}


id: MONDO:0014668
data:
  {"annotated_genes":["SJAG_02229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87003],"is_not":false,"summary":null,"term":"MONDO:0014668"}]},"cv_name":"mondo","definition":"Any fatal infantile encephalocardiomyopathy in which the cause of the disease is a mutation in the COA6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal infantile encephalocardiomyopathy","termid":"MONDO:0015487"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0005267","MONDO:0004069"],"is_obsolete":false,"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18573","MEDGEN:905398","OMIM:616501","DOID:0080360","UMLS:C4225304"],"synonyms":[{"name":"CEMCOX4","type":"related"},{"name":"COA6 fatal infantile encephalocardiomyopathy","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome C oxidase deficiency type 4","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 4","type":"exact"},{"name":"fatal infantile encephalocardiomyopathy caused by mutation in COA6","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 13","type":"exact"}],"termid":"MONDO:0014668","terms_by_termid":{"MONDO:0014668":null},"xrefs":{"Monarch":{"xref_id":"0014668"}}}


id: PBO:0081352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 174","termid":"PBO:0081352"}


id: PBO:0075095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 144","termid":"PBO:0075095"}


id: PBO:0026969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_cortical_patches_present_in_decreased_numbers","termid":"PBO:0026969"}


id: PBO:0073677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIRPG antisense RNA 1","termid":"PBO:0073677"}


id: GO:0140727
data:
  {"annotated_genes":["SJAG_03689","SJAG_01008","SJAG_00087","SJAG_04253","SJAG_01540","SJAG_03193","SJAG_03916","SJAG_00414","SJAG_00756","SJAG_02621","SJAG_04574","SJAG_00058","SJAG_03356","SJAG_02594","SJAG_04030","SJAG_02725","SJAG_01601","SJAG_02119","SJAG_03042","SJAG_02409","SJAG_04141","SJAG_04061"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90722,90779,93221,96042,97290,98680,101078,101518,108521,112476,112644,113202,114207,115669,116305,116564,117424,117985,119703,119988,120107,120838],"is_not":false,"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"The formation of pericentric heterochromatin by a process mediated by a small interfering RNA (siRNA).","definition_xrefs":["PMID:15289661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin formation","termid":"GO:0031508"},{"relation_name":"is_a","term_name":"siRNA-mediated heterochromatin formation","termid":"GO:0141194"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00414":null,"SJAG_00756":null,"SJAG_01008":null,"SJAG_01540":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04030":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"siRNA-mediated pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNAi-mediated heterochromatin assembly at centromere","type":"exact"},{"name":"siRNA dependent pericentric heterochromatin assembly","type":"exact"},{"name":"siRNA-dependent pericentric heterochromatin assembly","type":"exact"},{"name":"siRNA-dependent pericentric heterochromatin formation","type":"exact"}],"termid":"GO:0140727","terms_by_termid":{"GO:0140727":null}}


id: MONDO:1010209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphosarcoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"},{"relation_name":"is_a","term_name":"lymphoid system disorder, non-human animal","termid":"MONDO:1011330"},{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphosarcoma, non-human animal","secondary_identifiers":["OMIA:000615"],"termid":"MONDO:1010209","xrefs":{"Monarch":{"xref_id":"1010209"}}}


id: PBO:0080071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 35","termid":"PBO:0080071"}


id: FYPO:0000026
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121557],"is_not":false,"summary":null,"term":"FYPO:0000026"},{"annotations":[121409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment or maintenance of cell polarity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_04280":null},"genotype_count":2,"genotypes_by_uniquename":{"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005568","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal vegetative cell polarity","references_by_uniquename":{"PMID:30664646":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00409","SJAG_04280"],"single_locus_genotype_uniquenames":["gpd1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell polarity during mitotic cell cycle","type":"related"},{"name":"abnormal cell polarity during vegetative growth","type":"exact"},{"name":"abnormal cell polarity process during vegetative growth","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity during vegetative growth","type":"exact"},{"name":"cell polarity defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000026","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000198":null,"FYPO_EXT:0000001":null}}


id: PBO:0085467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-mRNA splicing factor; important for catalytic step II of pre-mRNA splicing and plays a role in cell cycle progression, particularly at the G1/S phase transition; required for DNA synthesis during mitosis and meiosis; has WD repeats; thermosensitivity of the cdc40 null mutant is functionally complemented by a chimeric construct containing the N-terminal 156 amino acids of yeast Cdc40p fused to the C-terminal two thirds (297 amino acids) of human CDC40","termid":"PBO:0085467"}


id: PBO:0049619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 22","termid":"PBO:0049619"}


id: MONDO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuropathy that is caused by inadequate blood supply.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"ischemic neuropathy","secondary_identifiers":["SCTID:129611009","ICD9:356.9","NCIT:C27025","UMLS:C0238309","DOID:1195","MEDGEN:116055"],"synonyms":[{"name":"ischaemic peripheral neuropathy","type":"exact"},{"name":"ischemic peripheral neuropathy","type":"exact"}],"termid":"MONDO:0001408","xrefs":{"Monarch":{"xref_id":"0001408"}}}


id: GO:0102638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate + [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate = [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase activity (obsolete GO:0102638)","termid":"GO:0102638"}


id: GO:0097592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the ventral disc of Giardia species (trophozoite stage) where two portions of the same array of microtubules overlap (the microtubule array makes a complete circle and overlaps on itself).","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc overlap zone","synonyms":[{"name":"overlap zone","type":"broad"},{"name":"ventral disk overlap zone","type":"related"}],"termid":"GO:0097592"}


id: PBO:0070581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 47","termid":"PBO:0070581"}


id: GO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of various polypeptides into the exocyst complex.","definition_xrefs":["Wikipedia:Exocyst","PMID:9700152","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0065003","GO:0044085","GO:0008150","GO:0140056","GO:0016192"],"is_obsolete":false,"name":"exocyst assembly","termid":"GO:0001927"}


id: MONDO:0007900
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88384],"is_not":false,"summary":null,"term":"MONDO:0007900"}]},"cv_name":"mondo","definition":"Any inherited isolated nail anomaly in which the cause of the disease is a mutation in the PLCD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pachyonychia congenita","termid":"MONDO:0016471"},{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2555","ICD9:703.8","SCTID:74102009","MEDGEN:107463","MESH:C537289","OMIM:151600","DOID:0080081","UMLS:C0544855"],"synonyms":[{"name":"Gorlin Bushkell Jensen syndrome","type":"related"},{"name":"NDNC3","type":"related"},{"name":"PLCD1 inherited isolated nail anomaly","type":"exact"},{"name":"inherited isolated nail anomaly caused by mutation in PLCD1","type":"exact"},{"name":"leukonychia Striatus","type":"related"},{"name":"leukonychia punctata","type":"related"},{"name":"leukonychia totalis and/or partialis","type":"related"},{"name":"leukonychia totalis multiple sebaceous cysts renal calculi","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 3","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 3, (leukonychia)","type":"exact"},{"name":"nail disorder, nonsyndromic congenital, type 3","type":"exact"},{"name":"nonsyndromic congenital nail disorder type 3","type":"exact"},{"name":"porcelain nails","type":"related"}],"termid":"MONDO:0007900","terms_by_termid":{"MONDO:0007900":null},"xrefs":{"Monarch":{"xref_id":"0007900"}}}


id: GO:1900166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell-derived neurotrophic factor production.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"glial cell-derived neurotrophic factor production","termid":"GO:0044467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell-derived neurotrophic factor production","synonyms":[{"name":"regulation of GDNF secretion","type":"narrow"},{"name":"regulation of glial cell line-derived neurotrophic factor secretion","type":"related"},{"name":"regulation of glial cell-derived neurotrophic factor secretion","type":"narrow"}],"termid":"GO:1900166"}


id: PBO:0066901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 202","termid":"PBO:0066901"}


id: GO:0072564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular component organization process in which microparticles bud off from a parent cell. A microparticle is a phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:16373184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood microparticle formation","synonyms":[{"name":"microparticle generation","type":"exact"},{"name":"microparticle release","type":"exact"}],"termid":"GO:0072564"}


id: PBO:0070558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 24","termid":"PBO:0070558"}


id: PBO:0060636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-compact myelin associated protein","termid":"PBO:0060636"}


id: PBO:0083366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified ORF DIC1/YLR348C","termid":"PBO:0083366"}


id: PBO:0055241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2668","termid":"PBO:0055241"}


id: FYPO:0003960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal diacylglycerol O-acyltransferase activity","termid":"FYPO:0003958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased diacylglycerol O-acyltransferase activity","synonyms":[{"name":"increased DGAT activity","type":"exact"},{"name":"increased diacylglycerol acyltransferase activity","type":"broad"}],"termid":"FYPO:0003960"}


id: GO:0110154
data:
  {"annotated_genes":["SJAG_05010","SJAG_05694","SJAG_01625","SJAG_01746","SJAG_02374","SJAG_02370","SJAG_04640","SJAG_04880","SJAG_03023","SJAG_03157","SJAG_02213"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76299,79454,59042,81498,113997,77689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000290"},{"annotations":[80672,77922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031087"},{"annotations":[93274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110156"},{"annotations":[74964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110155"},{"annotations":[93624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of an RNA.","definition_xrefs":["PMID:25533955","PMID:31101919","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01625":null,"SJAG_01746":null,"SJAG_02213":null,"SJAG_02370":null,"SJAG_02374":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_04640":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA decapping","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0110154","terms_by_termid":{"GO:0000290":null,"GO:0031087":null,"GO:0036450":null,"GO:0110155":null,"GO:0110156":null}}


id: GO:0002417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell antigen processing and presentation which is initiated by uptake of antigen bound to the B cell receptor.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"},{"relation_name":"is_a","term_name":"antigen processing and presentation following receptor mediated endocytosis","termid":"GO:0002751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation mediated by B cell receptor uptake of antigen","synonyms":[{"name":"B lymphocyte antigen processing and presentation mediated by B cell receptor uptake of antigen","type":"exact"},{"name":"B-cell antigen processing and presentation mediated by B cell receptor uptake of antigen","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation mediated by B cell receptor uptake of antigen","type":"exact"}],"termid":"GO:0002417"}


id: PBO:0038802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM7, ADAMDEC1 and ADAM28 antisense RNA 1","termid":"PBO:0038802"}


id: MONDO:0021508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the epicardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of epicardium","termid":"MONDO:0021379"},{"relation_name":"is_a","term_name":"benign neoplasm of heart","termid":"MONDO:0021450"},{"relation_name":"is_a","term_name":"benign neoplasm of pericardium","termid":"MONDO:0021514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"benign neoplasm of epicardium","secondary_identifiers":["MEDGEN:146342","SCTID:92087008","NCIT:C8535","UMLS:C0685115","icd11.foundation:1295571347"],"synonyms":[{"name":"benign epicardial neoplasm","type":"exact"},{"name":"benign epicardial tumor","type":"exact"},{"name":"benign epicardial tumour","type":"exact"},{"name":"benign neoplasm of the epicardium","type":"exact"},{"name":"benign tumor of epicardium","type":"exact"},{"name":"benign tumor of the epicardium","type":"exact"},{"name":"benign tumour of epicardium","type":"exact"},{"name":"benign tumour of the epicardium","type":"exact"},{"name":"epicardium benign neoplasm","type":"exact"}],"termid":"MONDO:0021508","xrefs":{"Monarch":{"xref_id":"0021508"}}}


id: GO:0034890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan diol = endosulfan ether + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan diol hydrolyase (cyclizing) activity (obsolete GO:0034890)","termid":"GO:0034890"}


id: MONDO:0020413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encircling double aortic arch is a very rare congenital anomaly of the great arteries characterized by the presence of two aortic arches (right and left) which encircle and compress the trachea and esophagus, resulting in various respiratory and gastrointestinal symptoms (e.g. harsh breathing, stridor, dyspnea, cyanotic and choking episodes, chronic cough, recurrent respiratory tract infections, dysphagia and reflux). Esophageal atresia and tracheoesophageal fistula have also been reported. It usually occurs isolated, but, on occasion, may be associated with other congenital heart anomalies and chromosomal aberations.","definition_xrefs":["Orphanet:99075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic arch defects","termid":"MONDO:0015236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encircling double aortic arch","secondary_identifiers":["MEDGEN:1641325","NANDO:2200290","GARD:19635","UMLS:C4706940","SCTID:764521002"],"termid":"MONDO:0020413","xrefs":{"Monarch":{"xref_id":"0020413"}}}


id: GO:0032515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of a phosphoprotein phosphatase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphoprotein phosphatase activity (obsolete GO:0032515)","synonyms":[{"name":"down regulation of calcineurin activity","type":"narrow"},{"name":"down regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"down regulation of protein phosphatase 2 activity","type":"related"},{"name":"down regulation of protein phosphatase 3 activity","type":"related"},{"name":"down regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"down regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"down-regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"down-regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"down-regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"downregulation of calcineurin activity","type":"narrow"},{"name":"downregulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"downregulation of protein phosphatase 2 activity","type":"related"},{"name":"downregulation of protein phosphatase 3 activity","type":"related"},{"name":"downregulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"downregulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"inhibition of calcineurin activity","type":"narrow"},{"name":"inhibition of phosphoprotein phosphatase activity","type":"narrow"},{"name":"inhibition of protein phosphatase 2 activity","type":"related"},{"name":"inhibition of protein phosphatase 3 activity","type":"related"},{"name":"inhibition of protein phosphatase type 2A activity","type":"narrow"},{"name":"inhibition of protein phosphatase type 2B activity","type":"narrow"},{"name":"negative regulation of calcineurin activity","type":"narrow"},{"name":"negative regulation of protein phosphatase 2 activity","type":"related"},{"name":"negative regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"negative regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"regulation of protein phosphatase 3 activity","type":"related"}],"termid":"GO:0032515"}


id: PBO:0050365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 68","termid":"PBO:0050365"}


id: PBO:0031320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_pravastatin","termid":"PBO:0031320"}


id: PBO:0063727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 2","termid":"PBO:0063727"}


id: PBO:0059661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 27","termid":"PBO:0059661"}


id: MONDO:0018781
data:
  {"annotated_genes":["SJAG_00104","SJAG_04565"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87646,87647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"}]},"cv_name":"mondo","definition":"Keratitis (and hystrix-like) ichthyosis deafness (KID/HID) syndrome is a rare congenital ectodermal disorder characterized by vascularizing keratitis, hyperkeratotic skin lesions and hearing loss.","definition_xrefs":["Orphanet:477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_04565":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"KID syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:2625009","NORD:1326","GARD:3113","MEDGEN:777082","NANDO:1200621","NANDO:2200996","MedDRA:10048786","MESH:C536168","ICD9:759.89","OMIMPS:148210","UMLS:C3665333"],"synonyms":[{"name":"KID/HID syndrome","type":"exact"},{"name":"Keratitis Ichthyosis Deafness Syndrome","type":"exact"},{"name":"Senter syndrome","type":"exact"},{"name":"ichthyosis hystrix Rheydt type","type":"exact"},{"name":"keratitis, ichthyosis, and deafness (KID) syndrome","type":"related"},{"name":"keratitis-ichthyosis-deafness/Hystrix-like ichthyosis-deafness syndrome","type":"exact"}],"termid":"MONDO:0018781","terms_by_termid":{"MONDO:0009440":null},"xrefs":{"Monarch":{"xref_id":"0018781"}}}


id: MONDO:0010755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux, X-linked","secondary_identifiers":["UMLS:C1839114","MEDGEN:374134","OMIM:314550","MESH:C564042"],"synonyms":[{"name":"VURX","type":"related"},{"name":"vesicoureteral reflux, X-linked","type":"exact"}],"termid":"MONDO:0010755","xrefs":{"Monarch":{"xref_id":"0010755"}}}


id: MOD:00165
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 1'-mannosyl-L-tryptophan.","definition_xrefs":["PubMed:1482345","RESID:AA0156","PubMed:16150691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"1'-mannosyl-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(1-D-mannopyranosyloxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"1'-glycosyl-L-tryptophan","type":"exact"},{"name":"1'-mannosyl-L-tryptophan","type":"exact"},{"name":"CARBOHYD N-linked (Man) tryptophan","type":"exact"},{"name":"N-mannosyl-tryptophan","type":"exact"},{"name":"N1'ManTrp","type":"exact"},{"name":"N1-mannosyl-tryptophan","type":"exact"}],"termid":"MOD:00165"}


id: MONDO:0015534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign histiocytic tumor that occurs during childhood; it is distinct from Langerhans cell histiocytosis. It is characterized by the presence of lipid-laden, foamy histiocytes and Touton-type giant cells in the dermis. The lesions usually develop during infancy. They consist of cutaneous papules and nodules (most often in the head and neck). It is sometimes associated with deep soft tissues nodules.","definition_xrefs":["NCIT:C3451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"juvenile xanthogranuloma","secondary_identifiers":["MESH:D014972","GARD:20020","MEDGEN:12179","Orphanet:158000","NANDO:2200037","icd11.foundation:98595592","SCTID:400204000","UMLS:C0043324","DOID:4424","EFO:1000311"],"synonyms":[{"name":"JXG","type":"exact"},{"name":"Naevoxanthoendothelioma","type":"exact"},{"name":"juvenile xanthogranuloma","type":"exact"},{"name":"multiple eruptive juvenile xanthogranuloma","type":"exact"},{"name":"xanthoma neviforme","type":"exact"}],"termid":"MONDO:0015534","xrefs":{"Monarch":{"xref_id":"0015534"}}}


id: GO:0002869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell tolerance induction","termid":"GO:0002663"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of B cell deletion","termid":"GO:0002867"},{"relation_name":"is_a","term_name":"positive regulation of B cell apoptotic process","termid":"GO:0002904"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"B cell deletion","termid":"GO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell deletion","synonyms":[{"name":"activation of B cell deletion","type":"narrow"},{"name":"positive regulation of B lymphocyte deletion","type":"exact"},{"name":"positive regulation of B-cell deletion","type":"exact"},{"name":"positive regulation of B-lymphocyte deletion","type":"exact"},{"name":"stimulation of B cell deletion","type":"narrow"},{"name":"up regulation of B cell deletion","type":"exact"},{"name":"up-regulation of B cell deletion","type":"exact"},{"name":"upregulation of B cell deletion","type":"exact"}],"termid":"GO:0002869"}


id: PBO:0048659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GK intronic transcript 1","termid":"PBO:0048659"}


id: PBO:0087210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; seven-beta-strand lysine methyltransferase which trimethylates translation elongation factor EF2 (Eft1p and Eft2p) at lysine 509; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; ortholog of human gene FAM86A","termid":"PBO:0087210"}


id: PBO:0087248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-threonine kinase and endoribonuclease; transmembrane protein that mediates the unfolded protein response (UPR) by regulating Hac1p synthesis through HAC1 mRNA splicing; role in homeostatic adaptation to ER stress; Kar2p binds inactive Ire1p and releases from it upon ER stress","termid":"PBO:0087248"}


id: GO:1905457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphoid progenitor cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27010503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901533"},{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"negatively_regulates","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphoid progenitor cell differentiation","synonyms":[{"name":"down regulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"down-regulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"downregulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"inhibition of lymphoid progenitor cell differentiation","type":"narrow"}],"termid":"GO:1905457"}


id: MONDO:0850144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that derives from germ cells.","definition_xrefs":["DOID:0080601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell benign neoplasm","secondary_identifiers":["NCIT:C6449","MEDGEN:272358","UMLS:C1332505"],"termid":"MONDO:0850144","xrefs":{"Monarch":{"xref_id":"0850144"}}}


id: MONDO:0005995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infestation with nematode worms of the genus trichostrongylus. Humans become infected by swallowing larvae, usually with contaminated food or drink, although the larvae may penetrate human skin.","definition_xrefs":["MESH:D014253-modified"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"},{"relation_name":"is_a","term_name":"trichostrongyloidiasis","termid":"MONDO:0005994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostrongylosis","secondary_identifiers":["MESH:D014253","EFO:0007523","ICD10CM:B81.2","MEDGEN:11908","ICD9:127.6","UMLS:C0040948","DOID:1254","SCTID:33710003"],"synonyms":[{"name":"Trichostrongyliasis","type":"exact"},{"name":"Trichostrongylus caused disease or disorder","type":"exact"},{"name":"Trichostrongylus disease or disorder","type":"exact"},{"name":"Trichostrongylus infectious disease","type":"exact"},{"name":"infection by Trichostrongylus","type":"exact"},{"name":"infection by Trichostrongylus species","type":"exact"}],"termid":"MONDO:0005995","xrefs":{"Monarch":{"xref_id":"0005995"}}}


id: GO:0016256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of high-mannose N-glycans by UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase and the subsequent removal of the N-acetylglucosamine residues yielding mannose-6-P that occurs in the ER-Golgi apparatus to N-glycans destined for the lysosome.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"},{"relation_name":"part_of","term_name":"protein targeting to lysosome","termid":"GO:0006622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006605","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"N-glycan processing to lysosome","termid":"GO:0016256"}


id: PBO:0003757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Scr1","termid":"PBO:0003757"}


id: GO:0008937
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008860"},{"annotations":[111667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004324"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced ferredoxin + NAD(P)+ = oxidized ferredoxin + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor","termid":"GO:0016731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ferredoxin-[NAD(P)H] reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ferredoxin reductase activity","type":"broad"}],"termid":"GO:0008937","terms_by_termid":{"GO:0004324":null,"GO:0008860":null}}


id: PBO:0047403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 41","termid":"PBO:0047403"}


id: GO:0038123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding of a heterodimeric TLR1:TLR2 complex, followed by transmission of the signal by the activated receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","PMID:17318230","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor TLR1:TLR2 signaling pathway","secondary_identifiers":["Reactome:R-HSA-168179"],"synonyms":[{"name":"TLR2:TLR1 signaling pathway","type":"exact"},{"name":"toll-like receptor TLR1:TLR2 signalling pathway","type":"exact"}],"termid":"GO:0038123"}


id: PBO:0085841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YDL129W is not an essential gene; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085841"}


id: GO:0004038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: allantoin + H2O = allantoate.","definition_xrefs":["EC:3.5.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"allantoinase activity","secondary_identifiers":["RHEA:17029","MetaCyc:ALLANTOINASE-RXN"],"synonyms":[{"name":"(S)-allantoin amidohydrolase activity","type":"related"}],"termid":"GO:0004038"}


id: PBO:0033772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pointed_nucleus_during_mitotic_interphase","termid":"PBO:0033772"}


id: PBO:0051619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2 pseudogene 1","termid":"PBO:0051619"}


id: PR:000044702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht2/Me(K9)","termid":"PR:000027593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044702"}


id: GO:1903064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of reverse cholesterol transport.","definition_xrefs":["PMID:23931754","GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"is_a","term_name":"regulation of reverse cholesterol transport","termid":"GO:1903062"},{"relation_name":"positively_regulates","term_name":"reverse cholesterol transport","termid":"GO:0043691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of reverse cholesterol transport","synonyms":[{"name":"activation of reverse cholesterol transport","type":"narrow"},{"name":"up regulation of reverse cholesterol transport","type":"exact"},{"name":"up-regulation of reverse cholesterol transport","type":"exact"},{"name":"upregulation of reverse cholesterol transport","type":"exact"}],"termid":"GO:1903064"}


id: MONDO:0032653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac-urogenital syndrome","secondary_identifiers":["Orphanet:647811","UMLS:C4748946","MEDGEN:1648333","OMIM:618280"],"synonyms":[{"name":"CARDIAC-UROGENITAL SYNDROME","type":"exact"},{"name":"CUGS","type":"exact"}],"termid":"MONDO:0032653","xrefs":{"Monarch":{"xref_id":"0032653"}}}


id: GO:0018394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-lysine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine acetylation","termid":"GO:0018394"}


id: MOD:01695
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an 3-(carboxamidomethylthio)propanoyl group.","definition_xrefs":["PubMed:15121203","Unimod:293#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-(carboxamidomethylthio)propanoylated residue","termid":"MOD:00612"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino 3-(carboxamidomethylthio)propanoylated residue","synonyms":[{"name":"3-(carbamidomethylthio)propanoyl","type":"related"},{"name":"CAMthiopropanoyl","type":"related"}],"termid":"MOD:01695"}


id: PBO:0056668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 6","termid":"PBO:0056668"}


id: FYPO:0003026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) begins later than normal. Synapsis is the process in which the side by side pairing and physical juxtaposition of homologous chromosomes is established and maintained. Pairing may be assayed globally or at one or more specific loci.","definition_xrefs":["PomBase:mah","GO:0007129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of homologous chromosome pairing","synonyms":[{"name":"delayed homologous chromosome pairing","type":"exact"},{"name":"delayed onset of homologous chromosome pairing at meiosis","type":"exact"},{"name":"delayed onset of synapsis","type":"exact"}],"termid":"FYPO:0003026"}


id: MONDO:0957442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive ataxia due to PEX16 deficiency","secondary_identifiers":["MEDGEN:1843419","Orphanet:642954","UMLS:C5816797"],"termid":"MONDO:0957442","xrefs":{"Monarch":{"xref_id":"0957442"}}}


id: PBO:0056552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 2","termid":"PBO:0056552"}


id: GO:0102570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: keto-phenylpyruvate + L-tyrosine = L-phenylalanine + 3-(4-hydroxyphenyl)pyruvate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine:phenylpyruvate aminotransferase activity (obsolete GO:0102570)","termid":"GO:0102570"}


id: GO:0044598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving doxorubicin, an anthracycline antibiotic, used in cancer chemotherapy.","definition_xrefs":["PMID:10200167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"doxorubicin metabolic process","termid":"GO:0044598"}


id: PBO:0078347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 13-1","termid":"PBO:0078347"}


id: SO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CAGE tag is a sequence tag hat corresponds to 5' ends of mRNA at cap sites, produced by cap analysis gene expression and used to identify transcriptional start sites.","definition_xrefs":["SO:andrewgibson"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAGE_tag","synonyms":[{"name":"CAGE tag","type":"exact"}],"termid":"SO:0001916"}


id: MONDO:0007054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromial dimples","secondary_identifiers":["MEDGEN:869278","OMIM:102350","UMLS:C4023704"],"synonyms":[{"name":"acromial dimples","type":"exact"},{"name":"supraspinous fossae, congenital","type":"related"}],"termid":"MONDO:0007054","xrefs":{"Monarch":{"xref_id":"0007054"}}}


id: PBO:0058555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6134","termid":"PBO:0058555"}


id: GO:0051416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to myotilin, a structural component of the Z-discs in human skeletal and cardiac muscle. Its C-terminus contains two immunoglobulin-like domains and the unique N-terminal half has a serine-rich region, with numerous potential phosphorylation sites, and a stretch of hydrophobic amino acids. Myotilin forms homodimers and binds to alpha-actinin, F-actin, and filamin C.","definition_xrefs":["PMID:11699871","PMID:15752755"],"gene_count":0,"genotype_count":0,"name":"obsolete myotilin binding (obsolete GO:0051416)","synonyms":[{"name":"myotilin binding","type":"exact"}],"termid":"GO:0051416"}


id: PBO:0058417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4786","termid":"PBO:0058417"}


id: GO:1903478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any actin filament bundle convergence that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000060","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament bundle convergence involved in mitotic contractile ring assembly (obsolete GO:1903478)","synonyms":[{"name":"actin filament bundle convergence involved in actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"actin filament bundle convergence involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament bundle convergence involved in cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament bundle convergence involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903478"}


