# terms

id: PBO:0044246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut like homeobox 2 pseudogene 1","termid":"PBO:0044246"}


id: FYPO:0003148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity","termid":"FYPO:0003147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity","termid":"FYPO:0003148"}


id: PBO:0030167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spore_lysis","termid":"PBO:0030167"}


id: GO:0033072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of vancomycin, (3S,6R,7R,11R,23S,26S,30aS,36R,38aR)-44-[2-O-(3-amino-2,3,6-trideoxy-3-C-methyl-alpha-L-lyxo-hexopyranosyl)-beta-D-glucopyranosyloxy]-3-(carbamoylmethyl)-10,19-dichloro-2,3,4,5,6,7,23,25,26,36,37,38,38a-tetradecahydro-7,22,28,30,32-pentahydroxy-6-(N-methyl-D-leucyl)-2,5,24,38,39-pentaoxo-1H,22H-23,36-(epiminomethano)-8,11:18,21-dietheno-13,16:31,35-di(metheno)[1,6,9]oxadiazacyclohexadecino[4,5-m][10,2,16]benzoxadiazacyclotetracosine-26-carboxylic acid, a complex glycopeptide from Streptomyces orientalis that inhibits a specific step in the synthesis of the peptidoglycan layer in Gram-positive bacteria.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"},{"relation_name":"is_a","term_name":"peptide antibiotic biosynthetic process","termid":"GO:0030651"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vancomycin biosynthetic process","synonyms":[{"name":"vancomycin anabolism","type":"exact"},{"name":"vancomycin biosynthesis","type":"exact"},{"name":"vancomycin formation","type":"exact"},{"name":"vancomycin synthesis","type":"exact"}],"termid":"GO:0033072"}


id: MONDO:1012583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ametopodia that occurs in chickens with dominant inheritance.","definition_xrefs":["PMID:6055328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ametapodia-1, chicken","secondary_identifiers":["OMIA:000035-9031"],"termid":"MONDO:1012583","xrefs":{"Monarch":{"xref_id":"1012583"}}}


id: GO:1901045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of egg-laying behavior","synonyms":[{"name":"down regulation of egg laying","type":"broad"},{"name":"down regulation of egg-laying","type":"broad"},{"name":"down regulation of oviposition","type":"exact"},{"name":"down-regulation of egg laying","type":"broad"},{"name":"down-regulation of egg-laying","type":"broad"},{"name":"down-regulation of oviposition","type":"exact"},{"name":"downregulation of egg laying","type":"broad"},{"name":"downregulation of egg-laying","type":"broad"},{"name":"downregulation of oviposition","type":"exact"},{"name":"inhibition of egg laying","type":"broad"},{"name":"inhibition of egg-laying","type":"broad"},{"name":"inhibition of oviposition","type":"narrow"},{"name":"negative regulation of egg laying","type":"broad"},{"name":"negative regulation of egg-laying","type":"broad"},{"name":"negative regulation of oviposition","type":"exact"}],"termid":"GO:1901045"}


id: MONDO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Caroli disease (obsolete MONDO:0000506)","termid":"MONDO:0000506","xrefs":{"Monarch":{"xref_id":"0000506"}}}


id: PBO:0031725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination","termid":"PBO:0031725"}


id: GO:0048658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anther wall tapetum over time, from its formation to the mature structure.","definition_xrefs":["GOC:sm","GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum development","synonyms":[{"name":"tapetal layer development","type":"broad"},{"name":"tapetum development","type":"broad"}],"termid":"GO:0048658"}


id: PBO:0076780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEA domain transcription factor 3","termid":"PBO:0076780"}


id: GO:0160089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein adaptor that recognizes and binds an RNA molecule modified by N(7)-methylguanine (m7G), a modification present at internal sites of mRNAs and some non-coding RNAs.","definition_xrefs":["PMID:37379838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"internal N(7)-methylguanine-containing RNA reader activity","termid":"GO:0160089"}


id: PBO:0108683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp7","termid":"PBO:0108683"}


id: PBO:0062074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 5","termid":"PBO:0062074"}


id: PBO:0053287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 1","termid":"PBO:0053287"}


id: MONDO:0850072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated craniosynostosis","termid":"MONDO:0015337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic unisutural craniosynostosis","secondary_identifiers":["Orphanet:620096","MEDGEN:1843281","GARD:22469","UMLS:C5680403"],"termid":"MONDO:0850072","xrefs":{"Monarch":{"xref_id":"0850072"}}}


id: PBO:0003505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Tsr2 (predicted)","termid":"PBO:0003505"}


id: GO:0050139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + UDP-D-glucose = N-(beta-D-glucosyl)nicotinate + UDP.","definition_xrefs":["RHEA:19437","EC:2.4.1.196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"nicotinate-N-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01722","MetaCyc:NICOTINATE-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:nicotinic acid-N-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"nicotinate glucosyltransferase activity","type":"broad"},{"name":"uridine diphosphoglucose-nicotinate N-glucosyltransferase activity","type":"related"}],"termid":"GO:0050139"}


id: GO:1902697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-valine to isobutanol.","definition_xrefs":["PMID:9748245","GOC:TermGenie","GOC:mengo_curators","GO_REF:0000093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-valine catabolic process","termid":"GO:0006574"},{"relation_name":"is_a","term_name":"isobutanol metabolic process","termid":"GO:1901960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-valine catabolic process to isobutanol","secondary_identifiers":["MetaCyc:PWY-5057","GO:1990292"],"synonyms":[{"name":"valine breakdown to isobutanol","type":"exact"},{"name":"valine catabolism to isobutanol","type":"exact"},{"name":"valine degradation to isobutanol","type":"exact"}],"termid":"GO:1902697"}


id: PBO:0071110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 112","termid":"PBO:0071110"}


id: PR:Q8TFF9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fah1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase PB8B6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB8B6.03","synonyms":[{"name":"Spom972h-fah1","type":"exact"}],"termid":"PR:Q8TFF9"}


id: GO:0015524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+(out) + (L-arabinose or beta-D-thiogalactopyranoside)(in) = H+(in) + (L-arabinose or beta-D-thiogalactopyranoside)(out).","definition_xrefs":["TC:2.A.1.2.15"],"gene_count":0,"genotype_count":0,"name":"obsolete L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity (obsolete GO:0015524)","synonyms":[{"name":"L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity","type":"exact"},{"name":"L-arabinose/beta-D-thiogalactopyranoside:proton antiporter activity","type":"exact"}],"termid":"GO:0015524"}


id: PBO:0053707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 910","termid":"PBO:0053707"}


id: GO:1902656
data:
  {"annotated_genes":["SJAG_05229","SJAG_04668","SJAG_04551","SJAG_01090","SJAG_02877","SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76342,94347,68378,116434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[115357,93165],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[104100],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ion into a cytosol.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"calcium ion import into cytosol","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcium import into cytosol","type":"broad"}],"termid":"GO:1902656","terms_by_termid":{"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: GO:1901314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A K63-linked ubiquitination (obsolete GO:1901314)","termid":"GO:1901314"}


id: PBO:0111914
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-8 family","termid":"PBO:0111914"}


id: PBO:0043943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptochrome circadian regulator 2","termid":"PBO:0043943"}


id: MONDO:0023111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial capillaro-venous leptomeningeal angiomatosis","secondary_identifiers":["MESH:C536609","UMLS:C2931262","MEDGEN:419030"],"termid":"MONDO:0023111","xrefs":{"Monarch":{"xref_id":"0023111"}}}


id: PR:Q9P7H1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:11683392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.09c","secondary_identifiers":["UniProtKB:Q9P7H1","PR:000027624"],"synonyms":[{"name":"CDC fourteen-like phosphatase 1","type":"exact"},{"name":"CLP1","type":"related"},{"name":"FLP1","type":"related"},{"name":"SPAC1782.09C","type":"related"},{"name":"Spom972h-clp1","type":"exact"},{"name":"tyrosine-protein phosphatase CDC14 homolog","type":"exact"}],"termid":"PR:Q9P7H1"}


id: PBO:0070458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 1","termid":"PBO:0070458"}


id: PBO:0076798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor, mitochondrial","termid":"PBO:0076798"}


id: PBO:0002786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA hydrolase (predicted)","termid":"PBO:0002786"}


id: GO:0099608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the temporal pattern of a sequence of action potentials in a neuron.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"spike train","termid":"GO:0098874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential firing pattern","synonyms":[{"name":"spike train sculpting","type":"exact"}],"termid":"GO:0099608"}


id: PBO:0065869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB26, member RAS oncogene family","termid":"PBO:0065869"}


id: PBO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein","termid":"PBO:0000489"}


id: GO:0019271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the hydroxamate iron transport compound aerobactin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Aerobactin (C22H36N4O13) is a conjugate of 6-(N-acetyl-N-hydroxylamine)-2-aminohexanoic acid and citric acid.","definition_xrefs":["GOC:ai","PMID:23192658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transport","termid":"GO:0006842"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"aerobactin transport","termid":"GO:0019271"}


id: PBO:0081878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 823","termid":"PBO:0081878"}


id: PBO:0083198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene LDB7/YBL006C","termid":"PBO:0083198"}


id: GO:1901802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,5-anhydro-D-fructose.","definition_xrefs":["GOC:yaf","UniPathway:UPA00738","MetaCyc:PWY-6992","GOC:TermGenie","PMID:15716041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"1,5-anhydro-D-fructose metabolic process","termid":"GO:1901801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose catabolic process","synonyms":[{"name":"1,5-anhydro-D-fructose breakdown","type":"exact"},{"name":"1,5-anhydro-D-fructose catabolism","type":"exact"},{"name":"1,5-anhydro-D-fructose degradation","type":"exact"}],"termid":"GO:1901802"}


id: GO:0014883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of fast-contracting muscle fibers to a slower character. This may involve slowing of contractile rate, slow myosin gene induction, increase in oxidative metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle adaptation","termid":"GO:0014733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transition between fast and slow fiber","synonyms":[{"name":"transition between fast and slow fibre","type":"exact"},{"name":"transition fast-slow fiber","type":"exact"},{"name":"transition fast-slow fibre","type":"exact"}],"termid":"GO:0014883"}


id: MONDO:0004862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous disorder","termid":"MONDO:0004860"},{"relation_name":"is_a","term_name":"purulent endophthalmitis","termid":"MONDO:0004863"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreous abscess","secondary_identifiers":["UMLS:C0042904","SCTID:48142003","DOID:9723","ICD9:360.04","icd11.foundation:1185507932","MEDGEN:508292"],"termid":"MONDO:0004862","xrefs":{"Monarch":{"xref_id":"0004862"}}}


id: GO:0098590
data:
  {"annotated_genes":["SJAG_01114","SJAG_01978","SJAG_01983","SJAG_03536","SJAG_05285","SJAG_02222","SJAG_01738","SJAG_04673","SJAG_04905","SJAG_01189","SJAG_02924","SJAG_04714","SJAG_04167","SJAG_00368","SJAG_01660","SJAG_01437","SJAG_04358","SJAG_02684","SJAG_04637","SJAG_02916","SJAG_01388","SJAG_04001","SJAG_04620","SJAG_02351","SJAG_02989","SJAG_03608","SJAG_03915","SJAG_01888","SJAG_01353","SJAG_01794","SJAG_02572","SJAG_01345","SJAG_02258","SJAG_04668","SJAG_00514","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91804,94339,117807,89825,101710,108064,109006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032154"},{"annotations":[89934,93226],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090689"},{"annotations":[108557],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106186"},{"annotations":[90082,100929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070250"},{"annotations":[98324,112178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070867"},{"annotations":[104965,91811,94656,89834,98990,97474,110420,95421,94345,90222,102635,114338,103743,112851,94437,117814,119215,111421,116379,90084,98942,117467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031520"},{"annotations":[79942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902929"},{"annotations":[105208,90392,91280,120548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane that is a (regional) part of the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01189":null,"SJAG_01345":null,"SJAG_01353":null,"SJAG_01388":null,"SJAG_01437":null,"SJAG_01660":null,"SJAG_01738":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_02222":null,"SJAG_02258":null,"SJAG_02351":null,"SJAG_02572":null,"SJAG_02684":null,"SJAG_02916":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03536":null,"SJAG_03608":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04167":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04620":null,"SJAG_04637":null,"SJAG_04668":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04905":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane region","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"region of plasma membrane","type":"exact"}],"termid":"GO:0098590","terms_by_termid":{"GO:0031520":null,"GO:0032154":null,"GO:0044853":null,"GO:0070250":null,"GO:0070867":null,"GO:0090689":null,"GO:0106186":null,"GO:1902929":null}}


id: PBO:0056515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 1","termid":"PBO:0056515"}


id: PBO:0090226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S2","termid":"PBO:0090226"}


id: PBO:0082904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cystathionine beta-synthase; catalyzes synthesis of cystathionine from serine and homocysteine, the first committed step in cysteine biosynthesis; responsible for hydrogen sulfide generation; advances passage through START by promoting cell growth which requires catalytic activity, and reducing critical cell size independent of catalytic activity; mutations in human ortholog CBS cause homocystinuria; human CBS can complement yeast null mutant","termid":"PBO:0082904"}


id: PBO:0054109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1474","termid":"PBO:0054109"}


id: MONDO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"excluded_subClassOf","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","termid":"MONDO:0021034"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pigmentation defects-palmoplantar keratoderma-skin carcinoma syndrome","secondary_identifiers":["OMIM:618373","UMLS:C5681108","MEDGEN:1807813","Orphanet:447961","GARD:17776"],"synonyms":[{"name":"CANCER, ALOPECIA, PIGMENT DYSCRASIA, ONYCHODYSTROPHY, AND KERATODERMA","type":"related"},{"name":"CAPOK","type":"related"}],"termid":"MONDO:0018657","xrefs":{"Monarch":{"xref_id":"0018657"}}}


id: MONDO:0014258
data:
  {"annotated_genes":["SJAG_04549"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87745],"is_not":false,"summary":null,"term":"MONDO:0014258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809971","OMIM:615574","MEDGEN:816301","Orphanet:391376","GARD:17617"],"synonyms":[{"name":"ASNSD","type":"related"},{"name":"Asns deficiency","type":"related"},{"name":"asparagine synthetase deficiency","type":"exact"},{"name":"congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome","type":"exact"}],"termid":"MONDO:0014258","terms_by_termid":{"MONDO:0014258":null},"xrefs":{"Monarch":{"xref_id":"0014258"}}}


id: PBO:0070098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 12 pseudogene","termid":"PBO:0070098"}


id: PBO:0090943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type zinc finger protein, Prp19 complex subunit, RNA-binding Cwf2","termid":"PBO:0090943"}


id: PBO:0051227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-20-1 (pseudogene)","termid":"PBO:0051227"}


id: GO:0045128
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109947],"is_not":false,"summary":null,"term":"GO:0045128"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reciprocal meiotic recombination","termid":"GO:0010520"},{"relation_name":"is_a","term_name":"negative regulation of meiotic nuclear division","termid":"GO:0045835"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"negatively_regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0007049","GO:0140013","GO:0006310"],"is_obsolete":false,"name":"negative regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of meiotic recombination","type":"exact"},{"name":"down-regulation of meiotic recombination","type":"exact"},{"name":"downregulation of meiotic recombination","type":"exact"},{"name":"inhibition of meiotic recombination","type":"narrow"},{"name":"suppression of meiotic recombination","type":"exact"}],"termid":"GO:0045128","terms_by_termid":{"GO:0045128":null}}


id: GO:0097493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell, providing elasticity and recoiling.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:23283722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural molecule activity conferring elasticity","termid":"GO:0097493"}


id: PBO:0005286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ipi1 (predicted)","termid":"PBO:0005286"}


id: GO:0043662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The soluble material inside the peribacteroid membrane, but outside of the bacteroid, within a bacteroid-containing symbiosome.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"peribacteroid fluid","termid":"GO:0043662"}


id: PBO:0056862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIB E3 ubiquitin protein ligase 2","termid":"PBO:0056862"}


id: GO:0103031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:L-alanyl-L-glutamate = L-alanyl-D-glutamate.","definition_xrefs":["RHEA:28394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-Ala-D/L-Glu epimerase activity","secondary_identifiers":["MetaCyc:RXN0-5228","EC:5.1.1.20"],"termid":"GO:0103031"}


id: PBO:0063435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 9","termid":"PBO:0063435"}


id: GO:0021688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar molecular layer. This process pertains to the initial formation of a structure from unspecified parts. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","ISBN:0838580343","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar molecular layer morphogenesis","termid":"GO:0021687"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer formation","termid":"GO:0021688"}


id: MONDO:0024674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplastic syndrome characterized by obstruction of the thoracic outlet leading to compression of the brachial plexus and vessels within. It is usually caused by a malignant neoplasm in the superior pulmonary sulcus. The most commonly involved neoplasms are non-small cell lung carcinomas. Clinical signs include Horner's syndrome, shoulder pain radiating down the arm in the ulnar distribution followed by edema and atrophy of the affected extremity. Clinical course usually leads to early local invasion of the bony thoracic structures. Prognosis is highly stage-dependent.","definition_xrefs":["NCIT:C55815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pancoast syndrome","secondary_identifiers":["UMLS:C0030271","MEDGEN:10553","MESH:D010178","SCTID:278065000"],"synonyms":[{"name":"Pancoast syndrome","type":"exact"},{"name":"Pancoast tumor","type":"related"},{"name":"Pancoast tumour","type":"related"},{"name":"Pancoast's syndrome","type":"exact"},{"name":"Pancoasts syndrome","type":"related"},{"name":"superior pulmonary sulcus syndrome","type":"related"},{"name":"syndrome, Pancoast","type":"related"},{"name":"syndrome, Pancoast's","type":"related"},{"name":"tumor, Pancoast","type":"related"}],"termid":"MONDO:0024674","xrefs":{"Monarch":{"xref_id":"0024674"}}}


id: FYPO:0002532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm","type":"exact"}],"termid":"FYPO:0002532"}


id: FYPO:0000940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased protein localization to mitotic SPB","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0000940"}


id: PBO:0063371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prenylcysteine oxidase 1","termid":"PBO:0063371"}


id: GO:1902756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sulfurated eukaryotic molybdenum cofactor(2-).","definition_xrefs":["GOC:dph","PMID:18258600","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"sulfurated eukaryotic molybdenum cofactor(2-) metabolic process","termid":"GO:1902755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sulfurated eukaryotic molybdenum cofactor(2-) biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5963"],"synonyms":[{"name":"sulfurated eukaryotic molybdenum cofactor(2-) anabolism","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) biosynthesis","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) formation","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) synthesis","type":"exact"}],"termid":"GO:1902756"}


id: GO:0015355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"secondary active monocarboxylate transmembrane transporter activity","synonyms":[{"name":"monocarboxylate porter activity","type":"related"}],"termid":"GO:0015355"}


id: GO:0086053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an AV node cardiomyocyte and a bundle of His cardiac muscle cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:dph","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell communication by electrical coupling","synonyms":[{"name":"atrioventricular node cell to bundle of His cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086053"}


id: PBO:0085548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; homologous to mammalian ribosomal protein S14 and bacterial S11; RPS14A has a paralog, RPS14B, that arose from the whole genome duplication","termid":"PBO:0085548"}


id: PBO:0003259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S17 (predicted)","termid":"PBO:0003259"}


id: PBO:0066734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 31","termid":"PBO:0066734"}


id: PBO:0067399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 505, pseudogene","termid":"PBO:0067399"}


id: GO:1990162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 4) + H2O = histone H3 L-lysine (position 4) + acetate. This reaction represents the removal of an acetyl group from lysine at position 4 of the histone H3 protein.","definition_xrefs":["PMID:28450737","PMID:23771057","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0019213","GO:0016810","GO:0033558","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"histone H3K4 deacetylase activity, hydrolytic mechanism","synonyms":[{"name":"histone H3-K4 deacetylase activity","type":"exact"},{"name":"histone H3K14 deacetylase activity","type":"broad"},{"name":"histone deacetylase activity (H3-K4 specific)","type":"broad"}],"termid":"GO:1990162"}


id: MONDO:0006139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaplastic changes in the cervical glandular or squamous epithelium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"},{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical metaplasia","secondary_identifiers":["UMLS:C0281796","MEDGEN:129096","EFO:1000168"],"termid":"MONDO:0006139","xrefs":{"Monarch":{"xref_id":"0006139"}}}


id: PBO:0085112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclease required for DNA single- and double-strand break repair; acts at a post-incision step in repair of breaks that result from interstrand cross-links produced by a variety of mono- and bi-functional psoralen derivatives; induced by UV-irradiation; forms nuclear foci upon DNA replication stress","termid":"PBO:0085112"}


id: PBO:0113482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telobox-containing general regulatory factor; binds TTAGGG repeats within subtelomeric anti-silencing regions (STARs), blocking silent chromatin propagation; binds majority of snoRNA gene promoters, required for full snoRNA expression; caps DSB flanked by long T2AG3 repeats and blocks checkpoint activation; involved in nucleosome displacement during double-strand break repair","termid":"PBO:0113482"}


id: GO:0047541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-furoate + ATP + CoA = 2-furoyl-CoA + AMP + diphosphate + H+.","definition_xrefs":["EC:6.2.1.31","RHEA:19269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"2-furoate-CoA ligase activity","secondary_identifiers":["MetaCyc:2-FUROATE--COA-LIGASE-RXN","KEGG_REACTION:R02986"],"synonyms":[{"name":"2-furoate:CoA ligase (AMP-forming)","type":"related"},{"name":"2-furoyl coenzyme A synthetase activity","type":"related"}],"termid":"GO:0047541"}


id: MONDO:0011015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 17p13.","definition_xrefs":["PMID:8852669","DOID:0110257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset anterior polar cataract","termid":"MONDO:0020373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 24","secondary_identifiers":["GARD:15327","MESH:C537774","MEDGEN:371364","OMIM:601202","UMLS:C1832609"],"synonyms":[{"name":"CTAA2","type":"narrow"},{"name":"CTRCT24","type":"exact"},{"name":"anterior polar cataract 2","type":"narrow"},{"name":"anterior polar cataract 24","type":"narrow"},{"name":"cataract 24","type":"exact"},{"name":"cataract 24, anterior polar","type":"related"},{"name":"cataract type 24","type":"exact"},{"name":"cataract, anterior polar, 2","type":"related"}],"termid":"MONDO:0011015","xrefs":{"Monarch":{"xref_id":"0011015"}}}


id: PBO:0089811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit Swc3","termid":"PBO:0089811"}


id: PBO:0072793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 3","termid":"PBO:0072793"}


id: PBO:0066457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 10, pseudogene","termid":"PBO:0066457"}


id: PBO:0056763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15 pseudogene 2","termid":"PBO:0056763"}


id: FYPO:0002020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation","type":"related"},{"name":"increased RNA level during nitrogen depletion","type":"exact"},{"name":"increased RNA level during nitrogen deprivation","type":"exact"},{"name":"increased transcript level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002020"}


id: PATO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being drawn together, compressed or squeezed physically.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constricted","secondary_identifiers":["PATO:0001837"],"synonyms":[{"name":"stenosis","type":"exact"},{"name":"stenotic","type":"exact"},{"name":"stricture","type":"exact"}],"termid":"PATO:0001847"}


id: MONDO:0030748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 3A, intermediate","secondary_identifiers":["MEDGEN:1812940","OMIM:619785","UMLS:C5676938"],"synonyms":[{"name":"JEB3A","type":"exact"},{"name":"epidermolysis bullosa, junctional 3A, generalised intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 3A, generalized intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 3A, intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 3A, non-herlitz IIA","type":"exact"}],"termid":"MONDO:0030748","xrefs":{"Monarch":{"xref_id":"0030748"}}}


id: MONDO:0008445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is extremely rare and is characterized by delayed speech development, mild facial asymmetry, strabismus and transverse ear lobe creases.","definition_xrefs":["Orphanet:3038"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed speech-facial asymmetry-strabismus-ear lobe creases syndrome","secondary_identifiers":["UMLS:C1866802","MEDGEN:355803","OMIM:182875","GARD:3449","SCTID:716199000"],"synonyms":[{"name":"Mehes syndrome","type":"exact"},{"name":"delayed speech development, facial asymmetry, strabismus, and transverse ear lobe creases","type":"related"},{"name":"speech development, delayed, with facial asymmetry, strabismus, and transverse earlobe CREASE","type":"related"}],"termid":"MONDO:0008445","xrefs":{"Monarch":{"xref_id":"0008445"}}}


id: PBO:0090451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose diphosphatase, NudF subfamily Ysa1","termid":"PBO:0090451"}


id: PBO:0075329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 2","termid":"PBO:0075329"}


id: GO:0072076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a nephrogenic mesenchyme from an initial condition to its mature state. This process begins with the formation of nephrogenic mesenchyme and ends with the mature structure. Nephrogenic mesenchyme is the tissue made up of loosely connected mesenchymal cells in the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme development","termid":"GO:0072074"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrogenic mesenchyme development","termid":"GO:0072076"}


id: GO:0090267
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118675],"is_not":false,"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of spindle checkpoint","termid":"GO:0090232"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090266"},{"relation_name":"positively_regulates","term_name":"mitotic spindle assembly checkpoint signaling","termid":"GO:0007094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0044772","GO:0000070","GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090267","terms_by_termid":{"GO:0090267":null}}


id: GO:0042171
data:
  {"annotated_genes":["SJAG_04041","SJAG_04792","SJAG_04323","SJAG_01957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72991],"is_not":false,"summary":null,"term":"GO:0042171"},{"annotations":[78710,91981,73553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003841"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of acyl groups from an acyl-CoA to lysophosphatidic acid to form phosphatidic acid.","definition_xrefs":["PMID:16369050","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysophospholipid acyltransferase activity","termid":"GO:0071617"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_04041":null,"SJAG_04323":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"lysophosphatidic acid acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"LPAAT activity","type":"exact"}],"termid":"GO:0042171","terms_by_termid":{"GO:0003841":null,"GO:0042171":null}}


id: _global:regulates_o_results_in_formation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the results_in_formation_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_formation_of","secondary_identifiers":["GOREL:0001025"],"termid":"_global:regulates_o_results_in_formation_of"}


id: PATO:0001215
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001215 time_unit (obsolete PATO:0001215)","termid":"PATO:0001215"}


id: GO:1904724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane-enclosed lumen that is part of a tertiary granule.","definition_xrefs":["GOC:TermGenie","PMID:23650620","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"tertiary granule","termid":"GO:0070820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"tertiary granule lumen","synonyms":[{"name":"gelatinase granule membrane-enclosed lumen","type":"related"},{"name":"membrane-enclosed lumen of gelatinase granule","type":"exact"},{"name":"membrane-enclosed lumen of tertiary granule","type":"exact"},{"name":"tertiary granule membrane-enclosed lumen","type":"exact"}],"termid":"GO:1904724"}


id: PBO:0028524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9K14_acetylation","termid":"PBO:0028524"}


id: PBO:0065791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain and coiled-coil containing 1 like","termid":"PBO:0065791"}


id: GO:0009280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. In Gram-negative bacteria the membrane that separates the cytoplasm from the murein sacculus.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall inner membrane (obsolete GO:0009280)","synonyms":[{"name":"cell wall inner membrane","type":"exact"},{"name":"cytoplasmic membrane","type":"broad"}],"termid":"GO:0009280"}


id: PBO:0057442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 559","termid":"PBO:0057442"}


id: GO:0008851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanolamine = acetaldehyde + NH3.","definition_xrefs":["EC:4.3.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ethanolamine ammonia-lyase activity","secondary_identifiers":["MetaCyc:ETHAMLY-RXN","RHEA:15313"],"synonyms":[{"name":"ethanolamine ammonia-lyase (acetaldehyde-forming) activity","type":"related"},{"name":"ethanolamine deaminase activity","type":"related"}],"termid":"GO:0008851"}


id: PBO:0057752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1911","termid":"PBO:0057752"}


id: MONDO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Patau syndrome (obsolete MONDO:0001333)","termid":"MONDO:0001333","xrefs":{"Monarch":{"xref_id":"0001333"}}}


id: MONDO:0018042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency syndrome with abnormal pigmentation (obsolete MONDO:0018042)","secondary_identifiers":["Orphanet:331249","icd11.foundation:2015243510"],"synonyms":[{"name":"immunodeficiency syndrome with hypopigmentation","type":"related"}],"termid":"MONDO:0018042","xrefs":{"Monarch":{"xref_id":"0018042"}}}


id: MONDO:0008226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized aggressive periodontitis, formerly called localized juvenile periodontitis. It is a destructive form of periodontitis characterized by ALVEOLAR BONE LOSS of the MOLARS and INCISORS. Inflammation and loss of PERIODONTIUM that is characterized by rapid attachment loss and bone destruction in the presence of little local factors such as DENTAL PLAQUE and DENTAL CALCULUS. This highly destructive form of periodontitis often occurs in young people and was called early-onset periodontitis, but this disease also appears in old people.","definition_xrefs":["EFO:0006342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic periodontitis","termid":"MONDO:0005593"},{"relation_name":"is_a","term_name":"CTSC-related disorder","termid":"MONDO:0800465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"periodontitis, aggressive 1","secondary_identifiers":["DOID:1474","MESH:D010520","ICD9:523.5","OMIM:170650","MEDGEN:1644602","UMLS:C4551681"],"synonyms":[{"name":"juvenile periodontitis","type":"exact"},{"name":"periodontitis 1, juvenile","type":"exact"},{"name":"periodontitis, aggressive, 1","type":"related"},{"name":"periodontitis, aggressive, type 1","type":"exact"},{"name":"periodontitis, juvenile","type":"related"},{"name":"periodontitis, prepubertal","type":"related"}],"termid":"MONDO:0008226","xrefs":{"Monarch":{"xref_id":"0008226"}}}


id: GO:0061088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of sequestering of zinc ion (obsolete GO:0061088)","termid":"GO:0061088"}


id: PBO:0117414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 9","termid":"PBO:0117414"}


id: FYPO:0008181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding by a gene product to the RNA polymerase II CTD domain phosphorylated serine 5 is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA polymerase II CTD binding","termid":"FYPO:0008180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased RNA polymerase II CTD Ser5-P binding","termid":"FYPO:0008181"}


id: PBO:0049306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega 1","termid":"PBO:0049306"}


id: PBO:0059212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRM3 pseudogene 1","termid":"PBO:0059212"}


id: GO:0043855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"cyclic nucleotide-activated monoatomic ion channel activity","synonyms":[{"name":"cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"cyclic nucleotide-gated ion channel activity","type":"broad"},{"name":"cyclic nucleotide-gated monoatomic ion channel activity","type":"exact"}],"termid":"GO:0043855"}


id: PBO:0005014
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ALG11","termid":"PBO:0005014"}


id: PBO:0065962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD50 double strand break repair protein","termid":"PBO:0065962"}


id: GO:0051937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of catecholamines, a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transport","termid":"GO:0015844"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"catecholamine transport","termid":"GO:0051937"}


id: MONDO:0020784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short sleep, familial natural, 1 (obsolete MONDO:0020784)","secondary_identifiers":["OMIM:612975"],"synonyms":[{"name":"FNSS1","type":"related"},{"name":"SHORT SLEEP, FAMILIAL NATURAL, 1","type":"related"},{"name":"Short Sleep Phenotype","type":"related"},{"name":"short sleep, familial natural, 1","type":"exact"}],"termid":"MONDO:0020784","xrefs":{"Monarch":{"xref_id":"0020784"}}}


id: PBO:0034022
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0034022"}


id: PBO:0075647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY4 intronic transcript 1","termid":"PBO:0075647"}


id: PBO:0085898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to the nucleus; required for asymmetric localization of Kar9p during mitosis","termid":"PBO:0085898"}


id: PBO:0076144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 3","termid":"PBO:0076144"}


id: PBO:0061099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 3","termid":"PBO:0061099"}


id: MONDO:1010644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia B that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B, non-human animal","termid":"MONDO:1010075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia B, domestic cat","secondary_identifiers":["OMIA:000438-9685"],"termid":"MONDO:1010644","xrefs":{"Monarch":{"xref_id":"1010644"}}}


id: PBO:0087501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of GID Complex, binds strongly to central component Vid30p; GID Complex is involved in proteasome-dependent catabolite inactivation of fructose-1,6-bisphosphatase; recruits Rmd5p, Fyv10 and Vid28p to GID Complex; contains LisH, CTLH, and CRA domains that mediate binding to Vid30p (LisH) and Rmd5p and Vid28p (CTLH and CRA); dosage-dependent regulator of START","termid":"PBO:0087501"}


id: GO:2000300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle exocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic vesicle exocytosis","termid":"GO:2000300"}


id: PR:P40903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp6 gene.","definition_xrefs":["UniProtKB:P40903","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process putative subtilase-type proteinase isp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.04","synonyms":[{"name":"Spom972h-isp6","type":"exact"}],"termid":"PR:P40903"}


id: GO:0052610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-cryptoxanthin + a reduced electron acceptor + oxygen = zeaxanthin + an oxidized electron acceptor + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-cryptoxanthin hydroxylase activity (obsolete GO:0052610)","synonyms":[{"name":"beta-carotene hydroxylase activity","type":"broad"},{"name":"carotene beta-ring hydroxylase activity","type":"broad"}],"termid":"GO:0052610"}


id: GO:0008138
data:
  {"annotated_genes":["SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017017"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0140096","GO:0003824","GO:0004721","GO:0016787"],"is_obsolete":false,"name":"protein tyrosine/serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5675376","Reactome:R-HSA-5675373","Reactome:R-HSA-9652816"],"synonyms":[{"name":"dual-specificity protein phosphatase","type":"broad"}],"termid":"GO:0008138","terms_by_termid":{"GO:0017017":null}}


id: PBO:0038579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1","termid":"PBO:0038579"}


id: PBO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain","termid":"PBO:0000766"}


id: GO:0140993
data:
  {"annotated_genes":["SJAG_03900","SJAG_03006","SJAG_04039","SJAG_03548","SJAG_01837","SJAG_00943","SJAG_03041","SJAG_00676","SJAG_03844","SJAG_02165","SJAG_03627","SJAG_03537","SJAG_00581","SJAG_02990","SJAG_03997","SJAG_03286","SJAG_01146","SJAG_02756","SJAG_04574","SJAG_04186","SJAG_00769","SJAG_02401","SJAG_03630","SJAG_02319","SJAG_02773","SJAG_00341","SJAG_01204","SJAG_00678","SJAG_00364","SJAG_02350","SJAG_03720","SJAG_01193","SJAG_03635","SJAG_02659","SJAG_01075","SJAG_03487","SJAG_02873","SJAG_00596","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[77385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[75919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[118235,108594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140995"},{"annotations":[75179,112185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"},{"annotations":[120867,118210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[92704,93361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[111456,64958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[79230,92000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[96299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[93362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[89333,72317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[97434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[80478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046975"},{"annotations":[65485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[68439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[58501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[100918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[106151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[80477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[59216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[76840,72014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[74470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[92001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[93363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[111457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[79231,116422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[72314,119761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[112482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[63915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[96033,61472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[112484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"},{"annotations":[118684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035175"},{"annotations":[80118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072354"},{"annotations":[75921,100919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[90377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[111458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[111459,99163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[79232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[119022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"},{"annotations":[90378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[111460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[90379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[111461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[78392,72835,78253,115520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042054"}]},"cv_n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catalytic activity that acts on a histone protein. Reversible histone modifications contribute to regulation of gene expression.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00364":null,"SJAG_00581":null,"SJAG_00596":null,"SJAG_00676":null,"SJAG_00678":null,"SJAG_00769":null,"SJAG_00943":null,"SJAG_01075":null,"SJAG_01146":null,"SJAG_01193":null,"SJAG_01204":null,"SJAG_01837":null,"SJAG_02165":null,"SJAG_02319":null,"SJAG_02350":null,"SJAG_02401":null,"SJAG_02659":null,"SJAG_02756":null,"SJAG_02773":null,"SJAG_02873":null,"SJAG_02990":null,"SJAG_03006":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03487":null,"SJAG_03537":null,"SJAG_03548":null,"SJAG_03627":null,"SJAG_03630":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03720":null,"SJAG_03844":null,"SJAG_03900":null,"SJAG_03997":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone modifying activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0140993","terms_by_termid":{"GO:0004402":null,"GO:0008469":null,"GO:0010485":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0032454":null,"GO:0032931":null,"GO:0034647":null,"GO:0034739":null,"GO:0035175":null,"GO:0036408":null,"GO:0042054":null,"GO:0042800":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0046969":null,"GO:0046970":null,"GO:0046975":null,"GO:0051864":null,"GO:0062122":null,"GO:0072354":null,"GO:0140680":null,"GO:0140683":null,"GO:0140765":null,"GO:0140850":null,"GO:0140851":null,"GO:0140937":null,"GO:0140943":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140995":null,"GO:0140999":null,"GO:0141222":null,"GO:0180032":null,"GO:0180033":null,"GO:1990259":null}}


id: PATO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's catalytic activity divided by the volume of the system.","definition_xrefs":["IUPAC:IUPAC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalytic (activity) concentration","termid":"PATO:0001674"}


id: FYPO:0008162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the incidence of mitotic cell cycle arrest or delay due to regulation by the mitotic S-phase DNA damage checkpoint is greater than in wild type under any specified set of conditions.","definition_xrefs":["PMID:18344406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"},{"relation_name":"is_a","term_name":"increased mitotic DNA damage checkpoint activation","termid":"FYPO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"increased activation of S-phase DNA damage checkpoint","termid":"FYPO:0008162"}


id: FYPO:0004711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more translation RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Translation RNAs are transcribed from genes whose products are involved in translation.","definition_xrefs":["PomBase:mah","PMID:18203864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered level of translation gene mRNA during vegetative growth","termid":"FYPO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of translation gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of translation gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of translation gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of translation gene transcripts during vegetative growth","type":"exact"},{"name":"decreased translation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of translation gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004711"}


id: SO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoded within a transposable element. For example gag, int, env and pol are the transposable element genes of the TY element in yeast.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"part_of","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_gene","synonyms":[{"name":"transposable element gene","type":"exact"}],"termid":"SO:0000111"}


id: GO:0047375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-D-galactosaminoglycan = acetate + D-galactosaminoglycan.","definition_xrefs":["MetaCyc:3.1.1.58-RXN","EC:3.1.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788","GO:0019213"],"is_obsolete":false,"name":"N-acetylgalactosaminoglycan deacetylase activity","synonyms":[{"name":"N-acetyl galactosaminoglycan deacetylase activity","type":"related"},{"name":"N-acetyl-D-galactosaminoglycan acetylhydrolase activity","type":"related"},{"name":"Vi-polysaccharide deacetylase activity","type":"related"},{"name":"polysaccharide deacetylase activity","type":"related"}],"termid":"GO:0047375"}


id: GO:0031686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A1 adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"A1 adenosine receptor binding","synonyms":[{"name":"A1 adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031686"}


id: PBO:0011982
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poikiloderma with neutropenia","termid":"PBO:0011982"}


id: GO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of addition of phosphate groups to amino acids within a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"negative regulation of phosphorylation","termid":"GO:0042326"},{"relation_name":"negatively_regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein phosphorylation","synonyms":[{"name":"down regulation of protein amino acid phosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid phosphorylation","type":"exact"},{"name":"downregulation of protein amino acid phosphorylation","type":"exact"},{"name":"inhibition of protein amino acid phosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001933"}


id: PBO:0058948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marker of proliferation Ki-67","termid":"PBO:0058948"}


id: MOD:01896
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by trifluoroacetic acid forming an adduct, either a salt or a hydrogen bonded carboxylic acid dimer, with an amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifluoroacetic acid adduct","synonyms":[{"name":"TFA","type":"exact"}],"termid":"MOD:01896"}


id: PBO:0040064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP regulated phosphoprotein 19","termid":"PBO:0040064"}


id: MONDO:0859598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute erythroid leukemia characterized by the presence of at least 50% erythroid precursors and at least 20% myeloblasts in the bone marrow.","definition_xrefs":["DOID:0080916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute erythroid leukemia","termid":"MONDO:0017858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"erythroleukemia","secondary_identifiers":["MEDGEN:1614281","NCIT:C7152","UMLS:C4520840"],"termid":"MONDO:0859598","xrefs":{"Monarch":{"xref_id":"0859598"}}}


id: PBO:0043921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary rootlet coiled-coil, rootletin family member 2","termid":"PBO:0043921"}


id: MONDO:0011181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital fibrosis of extraocular muscles in which the cause of the disease is a mutation in the PHOX2A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"fibrosis of extraocular muscles, congenital, 2","secondary_identifiers":["UMLS:C1865915","DOID:0081016","MESH:C566587","GARD:15341","OMIM:602078","MEDGEN:356119"],"synonyms":[{"name":"CFEOM2","type":"related"},{"name":"Feom2 locus","type":"related"},{"name":"PHOX2A congenital fibrosis of extraocular muscles","type":"exact"},{"name":"congenital fibrosis of extraocular muscles caused by mutation in PHOX2A","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 2","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, autosomal recessive","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, type 2","type":"exact"}],"termid":"MONDO:0011181","xrefs":{"Monarch":{"xref_id":"0011181"}}}


id: PBO:0038499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 8","termid":"PBO:0038499"}


id: PBO:0044376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYMP antisense RNA 1","termid":"PBO:0044376"}


id: GO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Chemical reaction, between proteins and reactive oxygen species, that occurs in dividing cells as they age and leads to a variety of changes in the affected proteins, including increases in protein carbonyl content, oxidized methionine, protein hydrophobicity, and cross-linking.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of oxidatively modified proteins involved in replicative cell aging (obsolete GO:0001318)","synonyms":[{"name":"formation of oxidatively modified proteins during replicative cell ageing","type":"related"},{"name":"formation of oxidatively modified proteins during replicative cell aging","type":"related"}],"termid":"GO:0001318"}


id: PBO:0005615
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.20.4.1","termid":"PBO:0005615"}


id: GO:0018036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-asparagine amide by hydrolysis and oxidation of an interior Asn-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0083"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-asparagine amidation (obsolete GO:0018036)","termid":"GO:0018036"}


id: MONDO:0004281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eccrine porocarcinoma that arises from the sweat glands in the vulva.","definition_xrefs":["NCIT:C40306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar eccrine adenocarcinoma","termid":"MONDO:0003861"},{"relation_name":"is_a","term_name":"eccrine porocarcinoma","termid":"MONDO:0006189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"vulvar eccrine porocarcinoma","secondary_identifiers":["MEDGEN:275616","DOID:7565","UMLS:C1520081"],"synonyms":[{"name":"eccrine porocarcinoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva eccrine porocarcinoma","type":"exact"},{"name":"vulvar eccrine porocarcinoma","type":"exact"}],"termid":"MONDO:0004281","xrefs":{"Monarch":{"xref_id":"0004281"}}}


id: MONDO:0003589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant adipose tissue neoplasm of the ovary.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sarcoma","termid":"MONDO:0002225"},{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"liposarcoma of the ovary","secondary_identifiers":["DOID:5697","MEDGEN:233808","UMLS:C1335165","NCIT:C6419"],"synonyms":[{"name":"liposarcoma of ovary","type":"exact"},{"name":"ovarian liposarcoma","type":"exact"},{"name":"ovary liposarcoma","type":"exact"}],"termid":"MONDO:0003589","xrefs":{"Monarch":{"xref_id":"0003589"}}}


id: PBO:0045741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF3 antisense RNA 1","termid":"PBO:0045741"}


id: MOD:00233
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and 5'-phosphoguanosine through a phosphoramide ester bond to form N6-(phospho-5'-guanosine)-L-lysine.","definition_xrefs":["Unimod:413#K","DeltaMass:304","PubMed:6092377","PubMed:6264433","RESID:AA0228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"guanylated residue","termid":"MOD:01163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(phospho-5'-guanosine)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(5'-guanosine phosphonamino)hexanoic acid","type":"exact"},{"name":"5'-guanylic-N6-L-lysine","type":"exact"},{"name":"5'phos Guanosyl","type":"exact"},{"name":"ACT_SITE N6-GMP-lysine intermediate","type":"exact"},{"name":"L-lysine monoanhydride with 5'-guanylic acid","type":"exact"},{"name":"N(zeta)-5'-guanylic-lysine","type":"exact"},{"name":"N6-(5'-guanylyl)-lysine","type":"exact"},{"name":"N6-(phospho-5'-guanosine)-L-lysine","type":"exact"},{"name":"N6-L-lysine 5'-guanosine phosphoramidester","type":"exact"},{"name":"N6GMPLys","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"epsilon-5'-guanylic-L-lysine","type":"exact"},{"name":"lysine guanosine-5'-monophosphate","type":"exact"},{"name":"phospho-guanosine","type":"related"}],"termid":"MOD:00233"}


id: GO:0033163
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a microneme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme membrane","termid":"GO:0033163"}


id: FYPO:0005523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed in the reverse direction from the centromere outer repeat region are present at greater levels than normal.","definition_xrefs":["PMID:22990236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric outer repeat transcript level","termid":"FYPO:0000220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased reverse centromeric outer repeat transcript level","synonyms":[{"name":"increased accumulation of reverse centromeric outer repeat transcripts","type":"related"},{"name":"increased accumulation of reverse centromeric outer repeat transcripts during vegetative growth","type":"related"},{"name":"increased accumulation of reverse non-coding outer repeat transcripts","type":"exact"},{"name":"increased level of reverse centromeric outer repeat transcripts","type":"exact"},{"name":"increased reverse centromere outer repeat transcript level","type":"exact"},{"name":"increased reverse centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"increased reverse centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"increased reverse centromeric outer repeat-derived transcript level","type":"exact"}],"termid":"FYPO:0005523"}


id: PBO:0085512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S15A and bacterial S8; RPS22A has a paralog, RPS22B, that arose from the whole genome duplication","termid":"PBO:0085512"}


id: GO:0102263
data:
  {"annotated_genes":["SJAG_00174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111616],"is_not":false,"summary":null,"term":"GO:0102263"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil17 in tRNA + NAD(P) = H+ + a uracil17 in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0016491","GO:0003674","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"tRNA-dihydrouridine17 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12455"],"termid":"GO:0102263","terms_by_termid":{"GO:0102263":null}}


id: PBO:0116845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational activator Mtf2","termid":"PBO:0116845"}


id: PBO:0074924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 92","termid":"PBO:0074924"}


id: PBO:0065013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM16 divergent transcript","termid":"PBO:0065013"}


id: MONDO:0011581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cardioectodermal syndrome that is often associated with the gene DSP, encoding desmoplakin. Desmoplakin is a member of the plakin family of cell adhesion molecules that are responsible for the formation and maintenance of desmosomes. Variation in DSP is associated with cardiomyopathic manifestations that include: (1) seemingly isolated arrhythmogenic right ventricle cardiomyopathy (ARVC) that is atypical and can show left ventricle dominance, or be present in the left and right ventricle simultaneously; and (2) dilated cardiomyopathy. Cutaneous phenotypes including wooly hair and/or keratoderma can present along with the cardiomyopathy, but are noted as less penetrant features.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with wooly hair (obsolete MONDO:0018558)","termid":"MONDO:0018558"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"cardioectodermal syndrome","termid":"MONDO:0100080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"arrhythmogenic cardiomyopathy with wooly hair and keratoderma","secondary_identifiers":["OMIM:605676","MESH:C535581","SCTID:719835006","UMLS:C1854063","Orphanet:65282","GARD:5595","DOID:0090128","MEDGEN:340124"],"synonyms":[{"name":"Carvajal syndrome","type":"exact"},{"name":"DCWHK","type":"exact"},{"name":"KWWH type II","type":"exact"},{"name":"arrhythmogenic cardiomyopathy with wooly hair and keratoderma","type":"exact"},{"name":"cardiomyopathy dilated with woolly hair and keratoderma","type":"related"},{"name":"cardiomyopathy dilated with wooly hair and keratoderma","type":"related"},{"name":"cardiomyopathy, dilated, with woolly hair and keratoderma","type":"related"},{"name":"cardiomyopathy, dilated, with wooly hair and keratoderma","type":"related"},{"name":"dilated cardiomyopathy with woolly hair and keratoderma","type":"exact"},{"name":"dilated cardiomyopathy with wooly hair and keratoderma","type":"exact"},{"name":"epidermolytic palmoplantar keratoderma woolly hair and dilated cardiomyopathy","type":"related"},{"name":"epidermolytic palmoplantar keratoderma wooly hair and dilated cardiomyopathy","type":"related"},{"name":"keratoderma with woolly hair type II","type":"exact"},{"name":"keratoderma with wooly hair type II","type":"exact"},{"name":"palmoplantar keratoderma with left ventricular cardiomyopathy and woolly hair","type":"exact"},{"name":"palmoplantar keratoderma with left ventricular cardiomyopathy and wooly hair","type":"exact"},{"name":"woolly hair - palmoplantar keratoderma - dilated cardiomyopathy","type":"related"},{"name":"woolly hair - palmoplantar keratoderma - dilated cardiomyopathy syndrome","type":"related"},{"name":"woolly hair-palmoplantar hyperkeratosis-dilated cardiomyopathy syndrome","type":"exact"},{"name":"woolly hair-palmoplantar keratoderma-dilated cardiomyopathy syndrome","type":"exact"},{"name":"wooly hair - palmoplantar keratoderma - dilated cardiomyopathy","type":"related"},{"name":"wooly hair - palmoplantar keratoderma - dilated cardiomyopathy syndrome","type":"related"},{"name":"wooly hair-palmoplantar hyperkeratosis-dilated cardiomyopathy syndrome","type":"exact"},{"name":"wooly hair-palmoplantar keratoderma-dilated cardiomyopathy syndrome","type":"exact"}],"termid":"MONDO:0011581","xrefs":{"Monarch":{"xref_id":"0011581"}}}


id: MONDO:0014019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dystonic disorder in which the cause of the disease is a mutation in the ANO3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 24","secondary_identifiers":["UMLS:C3554374","DOID:0090052","OMIM:615034","GARD:17693","Orphanet:420485","MEDGEN:767288"],"synonyms":[{"name":"ANO3 dystonic disorder","type":"exact"},{"name":"DYT-ANO3","type":"exact"},{"name":"DYT24","type":"exact"},{"name":"cranio-cervical dystonia with laryngeal and upper-limb involvement","type":"related"},{"name":"dystonia 24","type":"exact"},{"name":"dystonia type 24","type":"exact"},{"name":"dystonic disorder caused by mutation in ANO3","type":"exact"}],"termid":"MONDO:0014019","xrefs":{"Monarch":{"xref_id":"0014019"}}}


id: PBO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounded_by","termid":"PBO:0034107"}


id: PBO:0000792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein","termid":"PBO:0000792"}


id: PBO:0082150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyltransferase; enzyme mainly responsible for the introduction of saturated very long chain fatty acids into neo-synthesized molecules of phosphatidylinositol; required for incorporation of stearic acid into phosphatidylinositol; affects chromosome stability when overexpressed; CST26 has a paralog, YDR018C, that arose from the whole genome duplication","termid":"PBO:0082150"}


id: PBO:0089066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog3","termid":"PBO:0089066"}


id: FYPO:0006130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or more microtubules does not occur during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to microtubule during meiosis","synonyms":[{"name":"abolished protein localisation to microtubule during meiosis","type":"exact"},{"name":"abolished protein localization to microtubule during meiotic nuclear division","type":"exact"},{"name":"protein absent from microtubule during meiosis","type":"related"},{"name":"protein localization to microtubule abolished during meiosis","type":"exact"}],"termid":"FYPO:0006130"}


id: FYPO:0004094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during the meiotic cell cycle. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization during meiotic cell cycle","synonyms":[{"name":"abnormal cellular protein localisation during meiotic cell cycle","type":"exact"},{"name":"abnormal cellular protein localization during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004094"}


id: PBO:0003685
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Up regulated During Septation","termid":"PBO:0003685"}


id: GO:0051792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a medium-chain fatty acid. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"medium-chain fatty acid metabolic process","termid":"GO:0051791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"medium-chain fatty acid biosynthetic process","synonyms":[{"name":"medium chain fatty acid biosynthesis","type":"exact"},{"name":"medium chain fatty acid biosynthetic process","type":"exact"},{"name":"medium-chain fatty acid anabolism","type":"exact"},{"name":"medium-chain fatty acid biosynthesis","type":"exact"},{"name":"medium-chain fatty acid formation","type":"exact"},{"name":"medium-chain fatty acid synthesis","type":"exact"}],"termid":"GO:0051792"}


id: FYPO:0000912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein ubiquitination during vegetative growth","synonyms":[{"name":"abolished protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"abolished protein ubiquitinylation during vegetative growth","type":"related"},{"name":"abolished protein ubiquitylation during vegetative growth","type":"exact"},{"name":"protein ubiquitination abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000912"}


id: PBO:0034098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-realized_in","termid":"PBO:0034098"}


id: GO:0102248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 a 1,2-diacyl-sn-glycerol = a triacyl-sn-glycerol + a 2-monoglyceride.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete diacylglycerol transacylase activity (obsolete GO:0102248)","termid":"GO:0102248"}


id: PBO:0084804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress","termid":"PBO:0084804"}


id: GO:0048691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of axon extension involved in regeneration.","definition_xrefs":["GOC:dph","GOC:jid","GOC:lm","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon extension","termid":"GO:0045773"},{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of axon extension involved in regeneration","termid":"GO:0048690"},{"relation_name":"positively_regulates","term_name":"axon extension involved in regeneration","termid":"GO:0048677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon extension involved in regeneration","synonyms":[{"name":"activation of axon extension involved in regeneration","type":"narrow"},{"name":"stimulation of axon extension involved in regeneration","type":"narrow"},{"name":"up regulation of axon extension involved in regeneration","type":"exact"},{"name":"up-regulation of axon extension involved in regeneration","type":"exact"},{"name":"upregulation of axon extension involved in regeneration","type":"exact"}],"termid":"GO:0048691"}


id: FYPO:0008296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 24-methylene lanosterol  measured in a cell is higher than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 24-methylene lanosterol level","termid":"FYPO:0008296"}


id: PBO:0066728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 25","termid":"PBO:0066728"}


id: MONDO:1011322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iatrogenic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322","xrefs":{"Monarch":{"xref_id":"1011322"}}}


id: PBO:0057883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3187","termid":"PBO:0057883"}


id: FYPO:0000777
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA repair during vegetative growth","termid":"FYPO:0000188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abnormal double-strand break repair during vegetative growth","synonyms":[{"name":"abnormal DSB repair during vegetative growth","type":"exact"},{"name":"abnormal double-strand break repair during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000777"}


id: GO:0008252
data:
  {"annotated_genes":["SJAG_03096","SJAG_01702","SJAG_02582","SJAG_02959","SJAG_03276","SJAG_01055","SJAG_02593","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008441"},{"annotations":[119186,92493,71802,115708,92261,96305,115707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008253"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleotide + H2O = a nucleoside + phosphate.","definition_xrefs":["RHEA:22140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01702":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02593":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NSP I","type":"related"},{"name":"NSP II","type":"related"},{"name":"acid nucleotidase activity","type":"related"},{"name":"deoxyinosine-activated nucleotidase (DIAN)","type":"related"},{"name":"deoxyribonucleoside-activated nucleotidase (DAN)","type":"related"},{"name":"nucleotide phosphohydrolase activity","type":"related"},{"name":"nucleotide-specific phosphatase activity","type":"related"}],"termid":"GO:0008252","terms_by_termid":{"GO:0008253":null,"GO:0008441":null}}


id: GO:0018207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-phenylalanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-phenylalanine modification","termid":"GO:0018207"}


id: PBO:0083358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene REV1; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2","termid":"PBO:0083358"}


id: PBO:0076305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2 pseudogene 1","termid":"PBO:0076305"}


id: PR:Q96UP3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96UP3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere length regulator protein rif1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.17","synonyms":[{"name":"Spom972h-rif1","type":"exact"}],"termid":"PR:Q96UP3"}


id: MONDO:0003291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the arrector pili muscle, tunica media of blood vessels, and dartos muscle of the genitalia. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"leiomyoma cutis","secondary_identifiers":["UMLS:C0346064","MEDGEN:87533","NCIT:C4482","SCTID:254767008","DOID:5132"],"synonyms":[{"name":"cutaneous (skin) leiomyoma","type":"exact"},{"name":"cutaneous leiomyoma","type":"exact"},{"name":"leiomyoma cutis","type":"exact"},{"name":"leiomyoma of skin","type":"exact"},{"name":"leiomyoma of the skin","type":"exact"},{"name":"leiomyoma of zone of skin","type":"exact"},{"name":"skin leiomyoma","type":"exact"},{"name":"zone of skin leiomyoma","type":"exact"}],"termid":"MONDO:0003291","xrefs":{"Monarch":{"xref_id":"0003291"}}}


id: PBO:0115007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein involved in respiratory complex assembly Cmc2","termid":"PBO:0115007"}


id: GO:0010954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of protein maturation by peptide bond cleavage.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteolysis","termid":"GO:0045862"},{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"positively_regulates","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"positive regulation of protein processing","synonyms":[{"name":"positive regulation of protein maturation by peptide bond cleavage","type":"exact"}],"termid":"GO:0010954"}


id: SO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a U.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000917 insert_U (obsolete SO:0000917)","synonyms":[{"name":"insert U","type":"exact"}],"termid":"SO:0000917"}


id: GO:0098922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the dense core granule membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"dense core granule membrane","termid":"GO:0032127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of dense core granule membrane","termid":"GO:0098922"}


id: SO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Edited mRNA sequence mediated by a single guide RNA (SO:0000602).","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_block","synonyms":[{"name":"editing block","type":"exact"}],"termid":"SO:0000604"}


id: PBO:0064339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDX1 associated lncRNA, upregulator of transcription","termid":"PBO:0064339"}


id: GO:0061560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a cranial ganglion. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion formation","termid":"GO:0061554"},{"relation_name":"part_of","term_name":"cranial ganglion morphogenesis","termid":"GO:0061559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion formation","synonyms":[{"name":"cranial ganglia formation","type":"related"}],"termid":"GO:0061560"}


id: MONDO:0054861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 63","secondary_identifiers":["GARD:16475","UMLS:C4748167","DOID:0081224","MEDGEN:1648348","OMIM:618095"],"synonyms":[{"name":"MRT63","type":"related"},{"name":"intellectual disability, autosomal recessive 63","type":"exact"},{"name":"mental retardation, autosomal recessive 63","type":"related"}],"termid":"MONDO:0054861","xrefs":{"Monarch":{"xref_id":"0054861"}}}


id: PBO:0087623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CSN and 26S proteasome lid complexes; similar to mammalian p55 subunit and to another S. cerevisiae regulatory subunit, Rpn7p; Rpn5p is an essential protein; the COP9 signalosome is also known as the CSN","termid":"PBO:0087623"}


id: PBO:0004543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc4","termid":"PBO:0004543"}


id: PBO:0055560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2996","termid":"PBO:0055560"}


id: FYPO:0007854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during anaphase of meiosis I.","definition_xrefs":["PMID:11331883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during meiosis I","termid":"FYPO:0004214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to kinetochore during meiotic anaphase I","synonyms":[{"name":"normal protein localisation to kinetochore during meiotic anaphase I","type":"exact"},{"name":"normal protein localization to kinetochore during meiosis I anaphase","type":"exact"}],"termid":"FYPO:0007854"}


id: MONDO:0033850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of copper metabolism","termid":"MONDO:0017762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive axonal charcot-marie-tooth disease due to copper metabolism defect","secondary_identifiers":["MEDGEN:1800474","GARD:22143","Orphanet:521411","UMLS:C5569051"],"termid":"MONDO:0033850","xrefs":{"Monarch":{"xref_id":"0033850"}}}


id: GO:0018925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving m-cresol (3-hydroxytoluene), the meta-isoform of cresol. Used to produce agricultural chemicals, and in specialty resins, pharmaceuticals and pressure-sensitive dyes.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete m-cresol metabolic process (obsolete GO:0018925)","synonyms":[{"name":"3-hydroxytoluene metabolic process","type":"exact"},{"name":"3-hydroxytoluene metabolism","type":"exact"},{"name":"m-cresol metabolism","type":"exact"},{"name":"meta-cresol metabolic process","type":"exact"},{"name":"meta-cresol metabolism","type":"exact"}],"termid":"GO:0018925"}


id: PR:Q09849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arp42 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit arp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.09","synonyms":[{"name":"Spom972h-arp42","type":"exact"},{"name":"actin-related protein 42 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"chromatin structure-remodeling complex subunit arp42 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09849"}


id: PBO:0081012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 46","termid":"PBO:0081012"}


id: GO:0019310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol metabolic process","termid":"GO:0006020"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inositol catabolic process","secondary_identifiers":["MetaCyc:P562-PWY"],"synonyms":[{"name":"inositol breakdown","type":"exact"},{"name":"inositol catabolism","type":"exact"},{"name":"inositol degradation","type":"exact"},{"name":"myo-inositol catabolic process","type":"narrow"},{"name":"myo-inositol catabolism","type":"narrow"},{"name":"vitamin Bh catabolic process","type":"exact"},{"name":"vitamin Bh catabolism","type":"exact"}],"termid":"GO:0019310"}


id: GO:1901449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to butan-1-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"is_a","term_name":"regulation of response to butan-1-ol","termid":"GO:1901448"},{"relation_name":"negatively_regulates","term_name":"response to butan-1-ol","termid":"GO:1901422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to butan-1-ol","synonyms":[{"name":"down regulation of response to butan-1-ol","type":"exact"},{"name":"down-regulation of response to butan-1-ol","type":"exact"},{"name":"downregulation of response to butan-1-ol","type":"exact"},{"name":"inhibition of response to butan-1-ol","type":"narrow"}],"termid":"GO:1901449"}


id: MONDO:0003740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An overwhelming, irrational, and persistent fear of contracting Acquired Immune Deficiency Syndrome.","definition_xrefs":["NCIT:C35614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nosophobia","termid":"MONDO:0000600"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDS phobia","secondary_identifiers":["DOID:603","MEDGEN:167692","UMLS:C0853870"],"synonyms":[{"name":"AIDS phobia","type":"exact"}],"termid":"MONDO:0003740","xrefs":{"Monarch":{"xref_id":"0003740"}}}


id: PATO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-D extent","synonyms":[{"name":"1-D size","type":"exact"}],"termid":"PATO:0001708"}


id: GO:0070593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which dendrites recognize and avoid contact with sister dendrites from the same cell.","definition_xrefs":["GOC:sart","PMID:17482551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite self-avoidance","synonyms":[{"name":"dendrite repulsion","type":"exact"}],"termid":"GO:0070593"}


id: PBO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substrate_is","termid":"PBO:0000015"}


id: GO:0010918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or extent of a mitochondrial membrane potential, the electric potential existing across any mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of membrane potential","termid":"GO:0045838"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial membrane potential","synonyms":[{"name":"elevation of mitochondrial membrane potential","type":"exact"}],"termid":"GO:0010918"}


id: MONDO:0015097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital aortic valve stenosis","termid":"MONDO:0017735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve dysplasia","secondary_identifiers":["ICD9:746.89","SCTID:253604004","MEDGEN:576679","UMLS:C0344993","Orphanet:101043","GARD:19776"],"termid":"MONDO:0015097","xrefs":{"Monarch":{"xref_id":"0015097"}}}


id: MONDO:0022465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by anotia (congenital absence of the pinna) with a normal cochlea and vestibular apparatus, with facial paralysis caused by congenital absence of the entire right facial nerve, and congenital heart disease, which may present as atrioventricular septal defects or variations of tetralogy of Fallot.","definition_xrefs":["PMID:6470867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anotia facial palsy cardiac defect","termid":"MONDO:0022465","xrefs":{"Monarch":{"xref_id":"0022465"}}}


id: GO:0046182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-idonate, the anion of idonic acid, an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"aldonic acid biosynthetic process","termid":"GO:0046175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"L-idonate biosynthetic process","synonyms":[{"name":"L-idonate anabolism","type":"exact"},{"name":"L-idonate biosynthesis","type":"exact"},{"name":"L-idonate formation","type":"exact"},{"name":"L-idonate synthesis","type":"exact"}],"termid":"GO:0046182"}


id: PATO:0000262
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000262 visual placing (obsolete PATO:0000262)","termid":"PATO:0000262"}


id: PBO:0062299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 10","termid":"PBO:0062299"}


id: FYPO:0004748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a lower extent than normal in regions of pericentric heterochromatin. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["GO:0043486","PMID:24095277","GO:0005721","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"decreased protein exchange at pericentric heterochromatin","termid":"FYPO:0006359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone exchange at pericentric heterochromatin","synonyms":[{"name":"decreased histone exchange at centromeric heterochromatin","type":"exact"},{"name":"decreased histone exchange at dh repeat","type":"narrow"},{"name":"decreased histone exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone exchange at pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone exchange at pericentric heterochromatin","type":"exact"}],"termid":"FYPO:0004748"}


id: PBO:0070829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 8","termid":"PBO:0070829"}


id: GO:0052357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall pectin (obsolete GO:0052357)","termid":"GO:0052357"}


id: MOD:02057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-tryptophan residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-tryptophan residue","synonyms":[{"name":"XlnkTrp","type":"exact"}],"termid":"MOD:02057"}


id: GO:0016571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of methyl groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone methylation (obsolete GO:0016571)","secondary_identifiers":["Wikipedia:Histone_methylation"],"termid":"GO:0016571"}


id: MONDO:0019534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mixed autoimmune hemolytic anemia is a type of autoimmune hemolytic anemia (AIHA) defined by the presence of both warm and cold autoantibodies, which have a deleterious effect on red blood cells at either body temperature or at lower temperatures.","definition_xrefs":["Orphanet:90036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0002280"],"is_obsolete":false,"name":"mixed-type autoimmune hemolytic anemia","secondary_identifiers":["NANDO:1200309","GARD:19101","SCTID:718716008","MEDGEN:930926","UMLS:C4305257","icd11.foundation:1878239449"],"synonyms":[{"name":"mixed AIHA","type":"exact"}],"termid":"MONDO:0019534","xrefs":{"Monarch":{"xref_id":"0019534"}}}


id: PBO:0120223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome assembly protein Rsa3","termid":"PBO:0120223"}


id: PBO:0003754
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae STE11","termid":"PBO:0003754"}


id: GO:0044317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized neuron projection which is the site of synaptic transmission produced by retinal rod cells. Rod spherules are small round enlargements of the axon (3-5 micrometers diameter) or even extensions of the cell body.","definition_xrefs":["PMID:26930660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod spherule","synonyms":[{"name":"rod cell spherule","type":"exact"},{"name":"rod photoreceptor spherule","type":"exact"}],"termid":"GO:0044317"}


id: GO:0047024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-androstane-3-beta,17-beta-diol + NADP+ = 17-beta-hydroxy-5-alpha-androstan-3-one + H+ + NADPH.","definition_xrefs":["RHEA:16297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"5-alpha-androstane-3-beta,17-beta-diol dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R04344","MetaCyc:1.1.1.210-RXN","EC:1.1.1.210"],"synonyms":[{"name":"3-beta(or 20-alpha)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3-beta-HSD activity","type":"related"},{"name":"3beta(or 20alpha)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3beta(or 20alpha)-hydroxysteroid:NADP+ oxidoreductase activity","type":"broad"},{"name":"3beta,20alpha-hydroxysteroid oxidoreductase activity","type":"broad"},{"name":"5alpha-androstane-3beta,17beta-diol dehydrogenase activity","type":"exact"},{"name":"dehydrogenase, 3beta,20alpha-hydroxy steroid","type":"broad"},{"name":"progesterone reductase activity","type":"related"}],"termid":"GO:0047024"}


id: PBO:0027409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027409"}


id: PBO:0043255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 14","termid":"PBO:0043255"}


id: PBO:0079309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 4B","termid":"PBO:0079309"}


id: MONDO:0019845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired pituitary hormone deficiency","termid":"MONDO:0019832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic or traumatic pituitary deficiency","secondary_identifiers":["GARD:19290","UMLS:C0342400","MEDGEN:575005","Orphanet:95619"],"termid":"MONDO:0019845","xrefs":{"Monarch":{"xref_id":"0019845"}}}


id: MOD:01941
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)pentanedioic acid and the loss of a water molecule.","definition_xrefs":["RESID:AA0593#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)pentanedioic acid","termid":"MOD:01946"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)pentanedioic acid (Asp)","synonyms":[{"name":"(4S)-4-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-5-oxopentanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)pentanedioic acid","type":"exact"},{"name":"aspartimide glutamic acid","type":"exact"}],"termid":"MOD:01941"}


id: PBO:0051896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 5","termid":"PBO:0051896"}


id: PBO:0082205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; responsible for addition of the second alpha-1,2-linked mannose of the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment","termid":"PBO:0082205"}


id: GO:0044457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cell septum, a structure composed of peptidoglycan and often chitin in addition to other materials. It usually forms perpendicular to the long axis of a cell or hypha and grows centripetally from the cell wall to the center of the cell and often functions in the compartmentalization of a cell into two daughter cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell septum part (obsolete GO:0044457)","termid":"GO:0044457"}


id: GO:0070689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form the compound propionate.","definition_xrefs":["GOC:bf","GOC:mah","MetaCyc:PWY-5437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-threonine catabolic process","termid":"GO:0006567"},{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0006520"],"is_obsolete":false,"name":"L-threonine catabolic process to propionate","synonyms":[{"name":"L-threonine breakdown to propionate","type":"exact"},{"name":"L-threonine catabolism to propionate","type":"exact"},{"name":"L-threonine degradation to propionate","type":"exact"},{"name":"threonine catabolic process to propionate","type":"broad"}],"termid":"GO:0070689"}


id: PBO:0048488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage system protein H","termid":"PBO:0048488"}


id: PBO:0081905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 862","termid":"PBO:0081905"}


id: GO:0030945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The catalysis of phosphate removal from a phosphotyrosine using cysteine as a nucleophile and proceed by means of a thiol-phosphate intermediate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete protein tyrosine phosphatase activity, via thiol-phosphate intermediate (obsolete GO:0030945)","termid":"GO:0030945"}


id: GO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.","definition_xrefs":["ISBN:0781735149","PMID:15531770","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002495"}


id: PBO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk8 (predicted)","termid":"PBO:0000572"}


id: FYPO:0002778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of sumoylation of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein sumoylation during vegetative growth","termid":"FYPO:0002777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein sumoylation during vegetative growth","synonyms":[{"name":"decreased protein sumolation during vegetative growth","type":"exact"},{"name":"decreased protein sumoylation during mitotic cell cycle","type":"related"},{"name":"reduced protein sumoylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002778"}


id: MONDO:0013774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated trigonocephaly in which the cause of the disease is a mutation in the FREM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated trigonocephaly","termid":"MONDO:0018065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"trigonocephaly 2","secondary_identifiers":["UMLS:C3280974","GARD:18559","MEDGEN:482604","OMIM:614485"],"synonyms":[{"name":"FREM1 isolated trigonocephaly","type":"exact"},{"name":"TRIGNO2","type":"related"},{"name":"craniosynostosis, metopic","type":"related"},{"name":"isolated trigonocephaly caused by mutation in FREM1","type":"exact"},{"name":"trigonocephaly 2","type":"exact"},{"name":"trigonocephaly type 2","type":"exact"}],"termid":"MONDO:0013774","xrefs":{"Monarch":{"xref_id":"0013774"}}}


id: GO:0060819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by genomic imprinting.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of X chromosome by genomic imprinting (obsolete GO:0060819)","synonyms":[{"name":"inactivation of X chromosome by genetic imprinting","type":"related"}],"termid":"GO:0060819"}


id: MONDO:0100578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"FANCM Fanconi-like genomic instability disorder is autosomal recessive condition associated with an increased risk of cancer, infertility, and hypersensitivity to cytotoxic agents.","direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi-like syndrome","termid":"MONDO:0009217"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCM Fanconi-like genomic instability disorder","termid":"MONDO:0100578","xrefs":{"Monarch":{"xref_id":"0100578"}}}


id: PBO:0085717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Snd1p, Pho88p/Snd3p and Sec61p-translocon subunits; can compensate for loss of SRP; role in the late endosome-vacuole interface; putative role in secretory protein quality control","termid":"PBO:0085717"}


id: PR:O13994
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kei1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phoshorylceramide synthase regulatory subunit kei1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.13c","synonyms":[{"name":"ICP synthase regulatory subunit kei1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-kei1","type":"exact"}],"termid":"PR:O13994"}


id: MONDO:0030033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizures, early-onset, with neurodegeneration and brain calcifications","secondary_identifiers":["MEDGEN:1713658","UMLS:C5394359","OMIM:618875"],"synonyms":[{"name":"SEIZURES, EARLY-ONSET, WITH NEURODEGENERATION AND BRAIN CALCIFICATIONS","type":"exact"},{"name":"SENEBAC","type":"exact"},{"name":"seizures, early-onset, with neurodegeneration and brain calcification","type":"exact"},{"name":"seizures, early-onset, with neurodegeneration and brain calcifications","type":"exact"}],"termid":"MONDO:0030033","xrefs":{"Monarch":{"xref_id":"0030033"}}}


id: PBO:0053536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 538","termid":"PBO:0053536"}


id: PBO:0066345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 7","termid":"PBO:0066345"}


id: MONDO:1011427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, non-human animal","secondary_identifiers":["OMIA:001993"],"termid":"MONDO:1011427","xrefs":{"Monarch":{"xref_id":"1011427"}}}


id: PBO:0062805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 5","termid":"PBO:0062805"}


id: PBO:0083313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF COA1/YIL157C","termid":"PBO:0083313"}


id: MONDO:0020240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A retinitis pigmentosa that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","secondary_identifiers":["Orphanet:98661"],"synonyms":[{"name":"syndrome associated with retinitis pigmentosa","type":"exact"},{"name":"syndromic retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0020240","xrefs":{"Monarch":{"xref_id":"0020240"}}}


id: MONDO:0001565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"binocular vision disease","termid":"MONDO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal retinal correspondence","secondary_identifiers":["ICD10CM:H53.31","UMLS:C0155010","icd11.foundation:119512999","DOID:12668","ICD9:368.34","MEDGEN:509763","SCTID:79195003"],"termid":"MONDO:0001565","xrefs":{"Monarch":{"xref_id":"0001565"}}}


id: PBO:0044178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin beta interacting protein 1","termid":"PBO:0044178"}


id: GO:0003110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of norepinephrine from nerve endings modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by neuronal norepinephrine","synonyms":[{"name":"increased force of heart contraction by neuronal noradrenaline","type":"related"},{"name":"increased force of heart contraction by neuronal norepinephrine","type":"exact"}],"termid":"GO:0003110"}


id: PBO:0054889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2303","termid":"PBO:0054889"}


id: FYPO:0007842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah","PMID:34019809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"abolished NAT activity","type":"related"},{"name":"abolished protein N-terminal acetyltransferase activity","type":"exact"},{"name":"peptide alpha-N-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007842"}


id: GO:0032937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of sterol regulatory element binding protein (SREBP), SREBP-cleavage-activating protein (SCAP), and an Insig protein (Insig-1 or Insig-2) in the ER membrane.","definition_xrefs":["PMID:12923525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0032991","GO:0005783","GO:0005737","GO:0005575","GO:0005789"],"is_obsolete":false,"name":"SREBP-SCAP-Insig complex","termid":"GO:0032937"}


id: GO:0052137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in host (obsolete GO:0052137)","synonyms":[{"name":"aerotaxis within host","type":"exact"}],"termid":"GO:0052137"}


id: MONDO:0006902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete periventricular leukomalacia (obsolete MONDO:0006902)","termid":"MONDO:0006902","xrefs":{"Monarch":{"xref_id":"0006902"}}}


id: PBO:0044385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7 pseudogene 2","termid":"PBO:0044385"}


id: MONDO:0001278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A syndrome characterized by progressive life-threatening RESPIRATORY INSUFFICIENCY in the absence of known LUNG DISEASES, usually following a systemic insult such as surgery or major TRAUMA.","definition_xrefs":["MESH:D012128"],"gene_count":0,"genotype_count":0,"name":"obsolete adult respiratory distress syndrome (obsolete MONDO:0001278)","termid":"MONDO:0001278","xrefs":{"Monarch":{"xref_id":"0001278"}}}


id: GO:1905339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cohesin unloading.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26687354"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cohesin unloading (obsolete GO:1905339)","synonyms":[{"name":"activation of cohesin unloading","type":"narrow"},{"name":"up regulation of cohesin unloading","type":"exact"},{"name":"up-regulation of cohesin unloading","type":"exact"},{"name":"upregulation of cohesin unloading","type":"exact"}],"termid":"GO:1905339"}


id: PBO:0117422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 17","termid":"PBO:0117422"}


id: PBO:0073887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 4","termid":"PBO:0073887"}


id: PBO:0047772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box B1","termid":"PBO:0047772"}


id: PBO:0056433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 6","termid":"PBO:0056433"}


id: GO:0042780
data:
  {"annotated_genes":["SJAG_00195","SJAG_02288","SJAG_03761","SJAG_01704","SJAG_00997","SJAG_02993","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94973,100428,100894],"is_not":false,"summary":null,"term":"GO:0042780"},{"annotations":[82278,89681,71959,119926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[72221,76717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001680"}]},"cv_name":"biological_process","definition":"The process in which the 3' end of a pre-tRNA molecule is converted to that of a mature tRNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02993":null,"SJAG_03761":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tRNA 3' processing","type":"exact"}],"termid":"GO:0042780","terms_by_termid":{"GO:0001680":null,"GO:0042780":null,"GO:1990180":null}}


id: GO:1902925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate) from fatty acid.","definition_xrefs":["PMID:21129764","GOC:TermGenie","GO_REF:0000092","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) biosynthetic process from fatty acid","synonyms":[{"name":"poly(hydroxyalkanoate) anabolism from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) biosynthesis from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) formation from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) synthesis from fatty acid","type":"exact"}],"termid":"GO:1902925"}


id: MONDO:0004651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that is caused by infection with Variola, and that is characterized by small, raised bumps.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smallpox","secondary_identifiers":["ICD10CM:B03","ICD10WHO:B03","MEDGEN:20785","UMLS:C0037354","DOID:8736","icd11.foundation:2054716425","ICD9:050","NCIT:C35027","ICD9:050.9","MESH:D012899","SCTID:67924001"],"synonyms":[{"name":"Variola","type":"related"},{"name":"Variola virus caused disease or disorder","type":"exact"},{"name":"Variola virus disease or disorder","type":"exact"},{"name":"Variola virus infectious disease","type":"exact"},{"name":"ordinary smallpox","type":"exact"},{"name":"smallpox virus infection","type":"related"},{"name":"variola virus VAR infection","type":"related"},{"name":"variola virus infection","type":"related"}],"termid":"MONDO:0004651","xrefs":{"Monarch":{"xref_id":"0004651"}}}


id: FYPO:0004370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of cadmium ions into the vacuole occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0036249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cadmium ion import into vacuole","synonyms":[{"name":"decreased cadmium import into vacuole","type":"exact"},{"name":"decreased cadmium ion import into vacuole during mitotic cell cycle","type":"related"},{"name":"decreased cadmium ion import into vacuole during vegetative growth","type":"exact"},{"name":"reduced cadmium ion import into vacuole","type":"exact"}],"termid":"FYPO:0004370"}


id: GO:0015429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal fatty acyl transporter (obsolete GO:0015429)","synonyms":[{"name":"peroxisomal fatty acyl transporter","type":"exact"}],"termid":"GO:0015429"}


id: PBO:0040793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone gamma-carboxyglutamate protein","termid":"PBO:0040793"}


id: GO:0140355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a cargo receptor and initiates endocytosis.","definition_xrefs":["PMID:15797858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cargo receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-3000074","Reactome:R-HSA-3132759","Reactome:R-HSA-3000120"],"synonyms":[{"name":"cargo","type":"related"}],"termid":"GO:0140355"}


id: PBO:0053149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 5","termid":"PBO:0053149"}


id: GO:0102866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (8Z,11Z,14Z)-icosatrienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (5Z,8Z,11Z,14Z)-eicosatetraenoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O. Also converts an (8Z,11Z,14Z,17Z)-eicosatetraenoyl-containing glycerolipid into a (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-containing glycerolipid.","definition_xrefs":["EC:1.14.19.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acyl-lipid (8-3)-desaturase activity","synonyms":[{"name":"Delta(5)-fatty-acid desaturase activity","type":"exact"},{"name":"acyl-lipid 5-desaturase activity","type":"related"},{"name":"di-homo-gamma-linolenate delta5 desaturase activity","type":"related"}],"termid":"GO:0102866"}


id: PBO:0073373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTAD4 antisense RNA 1","termid":"PBO:0073373"}


id: GO:1904726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:23496142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of replicative senescence","termid":"GO:1904726"}


id: GO:0044271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic and inorganic nitrogenous compounds.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular nitrogen compound biosynthetic process (obsolete GO:0044271)","termid":"GO:0044271"}


id: GO:0001717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of serine, carried by a specialized tRNA(ser) (which can read a UGA anticodon), to selenocysteine.","definition_xrefs":["ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"conversion of seryl-tRNAsec to selenocys-tRNAsec","termid":"GO:0001717"}


id: PBO:0062056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 3","termid":"PBO:0062056"}


id: PBO:0062660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 1","termid":"PBO:0062660"}


id: GO:0140033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon acetylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"acetylation-dependent protein binding","termid":"GO:0140033"}


id: MONDO:0010364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-retinitis pigmentosa syndrome is characterized by moderate intellectual deficit and severe, early-onset retinitis pigmentosa. It has been described in five males spanning three generations of one family. Some patients also had microcephaly. It is transmitted as an X-linked recessive trait.","definition_xrefs":["Orphanet:85332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome X","termid":"MONDO:0017004"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-retinitis pigmentosa syndrome","secondary_identifiers":["MEDGEN:336862","GARD:8360","OMIM:300578","SCTID:719808002","UMLS:C1845136","ICD10CM:H35.5"],"synonyms":[{"name":"Aldred syndrome","type":"exact"},{"name":"X-linked mental handicap-retinitis pigmentosa syndrome","type":"related"},{"name":"chromosome Xp11.3 deletion syndrome","type":"related"},{"name":"chromosome xp11.3 deletion syndrome, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, with retinitis pigmentosa","type":"related"},{"name":"mental retardation, X-linked, with retinitis pigmentosa","type":"related"},{"name":"nonspecific intellectual disability associated with retinitis pigmentosa","type":"related"},{"name":"nonspecific mental retardation associated with retinitis pigmentosa","type":"related"},{"name":"retinitis pigmentosa and intellectual disability due to Xp11.3 microdeletion","type":"exact"},{"name":"retinitis pigmentosa and intellectual disability due to del(X)(p11.3)","type":"exact"},{"name":"retinitis pigmentosa and intellectual disability due to monosomy Xp11.3","type":"exact"}],"termid":"MONDO:0010364","xrefs":{"Monarch":{"xref_id":"0010364"}}}


id: GO:0099558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that preserves the structural organistation and orientation of a synaptic cellular component such as the synaptic cytoskeleton and molecular scaffolds.","definition_xrefs":["PMID:25611509","PMID:24449494","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction maintenance","termid":"GO:0034331"},{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of synapse structure","synonyms":[{"name":"synaptic maintenance","type":"exact"}],"termid":"GO:0099558"}


id: MONDO:0009081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"deafness, congenital, with total albinism","secondary_identifiers":["MEDGEN:387799","MESH:C565646","OMIM:220900","UMLS:C1857343"],"synonyms":[{"name":"deafness, congenital, with total albinism","type":"exact"}],"termid":"MONDO:0009081","xrefs":{"Monarch":{"xref_id":"0009081"}}}


id: PBO:0027666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere_inner_repeat","termid":"PBO:0027666"}


id: PBO:0044914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGAT2 divergent transcript","termid":"PBO:0044914"}


id: GO:0047462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + ATP + H2O = D-phenylalanine + AMP + diphosphate + 2 H+.","definition_xrefs":["EC:5.1.1.11","RHEA:20201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylalanine racemase (ATP-hydrolyzing) activity","secondary_identifiers":["KEGG_REACTION:R00686","MetaCyc:5.1.1.11-RXN"],"synonyms":[{"name":"gramicidin S synthetase I","type":"related"},{"name":"phenylalanine racemase (ATP-hydrolysing)","type":"broad"},{"name":"phenylalanine racemase (adenosine triphosphate-hydrolysing)","type":"related"},{"name":"phenylalanine racemase activity","type":"related"}],"termid":"GO:0047462"}


id: PR:Q09176
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uaf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor U2AF 23 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.06","synonyms":[{"name":"Spom972h-uaf2","type":"exact"},{"name":"U2 auxiliary factor 23 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U2 snRNP auxiliary factor small subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U2AF23 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09176"}


id: GO:1902952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic spine maintenance.","definition_xrefs":["GO_REF:0000058","GOC:sjp","GOC:TermGenie","PMID:24328732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of dendritic spine maintenance","termid":"GO:1902950"},{"relation_name":"positively_regulates","term_name":"dendritic spine maintenance","termid":"GO:0097062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic spine maintenance","synonyms":[{"name":"activation of dendritic spine maintenance","type":"narrow"},{"name":"up regulation of dendritic spine maintenance","type":"exact"},{"name":"up-regulation of dendritic spine maintenance","type":"exact"},{"name":"upregulation of dendritic spine maintenance","type":"exact"}],"termid":"GO:1902952"}


id: PBO:0002392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 regulator Dap1","termid":"PBO:0002392"}


id: MOD:01136
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate","termid":"MOD:01136"}


id: PBO:0045468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5","termid":"PBO:0045468"}


id: MONDO:1012569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular fibrinogen storage disease, non-human animal","termid":"MONDO:1011782"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular fibrinogen storage disease, cattle","secondary_identifiers":["OMIA:002582-9913"],"termid":"MONDO:1012569","xrefs":{"Monarch":{"xref_id":"1012569"}}}


id: PBO:0054544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1944","termid":"PBO:0054544"}


id: PR:O13772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A5.10 gene.","definition_xrefs":["UniProtKB:O13772","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline/serine-rich protein C17A5.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.10","synonyms":[{"name":"Spom972h-SPAC17A5.10","type":"exact"}],"termid":"PR:O13772"}


id: PBO:0052899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-10","termid":"PBO:0052899"}


id: GO:0031496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating type switching.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating type switching","termid":"GO:0031494"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mating type switching","synonyms":[{"name":"activation of mating type switching","type":"narrow"},{"name":"stimulation of mating type switching","type":"narrow"},{"name":"up regulation of mating type switching","type":"exact"},{"name":"up-regulation of mating type switching","type":"exact"},{"name":"upregulation of mating type switching","type":"exact"}],"termid":"GO:0031496"}


id: PBO:0086545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR102C is not an essential gene; homozygous diploid deletion strain exhibits high budding index","termid":"PBO:0086545"}


id: PBO:0071610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 28","termid":"PBO:0071610"}


id: MONDO:0000831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The formation of a blood clot in the lumen of a vessel or heart chamber; causes include coagulation disorders and vascular endothelial injury.","definition_xrefs":["NCIT:C26891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombotic disease","secondary_identifiers":["MEDGEN:21160","DOID:0060903","SCTID:439127006","ICD9:453.9","MESH:D013927","UMLS:C0040053"],"synonyms":[{"name":"Clots, blood","type":"exact"},{"name":"Thromboses","type":"exact"},{"name":"blood Clots","type":"exact"},{"name":"blood clot","type":"exact"},{"name":"clot, blood","type":"exact"},{"name":"thrombosis","type":"exact"},{"name":"thrombotic disorder","type":"exact"},{"name":"thrombus","type":"exact"}],"termid":"MONDO:0000831","xrefs":{"Monarch":{"xref_id":"0000831"}}}


id: MONDO:0011829
data:
  {"annotated_genes":["SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88369],"is_not":false,"summary":null,"term":"MONDO:0011829"}]},"cv_name":"mondo","definition":"Any coenzyme Q10 deficiency in which the cause of the disease is a mutation in the COQ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"coenzyme Q10 deficiency, primary, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:607426","GARD:18378","UMLS:C3551954","DOID:0070238","MEDGEN:764868"],"synonyms":[{"name":"COQ10D1","type":"related"},{"name":"COQ2 coenzyme Q10 deficiency","type":"exact"},{"name":"CoQ deficiency 1","type":"related"},{"name":"Coq10 deficiency, primary, 1","type":"related"},{"name":"coenzyme Q deficiency 1","type":"related"},{"name":"coenzyme Q10 deficiency caused by mutation in COQ2","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, 1","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, type 1","type":"exact"},{"name":"ubiquinone deficiency 1","type":"related"}],"termid":"MONDO:0011829","terms_by_termid":{"MONDO:0011829":null},"xrefs":{"Monarch":{"xref_id":"0011829"}}}


id: GO:1900288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900288"}


id: GO:0106303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannogen, a mannose-containing polysaccharide that is a major energy reserve in Leishmania.","definition_xrefs":["PMID:31662278","PMID:16766650","PMID:31513773","PMID:12902334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannogen metabolic process","synonyms":[{"name":"beta-1,2-mannan metabolic process","type":"related"},{"name":"mannogen metabolism","type":"related"}],"termid":"GO:0106303"}


id: PBO:0077738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenascin XA (pseudogene)","termid":"PBO:0077738"}


id: PBO:0079876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 3","termid":"PBO:0079876"}


id: PBO:0029020
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_mitotic_M_phase","termid":"PBO:0029020"}


id: PBO:0080006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 pseudogene 1","termid":"PBO:0080006"}


id: PBO:0016105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase Qns1 (predicted)","termid":"PBO:0016105"}


id: GO:0004869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cysteine-type endopeptidase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0030234","GO:0004857","GO:0098772"],"is_obsolete":false,"name":"cysteine-type endopeptidase inhibitor activity","secondary_identifiers":["GO:0004870"],"synonyms":[{"name":"cystatin","type":"narrow"},{"name":"cysteine protease inhibitor activity","type":"narrow"},{"name":"thiol protease inhibitor","type":"narrow"}],"termid":"GO:0004869"}


id: PBO:0066777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 75","termid":"PBO:0066777"}


id: MONDO:0014410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 37 (SCA37) is a subtype of autosomal dominant cerebellar ataxia type 1 (ADCA type 1), characterized by a cerebellar syndrome along with altered vertical eye movements.","definition_xrefs":["Orphanet:363710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 37","secondary_identifiers":["DOID:0050984","MEDGEN:855217","OMIM:615945","SCTID:719301002","GARD:12368","UMLS:C3889636"],"synonyms":[{"name":"SCA37","type":"exact"},{"name":"spinocerebellar ataxia 37","type":"related"},{"name":"spinocerebellar ataxia with altered vertical eye movements","type":"exact"}],"termid":"MONDO:0014410","xrefs":{"Monarch":{"xref_id":"0014410"}}}


id: PBO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer","termid":"PBO:0025453"}


id: GO:0031368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Pro-Xaa bond by a metallopeptidase mechanism to release a C-terminal amino acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Pro-X metallocarboxypeptidase activity (obsolete GO:0031368)","synonyms":[{"name":"Pro-X metallocarboxypeptidase activity","type":"exact"}],"termid":"GO:0031368"}


id: PBO:0072226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 1","termid":"PBO:0072226"}


id: PBO:0063700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase","termid":"PBO:0063700"}


id: PBO:0091165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-classical export protein Nce101","termid":"PBO:0091165"}


id: GO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 3-sulfino-L-alanine (cysteinesulfinate) (out) + H+(in) + L-glutamate(in) = 3-sulfino-L-alanine(in) + H+(out) + L-glutamate(out).","definition_xrefs":["RHEA:70967","PMID:11566871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"3-sulfino-L-alanine: proton, glutamate antiporter activity","termid":"GO:0000514"}


id: PBO:0029166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation","termid":"PBO:0029166"}


id: MONDO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adenoma of ovary","definition_xrefs":["EFO:0002507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian adenoma benign","termid":"MONDO:0005179","xrefs":{"Monarch":{"xref_id":"0005179"}}}


id: MOD:00871
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with (2)H5-phenyl isocyanate.","definition_xrefs":["Unimod:412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenyl isocyanate derivatized residue","termid":"MOD:00870"},{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2)H5-phenyl isocyanate derivatized residue","synonyms":[{"name":"Phenylisocyanate:2H(5)","type":"related"},{"name":"d5-phenyl isocyanate","type":"related"}],"termid":"MOD:00871"}


id: PBO:0085946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; not an essential gene; YLR413W has a paralog, FAT3, that arose from the whole genome duplication","termid":"PBO:0085946"}


id: PBO:0045530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTX2 pseudogene 1","termid":"PBO:0045530"}


id: MONDO:0021244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the submandibular gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"submandibular gland disorder","termid":"MONDO:0001597"},{"relation_name":"is_a","term_name":"neoplasm of major salivary gland","termid":"MONDO:0021368"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submandibular gland neoplasm","secondary_identifiers":["SCTID:254464000","EFO:1001853","MEDGEN:20986","NCIT:C3393","MESH:D013365","UMLS:C0038558"],"synonyms":[{"name":"neoplasm of submandibular gland","type":"exact"},{"name":"neoplasm of the submandibular gland","type":"exact"},{"name":"submandibular gland neoplasm (disease)","type":"exact"},{"name":"submandibular gland tumor","type":"exact"},{"name":"submandibular gland tumour","type":"exact"},{"name":"tumor of submandibular gland","type":"exact"},{"name":"tumor of the submandibular gland","type":"exact"},{"name":"tumour of submandibular gland","type":"exact"},{"name":"tumour of the submandibular gland","type":"exact"}],"termid":"MONDO:0021244","xrefs":{"Monarch":{"xref_id":"0021244"}}}


id: PBO:0013758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase Erg8 (predicted)","termid":"PBO:0013758"}


id: PBO:0075444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPART antisense RNA 1","termid":"PBO:0075444"}


id: PBO:0117397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCC complex scaffolding subunit CCDC22","termid":"PBO:0117397"}


id: MONDO:0002476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Absence of urine output.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"anuria","secondary_identifiers":["MEDGEN:358","DOID:2983","MESH:D001002","UMLS:C0003460","EFO:0009530","icd11.foundation:248693056"],"synonyms":[{"name":"suppression of urinary secretion","type":"exact"}],"termid":"MONDO:0002476","xrefs":{"Monarch":{"xref_id":"0002476"}}}


id: PBO:0078771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-3","termid":"PBO:0078771"}


id: PBO:0048092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 13","termid":"PBO:0048092"}


id: PR:O59855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssa2 gene.","definition_xrefs":["UniProtKB:O59855","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.13","synonyms":[{"name":"Spom972h-ssa2","type":"exact"}],"termid":"PR:O59855"}


id: MONDO:0006936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The pathologic narrowing of the orifice of the pulmonary valve. This lesion restricts blood outflow from the right ventricle to the pulmonary artery. When the trileaflet valve is fused into an imperforate membrane, the blockage is complete.","definition_xrefs":["MESH:D011666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary valve disorder","termid":"MONDO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pulmonary valve stenosis","secondary_identifiers":["UMLS:C0034089","icd11.foundation:611886666","EFO:1001138","DOID:6420","MedDRA:10037450","MEDGEN:18768","NANDO:2200304"],"termid":"MONDO:0006936","xrefs":{"Monarch":{"xref_id":"0006936"}}}


id: PBO:0079739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 6","termid":"PBO:0079739"}


id: PBO:0045589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4","termid":"PBO:0045589"}


id: GO:1900369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of post-transcriptional gene silencing by RNA.","definition_xrefs":["GOC:TermGenie","PMID:22412382","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-transcriptional gene silencing","termid":"GO:0060149"},{"relation_name":"is_a","term_name":"negative regulation of gene silencing by regulatory ncRNA","termid":"GO:0060967"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900368"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-transcriptional gene silencing by regulatory ncRNA","synonyms":[{"name":"down regulation of RNA interference","type":"exact"},{"name":"down regulation of RNAi","type":"exact"},{"name":"down-regulation of RNA interference","type":"exact"},{"name":"down-regulation of RNAi","type":"exact"},{"name":"downregulation of RNA interference","type":"exact"},{"name":"downregulation of RNAi","type":"exact"},{"name":"inhibition of RNA interference","type":"narrow"},{"name":"inhibition of RNAi","type":"exact"},{"name":"negative regulation of PTGS","type":"exact"},{"name":"negative regulation of RNA interference","type":"exact"},{"name":"negative regulation of RNAi","type":"exact"},{"name":"negative regulation of post-transcriptional gene silencing by RNA","type":"related"},{"name":"negative regulation of post-transcriptional gene silencing by ncRNA","type":"related"},{"name":"negative regulation of posttranscriptional gene silencing by siRNA","type":"narrow"}],"termid":"GO:1900369"}


id: PBO:0120073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRN2 antisense RNA 2","termid":"PBO:0120073"}


id: GO:0006305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of alkyl groups to many positions on all four bases of DNA. Alkylating agents can also modify the bases of incoming nucleotides in the course of DNA synthesis.","definition_xrefs":["ISBN:0716735970"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA alkylation (obsolete GO:0006305)","termid":"GO:0006305"}


id: PBO:0075293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 32","termid":"PBO:0075293"}


id: PBO:0059577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 4","termid":"PBO:0059577"}


id: PBO:0058578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6515","termid":"PBO:0058578"}


id: PBO:0067071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 100, pseudogene","termid":"PBO:0067071"}


id: GO:1900018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex.","definition_xrefs":["GOC:TermGenie","GOC:rb","PMID:10594013","PMID:19666497"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex (obsolete GO:1900018)","termid":"GO:1900018"}


id: GO:0050896
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id: PBO:0059256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L22","termid":"PBO:0059256"}


id: SO:0001939
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 12th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K12_acetylation_site","synonyms":[{"name":"H4K12 acetylation site","type":"exact"},{"name":"H4K12ac","type":"exact"}],"termid":"SO:0001939"}


id: PR:P87294
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sub1 gene.","definition_xrefs":["UniProtKB:P87294","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcriptional coactivator (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.02","synonyms":[{"name":"Spom972h-sub1","type":"exact"}],"termid":"PR:P87294"}


id: GO:0031319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus is received by a cell and converted into a molecular signal; cAMP is the nucleotide cyclic AMP.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to cAMP","termid":"GO:0051591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cAMP","synonyms":[{"name":"3',5'-cAMP detection","type":"exact"},{"name":"3',5'-cAMP sensing","type":"exact"},{"name":"cAMP detection","type":"exact"},{"name":"cAMP sensing","type":"exact"},{"name":"cyclic AMP detection","type":"exact"},{"name":"detection of 3',5' cAMP","type":"exact"},{"name":"detection of 3',5'-cAMP","type":"exact"},{"name":"detection of adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"detection of cyclic AMP","type":"exact"}],"termid":"GO:0031319"}


id: MONDO:0017479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelia of upper limb","termid":"MONDO:0017437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"amelia of upper limb, bilateral","secondary_identifiers":["icd11.foundation:587439983","Orphanet:295055"],"termid":"MONDO:0017479","xrefs":{"Monarch":{"xref_id":"0017479"}}}


id: FYPO:0002801
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein degradation is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein degradation during nitrogen starvation","synonyms":[{"name":"normal protein breakdown during nitrogen starvation","type":"exact"},{"name":"normal protein catabolic process during nitrogen starvation","type":"exact"},{"name":"normal protein catabolism during nitrogen starvation","type":"exact"},{"name":"normal protein degradation during nitrogen depletion","type":"exact"},{"name":"normal protein degradation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002801"}


id: PR:O13310
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- orb6 gene.","definition_xrefs":["UniProtKB:O13310","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase orb6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.12","synonyms":[{"name":"Spom972h-orb6","type":"exact"}],"termid":"PR:O13310"}


id: PBO:0065229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 11","termid":"PBO:0065229"}


id: MONDO:0006922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family anaplasmataceae.","definition_xrefs":["MESH:D000711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsiosis","termid":"MONDO:0006956"},{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anaplasmataceae infectious disease","secondary_identifiers":["SCTID:422167001"],"synonyms":[{"name":"Anaplasmataceae caused disease or disorder","type":"exact"},{"name":"Anaplasmataceae disease or disorder","type":"exact"},{"name":"Anaplasmataceae infection","type":"related"},{"name":"Haemobartonelloses","type":"related"},{"name":"Haemobartonellosis","type":"related"},{"name":"infection, Anaplasmataceae","type":"related"},{"name":"infections, Anaplasmataceae","type":"related"}],"termid":"MONDO:0006922","xrefs":{"Monarch":{"xref_id":"0006922"}}}


id: PBO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by ammonia","termid":"PBO:0001104"}


id: RO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between protein a (a transcription factor) and DNA element b if and only if a activates the process of transcription of b.","direct_ancestors":[{"relation_name":"is_a","term_name":"activity_directly_positively_regulates_activity_of","termid":"RO:0002450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increases_expression_of","termid":"RO:0003003"}


id: GO:1905915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:BHF_miRNA","PMID:25089138","GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"}


id: PBO:0056984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30c-2","termid":"PBO:0056984"}


id: PBO:0113406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; important regulator of substrate invagination from the vacuolar membrane; targeted to vacuole via AP-3 pathway; VTC2 has a paralog, VTC3, that arose from the whole genome duplication","termid":"PBO:0113406"}


id: FYPO:0001233
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[121584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount, distribution, composition or morphology of a cell part is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal subcellular component","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_03250"],"single_locus_genotype_uniquenames":["ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta"],"synonyms":[{"name":"normal subcellular structure","type":"related"}],"termid":"FYPO:0001233","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: GO:0033741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + glutathione disulfide + H+ + sulfite = 5'-adenylyl sulfate + 2 glutathione.","definition_xrefs":["RHEA:14141","EC:1.8.4.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"adenylyl-sulfate reductase (glutathione) activity","secondary_identifiers":["KEGG_REACTION:R05717","MetaCyc:1.8.4.9-RXN"],"synonyms":[{"name":"5'-adenylylsulfate reductase activity","type":"related"},{"name":"AMP,sulfite:glutathione-disulfide oxidoreductase (adenosine-5'-phosphosulfate-forming) activity","type":"related"},{"name":"AMP,sulfite:oxidized-glutathione oxidoreductase (adenosine-5'-phosphosulfate-forming) activity","type":"related"},{"name":"plant-type 5'-adenylylsulfate reductase activity","type":"narrow"}],"termid":"GO:0033741"}


id: PBO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0000933"}


id: PBO:0081057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 14","termid":"PBO:0081057"}


id: GO:0002600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002594"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0002598"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"positive regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"stimulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"}],"termid":"GO:0002600"}


id: GO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the anther wall tapetum. This process pertains to the initial formation of a structure from unspecified parts. The anther wall tapetum is a layer of cells that provides a source of nutrition for the pollen grains as they mature.","definition_xrefs":["GOC:sm","GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"stamen formation","termid":"GO:0048455"},{"relation_name":"part_of","term_name":"anther wall tapetum morphogenesis","termid":"GO:0048655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum formation","synonyms":[{"name":"tapetal layer formation","type":"broad"},{"name":"tapetum formation","type":"broad"}],"termid":"GO:0048656"}


id: FYPO:0003338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actomyosin contractile ring is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actomyosin contractile ring morphology","synonyms":[{"name":"abnormal actomyosin contractile ring morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring morphology during vegetative growth","type":"exact"},{"name":"abnormal contractile ring morphology","type":"exact"},{"name":"abnormal cytokinetic contractile ring morphology","type":"exact"},{"name":"abnormal mitotic contractile ring morphology","type":"exact"}],"termid":"FYPO:0003338"}


id: PBO:0058066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4285","termid":"PBO:0058066"}


id: FYPO:0007191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Rad52 accumulates remain present for longer than normal.","definition_xrefs":["PMID:31483748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during vegetative growth","synonyms":[{"name":"delayed peak level of Rad52 foci during vegetative growth","type":"related"},{"name":"increased duration of Rad22 focus presence during vegetative growth","type":"exact"},{"name":"increased duration of Rad52 focus presence during mitotic cell cycle","type":"related"},{"name":"increased persistence of Rad52 foci during vegetative growth","type":"exact"},{"name":"prolonged Rad52 focus presence during vegetative growth","type":"exact"}],"termid":"FYPO:0007191"}


id: GO:1902686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of a programmed cell death process.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","GOC:pg","PMID:20151314","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability","termid":"GO:0035794"},{"relation_name":"part_of","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization involved in programmed cell death","synonyms":[{"name":"MPT involved in PCD","type":"narrow"},{"name":"MPT involved in caspase-independent apoptosis","type":"related"},{"name":"MPT involved in caspase-independent cell death","type":"narrow"},{"name":"MPT involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in programmed cell death","type":"narrow"},{"name":"MPT involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeabilization involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in regulated cell death","type":"related"},{"name":"mitochondrial outer membrane permeabilization during programmed cell death","type":"exact"},{"name":"mitochondrial permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrion outer membrane permeabilization involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in PCD","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in regulated cell death","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in PCD","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in programmed cell death","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in regulated cell death","type":"related"}],"termid":"GO:1902686"}


id: GO:0042215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the absence of oxygen.","definition_xrefs":["PMID:12697029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic phenol-containing compound metabolic process","secondary_identifiers":["UM-BBD_pathwayID:phe"],"synonyms":[{"name":"anaerobic phenol-containing compound metabolism","type":"exact"}],"termid":"GO:0042215"}


id: GO:0060022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the hard palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The hard palate is the anterior portion of the palate consisting of bone and mucous membranes.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"secondary palate development","termid":"GO:0062009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hard palate development","synonyms":[{"name":"palatum durum development","type":"exact"}],"termid":"GO:0060022"}


id: PR:G2TRL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.04c gene.","definition_xrefs":["UniProtKB:G2TRL1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C186.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.04c","synonyms":[{"name":"Spom972h-SPAC186.04c","type":"exact"}],"termid":"PR:G2TRL1"}


id: GO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIIF class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIIF-class transcription factor binding (obsolete GO:0001089)","synonyms":[{"name":"TFIIF-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001089"}


id: GO:0098756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-21 stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-21","synonyms":[{"name":"response to IL-21","type":"exact"}],"termid":"GO:0098756"}


id: FYPO:0001329
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[121166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is lower than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03689":null,"SJAG_04697":null},"genotype_count":2,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of substance in cell during vegetative growth","references_by_uniquename":{"PMID:35226668":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697","SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta","gms1delta"],"synonyms":[{"name":"decreased level of substance in cell during mitotic cell cycle","type":"related"},{"name":"reduced level of substance in cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001329","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: MONDO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart defects and ectodermal dysplasia","secondary_identifiers":["OMIM:617364","UMLS:C4479250","MEDGEN:1387409"],"synonyms":[{"name":"CHDED","type":"related"},{"name":"congenital heart defects and ectodermal dysplasia","type":"exact"}],"termid":"MONDO:0044303","xrefs":{"Monarch":{"xref_id":"0044303"}}}


id: MONDO:0007744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"},{"relation_name":"is_a","term_name":"hyperalphalipoproteinemia","termid":"MONDO:0015903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"cholesterol-ester transfer protein deficiency","secondary_identifiers":["UMLS:C3875011","SCTID:15771000119109","MEDGEN:840020","GARD:16724","DOID:0111369","OMIM:143470","Orphanet:79506"],"synonyms":[{"name":"CEPT deficiency","type":"exact"},{"name":"CETP deficiency","type":"related"},{"name":"HALP1","type":"related"},{"name":"Hdlcq10","type":"related"},{"name":"cholesterol ester transfer Protein deficiency","type":"related"},{"name":"familial hyperalphalipoproteinemia","type":"exact"},{"name":"high density lipoprotein cholesterol level QTL 10","type":"exact"},{"name":"high density lipoprotein cholesterol level quantitative trait locus 10","type":"related"},{"name":"hyperalphalipoproteinemia","type":"broad"},{"name":"hyperalphalipoproteinemia 1","type":"exact"},{"name":"hyperalphalipoproteinemia type 1","type":"exact"}],"termid":"MONDO:0007744","xrefs":{"Monarch":{"xref_id":"0007744"}}}


id: PBO:0041437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 43","termid":"PBO:0041437"}


id: MONDO:0003057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pediatric meningioma","secondary_identifiers":["MEDGEN:79156","DOID:4593","NCIT:C8264","NANDO:2200094","UMLS:C0280656"],"synonyms":[{"name":"childhood meningioma","type":"exact"},{"name":"childhood meningioma (disease)","type":"exact"},{"name":"meningioma","type":"broad"},{"name":"meningioma (disease) of childhood","type":"exact"},{"name":"paediatric meningioma (disease)","type":"exact"},{"name":"pediatric meningioma","type":"exact"},{"name":"pediatric meningioma (disease)","type":"exact"}],"termid":"MONDO:0003057","xrefs":{"Monarch":{"xref_id":"0003057"}}}


id: SO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of discontinuous sequences.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_collection","synonyms":[{"name":"sequence collection","type":"exact"}],"termid":"SO:0001260"}


id: FYPO:0007984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) disassembly does not take place after cell division.","definition_xrefs":["PMID:15068790","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished eMTOC disassembly","termid":"FYPO:0007984"}


id: GO:0062194
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99214],"is_not":false,"summary":null,"term":"GO:0062194"}]},"cv_name":"cellular_component","definition":"A microtubule minus end that is part of a cytoplasmic microtubule.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule minus-end","termid":"GO:0036449"},{"relation_name":"part_of","term_name":"cytoplasmic microtubule","termid":"GO:0005881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"cytoplasmic microtubule minus-end","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062194","terms_by_termid":{"GO:0062194":null}}


id: PBO:0038724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 19","termid":"PBO:0038724"}


id: PBO:0074333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1","termid":"PBO:0074333"}


id: PBO:0044079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 1","termid":"PBO:0044079"}


id: PBO:0043343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clock circadian regulator","termid":"PBO:0043343"}


id: GO:0001553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation.","direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"luteinization","secondary_identifiers":["Wikipedia:Luteal_phase","Wikipedia:Luteinization"],"synonyms":[{"name":"luteal phase","type":"related"}],"termid":"GO:0001553"}


id: GO:0051069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactomannan, a polysaccharide composed of D-galactose and D-mannose. The mannose units form the backbone structure (a linear main chain) with the D-galactose as single side units.","definition_xrefs":["PMID:33012173","PMID:30701316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substituted mannan metabolic process","termid":"GO:0006080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactomannan metabolic process","synonyms":[{"name":"galactomannan metabolism","type":"exact"}],"termid":"GO:0051069"}


id: PBO:0063228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 11 Y-linked","termid":"PBO:0063228"}


id: PBO:0063361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 1","termid":"PBO:0063361"}


id: MONDO:0021633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma that arises from the cerebral hemispheres.","definition_xrefs":["NCIT:C4951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"},{"relation_name":"is_a","term_name":"brain astrocytoma","termid":"MONDO:0021631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral astrocytoma","secondary_identifiers":["MEDGEN:196691","UMLS:C0750935","SCTID:99131000119108"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of cerebral hemisphere","type":"exact"},{"name":"astrocytoma of cerebral hemispheres","type":"exact"},{"name":"astrocytoma of cerebrum","type":"exact"},{"name":"astrocytoma of the cerebral hemispheres","type":"exact"},{"name":"astrocytoma of the cerebrum","type":"exact"},{"name":"cerebral astrocytoma","type":"exact"},{"name":"cerebral hemisphere astrocytoma (excluding glioblastoma)","type":"exact"},{"name":"cerebral hemispheric astrocytoma","type":"exact"}],"termid":"MONDO:0021633","xrefs":{"Monarch":{"xref_id":"0021633"}}}


id: FYPO:0006698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-phosphoribosyl diphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular 5-phosphoribosyl diphosphate level","synonyms":[{"name":"decreased 5-phosphoribosyl diphosphate accumulation","type":"related"},{"name":"decreased cellular 5-phosphoribosyl diphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular 5-phosphoribosyl diphosphate level during vegetative growth","type":"exact"},{"name":"decreased cellular PRPP level","type":"exact"},{"name":"reduced cellular 5-phosphoribosyl diphosphate level","type":"exact"}],"termid":"FYPO:0006698"}


id: GO:0051588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"neurotransmitter transport","termid":"GO:0006836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of neurotransmitter transport","termid":"GO:0051588"}


id: GO:1903264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any nitrate reductase activity that is involved in anaerobic electron transport chain.","definition_xrefs":["GOC:TermGenie","PMID:12910261","GO_REF:0000061","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrate reductase activity involved in anaerobic electron transport chain (obsolete GO:1903264)","synonyms":[{"name":"nitrate reductase (acceptor) involved in anaerobic electron transport chain","type":"exact"},{"name":"nitrite:(acceptor) oxidoreductase involved in anaerobic electron transport chain","type":"exact"},{"name":"nitrite:acceptor oxidoreductase involved in anaerobic electron transport chain","type":"exact"},{"name":"respiratory nitrate reductase activity involved in anaerobic electron transport chain","type":"narrow"}],"termid":"GO:1903264"}


id: MONDO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000915 (obsolete MONDO:0000915)","termid":"MONDO:0000915","xrefs":{"Monarch":{"xref_id":"0000915"}}}


id: GO:0007578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A haploid's inability to mate due to the loss of silencing at the mating-type loci, resulting in expression of both of the normally silent mating-type cassettes.","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging dependent sterility (sensu Saccharomyces) (obsolete GO:0007578)","synonyms":[{"name":"aging dependent sterility (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007578"}


id: SO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon that encodes function required for conjugation.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugative_transposon","synonyms":[{"name":"conjugative transposon","type":"exact"}],"termid":"SO:0000371"}


id: PBO:0062536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 1","termid":"PBO:0062536"}


id: MONDO:0005380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A none disease characterized by death of bone tissue due to a lack of blood supply.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare rheumatologic disease (obsolete MONDO:0015940)","termid":"MONDO:0015940"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteonecrosis","secondary_identifiers":["ICD10CM:M87","UMLS:C0029445","ICD9:733.43","ICD9:733.44","MEDGEN:45249","ICD10WHO:M87","icd11.foundation:536467755","DOID:0080008","NCIT:C35476","EFO:0004259","ICD9:733.41","Orphanet:399158","SCTID:240196003","GARD:21657","ICD9:732.3","ICD9:733.4","ICD9:733.49","DOID:10159","ICD9:733.42","NCIT:C34880","NORD:1537","MESH:D010020"],"synonyms":[{"name":"aseptic necrosis","type":"exact"},{"name":"bone necrosis","type":"exact"},{"name":"ischaemic bone disease","type":"exact"},{"name":"ischemic bone disease","type":"exact"},{"name":"osteonecrosis","type":"exact"}],"termid":"MONDO:0005380","xrefs":{"Monarch":{"xref_id":"0005380"}}}


id: GO:0042249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an embryonic epithelium, such that they all orient to similar coordinates.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:jl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity of embryonic epithelium","termid":"GO:0042249"}


id: PBO:0060392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 1 pseudogene 2","termid":"PBO:0060392"}


id: PBO:0073407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 10","termid":"PBO:0073407"}


id: GO:2000156
data:
  {"annotated_genes":["SJAG_02419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115619],"is_not":false,"summary":null,"term":"GO:2000156"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde vesicle-mediated transport, Golgi to ER.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of retrograde vesicle-mediated transport, Golgi to ER","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cis-Golgi to rough ER transport","type":"exact"},{"name":"regulation of cis-Golgi to rough ER vesicle-mediated transport","type":"exact"},{"name":"regulation of cis-Golgi to rough endoplasmic reticulum transport","type":"exact"},{"name":"regulation of cis-Golgi to rough endoplasmic reticulum vesicle-mediated transport","type":"exact"},{"name":"regulation of retrograde (Golgi to ER) transport","type":"exact"},{"name":"regulation of retrograde transport, Golgi to ER","type":"exact"},{"name":"regulation of retrograde transport, Golgi to endoplasmic reticulum","type":"exact"},{"name":"regulation of retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","type":"related"}],"termid":"GO:2000156","terms_by_termid":{"GO:2000156":null}}


id: GO:0072314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular epithelial cell. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"}


id: GO:0140455
data:
  {"annotated_genes":["SJAG_01556","SJAG_02341","SJAG_02419","SJAG_00173","SJAG_00436","SJAG_00552","SJAG_03794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106963,120600],"is_not":false,"summary":null,"term":"GO:0140455"},{"annotations":[115618,111620,109982,111729,112320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are either targeted to cytoplasmic proteasomes for degradation or protected by chaperones to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00436":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"cytoplasm protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140455","terms_by_termid":{"GO:0071629":null,"GO:0140455":null}}


id: PBO:0017872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester transmembrane transporter (predicted)","termid":"PBO:0017872"}


id: GO:0035404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a serine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-serine phosphorylation (obsolete GO:0035404)","synonyms":[{"name":"histone serine phosphorylation","type":"exact"}],"termid":"GO:0035404"}


id: MONDO:0016667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sickle cell disease associated with an other hemoglobin anomaly (obsolete MONDO:0016667)","secondary_identifiers":["Orphanet:251355"],"synonyms":[{"name":"Double heterozygotes sickling disorder","type":"exact"}],"termid":"MONDO:0016667","xrefs":{"Monarch":{"xref_id":"0016667"}}}


id: PBO:0047511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 3","termid":"PBO:0047511"}


id: GO:0033453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"GCU codon-amino acid adaptor activity","synonyms":[{"name":"GCT codon-amino acid adaptor activity","type":"exact"},{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033453"}


id: PBO:0026640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_during_cellular_response_to_UV","termid":"PBO:0026640"}


id: PBO:0056553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 3","termid":"PBO:0056553"}


id: GO:2000465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycogen (starch) synthase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glycogen (starch) synthase activity","synonyms":[{"name":"regulation of UDP-glucose-glycogen glucosyltransferase activity","type":"exact"},{"name":"regulation of UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"regulation of UDP-glycogen synthase activity","type":"exact"},{"name":"regulation of UDPG-glycogen synthetase activity","type":"exact"},{"name":"regulation of UDPG-glycogen transglucosylase activity","type":"exact"},{"name":"regulation of UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"regulation of glycogen (starch) synthetase activity","type":"exact"},{"name":"regulation of uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"exact"}],"termid":"GO:2000465"}


id: PBO:0039498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A21, pseudogene","termid":"PBO:0039498"}


id: PBO:0079238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 12","termid":"PBO:0079238"}


id: GO:0033503
data:
  {"annotated_genes":["SJAG_00320","SJAG_00293","SJAG_03006","SJAG_02319"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73121,73204,76553,95333],"is_not":false,"summary":null,"term":"GO:0033503"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex that contains two RING finger proteins, which have ubiquitin ligase activity, in addition to a protein with ubiquitin-conjugating enzyme activity; catalyzes the ubiquitination of histone H2B at lysine 119 (or the equivalent residue). In Schizosaccharomyces the subunits are Rhp6, Shf1, Brl2/Rfp1 and Brl1/Rfp2.","definition_xrefs":["GOC:mah","PMID:17363370","PMID:17374714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"HULC complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033503","terms_by_termid":{"GO:0033503":null}}


id: PBO:0110494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 10","termid":"PBO:0110494"}


id: GO:0007240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of Hog1 (obsolete GO:0007240)","synonyms":[{"name":"nuclear translocation of Hog1","type":"exact"}],"termid":"GO:0007240"}


id: MONDO:0100518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of attention deficit-hyperactivity disorder that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary attention deficit-hyperactivity disorder","secondary_identifiers":["OMIM:143465"],"termid":"MONDO:0100518","xrefs":{"Monarch":{"xref_id":"0100518"}}}


id: MONDO:0013143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"},{"relation_name":"is_a","term_name":"inherited thrombophilia","termid":"MONDO:0100240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary thrombophilia due to congenital histidine-rich (poly-L) glycoprotein deficiency","secondary_identifiers":["icd11.foundation:1764310021","UMLS:C2751090","DOID:0111903","GARD:17125","Orphanet:217467","MEDGEN:416465","MESH:C567737","OMIM:613116"],"synonyms":[{"name":"THPH11","type":"related"},{"name":"hereditary thrombophilia due to congenital HRG deficiency","type":"exact"},{"name":"thrombophilia 11 due to HRG deficiency","type":"exact"},{"name":"thrombophilia due to elevated histidine-rich glycoprotein","type":"related"},{"name":"thrombophilia due to histidine-rich glycoprotein deficiency","type":"related"}],"termid":"MONDO:0013143","xrefs":{"Monarch":{"xref_id":"0013143"}}}


id: GO:0099025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic membrane (obsolete GO:0099025)","termid":"GO:0099025"}


id: FYPO:0005908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell is lower than normal (i.e. lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of cellular response to stress gene mRNA during vegetative growth","type":"exact"},{"name":"decreased level of stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"decreased mRNA level of stress responsive genes during vegetative growth","type":"exact"},{"name":"decreased stress responsive gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of stress responsive gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005908"}


id: PBO:0005519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Spc25","termid":"PBO:0005519"}


id: GO:0010508
data:
  {"annotated_genes":["SJAG_02433","SJAG_00704","SJAG_02765","SJAG_05346","SJAG_04249","SJAG_04502","SJAG_00169","SJAG_01184","SJAG_01716","SJAG_04496","SJAG_04435","SJAG_05000","SJAG_00824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75436,75543,81800,100829,101393,111657,113832,116574],"is_not":false,"summary":null,"term":"GO:0010508"},{"annotations":[99572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[70719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[108227,77283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[91470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"positively_regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00704":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_01716":null,"SJAG_02433":null,"SJAG_02765":null,"SJAG_04249":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_05000":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0010508","terms_by_termid":{"GO:0010508":null,"GO:0016239":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null}}


id: PBO:0070036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1333, pseudogene","termid":"PBO:0070036"}


id: PBO:0087232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sensor of mitochondrial dysfunction; regulates the subcellular location of Rtg1p and Rtg3p, transcriptional activators of the retrograde (RTG) and TOR pathways; Rtg2p is inhibited by the phosphorylated form of Mks1p","termid":"PBO:0087232"}


id: GO:0047965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + mucus glycoprotein = CoA + O-palmitoylglycoprotein.","definition_xrefs":["MetaCyc:GLYCOPROTEIN-O-FATTY-ACYLTRANSFERASE-RXN","EC:2.3.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"glycoprotein O-fatty-acyltransferase activity","synonyms":[{"name":"fatty-acyl-CoA:mucus-glycoprotein fatty-acyltransferase activity","type":"related"},{"name":"protein acyltransferase activity","type":"related"}],"termid":"GO:0047965"}


id: MONDO:0006565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatitis herpetiformis in children","definition_xrefs":["EFO:1000719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis herpetiformis","termid":"MONDO:0015614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"juvenile dermatitis herpetiformis","secondary_identifiers":["MEDGEN:508884","SCTID:5906000","UMLS:C0152092","ICD9:694.2","DOID:8507"],"termid":"MONDO:0006565","xrefs":{"Monarch":{"xref_id":"0006565"}}}


id: FYPO:0001418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology during vegetative growth","termid":"FYPO:0000352"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology","termid":"FYPO:0003064"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001418"}


id: PBO:0071118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 120","termid":"PBO:0071118"}


id: SO:1000121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000121 sequence_variant_causing_polypeptide_localization_change (obsolete SO:1000121)","synonyms":[{"name":"mutation causing polypeptide localization change","type":"related"},{"name":"sequence variant causing polypeptide localization change","type":"exact"}],"termid":"SO:1000121"}


id: MOD:01912
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one bromine atom.","definition_xrefs":["Unimod:340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated residue","termid":"MOD:00754"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated residue","synonyms":[{"name":"Br1Res","type":"exact"}],"termid":"MOD:01912"}


id: GO:0008549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. An enzyme that is involved in endocytosis and is instrumental in pinching off membrane vesicles.","definition_xrefs":["MetaCyc:3.6.1.50-RXN","EC:3.6.5.5"],"gene_count":0,"genotype_count":0,"name":"obsolete dynamin GTPase activity (obsolete GO:0008549)","synonyms":[{"name":"dynamin GTPase activity","type":"exact"},{"name":"dynamine GTPase activity","type":"exact"}],"termid":"GO:0008549"}


id: PBO:0090305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh6","termid":"PBO:0090305"}


id: PBO:0029482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell_population_(obsolete_FYPO:0002233)","termid":"PBO:0029482"}


id: PBO:0055329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2757","termid":"PBO:0055329"}


id: MONDO:0024527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fibronectin glomerulopathy","termid":"MONDO:0007671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"glomerulopathy with fibronectin deposits 1","secondary_identifiers":["OMIM:137950","UMLS:C0403557","MEDGEN:98017","GARD:9268"],"synonyms":[{"name":"GFND1","type":"exact"},{"name":"glomerulopathy with fibronectin deposits 1","type":"exact"},{"name":"glomerulopathy with giant fibrillar deposits","type":"related"},{"name":"lobular glomerulopathy, familial","type":"related"}],"termid":"MONDO:0024527","xrefs":{"Monarch":{"xref_id":"0024527"}}}


id: GO:0031892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoactive intestinal polypeptide receptor binding","termid":"GO:0031890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 2 vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"type 2 vasoactive intestinal polypeptide receptor ligand","type":"narrow"},{"name":"type 3 PACAP receptor binding","type":"exact"}],"termid":"GO:0031892"}


id: GO:0008484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of a sulfuric ester bond, an ester formed from sulfuric acid, O=SO(OH)2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"sulfuric ester hydrolase activity","secondary_identifiers":["EC:3.1.6.-"],"synonyms":[{"name":"sulfatase activity","type":"exact"},{"name":"sulphuric ester hydrolase activity","type":"exact"}],"termid":"GO:0008484"}


id: PBO:0081443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 300","termid":"PBO:0081443"}


id: GO:0003925
data:
  {"annotated_genes":["SJAG_03453","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71287,92800],"is_not":false,"summary":null,"term":"GO:0003925"}]},"cv_name":"molecular_function","definition":"A molecular function regulator that cycles between active GTP-bound and inactive GDP-bound states. In its active state, binds to a variety of effector proteins to regulate cellular processes. Intrinsic GTPase activity returns the G protein to its GDP-bound state. The return to the GDP-bound state can be accelerated by the action of a GTPase-activating protein (GAP).","definition_xrefs":["PMID:24470015","PMID:16923326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase activity","termid":"GO:0003924"},{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003924"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0098772","GO:0003674","GO:0016787","GO:0003924"],"is_obsolete":false,"name":"G protein activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-400027","GO:0003927","Reactome:R-HSA-422320"],"synonyms":[{"name":"Ras superfamily protein","type":"narrow"},{"name":"heterotrimeric G-protein GTPase activity","type":"narrow"},{"name":"large G-protein GTPase activity","type":"narrow"},{"name":"large G-protein activity","type":"narrow"},{"name":"signaling G protein activity","type":"exact"},{"name":"small G-protein","type":"narrow"},{"name":"small GTPase","type":"narrow"},{"name":"small GTPase activity","type":"narrow"},{"name":"small monomeric G protein activity","type":"narrow"},{"name":"small monomeric GTPase activity","type":"narrow"}],"termid":"GO:0003925","terms_by_termid":{"GO:0003925":null}}


id: MONDO:0700136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital metabolic disorder characterized by a deficiency in the enzyme ferrochelatase, which occurs in cattle.","definition_xrefs":["NCIT:C131472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine protoporphyria","termid":"MONDO:0700136","xrefs":{"Monarch":{"xref_id":"0700136"}}}


id: GO:0035593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the Wnt signaling pathway by the directed movement of a Wnt protein within the extracellular region.","definition_xrefs":["GOC:BHF","PMID:19906850"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway by establishment of Wnt protein localization to extracellular region (obsolete GO:0035593)","synonyms":[{"name":"positive regulation of Wnt diffusion","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway by establishment of Wnt protein localisation in extracellular region","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway by establishment of Wnt protein localization in extracellular region","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway by establishment of Wnt protein localization to extracellular region","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway by establishment of Wnt protein localization in extracellular region","type":"exact"},{"name":"positive regulation of Wnt signaling range","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway by establishment of Wnt protein localization to extracellular region","type":"exact"}],"termid":"GO:0035593"}


id: MONDO:0013076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 7","secondary_identifiers":["UMLS:C2751802","MEDGEN:416637","OMIM:613003"],"synonyms":[{"name":"ADHD7","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 7","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 7","type":"exact"},{"name":"susceptibility to attention deficit-hyperactivity disorder 7","type":"related"}],"termid":"MONDO:0013076","xrefs":{"Monarch":{"xref_id":"0013076"}}}


id: PBO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleotide-excision_repair_during_cellular_response_to_UV","termid":"PBO:0028569"}


id: GO:0061665
data:
  {"annotated_genes":["SJAG_03175","SJAG_00727","SJAG_01776"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74388,74407,106315],"is_not":false,"summary":null,"term":"GO:0061665"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of SUMO to a substrate protein via the reaction X-SUMO + S = X + S-SUMO, where X is either an E2 or E3 enzyme, the X-SUMO linkage is a thioester bond, and the S-SUMO linkage is an isopeptide bond between the C-terminal amino acid of SUMO and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO transferase activity","termid":"GO:0019789"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_01776":null,"SJAG_03175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0019787","GO:0016746","GO:0003674","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"SUMO ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9834809","Reactome:R-HSA-9842868"],"synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061665","terms_by_termid":{"GO:0061665":null}}


id: PBO:0080543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 2","termid":"PBO:0080543"}


id: MONDO:0010204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal acid lipase deficiency (obsolete MONDO:0010204)","termid":"MONDO:0010204","xrefs":{"Monarch":{"xref_id":"0010204"}}}


id: MONDO:0019809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysfunction of the aortic valve characterized by incomplete valve closure that is present at birth.","definition_xrefs":["NCIT:C103936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve insufficiency","termid":"MONDO:0005648"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital aortic valve insufficiency","secondary_identifiers":["MedDRA:10010370","ICD10CM:Q23.1","Orphanet:95449","UMLS:C0158617","ICD9:746.4","MEDGEN:510599","SCTID:28656008"],"synonyms":[{"name":"Congential aortic valve insufficiency","type":"exact"},{"name":"congenital aortic insufficiency","type":"exact"},{"name":"congenital insufficiency of aortic valve","type":"exact"}],"termid":"MONDO:0019809","xrefs":{"Monarch":{"xref_id":"0019809"}}}


id: PBO:0027575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_endoplasmic_reticulum_tubular_network","termid":"PBO:0027575"}


id: PBO:0071272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 6","termid":"PBO:0071272"}


id: PBO:0040059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC4-TTLL3 readthrough","termid":"PBO:0040059"}


id: PBO:0060796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 2","termid":"PBO:0060796"}


id: PBO:0046572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 14","termid":"PBO:0046572"}


id: PBO:0071437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 43","termid":"PBO:0071437"}


id: MONDO:1010654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycythemia, non-human animal","termid":"MONDO:1010078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycythemia, domestic cat","secondary_identifiers":["OMIA:000809-9685"],"termid":"MONDO:1010654","xrefs":{"Monarch":{"xref_id":"1010654"}}}


id: GO:0034005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-(R)-germacrene A + diphosphate.","definition_xrefs":["RHEA:12516","EC:4.2.3.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"germacrene-A synthase activity","secondary_identifiers":["KEGG_REACTION:R07649","MetaCyc:RXN-11527"],"synonyms":[{"name":"(+)-(10R)-germacrene A synthase activity","type":"related"},{"name":"(+)-germacrene A synthase activity","type":"related"},{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (germacrene-A-forming) activity","type":"related"},{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase [(+)-germacrene-A-forming] activity","type":"related"},{"name":"GAS","type":"related"},{"name":"germacrene A synthase activity","type":"related"}],"termid":"GO:0034005"}


id: PBO:0027503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_oligomycin","termid":"PBO:0027503"}


id: PBO:0013782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase mvd1 (predicted)","termid":"PBO:0013782"}


id: PR:O43061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug136 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 136 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.08","synonyms":[{"name":"Spom972h-mug136","type":"exact"}],"termid":"PR:O43061"}


id: PBO:0053133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid droplet associated hydrolase","termid":"PBO:0053133"}


id: PR:Q9UT03
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sls1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT03"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sls1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.14c","synonyms":[{"name":"Spom972h-sls1","type":"exact"}],"termid":"PR:Q9UT03"}


id: PBO:0058163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4457","termid":"PBO:0058163"}


id: PBO:0074397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 7","termid":"PBO:0074397"}


id: MONDO:0019263
data:
  {"annotated_genes":["SJAG_01841"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"}]},"cv_name":"mondo","definition":"Erythropoietic protoporphyria (EPP) is an inherited disorder of the heme metabolic pathway characterized by accumulation of protoporphyrin in blood, erythrocytes and tissues, and cutaneous manifestations of photosensitivity.","definition_xrefs":["Orphanet:79278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythropoietic protoporphyria","termid":"MONDO:0001676"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0019142","MONDO:0005093","MONDO:0002515","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"autosomal erythropoietic protoporphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4527","MedDRA:10015289","NANDO:1200815"],"synonyms":[{"name":"EPP","type":"exact"}],"termid":"MONDO:0019263","terms_by_termid":{"MONDO:0008319":null},"xrefs":{"Monarch":{"xref_id":"0019263"}}}


id: PATO:0000792
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000792 repair function value (obsolete PATO:0000792)","termid":"PATO:0000792"}


id: PBO:0079323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 13","termid":"PBO:0079323"}


id: PBO:0051074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5/OR15-5B (non-functional)","termid":"PBO:0051074"}


id: MONDO:0013136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary hypotrichosis with recurrent skin vesicles is a very rare inherited hair loss disorder described in a family and characterized by sparse, fragile or absent hair on the scalp, eyebrows, eyelashes, axillae and rest of the body, associated with vesicle formation on various parts of the scalp and body which regularly burst and release watery fluid.","definition_xrefs":["Orphanet:217407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary hypotrichosis with recurrent skin vesicles","secondary_identifiers":["UMLS:C2751292","SCTID:724350009","GARD:17124","MEDGEN:442697","MESH:C567751","OMIM:613102"],"synonyms":[{"name":"hereditary hypotrichosis with recurrent skin vesicles","type":"exact"},{"name":"hypotrichosis and recurrent skin vesicles","type":"related"}],"termid":"MONDO:0013136","xrefs":{"Monarch":{"xref_id":"0013136"}}}


id: GO:0042380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the formation of both isopentenyl pyrophosphate and dimethylallyl pyrophosphate from (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate.","definition_xrefs":["GOC:js","PMID:11818558"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroxymethylbutenyl pyrophosphate reductase activity (obsolete GO:0042380)","synonyms":[{"name":"(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)","type":"exact"}],"termid":"GO:0042380"}


id: PBO:0079751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 2","termid":"PBO:0079751"}


id: FYPO:0007706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the removal of tubulin dimers from a microtubule occurs to a lower extent than normal in the lateral part of the cell.","definition_xrefs":["PomBase:mah","PMID:26443240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased microtubule depolymerization at cell side","synonyms":[{"name":"decreased microtubule catastrophe at cell side","type":"related"},{"name":"decreased microtubule depolymerisation at cell side","type":"exact"},{"name":"decreased microtubule depolymerization at cell side during mitotic cell cycle","type":"related"},{"name":"decreased microtubule depolymerization at cell side during vegetative growth","type":"exact"},{"name":"decreased microtubule depolymerization at lateral part of cell","type":"exact"},{"name":"reduced microtubule depolymerization at cell side","type":"exact"}],"termid":"FYPO:0007706"}


id: GO:0071550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a death domain (DD) interaction, as part of the extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:amm","InterPro:IPR000488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"death-inducing signaling complex assembly","secondary_identifiers":["Reactome:R-HSA-5357786"],"synonyms":[{"name":"DD-mediated complex assembly","type":"exact"},{"name":"DISC assembly","type":"exact"},{"name":"DISC formation","type":"exact"},{"name":"death domain-mediated complex assembly","type":"exact"},{"name":"death domain-mediated complex assembly involved in extrinsic apoptotic pathway","type":"exact"},{"name":"death-inducing signaling complex formation","type":"exact"},{"name":"death-inducing signalling complex assembly","type":"exact"}],"termid":"GO:0071550"}


id: FYPO:0005854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin cables is increased.","definition_xrefs":["PMID:12764130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0004803","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased actin cable assembly","synonyms":[{"name":"actin bundling increased","type":"related"},{"name":"increased actin bundling","type":"related"},{"name":"increased actin cable assembly during mitotic cell cycle","type":"related"},{"name":"increased actin cable assembly during vegetative growth","type":"exact"},{"name":"increased formin-nucleated actin cable assembly","type":"exact"}],"termid":"FYPO:0005854"}


id: MONDO:0013454
data:
  {"annotated_genes":["SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88841],"is_not":false,"summary":null,"term":"MONDO:0013454"}]},"cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the IMPDH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"IMPDH1-related retinopathy","termid":"MONDO:1040051"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110216","ICD10CM:H35.5","MESH:C564140","GARD:10488","HGNC:6052","MEDGEN:326698","OMIM:613837","UMLS:C1840284"],"synonyms":[{"name":"IMPDH1 Leber congenital amaurosis","type":"exact"},{"name":"LCA11","type":"exact"},{"name":"Leber congenital amaurosis 11","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in IMPDH1","type":"exact"},{"name":"Leber congenital amaurosis type 11","type":"exact"},{"name":"amaurosis congenita of Leber, type 11","type":"related"}],"termid":"MONDO:0013454","terms_by_termid":{"MONDO:0013454":null},"xrefs":{"Monarch":{"xref_id":"0013454"}}}


id: PBO:0116606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3130","termid":"PBO:0116606"}


id: MONDO:0018369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor arising from the ovary. It usually affects females in their first two decades of life. It contains variable amounts of immature embryonal tissues. Based on the amount of immature neuroepithelial component, immature teratomas are graded from 1 to 3. The stage and grade of the tumor and the grade of the metastatic tumor are the important factors that predict prognosis. The use of cisplatin-based combination chemotherapy has significantly improved the survival rates of the patients.","definition_xrefs":["NCIT:C8111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"},{"relation_name":"is_a","term_name":"ovarian biphasic or triphasic teratoma","termid":"MONDO:0003821"},{"relation_name":"is_a","term_name":"malignant non-dysgerminomatous germ cell tumor of ovary","termid":"MONDO:0016096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"immature ovarian teratoma","secondary_identifiers":["ONCOTREE:OIMT","UMLS:C0346182","icd11.foundation:551209361","MEDGEN:138044","NCIT:C39995","SCTID:254871000","Orphanet:398987","DOID:6331","GARD:21654"],"synonyms":[{"name":"immature germ cell teratoma of ovary","type":"exact"},{"name":"immature germ cell teratoma of the ovary","type":"exact"},{"name":"immature ovarian teratoma","type":"exact"},{"name":"immature teratoma","type":"related"},{"name":"immature teratoma of ovary","type":"exact"},{"name":"immature teratoma of the ovary","type":"exact"},{"name":"malignant germ cell teratoma of ovary","type":"exact"},{"name":"malignant germ cell teratoma of the ovary","type":"exact"},{"name":"malignant ovarian germ cell teratoma","type":"exact"},{"name":"malignant ovarian teratoma","type":"exact"},{"name":"malignant teratoma of ovary","type":"exact"},{"name":"malignant teratoma of the ovary","type":"exact"},{"name":"ovarian germ cell immature teratoma","type":"exact"},{"name":"ovarian immature germ cell teratoma","type":"exact"},{"name":"ovarian immature teratoma","type":"exact"},{"name":"ovarian malignant teratoma","type":"exact"},{"name":"ovary malignant teratoma","type":"exact"}],"termid":"MONDO:0018369","xrefs":{"Monarch":{"xref_id":"0018369"}}}


id: MONDO:0032830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snijders blok-fisher syndrome","secondary_identifiers":["MEDGEN:1684801","UMLS:C5231424","OMIM:618604","Orphanet:656135"],"synonyms":[{"name":"SNIBFIS","type":"related"},{"name":"SNIJDERS BLOK-FISHER SYNDROME","type":"related"}],"termid":"MONDO:0032830","xrefs":{"Monarch":{"xref_id":"0032830"}}}


id: MONDO:0009773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of ectodermal dysplasia characterized by hyperkeratosis and hyperhidrosis of the palms and soles, atrophic malar patches, hypodontia, conical teeth, onychodysplasia, and dry and sparse hair.","definition_xrefs":["Orphanet:2721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia WNT10A related","termid":"MONDO:0100358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"odonto-onycho-dermal dysplasia","secondary_identifiers":["GARD:4054","UMLS:C0796093","OMIM:257980","MEDGEN:208666","icd11.foundation:1256237872","MESH:C537742","SCTID:403762003"],"synonyms":[{"name":"OODD","type":"exact"},{"name":"ectodermal dysplasia","type":"broad"},{"name":"odontoonychodermal dysplasia","type":"related"}],"termid":"MONDO:0009773","xrefs":{"Monarch":{"xref_id":"0009773"}}}


id: PBO:0090935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase Prs5","termid":"PBO:0090935"}


id: GO:0019589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol into propane-1,3-diol and water.","definition_xrefs":["GOC:jl","MetaCyc:GOLPDLCAT-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glycerol catabolic process","termid":"GO:0019588"},{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"anaerobic glycerol catabolic process to propane-1,3-diol","synonyms":[{"name":"glycerol fermentation to 1,3-propanediol","type":"exact"},{"name":"glycerol fermentation to propane-1,3-diol","type":"exact"}],"termid":"GO:0019589"}


id: MONDO:1012058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative myopathy of obturator-externus, non-human animal","termid":"MONDO:1011788"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myopathy of obturator-externus, dog","secondary_identifiers":["OMIA:000265-9615"],"termid":"MONDO:1012058","xrefs":{"Monarch":{"xref_id":"1012058"}}}


id: FYPO:0002218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and have germ tubes with normal morphology (i.e. size, shape, and structure) that do not septate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, normal unseptated germ tube morphology (obsolete FYPO:0002218)","synonyms":[{"name":"inviable germinated spore population, normal unseptated germ tube morphology","type":"exact"}],"termid":"FYPO:0002218"}


id: PBO:0084213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric protein that is packaged into COPII vesicles; cycles between the ER and Golgi; involved in secretory transport but not directly required for aspects of transport assayed in vitro; may influence membrane composition","termid":"PBO:0084213"}


id: PBO:0005384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chk1 protein kinase","termid":"PBO:0005384"}


id: PBO:0045352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOP1 leucine zipper like protein A","termid":"PBO:0045352"}


id: GO:0070820
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory granule that contains cathepsin and gelatinase and is readily exocytosed upon cell activation; found primarily in mature neutrophil cells.","definition_xrefs":["GOC:mah","PMID:12070036","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"tertiary granule","synonyms":[{"name":"gelatinase granule","type":"exact"}],"termid":"GO:0070820"}


id: PBO:0047907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(8)(q24.3)","termid":"PBO:0047907"}


id: PBO:0120300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2R2B antisense RNA 2","termid":"PBO:0120300"}


id: MONDO:0003598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the median nerve, from its origin at the brachial plexus to its termination in the hand. Clinical features include weakness of wrist and finger flexion, forearm pronation, thenar abduction, and loss of sensation over the lateral palm, first three fingers, and radial half of the ring finger. Common sites of injury include the elbow, where the nerve passes through the two heads of the pronator teres muscle (pronator syndrome) and in the carpal tunnel (carpal tunnel syndrome).","definition_xrefs":["MESH:D020423"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuritis of upper limb","termid":"MONDO:0003607"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"median nerve neuropathy","secondary_identifiers":["UMLS:C0751922","ICD9:354.1","SCTID:397828008","DOID:571","MEDGEN:199766"],"synonyms":[{"name":"median nerve palsy","type":"related"},{"name":"median nerve peripheral neuropathy","type":"exact"},{"name":"median neuropathy","type":"exact"},{"name":"peripheral neuropathy of median nerve","type":"exact"}],"termid":"MONDO:0003598","xrefs":{"Monarch":{"xref_id":"0003598"}}}


id: MONDO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood-onset epilepsy that is characterized by frequent seizures of multiple types, including nocturnal focal motor and fronto-parietal opercular seizures, and daytime focal motor seizures with negative myoclonus and atypical absence seizures. Centrotemporal sharp waves are seen on EEG. During the phase of the epilepsy when seizures are frequent, neuropsychological deficits and motor impairment may be present. These deficits improve when seizures remit.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"atypical childhood epilepsy with centrotemporal spikes","synonyms":[{"name":"atonic-benign childhood epilepsy with centrotemporal spikes","type":"exact"},{"name":"atypical benign partial epilepsy of childhood","type":"exact"},{"name":"pseudo-Lennox syndrome","type":"exact"}],"termid":"MONDO:0100020","xrefs":{"Monarch":{"xref_id":"0100020"}}}


id: PBO:0065582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 6","termid":"PBO:0065582"}


id: MONDO:0011292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dermatitis, atopic (obsolete MONDO:0011292)","termid":"MONDO:0011292","xrefs":{"Monarch":{"xref_id":"0011292"}}}


id: GO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which decreases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"},{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"negative regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003108"}


id: PR:G2TRU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.17","synonyms":[{"name":"Spom972h-wtf15","type":"exact"}],"termid":"PR:G2TRU7"}


id: GO:0003924
data:
  {"annotated_genes":["SJAG_02171","SJAG_04940","SJAG_01558","SJAG_00659","SJAG_02384","SJAG_01851","SJAG_02292","SJAG_03374","SJAG_01769","SJAG_02331","SJAG_00424","SJAG_02366","SJAG_04666","SJAG_02824","SJAG_04531","SJAG_03371","SJAG_03676","SJAG_00466","SJAG_01379","SJAG_03342","SJAG_03732","SJAG_02302","SJAG_04679","SJAG_00430","SJAG_02605","SJAG_00457","SJAG_01655","SJAG_05332","SJAG_03137","SJAG_02353","SJAG_01339","SJAG_03461","SJAG_02444","SJAG_00231","SJAG_04003","SJAG_03453","SJAG_04509","SJAG_01456","SJAG_03072","SJAG_03688","SJAG_02856","SJAG_01449","SJAG_03846","SJAG_02601","SJAG_00344","SJAG_00663","SJAG_04004","SJAG_04157","SJAG_04343","SJAG_00923","SJAG_03684","SJAG_00414","SJAG_01277","SJAG_04375","SJAG_00065","SJAG_02848","SJAG_00906","SJAG_01696","SJAG_00031","SJAG_02640","SJAG_01774","SJAG_04862","SJAG_04351","SJAG_00983","SJAG_01929","SJAG_05030","SJAG_03915","SJAG_02656","SJAG_02265","SJAG_01391","SJAG_02684","SJAG_02180","SJAG_02595","SJAG_02233","SJAG_00226","SJAG_04470","SJAG_01438"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58416,60138,61118,61756,62332,63993,65517,66586,66914,67805,68281,68349,69124,69136,70994,71246,71915,71941,72202,72620,72697,72946,73275,73358,73405,73589,74229,74260,74418,74590,74764,75186,75217,75930,76096,76304,76314,76535,76679,76799,77086,77440,77753,77783,78040,78281,78327,78933,78955,79210,79332,79359,79384,79686,79709,79823,80265,81217,81579,81670,81991,82254,82271,82327,98047,100245,101592,103199,105528,109413,115961,120500],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[71287,92800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003925"},{"annotations":[106619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061791"},{"annotations":[101921,104725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + H2O = GDP + H+ + phosphate.","definition_xrefs":["PMID:26832457","PMID:27218782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase 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activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-170685","Reactome:R-HSA-8981353","Reactome:R-HSA-380979","Reactome:R-HSA-983422","Reactome:R-HSA-5638006","MetaCyc:RXN0-5462","Reactome:R-HSA-5389839","Reactome:R-HSA-5419279","Reactome:R-HSA-8854255","Reactome:R-HSA-8868661","Reactome:R-HSA-418574","Reactome:R-HSA-6814833","Reactome:R-HSA-9640195","Reactome:R-HSA-5389842","Reactome:R-HSA-9018814","Reactome:R-HSA-8847883","Reactome:R-HSA-8849082","Reactome:R-HSA-392212","Reactome:R-HSA-170686","Reactome:R-HSA-8982021","Reactome:R-HSA-1458485","Reactome:R-HSA-8847534","Reactome:R-HSA-8854173","Reactome:R-HSA-9018826","Reactome:R-HSA-177501","Reactome:R-HSA-5694527","Reactome:R-HSA-1445143","Reactome:R-HSA-203973","Reactome:R-HSA-392133","Reactome:R-HSA-5623513","Reactome:R-HSA-5672017","Reactome:R-HSA-2130641","GO:0061745","Reactome:R-HSA-5419273","Reactome:R-HSA-5333615","Reactome:R-HSA-165055","Reactome:R-HSA-555065","Reactome:R-HSA-6807877","Reactome:R-HSA-8854604","Reactome:R-HSA-418582","Reactome:R-HSA-421835","Reactome:R-HSA-2584246","Reactome:R-HSA-156923","Reactome:R-HSA-2130725","Reactome:R-HSA-8854329","RHEA:19669","Reactome:R-HSA-170666","Reactome:R-HSA-432707","Reactome:R-HSA-8854612","Reactome:R-HSA-9649736","Reactome:R-HSA-5658231","Reactome:R-HSA-167415","Reactome:R-HSA-428941","Reactome:R-HSA-8982020","Reactome:R-HSA-164381","Reactome:R-HSA-8982025","Reactome:R-HSA-5665809","Reactome:R-HSA-9645598"],"synonyms":[{"name":"ARF 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activity","type":"narrow"},{"name":"protein-synthesizing GTPase activity, elongation","type":"narrow"},{"name":"protein-synthesizing GTPase activity, initiation","type":"narrow"},{"name":"protein-synthesizing GTPase activity, termination","type":"narrow"},{"name":"signal-recognition-particle GTPase activity","type":"narrow"},{"name":"small monomeric GTPase activity","type":"narrow"},{"name":"tubulin GTPase activity","type":"narrow"}],"termid":"GO:0003924","terms_by_termid":{"GO:0003924":null,"GO:0003925":null,"GO:0061791":null,"GO:1990606":null}}


id: GO:0070904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of L-ascorbic acid from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transepithelial L-ascorbic acid transport (obsolete GO:0070904)","synonyms":[{"name":"transepithelial L-ascorbate transport","type":"exact"},{"name":"transepithelial vitamin C transport","type":"exact"}],"termid":"GO:0070904"}


id: MONDO:1010568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, domestic cat","secondary_identifiers":["OMIA:000278-9685"],"termid":"MONDO:1010568","xrefs":{"Monarch":{"xref_id":"1010568"}}}


id: PBO:0053838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1103","termid":"PBO:0053838"}


id: PBO:0071541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 6","termid":"PBO:0071541"}


id: PBO:0071005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 7","termid":"PBO:0071005"}


id: GO:1903482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903482)","synonyms":[{"name":"activation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"activation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"activation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"positive regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"positive regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up-regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"upregulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903482"}


id: GO:0010347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-galactose-1-phosphate + H2O = L-galactose + phosphate.","definition_xrefs":["PMID:15550539","PMID:16595667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-galactose-1-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXNQT-4142","RHEA:26349"],"termid":"GO:0010347"}


id: MONDO:0011498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation of DISC1 on chromosome 1q42.2.","definition_xrefs":["DOID:0070085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia, susceptibility to","termid":"MONDO:0100182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia 9","secondary_identifiers":["MEDGEN:346728","OMIM:604906","UMLS:C1858050"],"synonyms":[{"name":"SCZD9","type":"exact"},{"name":"schizophrenia 9","type":"exact"},{"name":"schizophrenia 9 with or without an affective disorder","type":"related"},{"name":"schizophrenia 9, susceptibility to","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 1Q42-related","type":"related"},{"name":"schizophrenia type 9","type":"exact"}],"termid":"MONDO:0011498","xrefs":{"Monarch":{"xref_id":"0011498"}}}


