# terms

id: PBO:0110390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 59","termid":"PBO:0110390"}


id: GO:1902346
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102604],"is_not":false,"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"Any meiotic strand displacement that is involved in double-strand break repair via synthesis-dependent strand annealing (SDSA).","definition_xrefs":["PMID:22723423","GOC:al","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand displacement","termid":"GO:0000714"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0007049","GO:0006281"],"is_obsolete":false,"name":"meiotic strand displacement involved in double-strand break repair via SDSA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic D-loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic D-loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic strand displacement involved in SDSA","type":"broad"},{"name":"meiotic strand displacement involved in double-strand break repair via synthesis-dependent strand annealing","type":"exact"},{"name":"meiotic strand displacement involved in mitotic gene conversion","type":"related"}],"termid":"GO:1902346","terms_by_termid":{"GO:1902346":null}}


id: PBO:0077969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 21-1","termid":"PBO:0077969"}


id: GO:0031221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arabinan, a polysaccharide composed of arabinose residues.","definition_xrefs":["ISBN:0198506732","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"arabinan metabolic process","synonyms":[{"name":"arabinan metabolism","type":"exact"}],"termid":"GO:0031221"}


id: GO:0052340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction (obsolete GO:0052340)","synonyms":[{"name":"catabolism by organism of cell wall cellulose in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052340"}


id: PBO:0119876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Cbp6","termid":"PBO:0119876"}


id: MONDO:0010880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary hemorrhagic telangiectasia in which the cause of the disease is a mutation in the ACVRL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemorrhagic telangiectasia","termid":"MONDO:0019180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"telangiectasia, hereditary hemorrhagic, type 2","secondary_identifiers":["OMIM:600376","UMLS:C1838163","GARD:9901","MEDGEN:324960"],"synonyms":[{"name":"ACVRL1 hereditary hemorrhagic telangiectasia","type":"exact"},{"name":"HHT2","type":"related"},{"name":"ORW2","type":"related"},{"name":"Osler Weber Rendu syndrome type 2","type":"related"},{"name":"hereditary hemorrhagic telangiectasia caused by mutation in ACVRL1","type":"exact"},{"name":"hereditary hemorrhagic telangiectasia type 2","type":"related"},{"name":"pulmonary arterial hypertension, hereditary hemorrhagic telangiectasia-related","type":"related"},{"name":"telangiectasia hereditary hemorrhagic type 2","type":"related"},{"name":"telangiectasia, hereditary hemorrhagic, type 2","type":"exact"}],"termid":"MONDO:0010880","xrefs":{"Monarch":{"xref_id":"0010880"}}}


id: GO:0009157
data:
  {"annotated_genes":["SJAG_04487","SJAG_04627","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81348,71801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[81371,71800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"deoxyribonucleoside monophosphate anabolism","type":"exact"},{"name":"deoxyribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"deoxyribonucleoside monophosphate formation","type":"exact"},{"name":"deoxyribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009157","terms_by_termid":{"GO:0006226":null,"GO:0006231":null}}


id: FYPO:0003623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein threonine phosphorylation during cellular response to heat (obsolete FYPO:0003623)","synonyms":[{"name":"normal protein threonine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein threonine phosphorylation during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003623"}


id: PBO:0017580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Rcf2","termid":"PBO:0017580"}


id: GO:0050968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of pain in which a chemical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of pain","synonyms":[{"name":"chemical nociception","type":"related"},{"name":"perception of pain, detection of chemical stimulus","type":"exact"},{"name":"perception of pain, sensory detection of chemical stimulus","type":"exact"},{"name":"perception of pain, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of pain","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of pain","type":"exact"}],"termid":"GO:0050968"}


id: GO:0060878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelial sheet bends along a linear axis and gives rise to a pouch that will form a semicircular canal.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"semicircular canal formation","termid":"GO:0060876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pouch outgrowth involved in semicircular canal formation","termid":"GO:0060878"}


id: PBO:0070312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 1","termid":"PBO:0070312"}


id: PBO:0052231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 8","termid":"PBO:0052231"}


id: MONDO:0700036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal tumor characterized by mixed features of both fibroma and thecoma.","direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrothecoma","secondary_identifiers":["MEDGEN:1668953","UMLS:C4721918"],"termid":"MONDO:0700036","xrefs":{"Monarch":{"xref_id":"0700036"}}}


id: PBO:0042671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 5","termid":"PBO:0042671"}


id: MONDO:0018301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare chronic debilitating urogenital disease characterized by urinary frequency, urgency, and pelvic pain.","definition_xrefs":["Orphanet:37202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"chronic cystitis","termid":"MONDO:0006030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial cystitis","secondary_identifiers":["UMLS:C0282488","EFO:0008507","MedDRA:10011796","DOID:13949","icd11.foundation:1650709285","MEDGEN:129176","SCTID:111409009","MedDRA:10008927","SCTID:197834003","ICD10CM:N30.1","DOID:1678","NANDO:1200743","ICD9:595.1","GARD:18825","MESH:D018856","NCIT:C27189"],"synonyms":[{"name":"IC/BPS","type":"exact"},{"name":"IC/PBS","type":"exact"},{"name":"bladder pain syndrome","type":"exact"},{"name":"chronic interstitial cystitis","type":"exact"},{"name":"interstitial cystitis, chronic","type":"exact"},{"name":"interstitial cystitis/bladder pain syndrome","type":"exact"},{"name":"interstitial cystitis/painful bladder syndrome","type":"exact"},{"name":"painful bladder syndrome","type":"exact"},{"name":"ulcerative cystitis","type":"exact"}],"termid":"MONDO:0018301","xrefs":{"Monarch":{"xref_id":"0018301"}}}


id: MONDO:0004832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the lower part of the esophagus. It is the most common mesenchymal neoplasm of the esophagus. Dysphagia is a frequent clinical symptom.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of esophagus","termid":"MONDO:0021459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophagus leiomyoma","secondary_identifiers":["DOID:960","SCTID:276805005","UMLS:C0238114","NCIT:C3866","MEDGEN:65947"],"synonyms":[{"name":"esophageal leiomyoma","type":"exact"},{"name":"esophagus leiomyoma","type":"exact"},{"name":"leiomyoma of esophagus","type":"exact"},{"name":"leiomyoma of oesophagus","type":"exact"},{"name":"leiomyoma of the esophagus","type":"exact"},{"name":"leiomyoma of the oesophagus","type":"exact"}],"termid":"MONDO:0004832","xrefs":{"Monarch":{"xref_id":"0004832"}}}


id: MONDO:1010481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in snow leopard.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, snow leopard","secondary_identifiers":["OMIA:000994-29064"],"termid":"MONDO:1010481","xrefs":{"Monarch":{"xref_id":"1010481"}}}


id: PBO:0088556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex WD repeat protein Elp1","termid":"PBO:0088556"}


id: FYPO:0005179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) exposure during mitotic G1 phase is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to UV. The most common abnormality is for the cell cycle to progress as in the absence of UV.","definition_xrefs":["PMID:15498101","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle delay following UV exposure during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ultraviolet light during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to UV during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005179"}


id: PBO:0057516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 634","termid":"PBO:0057516"}


id: MONDO:0001275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal meningioma isa rare type of spinal cord cancer. The spinal cord is part of the central nervous system. This tumor often affects middle-aged women. Tumors of the spinal cord can be either primary or arise from other primary tumors (metastatic), and are typically slow growing. The initial signs and symptoms include headacheand recent onset of seizures. Other features are motor deficits, sensory deficits, pain, and sphincter dysfunction. The thoracic spine (middle back) is the most common site, followed by the cervical spine (neck). These tumors are rarely seen in the lumbar region (lower back). T he only proven risk factor in the development of meningioma is exposure to ionizing radiation. Also, patients with neurofibromatosis type 2 are at increased risk of developing meningioma. Surgery is the treatment of choice and complete tumor removal is reached in the vast majority of patients. The prognosis after surgical resection is excellent.","direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal meningioma","secondary_identifiers":["MEDGEN:87576","UMLS:C0347515","DOID:1138","GARD:10264","NCIT:C6935","SCTID:189167009"],"synonyms":[{"name":"meningioma (disease) of spinal cord","type":"exact"},{"name":"meningioma of spinal cord","type":"exact"},{"name":"meningioma of the spinal cord","type":"exact"},{"name":"meningioma, spine","type":"related"},{"name":"spinal cord meningioma","type":"exact"},{"name":"spinal cord meningioma (disease)","type":"exact"}],"termid":"MONDO:0001275","xrefs":{"Monarch":{"xref_id":"0001275"}}}


id: GO:0009538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.","definition_xrefs":["GOC:kd","ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"photosystem I","termid":"GO:0009522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"photosystem I reaction center","synonyms":[{"name":"photosystem I reaction centre","type":"exact"}],"termid":"GO:0009538"}


id: GO:0010495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An siRNA-mediated posttranscriptional gene silencing pathway in which small interfering RNAs (siRNAs) direct the cleavage of target mRNAs, and in which the silencing signal originates in one tissue and occurs in a different tissue.","definition_xrefs":["PMID:11590235","PMID:17785412","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0090625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"siRNA-mediated long-distance post-transcriptional gene silencing","synonyms":[{"name":"long-distance posttranscriptional gene silencing","type":"broad"},{"name":"long-distance propagation of posttranscriptional gene silencing","type":"broad"},{"name":"siRNA-mediated long-distance posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0010495"}


id: PBO:0074024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15 pseudogene 2","termid":"PBO:0074024"}


id: GO:0018835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alkylphosphonic acid = R-CH3 + phosphate. Substrates include aminomethylphosphonic acid (AMPA) (forms methylamine), dimethylphosphinic acid (forms methylphosphonic acid), glyphosate (forms sarcosine) and methylphosphonic acid (forms phosphate).","definition_xrefs":["PMID:3804975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbon phosphorus lyase activity","secondary_identifiers":["GO:0009456","EC:4.7.1.-"],"termid":"GO:0018835"}


id: PBO:0057534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 650","termid":"PBO:0057534"}


id: MONDO:1010711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trimethylaminuria (fishy taint) that occurs in Japanese quail.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"trimethylaminuria (fishy taint), non-human animal","termid":"MONDO:1010104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylaminuria (fishy taint), Japanese quail","secondary_identifiers":["OMIA:001360-93934"],"termid":"MONDO:1010711","xrefs":{"Monarch":{"xref_id":"1010711"}}}


id: GO:0106138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Sec61 translocon complex.","definition_xrefs":["GOC:pga","PMID:9792704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Sec61 translocon complex binding","termid":"GO:0106138"}


id: GO:0019241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrulline metabolic process","termid":"GO:0000052"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-citrulline catabolic process","secondary_identifiers":["MetaCyc:CITRULLINE-DEG-PWY"],"synonyms":[{"name":"citrulline breakdown","type":"exact"},{"name":"citrulline catabolism","type":"exact"},{"name":"citrulline degradation","type":"exact"}],"termid":"GO:0019241"}


id: MONDO:0004236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A somatostatin-producing neuroendocrine tumor that arises from the duodenum. It is characterized by the presence of tubulo-glandular structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"duodenum cancer","termid":"MONDO:0000920"},{"relation_name":"is_a","term_name":"duodenal neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal somatostatinoma","secondary_identifiers":["MEDGEN:234205","DOID:7479","NCIT:C27407","UMLS:C1333320"],"synonyms":[{"name":"duodenal delta cell somatostatin producing tumor","type":"exact"},{"name":"duodenal delta cell somatostatin producing tumour","type":"exact"},{"name":"duodenal somatostatin producing tumor","type":"exact"},{"name":"duodenal somatostatin producing tumour","type":"exact"},{"name":"duodenal somatostatin-producing NET","type":"exact"},{"name":"duodenal somatostatin-producing neuroendocrine tumor","type":"exact"},{"name":"duodenal somatostatin-producing neuroendocrine tumour","type":"exact"},{"name":"duodenal somatostatinoma","type":"exact"}],"termid":"MONDO:0004236","xrefs":{"Monarch":{"xref_id":"0004236"}}}


id: MONDO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the soft tissue.","definition_xrefs":["NCIT:C8810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosarcoma","termid":"MONDO:0009807"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extraosseous osteosarcoma","secondary_identifiers":["UMLS:C0855052","ICD9:170.9","MEDGEN:163186","SCTID:404077005","DOID:3357"],"synonyms":[{"name":"extraosseous osteosarcoma","type":"exact"},{"name":"extraskeletal osteogenic sarcoma","type":"exact"},{"name":"extraskeletal osteosarcoma","type":"exact"},{"name":"osteosarcoma, extraskeletal, malignant","type":"exact"},{"name":"soft tissue osteosarcoma","type":"exact"}],"termid":"MONDO:0002621","xrefs":{"Monarch":{"xref_id":"0002621"}}}


id: FYPO:0005343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased during anaphase B.","definition_xrefs":["PomBase:mah","PMID:19686686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000337","FYPO:0000631","FYPO:0001320","FYPO:0000054","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of mitotic spindle elongation during anaphase B","synonyms":[{"name":"decreased rate of mitotic spindle elongation during anaphase B during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic spindle elongation during mitotic anaphase B","type":"exact"},{"name":"decreased rate of mitotic spindle extension during anaphase B","type":"exact"},{"name":"decreased rate of spindle elongation during anaphase B of mitosis","type":"exact"},{"name":"reduced rate of mitotic spindle elongation during anaphase B","type":"exact"}],"termid":"FYPO:0005343"}


id: MONDO:0003200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the urethra","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"carcinoma of urethra","termid":"MONDO:0021327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urethra adenocarcinoma","secondary_identifiers":["UMLS:C1336885","ONCOTREE:UAD","DOID:4910","NCIT:C6167","MEDGEN:234461"],"synonyms":[{"name":"UAD","type":"related"},{"name":"adenocarcinoma of the urethra","type":"exact"},{"name":"adenocarcinoma of urethra","type":"exact"},{"name":"urethra adenocarcinoma","type":"exact"},{"name":"urethral adenocarcinoma","type":"exact"}],"termid":"MONDO:0003200","xrefs":{"Monarch":{"xref_id":"0003200"}}}


id: MONDO:0020772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete adolescent/adult-onset epilepsy syndrome (obsolete MONDO:0100030)","termid":"MONDO:0100030"},{"relation_name":"excluded_subClassOf","term_name":"juvenile absence epilepsy","termid":"MONDO:0800453"},{"relation_name":"is_a","term_name":"epilepsy, juvenile absence, susceptibility to","termid":"MONDO:1030001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile absence, susceptibility to, 1","secondary_identifiers":["UMLS:C2750892","MEDGEN:413426","DOID:0111324","OMIM:607631"],"synonyms":[{"name":"EJA1","type":"exact"},{"name":"EPILEPSY, JUVENILE ABSENCE, SUSCEPTIBILITY TO, 1","type":"exact"},{"name":"JAE1","type":"exact"},{"name":"epilepsy, juvenile absence, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to juvenile absence epilepsy 1","type":"exact"}],"termid":"MONDO:0020772","xrefs":{"Monarch":{"xref_id":"0020772"}}}


id: MONDO:0100420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly KIT gene mutation. (A molecular genetic abnormality that refers to mutation of the c-kit (CD117) proto-oncogene. It is associated with the development of gastrointestinal stromal tumor and gastrointestinal autonomic nerve tumor. It has also been described in acute myeloid leukemias, dysgerminomas, and seminomas.)","definition_xrefs":["NCIT:C39712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, KIT gene mutation","synonyms":[{"name":"AML, C-KIT Mutation","type":"exact"},{"name":"AML, CD117 Gene Mutation","type":"exact"},{"name":"AML, CD117 Mutation","type":"exact"},{"name":"AML, KIT Proto-Oncogene Tyrosine Protein Kinase Gene Mutation","type":"exact"},{"name":"AML, KIT gene mutation","type":"exact"},{"name":"AML, V-Kit Hardy-Zuckerman 4 Feline Sarcoma Viral Oncogene Homolog Gene Mutation","type":"exact"},{"name":"AML, c-KIT Gene Mutation","type":"exact"}],"termid":"MONDO:0100420","xrefs":{"Monarch":{"xref_id":"0100420"}}}


id: PBO:0069928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1220, pseudogene","termid":"PBO:0069928"}


id: PBO:0082158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenine deaminase (adenine aminohydrolase); converts adenine to hypoxanthine; involved in purine salvage; transcriptionally regulated by nutrient levels and growth phase; Aah1p degraded upon entry into quiescence via SCF and the proteasome","termid":"PBO:0082158"}


id: MONDO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the meninges of the brain and/or spinal cord caused by an infectious agent (viral, bacterial, or fungal). Symptoms include headache, fever, vomiting, neck stiffness, photophobia, confusion, and seizures.","definition_xrefs":["NCIT:C79598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningitis","termid":"MONDO:0021108"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious meningitis","secondary_identifiers":["ICD9:321.8","SCTID:312216007","UMLS:C0729584","ICD9:322","HP:0001287","DOID:9471","ICD9:322.9","MEDGEN:152668","EFO:0000584"],"synonyms":[{"name":"infectious meningitis","type":"exact"},{"name":"infective meningitis","type":"exact"},{"name":"meningitis","type":"related"}],"termid":"MONDO:0004796","xrefs":{"Monarch":{"xref_id":"0004796"}}}


id: FYPO:0006805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a galactosyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal galactosyltransferase activity","termid":"FYPO:0006805"}


id: PBO:0077140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 1","termid":"PBO:0077140"}


id: PBO:0072249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 24","termid":"PBO:0072249"}


id: GO:0150152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-17A production.","definition_xrefs":["GOC:aruk","PMID:27901018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of interleukin-17 production","termid":"GO:0032700"},{"relation_name":"is_a","term_name":"regulation of interleukin-17A production","termid":"GO:0150151"},{"relation_name":"negatively_regulates","term_name":"interleukin-17A production","termid":"GO:0097087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17A production","synonyms":[{"name":"negative regulation of interleukin-17A biosynthetic process","type":"narrow"}],"termid":"GO:0150152"}


id: MONDO:0005447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the testis. Representative examples include seminoma, embryonal carcinoma, sarcoma, leukemia, and lymphoma.","definition_xrefs":["NCIT:C7251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular cancer","secondary_identifiers":["DOID:2998","ICD10CM:C62","MEDGEN:56313","MESH:D013736","UMLS:C0153594","ICD9:186","SCTID:363449006","NCIT:C5053","ICD9:186.9","EFO:0005088"],"synonyms":[{"name":"cancer of testis","type":"exact"},{"name":"malignant neoplasm of testis","type":"exact"},{"name":"malignant neoplasm of the testis","type":"exact"},{"name":"malignant testicular neoplasm","type":"exact"},{"name":"malignant testicular tumor","type":"exact"},{"name":"malignant testicular tumour","type":"exact"},{"name":"malignant testis neoplasm","type":"exact"},{"name":"malignant tumor of testis","type":"exact"},{"name":"malignant tumor of the testis","type":"exact"},{"name":"malignant tumour of testis","type":"exact"},{"name":"malignant tumour of the testis","type":"exact"},{"name":"paediatric testicular neoplasm","type":"related"},{"name":"testicular tumor","type":"broad"},{"name":"testicular tumour","type":"broad"},{"name":"testis cancer","type":"exact"},{"name":"testis neoplasm","type":"broad"}],"termid":"MONDO:0005447","xrefs":{"Monarch":{"xref_id":"0005447"}}}


id: MONDO:0010196
data:
  {"annotated_genes":["SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88771],"is_not":false,"summary":null,"term":"MONDO:0010196"}]},"cv_name":"mondo","definition":"A rare inherited syndrome characterized by premature aging with onset in the third decade of life and with cardinal clinical features including bilateral cataracts, short stature, graying and thinning of scalp hair, characteristic skin disorders and premature onset of additional age-related disorders.","definition_xrefs":["Orphanet:902"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"hereditary poikiloderma","termid":"MONDO:0016382"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"Werner syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D014898","NANDO:2200831","NCIT:C3447","NORD:1845","NANDO:1200676","SCTID:51626007","UMLS:C0043119","GARD:7885","MEDGEN:12147","OMIM:277700","DOID:5688","icd11.foundation:1864550134","ICD9:259.8","MedDRA:10049429"],"synonyms":[{"name":"WRN","type":"related"},{"name":"WS","type":"exact"},{"name":"Werner syndrome","type":"exact"},{"name":"Werner's syndrome","type":"exact"},{"name":"adult premature ageing syndrome","type":"exact"},{"name":"adult premature aging syndrome","type":"exact"},{"name":"adult progeria","type":"exact"}],"termid":"MONDO:0010196","terms_by_termid":{"MONDO:0010196":null},"xrefs":{"Monarch":{"xref_id":"0010196"}}}


id: GO:0097026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of dendrites, branched cellular projections (or cytoplasmic extension) that are extended from the surface of a dendritic immune cell, and which enable the cell to sample luminal pathogens and increase the surface area for antigen presentation to T cells.","definition_xrefs":["CL:0000451","GOC:BHF","PMID:12200351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"dendritic cell dendrite assembly","synonyms":[{"name":"dendritic extension","type":"broad"}],"termid":"GO:0097026"}


id: PBO:0042732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein J","termid":"PBO:0042732"}


id: PBO:0090063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11","termid":"PBO:0090063"}


id: PBO:0080819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xyloside xylosyltransferase 1","termid":"PBO:0080819"}


id: MONDO:0010008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sarcosinemia is a metabolic disorder characterized by an increased concentration of sarcosine in plasma and urine due to sarcosine dehydrogenase deficiency.","definition_xrefs":["Orphanet:3129"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of serine family metabolism","termid":"MONDO:0019239"},{"relation_name":"is_a","term_name":"inborn disorder of serine family metabolism","termid":"MONDO:0019239"},{"relation_name":"is_a","term_name":"glycine metabolism disease","termid":"MONDO:0045020"},{"relation_name":"is_a","term_name":"disorder of methylamine metabolism","termid":"MONDO:0100477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"sarcosinemia","secondary_identifiers":["ICD9:270.8","DOID:0112307","GARD:158","icd11.foundation:1901733714","UMLS:C0268563","MEDGEN:120651","MedDRA:10059299","OMIM:268900","MESH:C537236","SCTID:64852002"],"synonyms":[{"name":"SARCOS","type":"related"},{"name":"SARD deficiency","type":"related"},{"name":"SARDH deficiency","type":"related"},{"name":"hypersarcosinemia","type":"related"},{"name":"sarcosine dehydrogenase complex deficiency","type":"related"},{"name":"sarcosinemia","type":"exact"}],"termid":"MONDO:0010008","xrefs":{"Monarch":{"xref_id":"0010008"}}}


id: PBO:0051782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing E","termid":"PBO:0051782"}


id: MONDO:0016488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Beta-thalassemias associated with hemoglobin (Hb) anomalies result in a variable clinical spectrum, ranging from asymptomatic to severe, depending on the severity of the thalassemia mutation and on the type of the Hb anomaly [hereditary persistence of fetal Hb, delta-beta-thalassemia, Hb C - beta-thalassemia, Hb E - beta-thalassemia and Hb S - beta-thalassemia ].","definition_xrefs":["Orphanet:231230"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-thalassemia associated with another hemoglobin anomaly (obsolete MONDO:0016488)","synonyms":[{"name":"Beta-thalassemia associated with another Hb anomaly","type":"exact"}],"termid":"MONDO:0016488","xrefs":{"Monarch":{"xref_id":"0016488"}}}


id: GO:0006750
data:
  {"annotated_genes":["SJAG_00988","SJAG_03494","SJAG_01351","SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58127,79324,80627,110408],"is_not":false,"summary":null,"term":"GO:0006750"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.","definition_xrefs":["GOC:ai","GOC:al","GOC:pde","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione metabolic process","termid":"GO:0006749"},{"relation_name":"is_a","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUTATHIONESYN-PWY","Reactome:R-HSA-174403"],"synonyms":[{"name":"glutathione anabolism","type":"exact"},{"name":"glutathione biosynthesis","type":"exact"},{"name":"glutathione formation","type":"exact"},{"name":"glutathione synthesis","type":"exact"}],"termid":"GO:0006750","terms_by_termid":{"GO:0006750":null}}


id: GO:1900941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900941"}


id: PBO:0089980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1","termid":"PBO:0089980"}


id: GO:0097584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt5p-Pmt2p.","definition_xrefs":["GOC:jd","PMID:12551906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005789","GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt5p-Pmt2p dimer complex","synonyms":[{"name":"Pmt5p-Pmt2p complex","type":"narrow"}],"termid":"GO:0097584"}


id: GO:0090139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which mitochondrial chromosomal DNA and associated proteins organize into a compact, orderly structure.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial chromosome packaging","synonyms":[{"name":"mitochondrial DNA packaging","type":"exact"}],"termid":"GO:0090139"}


id: PBO:0003567
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unsupported by transcription data","termid":"PBO:0003567"}


id: GO:0072009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nephron epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The nephron epithelium is a tissue that covers the surface of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney epithelium development","termid":"GO:0072073"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron epithelium development","termid":"GO:0072009"}


id: PBO:0065086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit beta 1","termid":"PBO:0065086"}


id: PBO:0077402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 135","termid":"PBO:0077402"}


id: PBO:0070113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 27 pseudogene","termid":"PBO:0070113"}


id: GO:1901658
data:
  {"annotated_genes":["SJAG_04927","SJAG_01673","SJAG_02959","SJAG_00957","SJAG_01359","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89530,89531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[91142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006216"},{"annotations":[114167,77154,93020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[92598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosyl compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycosyl compound breakdown","type":"exact"},{"name":"glycosyl compound catabolism","type":"exact"},{"name":"glycosyl compound degradation","type":"exact"}],"termid":"GO:1901658","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006216":null,"GO:0046135":null}}


id: PBO:0034712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein Crd1 (predicted)","termid":"PBO:0034712"}


id: GO:0009435
data:
  {"annotated_genes":["SJAG_02618","SJAG_04693","SJAG_03298","SJAG_01500","SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76645,79537,115082],"is_not":false,"summary":null,"term":"GO:0009435"},{"annotations":[81952,72700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD+), a coenzyme that interconverts with its reduced form, NADH, in many redox and catabolic reactions. NAD+ is derived from various sources including vitamin B3.","definition_xrefs":["PMID:28648096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"},{"relation_name":"is_a","term_name":"NAD+ metabolic process","termid":"GO:0019674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01500":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"NAD+ biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006736"],"synonyms":[{"name":"NAD (oxidized) biosynthesis","type":"exact"},{"name":"NAD (oxidized) biosynthetic process","type":"exact"},{"name":"NAD (reduced) biosynthesis","type":"exact"},{"name":"NAD (reduced) biosynthetic process","type":"exact"},{"name":"NAD anabolism","type":"exact"},{"name":"NAD biosynthesis","type":"exact"},{"name":"NAD biosynthetic process","type":"exact"},{"name":"NAD formation","type":"exact"},{"name":"NAD synthesis","type":"exact"},{"name":"NADH biosynthesis","type":"exact"},{"name":"NADH biosynthetic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"oxidized NAD biosynthesis","type":"exact"},{"name":"oxidized NAD biosynthetic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"reduced NAD biosynthesis","type":"exact"},{"name":"reduced NAD biosynthetic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthetic process","type":"exact"}],"termid":"GO:0009435","terms_by_termid":{"GO:0009435":null,"GO:0034355":null}}


id: GO:2001200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte differentiation","termid":"GO:1902107"},{"relation_name":"is_a","term_name":"regulation of dendritic cell differentiation","termid":"GO:2001198"},{"relation_name":"positively_regulates","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell differentiation","termid":"GO:2001200"}


id: GO:0062054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a fluoride ion through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:25156118","PMID:23991286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"fluoride transmembrane transporter activity","termid":"GO:1903425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fluoride channel activity","termid":"GO:0062054"}


id: MONDO:0023221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gaucher ichthyosis restrictive dermopathy","termid":"MONDO:0023221","xrefs":{"Monarch":{"xref_id":"0023221"}}}


id: PBO:0044469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 7 subfamily B member 1","termid":"PBO:0044469"}


id: PBO:0080043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 29","termid":"PBO:0080043"}


id: GO:0032092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"},{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein binding","synonyms":[{"name":"activation of protein binding","type":"narrow"},{"name":"stimulation of protein binding","type":"narrow"},{"name":"up regulation of protein binding","type":"exact"},{"name":"up-regulation of protein binding","type":"exact"},{"name":"upregulation of protein binding","type":"exact"}],"termid":"GO:0032092"}


id: GO:0032274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a gonadotropin, any hormone that stimulates the gonads, especially follicle-stimulating hormone and luteinizing hormone.","definition_xrefs":["GOC:mah","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"gonadotropin secretion","synonyms":[{"name":"gonadotrophin secretion","type":"exact"}],"termid":"GO:0032274"}


id: GO:0070584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of a mitochondrion are generated and organized.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrion morphogenesis (obsolete GO:0070584)","termid":"GO:0070584"}


id: GO:0009404
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"toxin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"toxin metabolism","type":"exact"}],"termid":"GO:0009404","terms_by_termid":{"GO:0043387":null}}


id: PBO:0075620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 1","termid":"PBO:0075620"}


id: MONDO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by certain species of Rickettsia or Borrelia, which are transmitted to humans from infected lice; it is characterized by sudden fever, chills, headaches, myalgia, arthralgia, nausea, and possibly a rash. Symptoms usually persist for two to nine days, then disappear, with recurrence after several weeks if the patient remains untreated.","definition_xrefs":["NCIT:C128426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relapsing fever","termid":"MONDO:0019633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"louse-borne relapsing fever","secondary_identifiers":["ICD10CM:A68.0","icd11.foundation:1379934125","UMLS:C0152061","MEDGEN:508863","DOID:13035","ICD9:087.0","SCTID:14683004"],"synonyms":[{"name":"Relapsing fever, louse-borne","type":"exact"}],"termid":"MONDO:0001620","xrefs":{"Monarch":{"xref_id":"0001620"}}}


id: PBO:0079319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 9B","termid":"PBO:0079319"}


id: GO:0043798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glycerate + ATP = 2-phospho-D-glycerate + ADP.","definition_xrefs":["RHEA:27377","PMID:14413719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016491","GO:0016301"],"is_obsolete":false,"name":"glycerate 2-kinase activity","secondary_identifiers":["MetaCyc:GKI-RXN","EC:2.7.1.165"],"synonyms":[{"name":"D-glycerate 2-kinase activity","type":"exact"},{"name":"glycerate kinase","type":"broad"}],"termid":"GO:0043798"}


id: PBO:0029913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lanosterol_level","termid":"PBO:0029913"}


id: GO:0043248
data:
  {"annotated_genes":["SJAG_04197","SJAG_00126","SJAG_04602","SJAG_04290","SJAG_00954","SJAG_01652","SJAG_04844","SJAG_02570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58881,59911,63438,106299],"is_not":false,"summary":null,"term":"GO:0043248"},{"annotations":[116842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080129"},{"annotations":[81968,101434,117737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070682"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a mature, active proteasome complex.","definition_xrefs":["PMID:10872471","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00954":null,"SJAG_01652":null,"SJAG_02570":null,"SJAG_04197":null,"SJAG_04290":null,"SJAG_04602":null,"SJAG_04844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"proteasome assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9907900"],"synonyms":[{"name":"26S proteasome assembly","type":"narrow"},{"name":"proteasome complex assembly","type":"exact"},{"name":"proteasome maturation","type":"exact"}],"termid":"GO:0043248","terms_by_termid":{"GO:0043248":null,"GO:0070682":null,"GO:0080129":null}}


id: MONDO:0034039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic hemoglobinopathy (obsolete MONDO:0034039)","secondary_identifiers":["Orphanet:466066"],"termid":"MONDO:0034039","xrefs":{"Monarch":{"xref_id":"0034039"}}}


id: GO:0008451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.","definition_xrefs":["EC:3.4.11.9"],"gene_count":0,"genotype_count":0,"name":"obsolete X-Pro aminopeptidase activity (obsolete GO:0008451)","synonyms":[{"name":"X-Pro aminopeptidase activity","type":"exact"},{"name":"Xaa-Pro aminopeptidase activity","type":"exact"},{"name":"aminoacylproline aminopeptidase activity","type":"related"},{"name":"aminopeptidase P","type":"exact"},{"name":"proline aminopeptidase","type":"broad"}],"termid":"GO:0008451"}


id: MONDO:0017213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition in which a man develops flu-like symptoms after ejaculation (when semen is released from the penis). Specific symptoms can include extreme fatigue, weakness, feverishness or sweating, mood changes or irritability, memory or concentration problems, and/or a stuffy nose or itching eyes. Symptoms may occur within seconds, minutes, or a few hours after ejaculation. Most symptoms last for 2 to 7 days and go away on their own. The underlying cause of POIS is poorly understood. Some scientists believe it may be due to a semen allergy that causes an immediate hypersensitivity reaction. There is no standard treatment for POIS, but some men have been treated with SSRIs, antihistamines, and/or benzodiazepines. Hyposensitization therapy (decreasing the immune response by exposure to semen) reportedly improved symptoms in two men with POIS.","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postorgasmic illness syndrome","secondary_identifiers":["UMLS:C4749582","Orphanet:279947","GARD:10809","MEDGEN:1663577","icd11.foundation:1094271130"],"synonyms":[{"name":"POIS","type":"exact"},{"name":"post orgasmic sick syndrome","type":"related"}],"termid":"MONDO:0017213","xrefs":{"Monarch":{"xref_id":"0017213"}}}


id: FYPO:0007482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:27889481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000054","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis I","type":"exact"}],"termid":"FYPO:0007482"}


id: PBO:0070448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 5","termid":"PBO:0070448"}


id: MONDO:1011014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alexander disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alexander disease, non-human animal","termid":"MONDO:1010242"},{"relation_name":"is_a","term_name":"leukodystrophy, dog","termid":"MONDO:1011005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alexander disease, dog","secondary_identifiers":["OMIA:001208-9615"],"termid":"MONDO:1011014","xrefs":{"Monarch":{"xref_id":"1011014"}}}


id: PBO:0078285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 18-1","termid":"PBO:0078285"}


id: PBO:0053365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 276","termid":"PBO:0053365"}


id: MONDO:0018167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary essential cutis verticis gyrata is a rare, progressive dermis disorder characterized by thickening of the scalp resulting in redundancy of the skin which gives rise to folds and grooves that give the scalp a cerebriform appearance. Folds cannot be corrected by pressure or traction and typically are symmetric and extend anteroposteriorly from vertex to occiput and/or transversely in occipital region. Additional features may include mild subungual hyperkeratosis and distal onycholysis of the nail plates of the great toes. It is not associated with neurological and ophthalmological changes, nor with secondary causes.","definition_xrefs":["Orphanet:357220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutis verticis gyrata","termid":"MONDO:0019033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"primary essential cutis verticis gyrata","secondary_identifiers":["icd11.foundation:895947895","MEDGEN:1632625","SCTID:765135003","GARD:21537","UMLS:C4707327"],"termid":"MONDO:0018167","xrefs":{"Monarch":{"xref_id":"0018167"}}}


id: MONDO:0700132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"neurocristopathy, non-human animal","termid":"MONDO:1011337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, non-human animal","secondary_identifiers":["OMIA:002231"],"termid":"MONDO:0700132","xrefs":{"Monarch":{"xref_id":"0700132"}}}


id: PBO:0066960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 262","termid":"PBO:0066960"}


id: PBO:0034400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_sequence_feature_(obsolete_requires_sequence_feature)","termid":"PBO:0034400"}


id: SO:0002146
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 7th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:24316985","PMID:27087541","PMID:19385636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK7_acetylation_site","synonyms":[{"name":"H2A.ZK7ac","type":"exact"},{"name":"H2AZK7 acetylation site","type":"exact"},{"name":"H2AZK7ac","type":"exact"}],"termid":"SO:0002146"}


id: SO:0000305
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified nucleotide, i.e. a nucleotide other than A, T, C. G.","direct_ancestors":[{"relation_name":"is_a","term_name":"base","termid":"SO:0001236"},{"relation_name":"is_a","term_name":"epigenetically_modified_region","termid":"SO:0001720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_DNA_base","synonyms":[{"name":"INSDC_feature:modified_base","type":"exact"},{"name":"modified base site","type":"exact"}],"termid":"SO:0000305"}


id: FYPO:0001819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which phosphoribosylformylglycinamidine cyclo-ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphoribosylformylglycinamidine cyclo-ligase activity","termid":"FYPO:0001818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished phosphoribosylformylglycinamidine cyclo-ligase activity","synonyms":[{"name":"abolished AIR synthase activity","type":"exact"},{"name":"abolished AIR synthetase activity","type":"exact"},{"name":"phosphoribosylformylglycinamidine cyclo-ligase activity abolished","type":"exact"}],"termid":"FYPO:0001819"}


id: PBO:0039788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor","termid":"PBO:0039788"}


id: GO:0100053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sulfate assimilation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by transcription from RNA polymerase II promoter (obsolete GO:0100053)","termid":"GO:0100053"}


id: MONDO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic vascular disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic vascular disease (obsolete MONDO:0016517)","secondary_identifiers":["Orphanet:233655"],"synonyms":[{"name":"rare genetic vascular disease","type":"exact"}],"termid":"MONDO:0016517","xrefs":{"Monarch":{"xref_id":"0016517"}}}


id: MONDO:0035075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary early-onset glaucoma of genetic origin (obsolete MONDO:0035075)","secondary_identifiers":["Orphanet:522580"],"termid":"MONDO:0035075","xrefs":{"Monarch":{"xref_id":"0035075"}}}


id: PBO:0041928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 3","termid":"PBO:0041928"}


id: GO:0035925
data:
  {"annotated_genes":["SJAG_04824","SJAG_00391","SJAG_04825","SJAG_03476","SJAG_16457","SJAG_04682","SJAG_04880","SJAG_03696","SJAG_04818","SJAG_04084"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73210,73502,74327,76281,78503,80595,80635,81522,106886,111917],"is_not":false,"summary":null,"term":"GO:0035925"}]},"cv_name":"molecular_function","definition":"Binding to a region containing frequent adenine and uridine bases within the 3' untranslated region of a mRNA molecule or in pre-mRNA intron. The ARE-binding element consensus is UUAUUUAUU. ARE-binding proteins control the stability and/or translation of mRNAs.","definition_xrefs":["PMID:7892223","PMID:8578590","PMID:31511872","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-UTR binding","termid":"GO:0003730"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_03476":null,"SJAG_03696":null,"SJAG_04084":null,"SJAG_04682":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mRNA 3'-UTR AU-rich region binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0017091"],"synonyms":[{"name":"ARE binding","type":"related"},{"name":"AU-rich element binding","type":"related"},{"name":"adenylate/uridylate-rich element binding","type":"exact"},{"name":"mRNA 3'-UTR adenylate/uridylate-rich element binding","type":"exact"}],"termid":"GO:0035925","terms_by_termid":{"GO:0035925":null}}


id: MONDO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete crest syndrome (obsolete MONDO:0000714)","termid":"MONDO:0000714","xrefs":{"Monarch":{"xref_id":"0000714"}}}


id: GO:0097568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane bound, semi-organized microtubule array of unknown function found in Giardia species (trophozoite stage). It is located on the dorsal side of the trophozoite, slightly posterior to the ventral disc.","definition_xrefs":["GOC:giardia","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"median body","synonyms":[{"name":"parabasal body","type":"related"}],"termid":"GO:0097568"}


id: GO:0071394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to testosterone","termid":"GO:0033574"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to testosterone stimulus","termid":"GO:0071394"}


id: PBO:0086795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBL044W is not an essential protein","termid":"PBO:0086795"}


id: PBO:0045177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJA4 divergent transcript","termid":"PBO:0045177"}


id: PBO:0039678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 5 subunit zeta 1","termid":"PBO:0039678"}


id: FYPO:0002196
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121384,121184,121196],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[121354],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[121291,121285,121280,121317],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[121396,121395,121402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[121401,121400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A 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cell","type":"related"}],"termid":"FYPO:0002196","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: SO:1000017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G, or vice versa.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transversion","secondary_identifiers":["http://en.wikipedia.org/wiki/Transversion"],"termid":"SO:1000017"}


id: PBO:0065918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase subunit alpha","termid":"PBO:0065918"}


id: PBO:0087013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease MRP complex subunit; ribonuclease (RNase) MRP cleaves pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; binds to the NME1 RNA subunit of RNase MRP","termid":"PBO:0087013"}


id: MONDO:0009281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glutaryl-CoA dehydrogenase (GCDH) deficiency (GDD) is an autosomal recessive neurometabolic disorder clinically characterized by encephalopathic crises resulting in striatal injury and a severe dystonic dyskinetic movement disorder.","definition_xrefs":["Orphanet:25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutaric aciduria","termid":"MONDO:0000129"},{"relation_name":"is_a","term_name":"inborn organic aciduria","termid":"MONDO:0000688"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"glutaryl-CoA dehydrogenase deficiency","secondary_identifiers":["GARD:6522","NANDO:2200501","NCIT:C99101","ICD10CM:E72.3","MEDGEN:124337","NANDO:1200800","SCTID:76175005","DOID:0111254","MESH:C536833","OMIM:231670","UMLS:C0268595"],"synonyms":[{"name":"GA1","type":"exact"},{"name":"GCDHD","type":"exact"},{"name":"Ga 1","type":"related"},{"name":"glutaric acidemia 1","type":"related"},{"name":"glutaric acidemia I","type":"related"},{"name":"glutaric acidemia type 1","type":"exact"},{"name":"glutaric acidemia type I","type":"related"},{"name":"glutaric acidemia, type 1","type":"related"},{"name":"glutaric aciduria 1","type":"related"},{"name":"glutaric aciduria type 1","type":"exact"},{"name":"glutaric aciduria type I","type":"related"},{"name":"glutaric aciduria, type 1","type":"exact"},{"name":"glutaricaciduria, type I","type":"exact"},{"name":"glutaryl-CoA dehydrogenase deficiency","type":"exact"},{"name":"glutaryl-coenzyme A dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0009281","xrefs":{"Monarch":{"xref_id":"0009281"}}}


id: SO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ring chromosome is a chromosome whose arms have fused together to form a ring in an inverted fashion, often with the loss of the ends of the chromosome.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"},{"relation_name":"is_a","term_name":"ring_chromosome","termid":"SO:1000045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_ring_chromosome","synonyms":[{"name":"inverted ring chromosome","type":"exact"}],"termid":"SO:0000439"}


id: PBO:0059089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 2","termid":"PBO:0059089"}


id: FYPO:0000925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosomes are not segregated equally to the two spindle poles in a meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"unequal meiotic chromosome segregation","synonyms":[{"name":"abnormal meiotic chromosome disjunction","type":"exact"},{"name":"chromosome non-disjunction at meiosis","type":"related"},{"name":"meiotic chromosome nondisjunction","type":"related"}],"termid":"FYPO:0000925"}


id: PBO:0080555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1 pseudogene 2","termid":"PBO:0080555"}


id: MONDO:1010569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, horse","secondary_identifiers":["OMIA:000278-9796"],"termid":"MONDO:1010569","xrefs":{"Monarch":{"xref_id":"1010569"}}}


id: PBO:0056742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meteorin like, glial cell differentiation regulator","termid":"PBO:0056742"}


id: PBO:0001926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup98 and Nup96","termid":"PBO:0001926"}


id: GO:0070778
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98509],"is_not":false,"summary":null,"term":"GO:0070778"}]},"cv_name":"biological_process","definition":"The directed movement of L-aspartate across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-aspartate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0089712"],"synonyms":[{"name":"L-aspartate transport","type":"broad"}],"termid":"GO:0070778","terms_by_termid":{"GO:0070778":null}}


id: PBO:0041152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 7","termid":"PBO:0041152"}


id: PBO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWm associated Phd1","termid":"PBO:0000775"}


id: GO:0021686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar granular layer to attain its fully functional state. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellar granular layer development","termid":"GO:0021681"},{"relation_name":"part_of","term_name":"cerebellar cortex maturation","termid":"GO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer maturation","termid":"GO:0021686"}


id: PBO:0027439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_protein_level","termid":"PBO:0027439"}


id: PBO:0039830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-fifty homeobox pseudogene 1","termid":"PBO:0039830"}


id: PR:Q9US36
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klf1 gene.","definition_xrefs":["UniProtKB:Q9US36","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein klf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.05c","synonyms":[{"name":"Spom972h-klf1","type":"exact"},{"name":"krueppel-like zinc finger transcription factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US36"}


id: GO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"RNA polymerase V is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol V is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase IVa, while the largest subunit is found only in the IVa complex and contains an extended C-terminal domain (CTD) that includes multiple repeats of a 16 amino-acid consensus sequence as well as other sequences. The remainder of the complex is composed of smaller subunits.","definition_xrefs":["PMID:16140984","GOC:mtg_sensu","GOC:krc","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase V complex","secondary_identifiers":["GO:0080137"],"synonyms":[{"name":"DNA-directed RNA polymerase IVb complex","type":"exact"},{"name":"DNA-directed RNA polymerase V complex","type":"exact"}],"termid":"GO:0000419"}


id: PBO:0088745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc chaperone Zng1","termid":"PBO:0088745"}


id: PBO:0041826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0041826"}


id: PBO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tert-butyl_hydroperoxide","termid":"PBO:0030378"}


id: MONDO:0859159
data:
  {"annotated_genes":["SJAG_01544"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88468],"is_not":false,"summary":null,"term":"MONDO:0859159"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01544":null},"genotype_count":0,"is_obsolete":false,"name":"deafness, cataract, impaired intellectual development, and polyneuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619354","MEDGEN:1781637","UMLS:C5543482"],"termid":"MONDO:0859159","terms_by_termid":{"MONDO:0859159":null},"xrefs":{"Monarch":{"xref_id":"0859159"}}}


id: PBO:0074820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18C","termid":"PBO:0074820"}


id: PBO:0066469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C 5 pseudogene 1","termid":"PBO:0066469"}


id: PBO:0077804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 2","termid":"PBO:0077804"}


id: PR:Q1MTR3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.14c gene.","definition_xrefs":["UniProtKB:Q1MTR3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar import and degradation protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.14c","synonyms":[{"name":"Spom972h-SPBC1685.14c","type":"exact"}],"termid":"PR:Q1MTR3"}


id: GO:0097199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to the apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","PMID:11717445","Wikipedia:Caspase"],"gene_count":0,"genotype_count":0,"name":"obsolete cysteine-type endopeptidase activity involved in apoptotic signaling pathway (obsolete GO:0097199)","synonyms":[{"name":"activator caspase activity","type":"narrow"},{"name":"apical caspase activity","type":"narrow"},{"name":"cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"initiator caspase activity","type":"narrow"}],"termid":"GO:0097199"}


id: PBO:0068187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 494","termid":"PBO:0068187"}


id: GO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"bicarbonate transport","secondary_identifiers":["Reactome:R-HSA-425381","Reactome:R-HSA-1480926","Reactome:R-HSA-1475029"],"synonyms":[{"name":"hydrogencarbonate transport","type":"exact"}],"termid":"GO:0015701"}


id: MONDO:0001933
data:
  {"annotated_genes":["SJAG_02426","SJAG_04394","SJAG_04334","SJAG_00214","SJAG_02012","SJAG_04495","SJAG_02000","SJAG_02013","SJAG_03247","SJAG_00092","SJAG_04206","SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89292,89293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014488"},{"annotations":[88412,88411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[88748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[89214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[87056,87057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[88331,88332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[89217,89216,87055,87053,89218,87051,87052,87054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005148"}]},"cv_name":"mondo","definition":"A disease involving the endocrine pancreas.","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00214":null,"SJAG_02000":null,"SJAG_02012":null,"SJAG_02013":null,"SJAG_02426":null,"SJAG_03247":null,"SJAG_03266":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"endocrine pancreas disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:124407","ICD9:251","SCTID:17346000","UMLS:C0271633","NCIT:C27067","DOID:1428"],"synonyms":[{"name":"disease of endocrine pancreas","type":"exact"},{"name":"disease or disorder of endocrine pancreas","type":"exact"},{"name":"disorder of endocrine pancreas","type":"exact"},{"name":"disorder of islets of langerhans","type":"related"},{"name":"disorder of pancreatic islets","type":"related"},{"name":"endocrine pancreas disease","type":"exact"},{"name":"endocrine pancreas disease or disorder","type":"exact"},{"name":"endocrine pancreas disorder","type":"exact"}],"termid":"MONDO:0001933","terms_by_termid":{"MONDO:0005148":null,"MONDO:0007453":null,"MONDO:0011236":null,"MONDO:0011717":null,"MONDO:0014488":null,"MONDO:0014674":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0001933"}}}


id: PATO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being arranged like rays or radii; radiating from a common center.","definition_xrefs":["PATOC:me"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"star shaped","synonyms":[{"name":"stellate","type":"exact"}],"termid":"PATO:0002065"}


id: FYPO:0005690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) assembly is abnormal. eMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["PomBase:mah","GO:1904185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal eMTOC assembly","synonyms":[{"name":"abnormal eMTOC assembly during mitotic cell cycle","type":"related"},{"name":"abnormal eMTOC assembly during vegetative growth","type":"exact"},{"name":"abnormal eMTOC formation","type":"exact"},{"name":"abnormal equatorial microtubule organizing center assembly","type":"exact"},{"name":"abnormal equatorial microtubule organizing center formation","type":"exact"}],"termid":"FYPO:0005690"}


id: GO:0033983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2,4-diaminobutyrate + H+ = 1,3-diaminopropane + CO2.","definition_xrefs":["EC:4.1.1.86","RHEA:15689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"diaminobutyrate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R07650","MetaCyc:4.1.1.86-RXN"],"synonyms":[{"name":"DABA DC","type":"related"},{"name":"L-2,4-diaminobutanoate carboxy-lyase (propane-1,3-diamine-forming) activity","type":"related"},{"name":"L-2,4-diaminobutanoate carboxy-lyase activity","type":"related"},{"name":"L-2,4-diaminobutyrate decarboxylase activity","type":"related"}],"termid":"GO:0033983"}


id: PR:P10989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- act1 gene.","definition_xrefs":["UniProtKB:P10989","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.12c","synonyms":[{"name":"Spom972h-act1","type":"exact"}],"termid":"PR:P10989"}


id: MONDO:0013920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian susceptibility or predisposition to herpes simplex infection induced encephalitis in which the cause of the diseas is a mutation in the TRAF3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, acute, infection-induced","termid":"MONDO:0000166"},{"relation_name":"excluded_subClassOf","term_name":"herpes simplex encephalitis","termid":"MONDO:0012521"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex encephalitis, susceptibility to, 3","secondary_identifiers":["OMIM:614849","DOID:0061101","MEDGEN:766782","UMLS:C3553868"],"synonyms":[{"name":"Herpes simplex encephalitis, susceptibility to, type 3","type":"exact"},{"name":"IIAE5","type":"related"},{"name":"TRAF3 herpes simplex encephalitis","type":"exact"},{"name":"encephalopathy, acute, infection-induced (HERPES-specific), susceptibility to, 5","type":"related"},{"name":"encephalopathy, acute, infection-induced (Herpes-specific), susceptibility to, 5","type":"related"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, 5","type":"related"},{"name":"herpes simplex encephalitis caused by mutation in TRAF3","type":"exact"},{"name":"herpes simplex encephalitis, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0013920","xrefs":{"Monarch":{"xref_id":"0013920"}}}


id: PBO:0113747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHC pseudogene 3","termid":"PBO:0113747"}


id: GO:1902492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sperm capacitation.","definition_xrefs":["GOC:hjd","PMID:22539676","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of sperm capacitation","termid":"GO:1902490"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"sperm capacitation","termid":"GO:0048240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sperm capacitation","synonyms":[{"name":"activation of sperm activation","type":"related"},{"name":"activation of sperm capacitation","type":"narrow"},{"name":"positive regulation of sperm activation","type":"related"},{"name":"up regulation of sperm activation","type":"related"},{"name":"up regulation of sperm capacitation","type":"exact"},{"name":"up-regulation of sperm activation","type":"related"},{"name":"up-regulation of sperm capacitation","type":"exact"},{"name":"upregulation of sperm activation","type":"related"},{"name":"upregulation of sperm capacitation","type":"exact"}],"termid":"GO:1902492"}


id: MONDO:0044649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005267"],"is_obsolete":false,"name":"omphalocele-diaphragmatic hernia-cardiovascular anomalies-radial ray defect syndrome","secondary_identifiers":["Orphanet:496693","GARD:10354"],"synonyms":[{"name":"Gershoni-Baruch syndrome","type":"exact"}],"termid":"MONDO:0044649","xrefs":{"Monarch":{"xref_id":"0044649"}}}


id: GO:0052660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-propane-1,2-diol + NAD+ = (R)-lactaldehyde + NADH + H+.","definition_xrefs":["RHEA:23872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactaldehyde reductase activity","termid":"GO:0008912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"R-lactaldehyde reductase activity","secondary_identifiers":["MetaCyc:RXN-8641","KEGG_REACTION:R03080"],"synonyms":[{"name":"(R)-propane-1,2-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"D-lactaldehyde:propanediol oxidoreductase activity","type":"related"}],"termid":"GO:0052660"}


id: FYPO:0004644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004644"}


id: PBO:0018288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho7 (predicted)","termid":"PBO:0018288"}


id: PBO:0030895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_phenotype_during_vegetative_growth","termid":"PBO:0030895"}


id: PBO:0084989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent aldehyde reductase; utilizes aromatic and alophatic aldehyde substrates; member of the short-chain dehydrogenase/reductase superfamily","termid":"PBO:0084989"}


id: PBO:0055471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2904","termid":"PBO:0055471"}


id: GO:1900259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of RNA-directed 5'-3' RNA polymerase activity.","definition_xrefs":["GOC:TermGenie","GOC:pf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of RNA-dependent RNA polymerase activity (obsolete GO:1900259)","synonyms":[{"name":"regulation of 3D polymerase activity","type":"exact"},{"name":"regulation of Q-beta replicase activity","type":"exact"},{"name":"regulation of RDRP","type":"related"},{"name":"regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"regulation of RNA replicase activity","type":"exact"},{"name":"regulation of RNA synthetase activity","type":"related"},{"name":"regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"regulation of RNA-directed 5'-3' RNA polymerase activity","type":"exact"},{"name":"regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"regulation of ribonucleic replicase activity","type":"exact"},{"name":"regulation of ribonucleic synthetase activity","type":"related"},{"name":"regulation of transcriptase","type":"broad"}],"termid":"GO:1900259"}


id: PBO:0031060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mixed_population_(obsolete_FYPO:0000317)","termid":"PBO:0031060"}


id: PBO:0089191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted GTPase with a role in RNA polymerase localization","termid":"PBO:0089191"}


id: PR:O74474
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.15","synonyms":[{"name":"Spom972h-wtf21","type":"exact"}],"termid":"PR:O74474"}


id: MONDO:0017089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A megalencephaly (disease) that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated megalencephaly","secondary_identifiers":["GARD:20977","Orphanet:268920"],"synonyms":[{"name":"isolated macrencephaly","type":"exact"},{"name":"isolated megalencephaly (disease)","type":"exact"},{"name":"nonsyndromic megalencephaly (disease)","type":"exact"}],"termid":"MONDO:0017089","xrefs":{"Monarch":{"xref_id":"0017089"}}}


id: GO:0030098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized precursor cell acquires specialized features of a lymphocyte. A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.","definition_xrefs":["CL:0000542","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"},{"relation_name":"is_a","term_name":"mononuclear cell differentiation","termid":"GO:1903131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte differentiation","secondary_identifiers":["GO:0046650"],"synonyms":[{"name":"lymphocyte cell differentiation","type":"exact"},{"name":"lymphocyte development","type":"related"},{"name":"lymphocytic blood cell differentiation","type":"exact"}],"termid":"GO:0030098"}


id: PBO:0056612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ME3 divergent transcript","termid":"PBO:0056612"}


id: PBO:0063759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 1","termid":"PBO:0063759"}


id: FYPO:0001894
data:
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id: PBO:0001506
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id: PBO:0051956
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id: PBO:0063625
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id: PBO:0120068
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id: PBO:0087340
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id: MONDO:0957278
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id: GO:1905651
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id: PBO:0074407
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id: MONDO:0005027
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id: PBO:0027279
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id: GO:0097250
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id: GO:0047679
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id: PBO:0068534
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id: MONDO:0015139
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id: GO:0030756
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id: MOD:01125
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id: PBO:0046876
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id: MONDO:0060496
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id: PBO:0053313
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id: PBO:0114321
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id: PBO:0045935
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id: PBO:0074416
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id: GO:0000112
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id: GO:0046938
data:
  {"annotated_genes":["SJAG_01351","SJAG_00988","SJAG_04516","SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72744,95257,98963,110409],"is_not":false,"summary":null,"term":"GO:0046938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phytochelatin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cadystin biosynthetic process","type":"related"},{"name":"phytochelatin anabolism","type":"exact"},{"name":"phytochelatin biosynthesis","type":"exact"},{"name":"phytochelatin formation","type":"exact"},{"name":"phytochelatin synthesis","type":"exact"}],"termid":"GO:0046938","terms_by_termid":{"GO:0046938":null}}


id: GO:0005706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thread-like connection joining two regions of ectopically paired polytene chromosomes.","definition_xrefs":["ISBN:0120649012","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"polytene chromosome ectopic fiber","synonyms":[{"name":"polytene chromosome ectopic fibre","type":"exact"}],"termid":"GO:0005706"}


id: PBO:0091132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial LYR family protein","termid":"PBO:0091132"}


id: GO:0016626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an acceptor other than NAD, NADP, oxygen, an iron-sulfur protein, disulphide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors (obsolete GO:0016626)","synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"exact"}],"termid":"GO:0016626"}


id: PATO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"permeability","termid":"PATO:0000970"}


id: MONDO:0010325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Stocco dos Santos type","secondary_identifiers":["OMIM:300434","UMLS:C1845530","MEDGEN:335202","DOID:0112126","MESH:C537495","Orphanet:85288","SCTID:718910006","GARD:1133"],"synonyms":[{"name":"SDSX","type":"related"},{"name":"Sdsx","type":"related"},{"name":"Stocco DOS Santos X-linked intellectual disability syndrome","type":"related"},{"name":"Stocco DOS Santos X-linked mental retardation syndrome","type":"related"},{"name":"Stocco dos Santos syndrome","type":"related"},{"name":"intellectual developmental disorder, X-linked syndromic, Stocco dos Santos type","type":"exact"},{"name":"intellectual disability, Stocco dos Santos type","type":"related"},{"name":"intellectual disability, X-linked, Stocco Dos Santos type","type":"related"},{"name":"mental retardation, Stocco dos Santos type","type":"related"},{"name":"mental retardation, X-linked, Stocco Dos Santos type","type":"related"}],"termid":"MONDO:0010325","xrefs":{"Monarch":{"xref_id":"0010325"}}}


id: GO:0062191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the exopolysaccharide galactoxylomannan. Galactoxylomannan is produced by a pathogenic fungus and causes paralysis in some animals.","definition_xrefs":["PMID:19684080","PMID:21843086","PMID:16441437","PMID:18952901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide biosynthetic process","termid":"GO:0051278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"galactoxylomannan biosynthetic process","synonyms":[{"name":"GalXM biosynthetic process","type":"exact"},{"name":"galactoxylomannan anabolism","type":"exact"},{"name":"galactoxylomannan biosynthesis","type":"exact"},{"name":"galactoxylomannan formation","type":"exact"},{"name":"galactoxylomannan synthesis","type":"exact"},{"name":"glucuronoxylomannogalactan biosynthetic process","type":"exact"}],"termid":"GO:0062191"}


id: FYPO:0007980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain interphase microtubule bundles with microtubule overlaps longer than normal.","definition_xrefs":["PomBase:mlr","PMID:15837798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"Increased microtubule overlap length in bundles during mitotic interphase:","termid":"FYPO:0007980"}


id: PBO:0072033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 3","termid":"PBO:0072033"}


id: PBO:0047263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member F","termid":"PBO:0047263"}


id: PBO:0073321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 4","termid":"PBO:0073321"}


id: PBO:0004076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga5","termid":"PBO:0004076"}


id: PBO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Chp1","termid":"PBO:0000050"}


id: PBO:0049439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 16","termid":"PBO:0049439"}


id: PBO:0047861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(2)(q11.2)","termid":"PBO:0047861"}


id: PBO:0048651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 2","termid":"PBO:0048651"}


id: PBO:0074673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 58B","termid":"PBO:0074673"}


id: MONDO:0015369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome (JS) and related disorders (JSRD) are a group of developmental delay/multiple congenital anomaly syndromes in which the mandatory feature is the \\\"molar tooth sign'' (MTS), a complex midbrain-hindbrain malformation recognizable on brain imaging. The MTS is characterized by cerebellar vermis hypodysplasia, thickening and malorientation of the superior cerebellar peduncles and abnormally deep interpeduncular fossa.","definition_xrefs":["Orphanet:140874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital cerebellar ataxia","termid":"MONDO:0020043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"Joubert syndrome and related disorders","secondary_identifiers":["UMLS:C5679612","NANDO:1200661","NANDO:2100218","GARD:19931","NANDO:2200824","MEDGEN:1826007"],"synonyms":[{"name":"JSRD","type":"exact"},{"name":"Joubert syndrome and related disorders","type":"exact"}],"termid":"MONDO:0015369","xrefs":{"Monarch":{"xref_id":"0015369"}}}


id: PBO:0042231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 3 (pseudogene)","termid":"PBO:0042231"}


id: PR:O59827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A disulfide-bond oxidoreductase YfcG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.07c","secondary_identifiers":["UniProtKB:O59827"],"synonyms":[{"name":"GST-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-yfcG","type":"exact"}],"termid":"PR:O59827"}


id: PBO:0048619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylated integral membrane protein 1","termid":"PBO:0048619"}


id: PBO:0081158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, FOG family member 2","termid":"PBO:0081158"}


id: GO:0008774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde + CoA + NAD+ = acetyl-CoA + NADH + H+.","definition_xrefs":["EC:1.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acetaldehyde dehydrogenase (acetylating) activity","secondary_identifiers":["MetaCyc:ACETALD-DEHYDROG-RXN","RHEA:23288"],"synonyms":[{"name":"ADA","type":"related"},{"name":"DmpF","type":"related"},{"name":"acetaldehyde:NAD+ oxidoreductase (CoA-acetylating)","type":"related"},{"name":"acylating acetaldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (acylating) activity","type":"related"}],"termid":"GO:0008774"}


id: MONDO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant tumor involving the lymph node. Lymphomas and metastatic carcinomas are representative examples. -- 2004","definition_xrefs":["NCIT:C35812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system cancer","termid":"MONDO:0000612"},{"relation_name":"is_a","term_name":"lymph node neoplasm","termid":"MONDO:0024339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"lymph node cancer","secondary_identifiers":["SCTID:127232002","UMLS:C0948627","ICD9:239.89","MEDGEN:182690","DOID:10619"],"synonyms":[{"name":"cancer of lymph node","type":"exact"},{"name":"lymph node cancer","type":"exact"},{"name":"lymph node neoplasm","type":"broad"},{"name":"malignant lymph node neoplasm","type":"exact"},{"name":"malignant neoplasm of lymph node","type":"exact"}],"termid":"MONDO:0001082","xrefs":{"Monarch":{"xref_id":"0001082"}}}


id: PBO:0084744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial isoleucyl-tRNA synthetase; null mutant is deficient in respiratory growth; human homolog IARS2 implicated in mitochondrial diseases, can partially complement yeast null mutant","termid":"PBO:0084744"}


id: GO:0003024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a decrease in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of decreased arterial stretch","termid":"GO:0003024"}


id: GO:0035863
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100940],"is_not":false,"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dITP, a deoxyinosine phosphate compound having a triphosphate group at the 5'-position.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009217"},{"relation_name":"is_a","term_name":"dITP metabolic process","termid":"GO:0035862"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dITP catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2'-Deoxyinosine 5'-triphosphate catabolic process","type":"exact"},{"name":"2'-Deoxyinosine-5'-triphosphate catabolic process","type":"exact"},{"name":"dITP breakdown","type":"exact"},{"name":"dITP catabolism","type":"exact"},{"name":"dITP degradation","type":"exact"},{"name":"deoxyinosine 5'-triphosphate catabolic process","type":"exact"},{"name":"deoxyinosine triphosphate (2'-deoxyinosine 5'-triphosphate) catabolic process","type":"exact"}],"termid":"GO:0035863","terms_by_termid":{"GO:0035863":null}}


id: PBO:0039399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 4","termid":"PBO:0039399"}


id: PBO:0091704
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human U2AF2","termid":"PBO:0091704"}


id: PBO:0038569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein family member 3","termid":"PBO:0038569"}


id: GO:0004301
data:
  {"annotated_genes":["SJAG_01088"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77684],"is_not":false,"summary":null,"term":"GO:0004301"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an epoxide + H2O = an ethanediol.","definition_xrefs":["EC:3.3.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"epoxide hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2161961","Reactome:R-HSA-9026000","Reactome:R-HSA-9020258","Reactome:R-HSA-9020270","Reactome:R-HSA-9020253","Reactome:R-HSA-9024973","Reactome:R-HSA-9915968","Reactome:R-HSA-9026008","Reactome:R-HSA-9025998","Reactome:R-HSA-9024890","Reactome:R-HSA-9915986","RHEA:19037","MetaCyc:3.3.2.10-RXN","Reactome:R-HSA-9020252","Reactome:R-HSA-9018862","Reactome:R-HSA-9018877","Reactome:R-HSA-9020257","Reactome:R-HSA-9024993","Reactome:R-HSA-9915994"],"synonyms":[{"name":"arene-oxide hydratase activity","type":"broad"},{"name":"aryl epoxide hydrase activity","type":"broad"},{"name":"cytosolic epoxide hydrolase activity","type":"related"},{"name":"epoxide hydrase activity","type":"broad"},{"name":"epoxide hydratase activity","type":"broad"},{"name":"sEH","type":"related"},{"name":"soluble epoxide hydrolase activity","type":"narrow"},{"name":"trans-stilbene oxide hydrolase activity","type":"related"}],"termid":"GO:0004301","terms_by_termid":{"GO:0004301":null}}


id: SO:1001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon signal for a UAA stop codon redefinition.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_signal","termid":"SO:1001288"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAA_stop_codon_signal","synonyms":[{"name":"UAA stop codon signal","type":"exact"}],"termid":"SO:1001283"}


id: PBO:0077709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin T2, cardiac type","termid":"PBO:0077709"}


id: PBO:0045444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase","termid":"PBO:0045444"}


id: MONDO:0008561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thumb deformity","secondary_identifiers":["MESH:C536903","UMLS:C0575897","OMIM:188100","HP:0001172","MEDGEN:107901"],"synonyms":[{"name":"thumb absent or hypoplastic","type":"related"},{"name":"thumb deformity","type":"exact"},{"name":"thumb deformity (disease)","type":"exact"},{"name":"thumb hypoplastic","type":"related"}],"termid":"MONDO:0008561","xrefs":{"Monarch":{"xref_id":"0008561"}}}


id: PBO:0067263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 337, pseudogene","termid":"PBO:0067263"}


id: GO:0043785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-phenyllactate + [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonatooxy)oxolan-2-yl]methyl {[(3R)-3-hydroxy-2,2-dimethyl-3-({2-[(2-{[(2E)-3-phenylprop-2-enoyl]sulfanyl}ethyl)carbamoyl]ethyl}carbamoyl)propyl phosphonato]oxy}phosphonate = (R)-3-phenyllactoyl-CoA + trans-cinnamate.","definition_xrefs":["EC:2.8.3.17","RHEA:15601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cinnamoyl-CoA:phenyllactate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.17-RXN","KEGG_REACTION:R07796"],"synonyms":[{"name":"(E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase activity","type":"exact"},{"name":"FldA","type":"related"}],"termid":"GO:0043785"}


id: PBO:0088516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit a","termid":"PBO:0088516"}


id: MONDO:0010666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Miles-Carpenter syndrome (obsolete MONDO:0010666)","secondary_identifiers":["OMIM:309605"],"termid":"MONDO:0010666","xrefs":{"Monarch":{"xref_id":"0010666"}}}


id: FYPO:0001240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide, also known as diamide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on diamide","synonyms":[{"name":"normal cell population growth in presence of diamide","type":"exact"},{"name":"normal cell population growth on N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"},{"name":"normal cell population growth on diamide","type":"exact"},{"name":"normal cellular response to diamide","type":"related"},{"name":"normal vegetative cell population growth on diamide","type":"exact"}],"termid":"FYPO:0001240"}


id: PBO:0075609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speckle type BTB/POZ protein","termid":"PBO:0075609"}


id: PBO:0086208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with the large mitoribosomal subunit; abundance and relative nuclear distribution to the protein increases upon DNA replication stress; YDR132C has a paralog, YLR108C, that arose from the whole genome duplication","termid":"PBO:0086208"}


id: FYPO:0007361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of an ATPase activity does not occur.","definition_xrefs":["PMID:32204793","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished positive regulation of ATPase activity","synonyms":[{"name":"abolished activation of ATPase activity","type":"narrow"},{"name":"abolished positive regulation of ATPase activity during mitotic cell cycle","type":"related"},{"name":"abolished positive regulation of ATPase activity during vegetative growth","type":"exact"},{"name":"positive regulation of ATPase activity abolished","type":"exact"}],"termid":"FYPO:0007361"}


id: GO:0007307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Amplification by up to 60-fold of the loci containing the chorion gene clusters. Amplification is necessary for the rapid synthesis of chorion proteins by the follicle cells, and occurs by repeated firing of one or more origins located within each gene cluster.","definition_xrefs":["GOC:mtg_sensu","PMID:11157771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA amplification","termid":"GO:0006277"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006259"],"is_obsolete":false,"name":"eggshell chorion gene amplification","termid":"GO:0007307"}


id: PBO:0072892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suprabasin","termid":"PBO:0072892"}


id: PBO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_physical_quality_phenotype_during_vegetative_growth","termid":"PBO:0030911"}


id: GO:0120224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a larynx from an initial condition to its mature state. This process begins with the formation of the larynx and ends with the mature structure. A larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration.","definition_xrefs":["PMID:28177282","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larynx development","termid":"GO:0120224"}


id: MONDO:0035534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive microcephalic primordial dwarfism characterized by congenital microcephaly and craniofacial features associated with a spectrum of limb abnormalities ranging from mild to severe. Short stature is frequently observed and often is severe.","definition_xrefs":["Orphanet:572761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DONSON-related microcephaly-short stature-limb abnormalities spectrum","secondary_identifiers":["GARD:22314","MEDGEN:1814482","UMLS:C5681722"],"termid":"MONDO:0035534","xrefs":{"Monarch":{"xref_id":"0035534"}}}


id: PBO:0091991
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Papulacandin B Resistance","termid":"PBO:0091991"}


id: PBO:0012842
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Renal cell cancer","termid":"PBO:0012842"}


id: MONDO:0020758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0020758 (obsolete MONDO:0020758)","termid":"MONDO:0020758","xrefs":{"Monarch":{"xref_id":"0020758"}}}


id: MONDO:0005378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuromyelitis optica (obsolete MONDO:0005378)","termid":"MONDO:0005378","xrefs":{"Monarch":{"xref_id":"0005378"}}}


id: PR:Q09190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytidine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11644:SF2","PRO:DNx","OMA:SCHPO01569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.04c","secondary_identifiers":["UniProtKB:Q09190"],"synonyms":[{"name":"CDA (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDA","type":"exact"},{"name":"cytidine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09190"}


id: PBO:0058318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4691","termid":"PBO:0058318"}


id: PBO:0112976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein, major isoform; involved in post-transcriptional control of the proteome; binds to both proteins and to DNA, including replication origins; regulates exocytosis, vesicle transport, Ras/MAPK and rapamycin-sensitive signaling, aggresome formation, the spindle position checkpoint and meiotic commitment; protein abundance and relative distribution to the nucleus increase upon DNA replication stress; antiapoptotic gene; similar to several human 14-3-3 proteins","termid":"PBO:0112976"}


id: GO:0035122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the medial fin are generated and organized. Medial fins are unpaired fins of fish, usually located dorsomedially or ventromedially and primarily used for stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"},{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic medial fin morphogenesis","synonyms":[{"name":"embryonic unpaired fin morphogenesis","type":"exact"}],"termid":"GO:0035122"}


id: MOD:00276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, a lysine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["RESID:AA0271","PubMed:9237682","PubMed:12709052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-lysine","synonyms":[{"name":"(19S,20S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-20-([(S)-5-amino-5-carboxypentyl]amino)-3,8,13,17-tetramethyl-21H,23H-19,20-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-N6-lysino-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-lysine","type":"exact"}],"termid":"MOD:00276"}


id: PBO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis specific Coiled-coil Protein","termid":"PBO:0000472"}


id: PBO:0077015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin 3","termid":"PBO:0077015"}


id: FYPO:0004814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at highly transcribed protein-coding genes is abnormal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription at highly transcribed protein-coding genes","synonyms":[{"name":"abnormal RNA polymerase II release at highly transcribed protein-coding genes","type":"related"},{"name":"abnormal RNA polymerase II transcription termination at highly transcribed protein-coding genes","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at highly transcribed protein-coding genes during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription at highly transcribed protein-coding genes during vegetative growth","type":"exact"}],"termid":"FYPO:0004814"}


id: GO:0045041
data:
  {"annotated_genes":["SJAG_00564","SJAG_00196","SJAG_01560","SJAG_01647"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78961,79583],"is_not":false,"summary":null,"term":"GO:0045041"},{"annotations":[100440,99080],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"}]},"cv_name":"biological_process","definition":"The import of proteins into the space between the inner and outer mitochondrial membranes.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitochondrion","termid":"GO:0070585"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00564":null,"SJAG_01560":null,"SJAG_01647":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein import into mitochondrial intermembrane space","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0045044","GO:0045043"],"synonyms":[{"name":"mitochondrial intermembrane space protein import","type":"exact"},{"name":"protein import into mitochondrial IMS","type":"exact"},{"name":"protein import into mitochondrial intermembrane space, direct","type":"narrow"},{"name":"protein import into mitochondrial intermembrane space, nonconservative","type":"narrow"},{"name":"protein transport into mitochondrial IMS","type":"exact"},{"name":"protein transport into mitochondrial intermembrane space","type":"exact"}],"termid":"GO:0045041","terms_by_termid":{"GO:0045041":null,"GO:0160203":null}}


id: GO:0018719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-aminohexanoate + alpha-ketoglutarate = glutamate + 6-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r0449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"6-aminohexanoate transaminase activity","secondary_identifiers":["MetaCyc:R562-RXN"],"termid":"GO:0018719"}


id: FYPO:0005071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"},{"relation_name":"is_a","term_name":"increased chromatin silencing","termid":"FYPO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased chromatin silencing at centromere","synonyms":[{"name":"increased chromatin silencing at centromere during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at centromere during vegetative growth","type":"exact"},{"name":"increased heterochromatin silencing at centromere","type":"related"}],"termid":"FYPO:0005071"}


id: PBO:0090703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal membrane protein","termid":"PBO:0090703"}


id: GO:0033117
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle filled with crystalline protein that shows sequence similarities with various esterases.","definition_xrefs":["PMID:2307702","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"esterosome","termid":"GO:0033117"}


id: MONDO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly","secondary_identifiers":["MEDGEN:1808159","UMLS:C5676961","OMIM:619827","DOID:0081234"],"synonyms":[{"name":"MRT75","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly","type":"exact"}],"termid":"MONDO:0030785","xrefs":{"Monarch":{"xref_id":"0030785"}}}


id: MOD:01220
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:286#E","PubMed:15121203","PubMed:9254591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), heavy C13","termid":"MOD:00606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13 - site E","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:01220"}


id: PBO:0089057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine diphosphorylase Uap1/Qri1","termid":"PBO:0089057"}


id: GO:1900508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur-molybdenum cofactor assembly","termid":"GO:1900506"},{"relation_name":"is_a","term_name":"positive regulation of iron-sulfur cluster assembly","termid":"GO:1903331"},{"relation_name":"positively_regulates","term_name":"iron-sulfur-molybdenum cofactor assembly","termid":"GO:0044593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016226"],"is_obsolete":false,"name":"positive regulation of iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"activation of FeMoco assembly","type":"exact"},{"name":"activation of FeMoco biosynthetic process","type":"exact"},{"name":"activation of iron molybdenum cofactor assembly","type":"exact"},{"name":"activation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"activation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"activation of iron-sulfur-molybdenum cofactor assembly","type":"narrow"},{"name":"positive regulation of FeMoco assembly","type":"exact"},{"name":"positive regulation of FeMoco biosynthetic process","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up regulation of FeMoco assembly","type":"exact"},{"name":"up regulation of FeMoco biosynthetic process","type":"exact"},{"name":"up regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"up regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"up regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up regulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"up-regulation of FeMoco assembly","type":"exact"},{"name":"up-regulation of FeMoco biosynthetic process","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up-regulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"upregulation of FeMoco assembly","type":"exact"},{"name":"upregulation of FeMoco biosynthetic process","type":"exact"},{"name":"upregulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"upregulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"upregulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"upregulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"}],"termid":"GO:1900508"}


id: PBO:0076142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 1","termid":"PBO:0076142"}


id: GO:1903415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of flavonoid from endoplasmic reticulum to plant-type vacuole.","definition_xrefs":["GOC:tb","GO_REF:0000078","GOC:TermGenie","PMID:25116949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"flavonoid transport from endoplasmic reticulum to plant-type vacuole","synonyms":[{"name":"flavonoid accumulation in vacuole","type":"related"}],"termid":"GO:1903415"}


id: PBO:0034605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2_DNA_damage_checkpoint_during_cellular_response_to_UV_during_mitotic_S_phase","termid":"PBO:0034605"}


id: MONDO:0011243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Grange syndrome is characterized by stenosis or occlusion of multiple arteries (including the renal, cerebral and abdominal vessels), hypertension, brachysyndactyly, syndactyly, increased bone fragility, and learning difficulties or borderline intellectual deficit. Congenital heart defects were also reported in some cases.","definition_xrefs":["Orphanet:79094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grange syndrome","secondary_identifiers":["GARD:16697","MESH:C566529","SCTID:717824007","OMIM:602531","icd11.foundation:729368905","UMLS:C1865267","MEDGEN:355427"],"synonyms":[{"name":"GRNG","type":"related"},{"name":"arterial occlusive disease, progressive, with hypertension, heart defects, bone fragility, and brachysyndactyly","type":"related"},{"name":"grange occlusive arterial syndrome","type":"exact"},{"name":"grange syndrome","type":"exact"},{"name":"progressive arterial occlusive disease-hypertension-heart defects-bone fragility-brachysyndactyly syndrome","type":"exact"}],"termid":"MONDO:0011243","xrefs":{"Monarch":{"xref_id":"0011243"}}}


id: GO:0070887
data:
  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id: PBO:0111770
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id: PR:O74770
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id: PBO:0052369
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id: GO:0035443
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id: MONDO:1011774
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id: PBO:0086858
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id: MONDO:0033363
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id: GO:0043293
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id: GO:0015714
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id: PBO:0090011
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id: PATO:0001782
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id: PBO:0072971
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id: SO:0002358
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id: PBO:0068321
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id: MONDO:0005240
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id: PBO:0089625
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit A Taf12","termid":"PBO:0089625"}


id: MONDO:0035450
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprosencephaly","secondary_identifiers":["GARD:22281","NCIT:C98824","icd11.foundation:1740361952","MEDGEN:140908","UMLS:C0431349","Orphanet:566857"],"termid":"MONDO:0035450","xrefs":{"Monarch":{"xref_id":"0035450"}}}


id: MONDO:1012645
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephritis that occurs in male dogs due to a mutation in the COL4A5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis, dog","termid":"MONDO:1011045"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephritis, COL4A5-related, dog","secondary_identifiers":["OMIA:001112-9615"],"synonyms":[{"name":"Alport syndrome, dog","type":"related"},{"name":"X-linked hereditary nephropathy, dog","type":"related"},{"name":"X-linked nephritis, dog","type":"related"},{"name":"glomerulonephritis, dog","type":"related"}],"termid":"MONDO:1012645","xrefs":{"Monarch":{"xref_id":"1012645"}}}


id: PBO:0050318
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 20","termid":"PBO:0050318"}


id: GO:0030272
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  {"annotated_genes":["SJAG_01616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74452],"is_not":false,"summary":null,"term":"GO:0030272"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formyltetrahydrofolate + ATP = 5,10-methenyltetrahydrofolate + ADP + H+ + phosphate.","definition_xrefs":["EC:6.3.3.2","RHEA:10488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02301","GO:0019006","Reactome:R-HSA-6801342","MetaCyc:5-FORMYL-THF-CYCLO-LIGASE-RXN"],"synonyms":[{"name":"5,10-methenyltetrahydrofolate synthetase activity","type":"related"},{"name":"5-Formyltetrahydrofolate cyclodehydrase activity","type":"related"},{"name":"5-formyltetrahydrofolate cyclo-ligase (ADP-forming)","type":"related"},{"name":"5-formyltetrahydrofolate cyclodehydrase","type":"broad"},{"name":"formyltetrahydrofolic cyclodehydrase activity","type":"related"},{"name":"methenyl-THF synthetase activity","type":"related"}],"termid":"GO:0030272","terms_by_termid":{"GO:0030272":null}}


id: MONDO:1011962
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D-deficiency rickets, non-type I, non-type II, non-human animal","secondary_identifiers":["OMIA:001614"],"termid":"MONDO:1011962","xrefs":{"Monarch":{"xref_id":"1011962"}}}


id: FYPO:0005385
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the first meiotic nuclear division (part of the meiotic cell cycle) is arrested in metaphase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic metaphase I","secondary_identifiers":["FYPO:0006769"],"synonyms":[{"name":"abnormal cell cycle arrest in metaphase I","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase I during meiotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase during first meiotic nuclear division","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase of meiosis I","type":"exact"},{"name":"abnormal meiotic cell cycle arrest in metaphase I","type":"exact"},{"name":"abolished meiosis I metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0005385"}


id: PBO:0078272
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 8-1","termid":"PBO:0078272"}


id: MONDO:1011194
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrodysplasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplasia, dog","secondary_identifiers":["OMIA:001315-9615"],"termid":"MONDO:1011194","xrefs":{"Monarch":{"xref_id":"1011194"}}}


id: FYPO:0003902
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of etoposide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to etoposide","synonyms":[{"name":"resistance to etoposide during mitotic cell cycle","type":"related"},{"name":"resistance to etoposide during vegetative growth","type":"exact"},{"name":"resistant to etoposide","type":"exact"}],"termid":"FYPO:0003902"}


id: MONDO:0007785
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id: PBO:0062569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AH member 1 pseudogene","termid":"PBO:0062569"}


id: PATO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a lesser than normal extent, or less than fully.","definition_xrefs":["Wikipedia:http://en.wiktionary.org/wiki/hypophosphorylated"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"phosphorylated","termid":"PATO:0002220"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased phosphorylation","synonyms":[{"name":"hypophosporylated ","type":"exact"}],"termid":"PATO:0002222"}


id: GO:0003057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"chemical cardiac inotropy","type":"exact"},{"name":"regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003057"}


id: PBO:0067865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 167","termid":"PBO:0067865"}


id: PBO:0004152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1-UNC-like protein involved protein folding in the ER (predicted)","termid":"PBO:0004152"}


id: GO:0061739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The protein lipidation process by which phosphatidylethanolamine is conjugated to a protein of the ATG8 family, leading to membrane insertion of the protein as a step in autophagosome assembly.","definition_xrefs":["GOC:dph","GOC:autophagy","PMID:11100732","PMID:15277523","PMID:11096062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-terminal protein lipidation","termid":"GO:0006501"},{"relation_name":"part_of","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0042158","GO:0006914"],"is_obsolete":false,"name":"protein lipidation involved in autophagosome assembly","termid":"GO:0061739"}


id: PBO:0077531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 244","termid":"PBO:0077531"}


id: PBO:0060265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYG1 antisense RNA 1","termid":"PBO:0060265"}


id: GO:0075265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of oogonium development","termid":"GO:0075264"},{"relation_name":"positively_regulates","term_name":"oogonium development","termid":"GO:0075263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oogonium development","termid":"GO:0075265"}


id: MONDO:0016768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare mucosal lichen planus (obsolete MONDO:0016768)","secondary_identifiers":["Orphanet:254373","ICD10CM:L43.1"],"synonyms":[{"name":"rare mucosal LP","type":"exact"}],"termid":"MONDO:0016768","xrefs":{"Monarch":{"xref_id":"0016768"}}}


id: PBO:0029489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_abnormal_cell_shape,_normal_cell_size_(obsolete_FYPO:0002226)","termid":"PBO:0029489"}


id: PBO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 7","termid":"PBO:0061215"}


id: PBO:0078703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAA) 5-1","termid":"PBO:0078703"}


id: GO:0062032
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cichorine, a secondary metabolite found in some species of fungi.","definition_xrefs":["PMID:24244835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cichorine biosynthetic process","synonyms":[{"name":"cichorine anabolism","type":"exact"},{"name":"cichorine biosynthesis","type":"exact"},{"name":"cichorine formation","type":"exact"},{"name":"cichorine synthesis","type":"exact"}],"termid":"GO:0062032"}


id: PBO:0027541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_positioning_at_stress_response_genes","termid":"PBO:0027541"}


id: PBO:0088962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein, BUD22 family","termid":"PBO:0088962"}


id: PBO:0035979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035979"}


id: MONDO:0100610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mildest form of autism spectrum disorder, characterized by difficulties with social communication and restricted, repetitive behaviors, requiring minimal support for daily functioning.","direct_ancestors":[{"relation_name":"is_a","term_name":"autism spectrum disorder","termid":"MONDO:0005258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"autism spectrum disorder 1","termid":"MONDO:0100610","xrefs":{"Monarch":{"xref_id":"0100610"}}}


id: GO:0048014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an angiopoietin binding to the Tie receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:ceb","PMID:11283723","PMID:11566266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Tie signaling pathway","synonyms":[{"name":"Tek receptor signaling","type":"exact"},{"name":"Tie receptor signaling pathway","type":"exact"},{"name":"Tie receptor signalling pathway","type":"exact"},{"name":"angiopoietin-Tie signaling pathway","type":"narrow"},{"name":"angiopoietin/Tie signaling pathway","type":"narrow"}],"termid":"GO:0048014"}


id: GO:0034150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 6.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 6 signaling pathway","synonyms":[{"name":"TLR6 signaling pathway","type":"exact"},{"name":"toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034150"}


id: MONDO:0034104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete global developmental delay-alopecia-macrocephaly-facial dysmorphism-structural brain anomalies syndrome (obsolete MONDO:0034104)","termid":"MONDO:0034104","xrefs":{"Monarch":{"xref_id":"0034104"}}}


id: PBO:0028135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_pseudouridine_synthesis_abolished_at_specific_site","termid":"PBO:0028135"}


id: PBO:0077280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM18 divergent transcript","termid":"PBO:0077280"}


id: MONDO:0032894
data:
  {"annotated_genes":["SJAG_04021"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88605],"is_not":false,"summary":null,"term":"MONDO:0032894"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04021":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with epilepsy, spasticity, and brain atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618741","UMLS:C5394027","MEDGEN:1717952"],"synonyms":[{"name":"NEDESBA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH EPILEPSY, SPASTICITY, AND BRAIN ATROPHY","type":"related"}],"termid":"MONDO:0032894","terms_by_termid":{"MONDO:0032894":null},"xrefs":{"Monarch":{"xref_id":"0032894"}}}


id: PBO:0088303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg1","termid":"PBO:0088303"}


id: PBO:0003376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim16 (predicted)","termid":"PBO:0003376"}


id: MOD:01739
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01739"}


id: GO:0019179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-4-amino-4,6-dideoxy-D-glucose + 2-oxoglutarate = dTDP-4-dehydro-6-deoxy-D-glucose + L-glutamate.","definition_xrefs":["EC:2.6.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"dTDP-4-amino-4,6-dideoxy-D-glucose transaminase activity","secondary_identifiers":["RHEA:19085","MetaCyc:2.6.1.33-RXN"],"synonyms":[{"name":"TDP-4-keto-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"TDP-4-oxo-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase activity","type":"exact"},{"name":"dTDP-4-amino-4,6-dideoxy-D-glucose:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-amino-4,6-dideoxyglucose aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-amino-6-deoxyglucose aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-keto-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"thymidine diphospho-4-keto-6-deoxy-D-glucose-glutamic transaminase activity","type":"related"}],"termid":"GO:0019179"}


id: PBO:0038319
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_electronic_publication_date","termid":"PBO:0038319"}


id: GO:0051268
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93767],"is_not":false,"summary":null,"term":"GO:0051268"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-keto amide + 2 H+ (from donor) = (R)-hydroxy amide. Alpha-keto amides are of the form R-CO-CONH2, where R may be aromatic or aliphatic.","definition_xrefs":["PMID:15564669","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-keto amide reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051268","terms_by_termid":{"GO:0051268":null}}


id: GO:0010447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH < 7. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:tb","Wikipedia:PH","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acidic pH","synonyms":[{"name":"response to acidity","type":"broad"}],"termid":"GO:0010447"}


id: GO:0046663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a leading edge cell, the dorsal-most cells of the epidermis that migrates during dorsal closure.","definition_xrefs":["GOC:ai","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell differentiation","termid":"GO:0035026"},{"relation_name":"part_of","term_name":"initiation of dorsal closure","termid":"GO:0007392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell differentiation","termid":"GO:0046663"}


id: GO:0050436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a microfibril, any small fibril occurring in biological material.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"microfibril binding","termid":"GO:0050436"}


id: MONDO:0011229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ethylmalonic acid encephalopathy (EE) is defined by elevated excretion of ethylmalonic acid (EMA) with recurrent petechiae, orthostatic acrocyanosis and chronic diarrhea associated with neurodevelopmental delay, psychomotor regression and hypotonia with brain magnetic resonance imaging (MRI) abnormalities.","definition_xrefs":["Orphanet:51188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethylmalonic encephalopathy","secondary_identifiers":["SCTID:723307008","UMLS:C1865349","MEDGEN:355966","GARD:2198","DOID:0060640","OMIM:602473","MESH:C535737","icd11.foundation:1966714550"],"synonyms":[{"name":"EE","type":"related"},{"name":"EPEMA syndrome","type":"related"},{"name":"eme","type":"related"},{"name":"encephalopathy, ethylmalonic","type":"related"},{"name":"encephalopathy, petechiae, and ethylmalonic aciduria","type":"related"},{"name":"syndrome of encephalopathy, petechiae, and ethylmalonic aciduria","type":"related"}],"termid":"MONDO:0011229","xrefs":{"Monarch":{"xref_id":"0011229"}}}


id: PBO:0087769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad3p that converts adenosine to inosine at the wobble position of several tRNAs","termid":"PBO:0087769"}


id: MONDO:0044236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. More than 2 billion people have been infected with the hepatitis B virus (HBV; see OMIM:610424), and more than 350 million of these people are chronic carriers. Each year more than half a million die as a result of acute or chronic HBV infection. Vaccination has been highly successful at preventing new HBV infections and has been implemented into the national immunization programs of more than 150 countries. However, the immune response to HBV vaccination varies greatly among individuals, with 5 to 10% of healthy adults failing to produce protective levels of antibodies. Several factors have been implicated in determining the response to HBV vaccination, including physical factors, such as age, gender, obesity, immunosuppression, and smoking, as well as variation in genes of the immune system (summary by {2:Davila et al., 2010}).","definition_xrefs":["OMIM:142395"],"gene_count":0,"genotype_count":0,"name":"obsolete hepatitis b vaccine, response to (obsolete MONDO:0044236)","synonyms":[{"name":"HBV vaccine, response to","type":"related"},{"name":"HEPATITIS B vaccine, response to","type":"related"}],"termid":"MONDO:0044236","xrefs":{"Monarch":{"xref_id":"0044236"}}}


id: FYPO:0007011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at non-coding RNA genes is increased.","definition_xrefs":["PMID:31294478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at ncRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at ncRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at ncRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at ncRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at non-coding RNA genes","type":"exact"}],"termid":"FYPO:0007011"}


id: PR:Q8TFH3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium transporter protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.11","secondary_identifiers":["UniProtKB:Q8TFH3"],"synonyms":[{"name":"Spom972h-MAGT1","type":"exact"},{"name":"oligosaccharyl transferase 34 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit OST3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH3"}


id: PBO:0011964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialr to S. pombe SPAC186.09","termid":"PBO:0011964"}


id: PBO:0080130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 9, pseudogene","termid":"PBO:0080130"}


id: PBO:0083856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATP synthase subunit c (ATPase-associated proteolipid); encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2","termid":"PBO:0083856"}


id: GO:0035889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a developing otolith to the kinocilia of tether cells in the inner ear.","definition_xrefs":["PMID:14499652","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"otolith development","termid":"GO:0048840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith tethering","termid":"GO:0035889"}


id: MONDO:0013339
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88982],"is_not":false,"summary":null,"term":"MONDO:0013339"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the SDHA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1GG","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462248","OMIM:613642","UMLS:C3150898","DOID:0110435","GARD:15684"],"synonyms":[{"name":"CMD1GG","type":"exact"},{"name":"SDHA familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1GG","type":"related"},{"name":"cardiomyopathy, dilated, type 1Gg","type":"exact"},{"name":"dilated cardiomyopathy type 1GG","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in SDHA","type":"exact"}],"termid":"MONDO:0013339","terms_by_termid":{"MONDO:0013339":null},"xrefs":{"Monarch":{"xref_id":"0013339"}}}


id: GO:0019557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including glutamate and formate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"},{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-histidine catabolic process to glutamate and formate","secondary_identifiers":["MetaCyc:PWY-5028"],"synonyms":[{"name":"histidine breakdown to glutamate and formate","type":"exact"},{"name":"histidine catabolic process to glutamate and formate","type":"broad"},{"name":"histidine degradation to glutamate and formate","type":"exact"}],"termid":"GO:0019557"}


id: MONDO:0005780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any infection caused by a virus of the genus Hantavirus, which is transmitted by aerosolized rodent excreta or rodent bites, that can result in a variety of clinical manifestations from hemorrhagic fever with renal syndrome to a pulmonary syndrome.","definition_xrefs":["NCIT:C3899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bunyaviridae infectious disease","termid":"MONDO:0021641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hantavirus infectious disease","secondary_identifiers":["UMLS:C0242994","ICD9:079.81","MONDO:0042492","MEDGEN:67028","EFO:0007295","MESH:D018778","SCTID:359761005"],"synonyms":[{"name":"Hantavirus caused disease or disorder","type":"exact"},{"name":"Hantavirus disease or disorder","type":"exact"},{"name":"Hantavirus infection","type":"exact"},{"name":"Hantavirus infectious disease","type":"exact"},{"name":"disease caused by hantavirus","type":"related"},{"name":"disease due to hantavirus","type":"exact"},{"name":"infections, Hantavirus","type":"related"}],"termid":"MONDO:0005780","xrefs":{"Monarch":{"xref_id":"0005780"}}}


id: GO:0140099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts fibrinolysis in another organism via the action of a venom. Fibrinolysis is the solubilization of fibrin in the bloodstream. Anti-fibrinolytic proteins reduce bleeding at the bite or sting site of the prey.","definition_xrefs":["PMID:22359676","PMID:35716829","PMID:19236611","PMID:27208884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of hemostasis","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated suppression of fibrinolysis","synonyms":[{"name":"envenomation suppressing fibrinolysis in another organism","type":"exact"}],"termid":"GO:0140099"}


id: PBO:0003132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC50 domain protein, implicated in signal transduction (predicted)","termid":"PBO:0003132"}


id: PBO:0048709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin","termid":"PBO:0048709"}


id: MONDO:0023693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A maple syrup urine disease caused by mutations in DBT.","direct_ancestors":[{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"maple syrup urine disease type 2","secondary_identifiers":["GARD:8596","HGNC:2698","MEDGEN:343337","OMIM:620699","UMLS:C1855371"],"synonyms":[{"name":"MSUD type 2","type":"related"},{"name":"MSUD2","type":"related"},{"name":"maple syrup urine disease type 2","type":"exact"}],"termid":"MONDO:0023693","xrefs":{"Monarch":{"xref_id":"0023693"}}}


id: MONDO:0013821
data:
  {"annotated_genes":["SJAG_05313","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88204,88205],"is_not":false,"summary":null,"term":"MONDO:0013821"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the SMARCA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15822","MEDGEN:766163","OMIM:614609","DOID:0070046","UMLS:C3553249"],"synonyms":[{"name":"COFFIN-SIRIS syndrome 4","type":"exact"},{"name":"CSS4","type":"exact"},{"name":"Coffin-Siris syndrome caused by mutation in SMARCA4","type":"exact"},{"name":"MRD16","type":"exact"},{"name":"SMARCA4 Coffin-Siris syndrome","type":"exact"},{"name":"SMARCA4-related BAFopathy","type":"exact"},{"name":"autosomal dominant intellectual disability 16","type":"exact"},{"name":"autosomal dominant mental retardation 16","type":"exact"},{"name":"intellectual disability, autosomal dominant 16","type":"exact"},{"name":"intellectual disability, autosomal dominant type 16","type":"exact"},{"name":"mental retardation, autosomal dominant 16","type":"related"},{"name":"mental retardation, autosomal dominant type 16","type":"exact"}],"termid":"MONDO:0013821","terms_by_termid":{"MONDO:0013821":null},"xrefs":{"Monarch":{"xref_id":"0013821"}}}


id: PBO:0065964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 antisense RNA 1","termid":"PBO:0065964"}


id: PATO:0001127
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001127 work value (obsolete PATO:0001127)","termid":"PATO:0001127"}


id: GO:0001714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process that results in a cell becoming capable of differentiating autonomously into an endoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"endodermal cell fate commitment","termid":"GO:0001711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell fate specification","synonyms":[{"name":"endoderm cell fate specification","type":"exact"}],"termid":"GO:0001714"}


id: PATO:0000874
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000874 fearful (obsolete PATO:0000874)","termid":"PATO:0000874"}


id: MONDO:1040036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by an autosomal dominant variant in the IMPG1 gene.","definition_xrefs":["PMID:36109576","PMID:32817297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"IMPG1-related dominant retinopathy","synonyms":[{"name":"IMPG1-related dominant retinopathy","type":"exact"}],"termid":"MONDO:1040036","xrefs":{"Monarch":{"xref_id":"1040036"}}}


id: GO:0052571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the immune response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to symbiont immune response (obsolete GO:0052571)","synonyms":[{"name":"response to symbiont immune response","type":"exact"}],"termid":"GO:0052571"}


id: MONDO:0009164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, axonal, with necrotizing myopathy, cardiomyopathy, and cataracts","secondary_identifiers":["MESH:C565596","MEDGEN:341669","UMLS:C1856990","OMIM:225740"],"synonyms":[{"name":"Lyon syndrome","type":"related"},{"name":"encephalopathy, axonal, with necrotizing myopathy, cardiomyopathy, and cataracts","type":"exact"}],"termid":"MONDO:0009164","xrefs":{"Monarch":{"xref_id":"0009164"}}}


id: PBO:0086903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative tubulin tyrosine ligase associated with P-bodies; may have a role in mRNA metabolism; yeast knockout collection strain identified as a pby1 null mutant is actually wild-type for PBY1 and deleted for mms4","termid":"PBO:0086903"}


id: PBO:0004884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1","termid":"PBO:0004884"}


id: GO:0052830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,3,4,6-tetrakisphosphate + H2O = inositol-1,3,4-trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-1,3,4,6-tetrakisphosphate 6-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855171"],"termid":"GO:0052830"}


id: PBO:0030711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binding_phenotype","termid":"PBO:0030711"}


id: PBO:0077016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS3 antisense RNA 1","termid":"PBO:0077016"}


id: GO:0060038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a cardiac muscle cell population by cell division.","definition_xrefs":["PMID:11161571","GOC:rph","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell proliferation","termid":"GO:0014855"},{"relation_name":"part_of","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell proliferation","synonyms":[{"name":"cardiac myocyte proliferation","type":"exact"},{"name":"cardiomyocyte proliferation","type":"related"},{"name":"heart muscle cell proliferation","type":"exact"}],"termid":"GO:0060038"}


id: PBO:0088366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit","termid":"PBO:0088366"}


id: PBO:0045529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 2","termid":"PBO:0045529"}


id: PBO:0071924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 1","termid":"PBO:0071924"}


id: PBO:0091984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote-like Wtf21","termid":"PBO:0091984"}


id: SO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2'-O-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylcytidine","secondary_identifiers":["RNAMOD:022"],"synonyms":[{"name":"2'-O-methylcytidine","type":"exact"},{"name":"Cm","type":"exact"},{"name":"two prime O methylcytidine","type":"exact"}],"termid":"SO:0001283"}


id: GO:0010733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein glutathionylation. Protein glutathionylation is the protein modification process in which a glutathione molecule is added to a protein amino acid through a disulfide linkage.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:rl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein glutathionylation","termid":"GO:0010732"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"positively_regulates","term_name":"protein glutathionylation","termid":"GO:0010731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein glutathionylation","synonyms":[{"name":"positive regulation of protein amino acid glutathionylation","type":"exact"}],"termid":"GO:0010733"}


id: PR:P79058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug134 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA stability protein mug134 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.16","synonyms":[{"name":"Spom972h-mug134","type":"exact"},{"name":"initiation of G zero protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79058"}


id: MONDO:0032685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development","secondary_identifiers":["UMLS:C5193037","OMIM:618339","MEDGEN:1673640"],"synonyms":[{"name":"CASGID","type":"related"},{"name":"INFANTILE CATARACT, SKIN ABNORMALITIES, GLUTAMATE EXCESS, AND IMPAIRED INTELLECTUAL DEVELOPMENT","type":"related"},{"name":"infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development","type":"exact"}],"termid":"MONDO:0032685","xrefs":{"Monarch":{"xref_id":"0032685"}}}


id: PBO:0066480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refilin A","termid":"PBO:0066480"}


id: GO:1900662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of emericellamide biosynthetic process","termid":"GO:1900659"},{"relation_name":"is_a","term_name":"regulation of emericellamide A biosynthetic process","termid":"GO:1900661"},{"relation_name":"negatively_regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"negative regulation of emericellamide A biosynthetic process","synonyms":[{"name":"down regulation of emericellamide A anabolism","type":"exact"},{"name":"down regulation of emericellamide A biosynthesis","type":"exact"},{"name":"down regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"down regulation of emericellamide A formation","type":"exact"},{"name":"down regulation of emericellamide A synthesis","type":"exact"},{"name":"down-regulation of emericellamide A anabolism","type":"exact"},{"name":"down-regulation of emericellamide A biosynthesis","type":"exact"},{"name":"down-regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"down-regulation of emericellamide A formation","type":"exact"},{"name":"down-regulation of emericellamide A synthesis","type":"exact"},{"name":"downregulation of emericellamide A anabolism","type":"exact"},{"name":"downregulation of emericellamide A biosynthesis","type":"exact"},{"name":"downregulation of emericellamide A biosynthetic process","type":"exact"},{"name":"downregulation of emericellamide A formation","type":"exact"},{"name":"downregulation of emericellamide A synthesis","type":"exact"},{"name":"inhibition of emericellamide A anabolism","type":"exact"},{"name":"inhibition of emericellamide A biosynthesis","type":"exact"},{"name":"inhibition of emericellamide A biosynthetic process","type":"narrow"},{"name":"inhibition of emericellamide A formation","type":"exact"},{"name":"inhibition of emericellamide A synthesis","type":"exact"},{"name":"negative regulation of emericellamide A anabolism","type":"exact"},{"name":"negative regulation of emericellamide A biosynthesis","type":"exact"},{"name":"negative regulation of emericellamide A formation","type":"exact"},{"name":"negative regulation of emericellamide A synthesis","type":"exact"}],"termid":"GO:1900662"}


id: MONDO:0015850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare vaginal malformation characterized by the presence of a complete or incomplete transverse septum at any level of the vagina (most frequently the upper or middle third), resulting from incomplete fusion between the Müllerian duct component and the urogenital sinus component of the vagina during embryogenesis. The condition is only rarely diagnosed in neonates or infants, unless it causes significant hydromucocolpos. Complete septa present with primary amenorrhea, cyclic pelvic pain, dyspareunia, or a pelvic mass consisting of accumulated menstrual blood, while incomplete septa may lead to dyspareunia and dysmenorrhea.","definition_xrefs":["Orphanet:180160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transverse vaginal septum","secondary_identifiers":["icd11.foundation:1265288464","GARD:20191","MEDGEN:341032","HP:0000145","UMLS:C1856006","ICD10CM:Q52.11"],"termid":"MONDO:0015850","xrefs":{"Monarch":{"xref_id":"0015850"}}}


id: GO:1903521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mammary gland involution.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:dph","PMID:23164222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of mammary gland involution","termid":"GO:1903519"},{"relation_name":"positively_regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mammary gland involution","synonyms":[{"name":"activation of mammary gland involution","type":"narrow"},{"name":"up regulation of mammary gland involution","type":"exact"},{"name":"up-regulation of mammary gland involution","type":"exact"},{"name":"upregulation of mammary gland involution","type":"exact"}],"termid":"GO:1903521"}


id: GO:0016681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor (obsolete GO:0016681)","termid":"GO:0016681"}


id: PR:Q10263
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56F8.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C56F8.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.15","synonyms":[{"name":"Spom972h-SPAC56F8.15","type":"exact"}],"termid":"PR:Q10263"}


id: PBO:0053117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 6","termid":"PBO:0053117"}


id: MONDO:0016140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiencies or mutations in the genes for the sarcoglycan complex subunits. A variety of phenotypes are associated with these mutations including a subgroup of autosomal recessive limb girdle muscular dystrophies, cardiomyopathies, and respiratory deficiency.","definition_xrefs":["MESH:D058088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycanopathy","secondary_identifiers":["UMLS:C2936331","MEDGEN:424705","Orphanet:207052","GARD:20389"],"synonyms":[{"name":"qualitative or quantitative defects of sarcoglycan","type":"exact"}],"termid":"MONDO:0016140","xrefs":{"Monarch":{"xref_id":"0016140"}}}


id: PBO:0064239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCXD2 antisense RNA 1","termid":"PBO:0064239"}


id: GO:0033030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of neutrophil apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil apoptotic process","termid":"GO:0033029"},{"relation_name":"is_a","term_name":"negative regulation of myeloid cell apoptotic process","termid":"GO:0033033"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"negatively_regulates","term_name":"neutrophil apoptotic process","termid":"GO:0001781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil apoptotic process","synonyms":[{"name":"down regulation of neutrophil apoptosis","type":"exact"},{"name":"down-regulation of neutrophil apoptosis","type":"exact"},{"name":"downregulation of neutrophil apoptosis","type":"exact"},{"name":"inhibition of neutrophil apoptosis","type":"narrow"},{"name":"negative regulation of neutrophil apoptosis","type":"narrow"}],"termid":"GO:0033030"}


id: MONDO:0017714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"acyl-CoA dehydrogenase deficiency","secondary_identifiers":["UMLS:C0268635","GARD:21318","Orphanet:309120","SCTID:82319005","MEDGEN:541378"],"termid":"MONDO:0017714","xrefs":{"Monarch":{"xref_id":"0017714"}}}


id: MONDO:0013545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the ABCC9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 12","secondary_identifiers":["UMLS:C3279695","OMIM:614050","GARD:15748","MEDGEN:481325"],"synonyms":[{"name":"ABCC9 familial atrial fibrillation","type":"exact"},{"name":"ATFB12","type":"related"},{"name":"atrial fibrillation, familial, 12","type":"exact"},{"name":"atrial fibrillation, familial, type 12","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in ABCC9","type":"exact"}],"termid":"MONDO:0013545","xrefs":{"Monarch":{"xref_id":"0013545"}}}


id: PBO:0063526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 7","termid":"PBO:0063526"}


id: MONDO:0014798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brachydactyly type A1 in which the cause of the disease is a mutation in the BMPR1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brachydactyly type A1","termid":"MONDO:0007215"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A1D","secondary_identifiers":["MEDGEN:903193","GARD:16164","DOID:0110978","OMIM:616849","UMLS:C4225183"],"synonyms":[{"name":"BDA1D","type":"exact"},{"name":"BMPR1B brachydactyly type A1","type":"exact"},{"name":"brachydactyly type A1 caused by mutation in BMPR1B","type":"exact"},{"name":"brachydactyly, type A1, D","type":"exact"}],"termid":"MONDO:0014798","xrefs":{"Monarch":{"xref_id":"0014798"}}}


id: GO:1902606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["PMID:23407708","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of large conductance calcium-activated potassium channel activity (obsolete GO:1902606)","synonyms":[{"name":"regulation of BK KCa channels","type":"exact"},{"name":"regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"regulation of BK channel activity","type":"related"},{"name":"regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902606"}


id: GO:0072468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A signal transduction process that contributes to a cell shape checkpoint.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction involved in cell shape checkpoint (obsolete GO:0072468)","termid":"GO:0072468"}


id: PBO:0085482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable polyprenol reductase; catalyzes conversion of polyprenol to dolichol, the precursor for N-glycosylation; involved in filamentous growth; mutations in human homolog SRD5A3 confer CDG (Congenital Disorders of Glycosylation); human SRD5A3 can complement yeast null mutant","termid":"PBO:0085482"}


id: PBO:0079149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 10","termid":"PBO:0079149"}


id: MONDO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myofibroblastoma occurring in the breast of both women and men. It presents as a slowly growing mass.","definition_xrefs":["NCIT:C40397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"myofibroblastoma","termid":"MONDO:0040675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast myofibroblastoma","secondary_identifiers":["MEDGEN:307311","UMLS:C1511320","DOID:1629"],"synonyms":[{"name":"breast myofibroblastoma","type":"exact"}],"termid":"MONDO:0002062","xrefs":{"Monarch":{"xref_id":"0002062"}}}


id: MONDO:0020707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing loss resulting from disorders of the central nervous system auditory pathways.","definition_xrefs":["NCIT:C34662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central hearing loss","secondary_identifiers":["MEDGEN:9162","UMLS:C0018776","icd11.foundation:1513090105"],"synonyms":[{"name":"central hearing loss","type":"exact"}],"termid":"MONDO:0020707","xrefs":{"Monarch":{"xref_id":"0020707"}}}


id: MONDO:1010930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotubular myopathy 1 that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotubular myopathy 1, non-human animal","termid":"MONDO:1010202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubular myopathy 1, domestic cat","secondary_identifiers":["OMIA:001508-9685"],"termid":"MONDO:1010930","xrefs":{"Monarch":{"xref_id":"1010930"}}}


id: PBO:0078702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 4-1","termid":"PBO:0078702"}


id: MOD:00703
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20) group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"isoprenylated residue","synonyms":[{"name":"IpRes","type":"exact"}],"termid":"MOD:00703"}


id: PR:Q1MTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTQ1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein tea2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.20c","synonyms":[{"name":"Spom972h-tea2","type":"exact"},{"name":"Tip elongation aberrant protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"kinesin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1MTQ1"}


id: PBO:0059531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Cys (UGU/C)","termid":"PBO:0059531"}


id: PATO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000928 absolute photosensitivity (obsolete PATO:0000928)","termid":"PATO:0000928"}


id: MOD:00108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-tyrosine amide.","definition_xrefs":["PubMed:1377792","PubMed:6509012","RESID:AA0099","PubMed:3562898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine amide","synonyms":[{"name":"(2S)-2-amino-3-(4-hydoxyphenyl)propanamide","type":"exact"},{"name":"L-tyrosine amide","type":"exact"},{"name":"MOD_RES Tyrosine amide","type":"exact"},{"name":"TyrN","type":"exact"},{"name":"amidated L-tyrosine","type":"exact"},{"name":"tyrosinamide","type":"exact"}],"termid":"MOD:00108"}


id: PBO:0054757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2168","termid":"PBO:0054757"}


id: PBO:0088312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0088312"}


id: MONDO:0031178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete monosomy 7 myelodysplasia and leukemia syndrome (obsolete MONDO:0031178)","termid":"MONDO:0031178","xrefs":{"Monarch":{"xref_id":"0031178"}}}


id: GO:0033843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-xylosyl residue from UDP-D-xylose to a glucose residue in xyloglucan, forming an alpha-1,6-D-xylosyl-D-glucose linkage.","definition_xrefs":["EC:2.4.2.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylosyltransferase activity","termid":"GO:0042285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"xyloglucan 6-xylosyltransferase activity","synonyms":[{"name":"UDP-D-xylose:xyloglucan 1,6-alpha-D-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-xyloglucan 6alpha-xylosyltransferase activity","type":"related"},{"name":"xyloglucan 6-alpha-D-xylosyltransferase activity","type":"related"}],"termid":"GO:0033843"}


id: FYPO:0008024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyphosphate measured in a cell (total or free) is lower than normal.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular polyphosphate level","synonyms":[{"name":"decreased level of polyphosphate in cell","type":"broad"}],"termid":"FYPO:0008024"}


id: PBO:0090142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-type precatalytic spliceosome WW domain-binding protein Wbp4","termid":"PBO:0090142"}


id: MONDO:0016052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical autism is a pervasive developmental disorder that does not fit the diagnosis for the other specific autistic spectrum disorders (autism, Asperger syndrome, Rett syndrome or childhood disintegrative disorder) and is characterized by usually milder developmental and social delay and less stereotypical autistic behavior. '","definition_xrefs":["Orphanet:199627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"atypical autism","secondary_identifiers":["MedDRA:10003747","DOID:0060042","ICD9:299.80","UMLS:C0338986","GARD:20336","MEDGEN:572882","icd11.foundation:2136163538","SCTID:231536004"],"termid":"MONDO:0016052","xrefs":{"Monarch":{"xref_id":"0016052"}}}


id: PBO:0065911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGAP1L antisense RNA 1","termid":"PBO:0065911"}


id: GO:0008275
data:
  {"annotated_genes":["SJAG_07018","SJAG_01215","SJAG_02609","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102942,110820,111580,112565],"is_not":false,"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A complex usually comprising two gamma-tubulin molecules and two conserved non-tubulin proteins. Some gamma-tubulin small complexes are thought to be the repeating unit making up the core of the gamma-tubulin ring complex.","definition_xrefs":["PMID:12134075","PMID:11297925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex","termid":"GO:0000930"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"gamma-tubulin small complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000928","GO:0000927","GO:0061495"],"synonyms":[{"name":"Tub4 complex","type":"narrow"},{"name":"gamma-tubulin small complex, centrosomal","type":"narrow"},{"name":"gamma-tubulin small complex, mitotic spindle pole body","type":"narrow"},{"name":"gamma-tubulin small complex, spindle pole body","type":"narrow"},{"name":"gammaTuSC","type":"exact"}],"termid":"GO:0008275","terms_by_termid":{"GO:0008275":null}}


id: GO:0035765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a motor neuron precursor cell that contributes to formation of the dorsal motor nucleus of the vagus nerve.","definition_xrefs":["PMID:21262462","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve formation","termid":"GO:0035764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor neuron precursor migration involved in dorsal motor nucleus of vagus nerve formation","termid":"GO:0035765"}


id: MONDO:0013850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete periodic fever, menstrual cycle-dependent (obsolete MONDO:0013850)","termid":"MONDO:0013850","xrefs":{"Monarch":{"xref_id":"0013850"}}}


id: GO:0102468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate + wogonin = UDP + wogonin 7-O-beta-D-glucuronate + H+.","definition_xrefs":["RHEA:28322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"wogonin 7-O-glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14060"],"termid":"GO:0102468"}


id: MOD:00793
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82616],"is_not":false,"summary":null,"term":"MOD:00793"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to dehydroalanine.","definition_xrefs":["PubMed:1547888","PubMed:20805503","PubMed:2914619","PubMed:7947813","PubMed:15799070","PubMed:8239649","ChEBI:17123","PubMed:1815586","PubMed:10220322","PubMed:11212008","RESID:AA0181#CYS","DeltaMass:8","Unimod:368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"dehydroalanine (Cys)","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Cys->Dha","type":"related"},{"name":"Dehydroalanine (from Cysteine)","type":"exact"},{"name":"Dha","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Cys)","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dHAla(Cys)","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:00793","terms_by_termid":{"MOD:00793":null}}


id: GO:0019233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. A painful stimulus is any physical or chemical event that has the potential to cause tissue damage (actual or perceived) and activates the nociceptive system.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of pain","secondary_identifiers":["Wikipedia:Nociception"],"synonyms":[{"name":"nociception","type":"related"},{"name":"perception of physiological pain","type":"narrow"}],"termid":"GO:0019233"}


id: PBO:0073734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC1A2 antisense RNA 2","termid":"PBO:0073734"}


id: PBO:0066439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulophagy regulator 1","termid":"PBO:0066439"}


id: PBO:0064003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 37","termid":"PBO:0064003"}


id: PBO:0005771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CTD-binding SR-like protein rA9 homolog (predicted)","termid":"PBO:0005771"}


id: SO:0000159
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point at which one or more contiguous nucleotides were excised.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion","secondary_identifiers":["http://en.wikipedia.org/wiki/Nucleotide_deletion","SO:1000033","loinc:LA6692-3"],"synonyms":[{"name":"deleted_sequence","type":"exact"},{"name":"nucleotide deletion","type":"exact"},{"name":"nucleotide_deletion","type":"exact"}],"termid":"SO:0000159"}


id: MONDO:0044328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short-rib thoracic dysplasia (SRTD) with or without polydactyly refers to a group of autosomal recessive skeletal ciliopathies that are characterized by a constricted thoracic cage, short ribs, shortened tubular bones, and a 'trident' appearance of the acetabular roof. SRTD encompasses Ellis-van Creveld syndrome (EVC) and the disorders previously designated as Jeune syndrome or asphyxiating thoracic dystrophy (ATD), short rib-polydactyly syndrome (SRPS), and Mainzer-Saldino syndrome (MZSDS). Polydactyly is variably present, and there is phenotypic overlap in the various forms of SRTDs, which differ by visceral malformation and metaphyseal appearance. Nonskeletal involvement can include cleft lip/palate as well as anomalies of major organs such as the brain, eye, heart, kidneys, liver, pancreas, intestines, and genitalia. Some forms of SRTD are lethal in the neonatal period due to respiratory insufficiency secondary to a severely restricted thoracic cage, whereas others are compatible with life (summary by {1:Huber and Cormier-Daire, 2012} and {2:Schmidts et al., 2013}).nnThere is phenotypic overlap with the cranioectodermal dysplasias (Sensenbrenner syndrome; see CED1, OMIM:218330).","definition_xrefs":["OMIM:617925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 20 with polydactyly","secondary_identifiers":["MEDGEN:1634931","UMLS:C4693616"],"synonyms":[{"name":"SRTD20","type":"related"},{"name":"short-rib thoracic dysplasia 20 with polydactyly","type":"exact"}],"termid":"MONDO:0044328","xrefs":{"Monarch":{"xref_id":"0044328"}}}


id: PBO:0029232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0029232"}


id: MONDO:1011891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral compressive myelopathy, non-human animal","secondary_identifiers":["OMIA:001894"],"termid":"MONDO:1011891","xrefs":{"Monarch":{"xref_id":"1011891"}}}


id: GO:0019606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-oxobutyrate, the anion of the organic acid 2-oxobutyric acid, which contains a ketone group on carbon 2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"},{"relation_name":"is_a","term_name":"2-oxobutyrate metabolic process","termid":"GO:0046361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"2-oxobutyrate catabolic process","secondary_identifiers":["MetaCyc:2OXOBUTYRATECAT-PWY"],"synonyms":[{"name":"2-oxobutyrate breakdown","type":"exact"},{"name":"2-oxobutyrate catabolism","type":"exact"},{"name":"2-oxobutyrate degradation","type":"exact"},{"name":"alpha-ketobutyrate catabolic process","type":"exact"},{"name":"alpha-ketobutyrate catabolism","type":"exact"}],"termid":"GO:0019606"}


id: PBO:0070410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A3","termid":"PBO:0070410"}


id: PBO:0087256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in sphingolipid-mediated signaling pathway that controls endocytosis; activates Ypk1p and Ykr2p, components of signaling cascade required for maintenance of cell wall integrity; contains a PH-like domain; redundant with Pkh1p; PKH2 has a paralog, PKH1, that arose from the whole genome duplication","termid":"PBO:0087256"}


id: PBO:0109284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylitol dehydrogenase","termid":"PBO:0109284"}


id: RO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is sequentially adjacent to y iff x and y do not overlap and if there are no base units intervening between x and y","direct_ancestors":[{"relation_name":"is_a","term_name":"does_not_overlap_sequence_of","termid":"RO:0002527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequentially_adjacent_to","termid":"RO:0002515"}


id: PBO:0028296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_stress_responsive_gene_mRNA_during_vegetative_growth","termid":"PBO:0028296"}


id: FYPO:0005353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the RTS1 barrier is normal (i.e. indistinguishable from wild type). Note that the RTS1 barrier usually occurs in the mating type locus, but might be assayed at ectopic loci to maximise the distance that a restarted fork travels.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal replication fork arrest at RTS1 barrier","synonyms":[{"name":"normal replication fork arrest at mating-type locus","type":"related"},{"name":"normal replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"normal replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005353"}


id: PBO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_endoplasmic_reticulum_stress","termid":"PBO:0035790"}


id: PBO:0075708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 2B","termid":"PBO:0075708"}


id: PBO:0081155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein like 1","termid":"PBO:0081155"}


id: PBO:0116305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion, self-perpetuating amyloid fibrils that modify cellular fitness, alter translational fidelity by affecting reading frame selection, and result in a nonsense suppressor phenotype; forms reversible liquid condensates in response to both acidic and osmotic stress to promote survival; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0116305"}


id: PBO:0057209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376c","termid":"PBO:0057209"}


id: MONDO:0021103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Historically, a heterogeneous group of acute and chronic diseases, including rheumatoid arthritis, systemic lupus erythematosus, progressive systemic sclerosis, dermatomyositis, etc. This classification was based on the notion that 'collagen' was equivalent to 'connective tissue', but with the present recognition of the different types of collagen and the aggregates derived from them as distinct entities, the term 'collagen diseases' now pertains exclusively to those inherited conditions in which the primary defect is at the gene level and affects collagen biosynthesis, post-translational modification, or extracellular processing directly. (From Cecil Textbook of Medicine, 19th ed, p1494)","definition_xrefs":["MESH:D003095"],"gene_count":0,"genotype_count":0,"name":"obsolete collagen diseases (obsolete MONDO:0021103)","secondary_identifiers":["SCTID:81573002","DOID:854","ICD9:710.8","ICD9:710.9"],"synonyms":[{"name":"collagen disease","type":"exact"},{"name":"collagen disorder","type":"exact"},{"name":"disease, collagen","type":"exact"},{"name":"diseases, collagen","type":"exact"}],"termid":"MONDO:0021103","xrefs":{"Monarch":{"xref_id":"0021103"}}}


id: GO:1900874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heptadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heptadec-1-ene metabolic process","synonyms":[{"name":"heptadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900874"}


id: PBO:0088914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37","termid":"PBO:0088914"}


id: MONDO:0008044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myoclonus-dystonia syndrome in which the cause of the disease is a mutation in the SGCE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus-dystonia syndrome","termid":"MONDO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"myoclonic dystonia 11","secondary_identifiers":["GARD:18616","MEDGEN:331778","DOID:0090034","OMIM:159900","UMLS:C1834570"],"synonyms":[{"name":"DYT11","type":"related"},{"name":"SGCE myoclonus-dystonia syndrome","type":"exact"},{"name":"alcohol-responsive dystonia","type":"exact"},{"name":"dystonia 11, myoclonic","type":"related"},{"name":"dystonia, alcohol-responsive","type":"related"},{"name":"dystonia-11, myoclonic","type":"exact"},{"name":"myoclonic dystonia","type":"related"},{"name":"myoclonic dystonia 11","type":"exact"},{"name":"myoclonic dystonia type 11","type":"exact"},{"name":"myoclonus, hereditary essential","type":"related"},{"name":"myoclonus-dystonia syndrome","type":"related"},{"name":"myoclonus-dystonia syndrome caused by mutation in SGCE","type":"exact"}],"termid":"MONDO:0008044","xrefs":{"Monarch":{"xref_id":"0008044"}}}


id: PBO:0060458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAIP pseudogene 1","termid":"PBO:0060458"}


id: GO:2000678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}


id: PBO:0070586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 52","termid":"PBO:0070586"}


id: PBO:0080593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 20","termid":"PBO:0080593"}


id: GO:0015257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete organic anion channel activity (obsolete GO:0015257)","synonyms":[{"name":"organic anion channel activity","type":"exact"}],"termid":"GO:0015257"}


id: PBO:0044386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 13","termid":"PBO:0044386"}


id: FYECO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 5-fluoroorotic acid (FOA) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FOA","synonyms":[{"name":"+ 5-fluoroorotic acid","type":"exact"}],"termid":"FYECO:0000370"}


id: PBO:0068692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 73, pseudogene","termid":"PBO:0068692"}


id: PBO:0005157
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calnexin Independence Factor","termid":"PBO:0005157"}


id: MONDO:0005880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the intestinal tract with worms of the genus oesophagostomum. This condition occurs mainly in animals other than humans.","definition_xrefs":["MESH:D009814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oesophagostomiasis","secondary_identifiers":["ICD9:127.7","UMLS:C0028887","icd11.foundation:1664841973","SCTID:22500005","MEDGEN:18151","DOID:3983"],"synonyms":[{"name":"Oesophagostomum caused disease or disorder","type":"exact"},{"name":"Oesophagostomum disease or disorder","type":"exact"},{"name":"Oesophagostomum infectious disease","type":"exact"},{"name":"infection by Oesophagostomum","type":"exact"}],"termid":"MONDO:0005880","xrefs":{"Monarch":{"xref_id":"0005880"}}}


id: PBO:0038542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 15","termid":"PBO:0038542"}


id: PBO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex subunit Swd1","termid":"PBO:0001578"}


id: PBO:0068528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 129, pseudogene","termid":"PBO:0068528"}


id: GO:1990699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoleyl moiety, a 16-carbon monounsaturated fatty acid (C16:1), from some substrate.","definition_xrefs":["PMID:25731175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"palmitoleyl hydrolase activity","termid":"GO:1990699"}


id: PBO:0088012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II myosin heavy chain; required for wild-type cytokinesis and cell separation; localizes to the actomyosin ring; binds to myosin light chains Mlc1p and Mlc2p through its IQ1 and IQ2 motifs respectively","termid":"PBO:0088012"}


id: PBO:0056341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 1","termid":"PBO:0056341"}


id: GO:0009699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aromatic derivatives of trans-cinnamic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phenylpropanoid biosynthetic process","synonyms":[{"name":"phenylpropanoid anabolism","type":"exact"},{"name":"phenylpropanoid biosynthesis","type":"exact"},{"name":"phenylpropanoid formation","type":"exact"},{"name":"phenylpropanoid synthesis","type":"exact"}],"termid":"GO:0009699"}


id: MONDO:0017584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bone disease that arises due to secondary hyperparathyroidism in patients with chronic renal failure receiving dialysis characterized by 'uglifying' the appearance of the face","definition_xrefs":["PMID:27545627","PMID:15490409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sagliker syndrome","secondary_identifiers":["UMLS:C5681093","GARD:21233","MEDGEN:1808631","Orphanet:300493"],"termid":"MONDO:0017584","xrefs":{"Monarch":{"xref_id":"0017584"}}}


id: MONDO:0010797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pearson syndrome is characterized by refractory sideroblastic anemia, vacuolization of bone marrow precursors and exocrine pancreatic dysfunction.","definition_xrefs":["Orphanet:699"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"constitutional neutropenia","termid":"MONDO:0015134"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disorder with intestinal involvement (obsolete MONDO:0015188)","termid":"MONDO:0015188"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with hypoparathyroidism (obsolete MONDO:0015895)","termid":"MONDO:0015895"},{"relation_name":"excluded_subClassOf","term_name":"obsolete mitochondrial oxidative phosphorylation disorder due to a large-scale single deletion of mitochondrial DNA (obsolete MONDO:0016792)","termid":"MONDO:0016792"},{"relation_name":"excluded_subClassOf","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pearson syndrome","secondary_identifiers":["GARD:7343","NCIT:C115326","MEDGEN:87459","OMIM:557000","ICD9:277.87","icd11.foundation:452521132","MedDRA:10062941","SCTID:237985009","UMLS:C0342784","DOID:0060067"],"synonyms":[{"name":"Pearson marrow-pancreas syndrome","type":"exact"},{"name":"Pearson's marrow/pancreas syndrome","type":"related"},{"name":"Pearson's syndrome","type":"related"},{"name":"sideroblastic Anaemia with marrow cell vacuolization and exocrine pancreatic dysfunction","type":"related"},{"name":"sideroblastic Anemia with marrow cell vacuolization and exocrine pancreatic dysfunction","type":"related"},{"name":"sideroblastic anaemia with marrow cell vacuolization and exocrine pancreatic dysfunction (formerly)","type":"related"},{"name":"sideroblastic anemia with marrow cell vacuolization and exocrine pancreatic dysfunction (formerly)","type":"related"}],"termid":"MONDO:0010797","xrefs":{"Monarch":{"xref_id":"0010797"}}}


id: PBO:0032717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_anaphase-promoting_complex_assembly","termid":"PBO:0032717"}


id: PBO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.12","termid":"PBO:0005061"}


id: PBO:0084245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner plaque spindle pole body (SPB) component; gamma-tubulin small complex (gamma-TuSC) receptor that interacts with Spc98p to recruit the complex to the nuclear side of the SPB, connecting nuclear microtubules to the SPB; promotes gamma-TuSC assembly and oligomerization to initiate microtubule nucleation; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner; ortholog of human pericentrin (kendrin)","termid":"PBO:0084245"}


id: MONDO:0008423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial sick sinus syndrome","termid":"MONDO:0012061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sinus node disease and myopia","secondary_identifiers":["GARD:4880","MEDGEN:401121","MESH:C566690","OMIM:182190","UMLS:C1866960"],"synonyms":[{"name":"Sss-myopia syndrome","type":"related"},{"name":"sick sinus syndrome and myopia","type":"related"},{"name":"sinus node disease and myopia","type":"exact"}],"termid":"MONDO:0008423","xrefs":{"Monarch":{"xref_id":"0008423"}}}


id: PBO:0005524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp5","termid":"PBO:0005524"}


id: MONDO:0013960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sinoatrial node dysfunction and deafness is a rare genetic disease characterized by congenital severe to profound deafness with no evidence of vestibular dysfunction, associated with sinoatrial node dysfunction with pronounced bradycardia and increased variability of heart rate at rest and episodic syncopes that may be triggered by enhanced physical activity and stress.","definition_xrefs":["Orphanet:324321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sinoatrial node dysfunction and deafness","secondary_identifiers":["MEDGEN:766932","GARD:17484","OMIM:614896","UMLS:C3554018"],"synonyms":[{"name":"SANDD","type":"related"},{"name":"sinoatrial node dysfunction and deafness","type":"exact"}],"termid":"MONDO:0013960","xrefs":{"Monarch":{"xref_id":"0013960"}}}


id: PBO:0046282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 1","termid":"PBO:0046282"}


id: PBO:0047214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 222 member B","termid":"PBO:0047214"}


id: GO:1900765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emericellin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"emericellin metabolic process","termid":"GO:1900764"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"emericellin catabolic process","synonyms":[{"name":"Variecoxanthone B breakdown","type":"related"},{"name":"Variecoxanthone B catabolic process","type":"related"},{"name":"Variecoxanthone B catabolism","type":"related"},{"name":"Variecoxanthone B degradation","type":"related"},{"name":"emericellin breakdown","type":"exact"},{"name":"emericellin catabolism","type":"exact"},{"name":"emericellin degradation","type":"exact"}],"termid":"GO:1900765"}


id: PATO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition not to progress, invade surrounding tissues or metastasize.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, non-malignant","synonyms":[{"name":"benign","type":"related"}],"termid":"PATO:0002096"}


id: MONDO:0003501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the skin of the external ear.","definition_xrefs":["NCIT:C6083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external ear carcinoma","termid":"MONDO:0002944"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"external ear squamous cell carcinoma","secondary_identifiers":["UMLS:C1333494","DOID:5538","MEDGEN:232478"],"synonyms":[{"name":"epidermoid carcinoma of external Ear","type":"exact"},{"name":"epidermoid carcinoma of the external Ear","type":"exact"},{"name":"epidermoid carcinoma of the external ear","type":"exact"},{"name":"external Ear epidermoid carcinoma","type":"exact"},{"name":"external Ear squamous cell carcinoma","type":"exact"},{"name":"external ear squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of external Ear","type":"exact"},{"name":"squamous cell carcinoma of external ear","type":"related"},{"name":"squamous cell carcinoma of the external Ear","type":"exact"}],"termid":"MONDO:0003501","xrefs":{"Monarch":{"xref_id":"0003501"}}}


id: PBO:0078231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 13","termid":"PBO:0078231"}


id: MONDO:0018855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon form of keratosis pilaris in which there are scar-like follicular depressions and loss of hair.","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"keratosis pilaris","termid":"MONDO:0021036"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis pilaris atrophicans","secondary_identifiers":["MEDGEN:75520","DOID:0080751","GARD:18694","icd11.foundation:273325594","ICD9:757.39","MESH:C537412","Orphanet:498","SCTID:400059005","OMIM:604093","UMLS:C0263428"],"synonyms":[{"name":"Atrophodermia reticulata","type":"related"},{"name":"Atrophodermia reticulata symmetrica faciei","type":"related"},{"name":"Atrophodermia vermiculata","type":"related"},{"name":"KPA","type":"related"},{"name":"amelogenesis imperfecta, hypoplastic-hypomaturation, X-linked 2","type":"related"},{"name":"burnett Schwartz Berberian syndrome","type":"related"},{"name":"folliculitis ulerythematosa","type":"related"},{"name":"folliculitis ulerythematosa reticulata","type":"related"},{"name":"honeycomb atrophy","type":"related"},{"name":"keratosis pilaris","type":"related"},{"name":"keratosis pilaris atrophicans","type":"exact"},{"name":"keratosis pilaris atrophicans facies","type":"related"},{"name":"ulerythema ophryogenes","type":"related"},{"name":"ulerythema ophryogenes with multiple congenital anomalies","type":"related"},{"name":"ulerythema ophryogenesis","type":"related"}],"termid":"MONDO:0018855","xrefs":{"Monarch":{"xref_id":"0018855"}}}


id: MOD:00375
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4,5-dihydroxy-L-lysine.","definition_xrefs":["PubMed:12686488","Unimod:425#K","PubMed:10978343","RESID:AA0370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated lysine","termid":"MOD:00681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4,5-dihydroxy-L-lysine","synonyms":[{"name":"(2S,4Xi,5Xi)-2,6-diamino-4,5-dihydroxyhexanoic acid","type":"exact"},{"name":"4,5-dihydroxy-L-lysine","type":"exact"},{"name":"4,5-dihydroxylated L-lysine","type":"exact"},{"name":"45Hy2Lys","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES 4,5-dihydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-delta,gamma-dihydroxycaproic acid","type":"exact"},{"name":"delta,gamma-dihydroxylysine","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00375"}


id: GO:0050789
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