# terms

id: PBO:0048413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA2 antisense RNA 1","termid":"PBO:0048413"}


id: PBO:0084145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity inorganic phosphate (Pi) transporter; also low-affinity manganese transporter; regulated by Pho4p and Spt7p; mutation confers resistance to arsenate; exit from the ER during maturation requires Pho86p; cells overexpressing Pho84p accumulate heavy metals but do not develop symptoms of metal toxicity","termid":"PBO:0084145"}


id: MONDO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor that grows from a nerve or is composed of nerve cells and nerve fibers.","definition_xrefs":["NCIT:C3275"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nervous system benign neoplasm","termid":"MONDO:0000648"},{"relation_name":"excluded_subClassOf","term_name":"nerve sheath neoplasm","termid":"MONDO:0002547"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroma","secondary_identifiers":["EFO:0009619","MESH:D009463","ICDO:9570/0","SCTID:443892003","MEDGEN:14352","UMLS:C0027858","DOID:2001","ICD9:215.9"],"termid":"MONDO:0002173","xrefs":{"Monarch":{"xref_id":"0002173"}}}


id: MONDO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unexplained symptoms reported by veterans of the Persian Gulf War with Iraq in 1991. The symptoms reported include fatigue, skin rash, muscle and joint pain, headaches, loss of memory, shortness of breath, gastrointestinal and respiratory symptoms, and extreme sensitivity to commonly occurring chemicals. (Nature 1994 May 5;369(6475):8)","definition_xrefs":["MESH:D018923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persian gulf syndrome","secondary_identifiers":["EFO:0007430","UMLS:C0282550","DOID:4491","MEDGEN:84396","SCTID:95877004","ICD9:300.89"],"synonyms":[{"name":"Gulf war syndrome","type":"exact"}],"termid":"MONDO:0005907","xrefs":{"Monarch":{"xref_id":"0005907"}}}


id: MONDO:0006605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermotosis of scalp","definition_xrefs":["EFO:1000761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scalp dermatosis","secondary_identifiers":["DOID:3136","UMLS:C0036271","MEDGEN:19882","MESH:D012536","SCTID:402694007"],"synonyms":[{"name":"dermatosis of scalp","type":"exact"}],"termid":"MONDO:0006605","xrefs":{"Monarch":{"xref_id":"0006605"}}}


id: PBO:0077428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 165","termid":"PBO:0077428"}


id: PBO:0026724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_H2A_in_cell","termid":"PBO:0026724"}


id: MONDO:0007803
data:
  {"annotated_genes":["SJAG_02274","SJAG_01236"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010080"},{"annotations":[88041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"}]},"cv_name":"mondo","definition":"Multiple system atrophy (MSA) is a neurodegenerative disorder characterized by autonomic failure (cardiovascular and/or urinary), parkinsonism, cerebellar impairment and corticospinal signs with a median survival of 6-9 years.","definition_xrefs":["Orphanet:102"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary orthostatic hypotension","termid":"MONDO:0015914"},{"relation_name":"is_a","term_name":"synucleinopathy","termid":"MONDO:0000510"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01236":null,"SJAG_02274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"multiple system atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1472","DOID:4752","NANDO:1200034","EFO:1001050","NCIT:C84909","UMLS:C0393571","MedDRA:10064060","MEDGEN:98276","MESH:D019578","GARD:7079","icd11.foundation:1890931931"],"synonyms":[{"name":"MSA","type":"exact"},{"name":"Shy-Drager syndrome","type":"exact"},{"name":"Shy-dragger syndrome (formerly)","type":"related"},{"name":"autonomic failure, Pure","type":"related"},{"name":"hypotension, orthostatic","type":"related"},{"name":"multisystem atrophy","type":"exact"},{"name":"susceptibility to multiple system atrophy 1","type":"related"}],"termid":"MONDO:0007803","terms_by_termid":{"MONDO:0010080":null,"MONDO:0014889":null},"xrefs":{"Monarch":{"xref_id":"0007803"}}}


id: PBO:0063704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 3","termid":"PBO:0063704"}


id: PBO:0117024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3146","termid":"PBO:0117024"}


id: GO:0044582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butanol.","definition_xrefs":["PMID:19539744","GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"1-butanol biosynthetic process","termid":"GO:0071271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0006790","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butanol","synonyms":[{"name":"butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:0044582"}


id: GO:0015520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out).","definition_xrefs":["TC:2.A.1.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetracycline transmembrane transporter activity","termid":"GO:0008493"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"tetracycline:proton antiporter activity","synonyms":[{"name":"tetracyclin:hydrogen antiporter activity","type":"exact"},{"name":"tetracyclin:proton antiporter activity","type":"exact"},{"name":"tetracycline:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015520"}


id: PBO:0064893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B''beta","termid":"PBO:0064893"}


id: PBO:0030233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus","termid":"PBO:0030233"}


id: PBO:0063065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 4 (inactive)","termid":"PBO:0063065"}


id: PBO:0075402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm autoantigenic protein 17 pseudogene 1","termid":"PBO:0075402"}


id: PBO:0051873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isthmin 1","termid":"PBO:0051873"}


id: PBO:0117072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PALM2AKAP2 antisense RNA 1","termid":"PBO:0117072"}


id: GO:0032478
data:
  {"annotated_genes":["SJAG_01865","SJAG_04568"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93780,115743],"is_not":false,"summary":null,"term":"GO:0032478"}]},"cv_name":"cellular_component","definition":"A heterotetrameric complex located in the mitochondrial inner membrane that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms. In S. pombe it is a heterotetramer of Dlp1 and Dps1.","definition_xrefs":["PMID:14519123","PMID:16262699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyl diphosphate synthase complex","termid":"GO:0032476"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01865":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"heterotetrameric polyprenyl diphosphate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterotetrameric decaprenyl diphosphate synthase complex","type":"narrow"}],"termid":"GO:0032478","terms_by_termid":{"GO:0032478":null}}


id: GO:1902237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["PMID:20160352","GOC:BHF","GOC:rl","GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902235"},{"relation_name":"is_a","term_name":"positive regulation of response to endoplasmic reticulum stress","termid":"GO:1905898"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of ER stress-induced apoptosis","type":"narrow"},{"name":"activation of apoptosis in response to ER stress","type":"narrow"},{"name":"activation of apoptosis triggered by ER stress","type":"narrow"},{"name":"activation of endoplasmic reticulum stress-induced apoptosis","type":"narrow"},{"name":"activation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress-induced apoptosis","type":"exact"},{"name":"positive regulation of apoptosis in response to ER stress","type":"exact"},{"name":"positive regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"positive regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of ER stress-induced apoptosis","type":"exact"},{"name":"up regulation of apoptosis in response to ER stress","type":"exact"},{"name":"up regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"up regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of ER stress-induced apoptosis","type":"exact"},{"name":"up-regulation of apoptosis in response to ER stress","type":"exact"},{"name":"up-regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"up-regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of ER stress-induced apoptosis","type":"exact"},{"name":"upregulation of apoptosis in response to ER stress","type":"exact"},{"name":"upregulation of apoptosis triggered by ER stress","type":"exact"},{"name":"upregulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1902237"}


id: PBO:0016570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin, mitochondrial membrane organization protein (predicted)","termid":"PBO:0016570"}


id: MONDO:0022557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Behrens Baumann dust syndrome","secondary_identifiers":["MESH:C537670","GARD:4021","MEDGEN:444092","UMLS:C2931582"],"synonyms":[{"name":"Behrens-Baumann-Vogel syndrome","type":"exact"},{"name":"microphthalmia-optic nerve dysplasia","type":"related"},{"name":"oculo-cerebral dysplasia","type":"exact"},{"name":"unilateral aplasia of the optic nerve with cryptophthalmus and contralateral microphthalmus","type":"related"}],"termid":"MONDO:0022557","xrefs":{"Monarch":{"xref_id":"0022557"}}}


id: PBO:0057723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-8","termid":"PBO:0057723"}


id: PR:Q9P6I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc16 gene.","definition_xrefs":["UniProtKB:Q9P6I1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.09","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc16","type":"exact"},{"name":"ubiquitin carrier protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I1"}


id: PBO:0050227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 5","termid":"PBO:0050227"}


id: GO:0071433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of cell wall organization that results in the restoration of the cell wall following damage.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall repair","termid":"GO:0071433"}


id: GO:0001227
data:
  {"annotated_genes":["SJAG_00987","SJAG_04584","SJAG_02048","SJAG_04009","SJAG_05343","SJAG_00124","SJAG_04813","SJAG_03473","SJAG_02730","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62545,70535,82334,95247,96677,106403,106411,108221,110789,112879],"is_not":false,"summary":null,"term":"GO:0001227"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity, RNA polymerase II-specific","termid":"GO:0000981"},{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00792":null,"SJAG_00987":null,"SJAG_02048":null,"SJAG_02730":null,"SJAG_03473":null,"SJAG_04009":null,"SJAG_04584":null,"SJAG_04813":null,"SJAG_05343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0001217","GO:0003700","GO:0003674","GO:0140110"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity, RNA polymerase II-specific","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0001078","GO:0001210","GO:0001214","GO:0001206"],"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"RNA polymerase II distal enhancer sequence-specific DNA-binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"exact"},{"name":"RNA polymerase II transcriptional repressor activity, metal ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcriptional repressor activity, metal ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"distal enhancer DNA-binding transcription repressor activity, RNA polymerase II-specific","type":"narrow"},{"name":"metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"proximal promoter DNA-binding transcription repressor activity, RNA polymerase II-specific","type":"narrow"},{"name":"sequence-specific distal enhancer binding RNA polymerase II transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding","type":"narrow"},{"name":"transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding","type":"exact"},{"name":"transcriptional repressor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0001227","terms_by_termid":{"GO:0001227":null}}


id: MONDO:0024666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of epithelial skin neoplasm without malignant characteristics.","definition_xrefs":["MONDO:patterns/benign"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"epithelial skin neoplasm","termid":"MONDO:0021634"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign epithelial skin neoplasm","secondary_identifiers":["NCIT:C7341","UMLS:C0345981","MEDGEN:83395"],"synonyms":[{"name":"benign epithelial skin neoplasm","type":"exact"},{"name":"benign epithelial skin tumor","type":"exact"},{"name":"benign epithelial skin tumour","type":"exact"},{"name":"benign skin epithelium neoplasm","type":"exact"},{"name":"benign skin epithelium tumor","type":"exact"},{"name":"benign skin epithelium tumour","type":"exact"},{"name":"epithelial skin neoplasm, benign","type":"exact"}],"termid":"MONDO:0024666","xrefs":{"Monarch":{"xref_id":"0024666"}}}


id: PBO:0003867
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.24.64","termid":"PBO:0003867"}


id: PBO:0069366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 626, pseudogene","termid":"PBO:0069366"}


id: PBO:0119668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 5","termid":"PBO:0119668"}


id: GO:0140889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of nucleosomes during DNA replication to allow the replication machinery to access the DNA.","definition_xrefs":["PMID:35308047","PMID:34471130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"DNA replication-dependent chromatin disassembly","termid":"GO:0140889"}


id: PATO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000496 phase value (obsolete PATO:0000496)","termid":"PATO:0000496"}


id: PBO:0063083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate synthase 2","termid":"PBO:0063083"}


id: PBO:0004908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific protein Spo2","termid":"PBO:0004908"}


id: GO:2001211
data:
  {"annotated_genes":["SJAG_02380","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113365,117481],"is_not":false,"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of isopentenyl diphosphate biosynthetic process, mevalonate pathway.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:2001210"},{"relation_name":"negatively_regulates","term_name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:0019287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0055086","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of Ac-MVA pathway","type":"exact"},{"name":"negative regulation of acetate-mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"}],"termid":"GO:2001211","terms_by_termid":{"GO:2001211":null}}


id: PBO:0088489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal export complex protein Arx1, peptidase family","termid":"PBO:0088489"}


id: PBO:0043219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLK4 associating serine/arginine rich protein","termid":"PBO:0043219"}


id: PBO:0060607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCBP2 antisense RNA 1","termid":"PBO:0060607"}


id: MONDO:0026762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Wieacker-Wolff syndrome (spectrum)","termid":"MONDO:0025445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wieacker-Wolff syndrome, female-restricted","secondary_identifiers":["UMLS:C5393303","OMIM:301041","DOID:0061015","MEDGEN:1715791"],"synonyms":[{"name":"WIEACKER-WOLFF SYNDROME, FEMALE-RESTRICTED","type":"related"},{"name":"WRWFFR","type":"related"},{"name":"Wieacker-Wolff syndrome, female-restricted, X-linked dominant","type":"exact"}],"termid":"MONDO:0026762","xrefs":{"Monarch":{"xref_id":"0026762"}}}


id: PR:G2TRM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam5 gene.","definition_xrefs":["UniProtKB:G2TRM7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.18c","synonyms":[{"name":"Spom972h-tam5","type":"exact"},{"name":"transcripts altered in meiosis protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRM7"}


id: FYPO:0003857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mevastatin. Cells stop growing (and may die) at a concentration of mevastatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to mevastatin","synonyms":[{"name":"hypersensitive to mevastatin","type":"exact"},{"name":"sensitive to compactin","type":"exact"},{"name":"sensitive to mevastatin during mitotic cell cycle","type":"related"},{"name":"sensitive to mevastatin during vegetative growth","type":"exact"}],"termid":"FYPO:0003857"}


id: PR:P35551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA 2'-O-methyltransferase fibrillarin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10335:SF0","OMA:SCHPO03507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA 2'-O-methyltransferase fibrillarin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.10c","secondary_identifiers":["UniProtKB:P35551"],"synonyms":[{"name":"Spom972h-FBL","type":"exact"},{"name":"histone-glutamine methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P35551"}


id: PBO:0034229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_negatively_regulating","termid":"PBO:0034229"}


id: PBO:0044420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 4","termid":"PBO:0044420"}


id: FYECO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nitrogen was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited nitrogen","synonyms":[{"name":"nitrogen starvation","type":"related"}],"termid":"FYECO:0000090"}


id: GO:0090551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of manganese.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion starvation","termid":"GO:0180055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese ion starvation","termid":"GO:0090551"}


id: FYPO:0001433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of decamethylenediguanidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to decamethylenediguanidine","synonyms":[{"name":"resistance to Anticoman","type":"exact"},{"name":"resistance to decamethylenediguanidine during mitotic cell cycle","type":"related"},{"name":"resistance to decamethylenediguanidine during vegetative growth","type":"exact"},{"name":"resistant to decamethylenediguanidine","type":"exact"}],"termid":"FYPO:0001433"}


id: GO:0000806
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males.","definition_xrefs":["GOC:mr","PMID:20622855","Wikipedia:XY_sex-determination_system","GOC:mah","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Y chromosome","secondary_identifiers":["Wikipedia:Y_chromosome"],"termid":"GO:0000806"}


id: GO:0005810
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endocytotic transport vesicle (obsolete GO:0005810)","synonyms":[{"name":"endocytotic transport vesicle","type":"exact"}],"termid":"GO:0005810"}


id: GO:0090083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of inclusion body assembly","termid":"GO:0090083"}


id: GO:0098537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Nucleus with two or more lobes connected by a thin filament that contains no internal chromatin. Examples include the nuclei of mature basophils, eosinophils and neutrophils in mice and humans.","definition_xrefs":["GOC:dos","GOC:tfm"],"gene_count":0,"genotype_count":0,"name":"obsolete lobed nucleus (obsolete GO:0098537)","termid":"GO:0098537"}


id: PBO:0012601
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin","termid":"PBO:0012601"}


id: GO:1903534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["GOC:mr","PMID:12018418","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of lactose biosynthetic process","synonyms":[{"name":"regulation of lactose anabolism","type":"exact"},{"name":"regulation of lactose biosynthesis","type":"exact"},{"name":"regulation of lactose formation","type":"exact"},{"name":"regulation of lactose synthesis","type":"exact"}],"termid":"GO:1903534"}


id: GO:0021553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the olfactory nerve over time, from its formation to the mature structure. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GO_REF:0000021","ISBN:0838580343","GOC:cls","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve development","synonyms":[{"name":"CN 1 development","type":"related"},{"name":"cranial nerve 1 development","type":"exact"},{"name":"cranial nerve I development","type":"exact"}],"termid":"GO:0021553"}


id: GO:0032052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bile acid, a steroid carboxylic acids occurring in bile.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"bile acid binding","termid":"GO:0032052"}


id: PBO:0074809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 14A","termid":"PBO:0074809"}


id: PBO:0029645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_at_high_temperature_(obsolete_FYPO:0002075)","termid":"PBO:0029645"}


id: GO:0007560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from an imaginal disc are generated and organized. The imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"},{"relation_name":"part_of","term_name":"metamorphosis","termid":"GO:0007552"},{"relation_name":"part_of","term_name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc morphogenesis","secondary_identifiers":["GO:0007452"],"synonyms":[{"name":"imaginal disc metamorphosis","type":"exact"}],"termid":"GO:0007560"}


id: PBO:0069356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 616, pseudogene","termid":"PBO:0069356"}


id: MONDO:0016457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ptosis - upper ocular movement limitation - absence of lacrimal punctum is a recently described association of absence of the lower lid lacrimal punctum, bilateral ptosis, elevation deficiency of both eyes and mild facial dysmorphism.","definition_xrefs":["Orphanet:228396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ptosis-upper ocular movement limitation-absence of lacrimal punctum syndrome","secondary_identifiers":["GARD:20593","MEDGEN:1378529","UMLS:C4510249"],"termid":"MONDO:0016457","xrefs":{"Monarch":{"xref_id":"0016457"}}}


id: PBO:0052666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 34","termid":"PBO:0052666"}


id: PBO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Moc3","termid":"PBO:0000711"}


id: MONDO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism","termid":"MONDO:0005420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodine hypothyroidism","secondary_identifiers":["ICD9:244.2","UMLS:C0154159","MEDGEN:509535","DOID:5083","SCTID:190279008"],"termid":"MONDO:0003271","xrefs":{"Monarch":{"xref_id":"0003271"}}}


id: PBO:0063523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDYN antisense RNA 1","termid":"PBO:0063523"}


id: MONDO:0013248
data:
  {"annotated_genes":["SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88237],"is_not":false,"summary":null,"term":"MONDO:0013248"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the RAD51C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0005046","MONDO:0002280","MONDO:0021190"],"is_obsolete":false,"name":"Fanconi anemia complementation group O","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111096","UMLS:C3150653","GARD:15656","OMIM:613390","MEDGEN:462003"],"synonyms":[{"name":"FANCO","type":"exact"},{"name":"Fanconi Anemia, complementation group type O","type":"exact"},{"name":"Fanconi anaemia caused by mutation in RAD51C","type":"exact"},{"name":"Fanconi anaemia caused by mutation in Rad51C","type":"exact"},{"name":"Fanconi anaemia complementation group type O","type":"exact"},{"name":"Fanconi anemia caused by mutation in RAD51C","type":"exact"},{"name":"Fanconi anemia caused by mutation in Rad51C","type":"exact"},{"name":"Fanconi anemia complementation group type O","type":"exact"},{"name":"Fanconi anemia, complementation group O","type":"related"},{"name":"RAD51C Fanconi anaemia","type":"exact"},{"name":"RAD51C Fanconi anemia","type":"exact"},{"name":"Rad51C Fanconi anaemia","type":"exact"},{"name":"Rad51C Fanconi anemia","type":"exact"}],"termid":"MONDO:0013248","terms_by_termid":{"MONDO:0013248":null},"xrefs":{"Monarch":{"xref_id":"0013248"}}}


id: MONDO:0013400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, developmental defect during embryogenesis disorder characterized by severe, early-onset, salt-wasting adrenal insufficiency and ambiguous/female external genitalia (irrespective of chromosomal sex) due to mutations in the <i>CYP11A1</i> gene. Milder cases may present delayed onset of adrenal gland dysfunction and genitalia phenotype may range from normal male to female in individuals with 46,XY karyotype. Imaging studies reveal hypoplastic/absent adrenal glands and biochemical findings include low serum cortisol, mineralocorticoids, androgens, and sodium, with elevated potassium levels.","definition_xrefs":["Orphanet:168558"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Congenital adrenal insufficiency with 46, XY sex reversal OR 46,XY disorder of sex development-adrenal insufficiency due to CYP11A1 deficiency","secondary_identifiers":["NCIT:C131422","GARD:17033","OMIM:613743","DOID:0050546","MEDGEN:462405","MESH:C566130","UMLS:C3151055"],"synonyms":[{"name":"46,XY disorder of sex development-adrenal insufficiency due to CYP11A1 deficiency","type":"related"},{"name":"46,XY disorder of sex development-adrenal insufficiency due to CYP11A1 deficiency syndrome","type":"related"},{"name":"XY sex reversal-adrenal failure","type":"exact"},{"name":"XY sex reversal-adrenal failure syndrome","type":"exact"},{"name":"adrenal insufficiency, congenital, with 46,XY SEX reversal, partial or complete","type":"exact"},{"name":"adrenal insufficiency, congenital, with 46XY sex reversal, partial or complete","type":"exact"},{"name":"cholesterol side-chain cleavage deficiency","type":"exact"},{"name":"p450scc deficiency","type":"exact"}],"termid":"MONDO:0013400","xrefs":{"Monarch":{"xref_id":"0013400"}}}


id: PBO:0063501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase catalytic subunit 2","termid":"PBO:0063501"}


id: PBO:0082887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with Pho85p cyclin-dependent kinase (Cdk) to phosphorylate and regulate glycogen synthase, also activates Pho85p for Glc8p phosphorylation; PCL8 has a paralog, PCL10, that arose from the whole genome duplication","termid":"PBO:0082887"}


id: PBO:0040020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 8 pseudogene 1","termid":"PBO:0040020"}


id: PBO:0043963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma N","termid":"PBO:0043963"}


id: PBO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft3","termid":"PBO:0001340"}


id: FYPO:0007080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and occurs as part of the first meiotic nuclear division, is abnormal.","definition_xrefs":["PomBase:mah","PMID:31532702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abnormal initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abnormal initial mitotic SPB separation in meiosis I","type":"exact"}],"termid":"FYPO:0007080"}


id: PBO:0017435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spatially_disjoint_from","termid":"PBO:0017435"}


id: PBO:0038944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase iron containing 1","termid":"PBO:0038944"}


id: PBO:0043043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHODL antisense RNA 1","termid":"PBO:0043043"}


id: MONDO:1012521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral deafness and vestibular dysfunction, non-human animal","termid":"MONDO:1011710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral deafness and vestibular dysfunction, pig","secondary_identifiers":["OMIA:002148-9823"],"termid":"MONDO:1012521","xrefs":{"Monarch":{"xref_id":"1012521"}}}


id: GO:0004758
data:
  {"annotated_genes":["SJAG_04178","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78738,80795],"is_not":false,"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + H+ + palmitoyl-CoA = 3-dehydrosphinganine + CO2 + CoA.","definition_xrefs":["EC:2.3.1.50","RHEA:14761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-palmitoyltransferase activity","termid":"GO:0016454"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"serine C-palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SERINE-C-PALMITOYLTRANSFERASE-RXN","Reactome:R-HSA-428127","KEGG_REACTION:R01281"],"synonyms":[{"name":"3-oxosphinganine synthetase activity","type":"related"},{"name":"SPT","type":"related"},{"name":"serine palmitoyltransferase","type":"broad"}],"termid":"GO:0004758","terms_by_termid":{"GO:0004758":null}}


id: PBO:0073585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2 pseudogene 1","termid":"PBO:0073585"}


id: GO:0048496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of an animal organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of animal organ identity","termid":"GO:0048496"}


id: GO:0030844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intermediate filament depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament depolymerization","termid":"GO:0030842"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"positively_regulates","term_name":"intermediate filament depolymerization","termid":"GO:0045106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"positive regulation of intermediate filament depolymerization","synonyms":[{"name":"activation of intermediate filament depolymerization","type":"narrow"},{"name":"positive regulation of intermediate filament polymerization and/or depolymerization","type":"broad"},{"name":"stimulation of intermediate filament depolymerization","type":"narrow"},{"name":"up regulation of intermediate filament depolymerization","type":"exact"},{"name":"up-regulation of intermediate filament depolymerization","type":"exact"},{"name":"upregulation of intermediate filament depolymerization","type":"exact"}],"termid":"GO:0030844"}


id: PBO:0116692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR548BA host gene","termid":"PBO:0116692"}


id: PBO:0058181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4475","termid":"PBO:0058181"}


id: FYPO:0001942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population in a culture remains in lag phase longer than normal. The onset of exponential growth is thus delayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased duration of lag phase","synonyms":[{"name":"delayed exponential growth","type":"exact"},{"name":"prolonged lag phase","type":"exact"}],"termid":"FYPO:0001942"}


id: PBO:0086743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possible role in iron metabolism and/or amino acid and carbohydrate metabolism; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0086743"}


id: PBO:0057826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3145","termid":"PBO:0057826"}


id: PBO:0116522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase sequence feature types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_model","termid":"PBO:0116522"}


id: PBO:0062621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily A member 1","termid":"PBO:0062621"}


id: PBO:0090920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase Guk1","termid":"PBO:0090920"}


id: MONDO:0011251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","secondary_identifiers":["MESH:C566524","OMIM:602556","UMLS:C1865203","MEDGEN:400705"],"synonyms":[{"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","type":"exact"}],"termid":"MONDO:0011251","xrefs":{"Monarch":{"xref_id":"0011251"}}}


id: PBO:0083433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YIL060W","termid":"PBO:0083433"}


id: PBO:0074864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 49B","termid":"PBO:0074864"}


id: GO:0070165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of adiponectin secretion","termid":"GO:0070163"},{"relation_name":"positively_regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of adiponectin secretion","synonyms":[{"name":"activation of adiponectin secretion","type":"narrow"},{"name":"stimulation of adiponectin secretion","type":"narrow"},{"name":"up regulation of adiponectin secretion","type":"exact"},{"name":"up-regulation of adiponectin secretion","type":"exact"},{"name":"upregulation of adiponectin secretion","type":"exact"}],"termid":"GO:0070165"}


id: PBO:0017461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_pathogen","termid":"PBO:0017461"}


id: MONDO:0032881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 16","secondary_identifiers":["MEDGEN:1684679","GARD:18044","OMIM:618723","UMLS:C5231474","DOID:0080873"],"synonyms":[{"name":"POF16","type":"related"},{"name":"PREMATURE OVARIAN FAILURE 16","type":"related"}],"termid":"MONDO:0032881","xrefs":{"Monarch":{"xref_id":"0032881"}}}


id: PR:O94611
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug65 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 65 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.04","synonyms":[{"name":"Spom972h-mug65","type":"exact"}],"termid":"PR:O94611"}


id: MONDO:0014017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with autism and macrocephaly","secondary_identifiers":["UMLS:C3554373","MEDGEN:767287","OMIM:615032","Orphanet:642675"],"synonyms":[{"name":"AUTS18","type":"related"},{"name":"CHD8 overgrowth syndrome","type":"exact"},{"name":"autism, susceptibility to, 18","type":"exact"},{"name":"autism, susceptibility to, type 18","type":"exact"},{"name":"susceptibility to autism 18","type":"related"}],"termid":"MONDO:0014017","xrefs":{"Monarch":{"xref_id":"0014017"}}}


id: PBO:0082595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class E Vps protein of the ESCRT-III complex; required for sorting of integral membrane proteins into lumenal vesicles of multivesicular bodies, and for delivery of newly synthesized vacuolar enzymes to the vacuole, involved in endocytosis","termid":"PBO:0082595"}


id: PBO:0082497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of adoMet-dependent tRNA methyltransferase complex; required for the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNAs; contains a THUMP domain and a methyltransferase domain; another complex member is Trm112p","termid":"PBO:0082497"}


id: MONDO:0012651
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88669],"is_not":false,"summary":null,"term":"MONDO:0012651"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 58 is a rare, complex subtype of hereditary spastic paraplegia characterized by variable onset of slowly progressive lower limb spasticity and weakness and prominent cerebellar ataxia, associated with gait disturbances, dysarthria, increased deep tendon reflexes and extensor plantar responses. Additional features may include involuntary movements (i.e. clonus, tremor, fasciculations, chorea), decreased vibration sense, oculomotor abnormalities (e.g. nystagmus) and distal amyotrophy in the upper and lower limbs.","definition_xrefs":["Orphanet:397946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic ataxia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050941","MEDGEN:370750","OMIM:611302","UMLS:C1969796","MESH:C566969","GARD:17644"],"synonyms":[{"name":"KIF1C spastic ataxia","type":"exact"},{"name":"SPAX2","type":"exact"},{"name":"SPG58","type":"exact"},{"name":"autosomal recessive spastic ataxia type 2","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 58","type":"related"},{"name":"spastic ataxia 2","type":"exact"},{"name":"spastic ataxia 2, autosomal recessive","type":"related"},{"name":"spastic ataxia caused by mutation in KIF1C","type":"exact"},{"name":"spastic ataxia type 2","type":"exact"}],"termid":"MONDO:0012651","terms_by_termid":{"MONDO:0012651":null},"xrefs":{"Monarch":{"xref_id":"0012651"}}}


id: PATO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's exhibiting an alteration in size, shape or organization of its constituent cells.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplastic","synonyms":[{"name":"dysplasia","type":"narrow"}],"termid":"PATO:0000640"}


id: MONDO:0020126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare peripheral neuropathy.","gene_count":0,"genotype_count":0,"name":"obsolete rare peripheral neuropathy (obsolete MONDO:0020126)","secondary_identifiers":["Orphanet:98496"],"synonyms":[{"name":"rare peripheral neuropathy","type":"exact"}],"termid":"MONDO:0020126","xrefs":{"Monarch":{"xref_id":"0020126"}}}


id: PBO:0113100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; modifies pre-tRNAs at U20a and U20b of the D loop; member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus3p","termid":"PBO:0113100"}


id: GO:0098952
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of spine apparatus membrane (obsolete GO:0098952)","synonyms":[{"name":"intrinsic to spine apparatus membrane","type":"exact"}],"termid":"GO:0098952"}


id: PBO:0028861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_micafungin","termid":"PBO:0028861"}


id: PBO:0086698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; possible Zap1p-regulated target gene induced by zinc deficiency; YJL132W is a non-essential gene","termid":"PBO:0086698"}


id: FYPO:0006681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:19111658","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006681"}


id: GO:1904444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of Sertoli cell barrier.","definition_xrefs":["PMID:18057314","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"establishment of Sertoli cell barrier","termid":"GO:0097368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of Sertoli cell barrier","synonyms":[{"name":"regulation of establishment of BTB","type":"exact"},{"name":"regulation of establishment of SCB","type":"exact"},{"name":"regulation of establishment of blood-testis barrier","type":"exact"}],"termid":"GO:1904444"}


id: MONDO:0010824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome with 46,XY disorder of sex development characterized by variable degrees of intellectual disability, short stature, severe genital anomalies resulting in sexual ambiguity (such as pseudovaginal perineoscrotal hypospadias and persistence of Müllerian structures), and ocular anomalies (microphthalmia, coloboma). Craniofacial peculiarities (coarse features, deep set eyes), spina bifida, imperforate anus, and sensorineural hearing loss were also described. No new cases have been reported since 1994.","definition_xrefs":["Orphanet:2983"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of sex development-intellectual disability syndrome","secondary_identifiers":["MESH:C535693","OMIM:600122","SCTID:719450007","UMLS:C1838611","GARD:4550","MEDGEN:325469"],"synonyms":[{"name":"Male pseudohermaphroditism intellectual disability syndrome, Verloes type","type":"related"},{"name":"Verloes Gillerot Fryns syndrome","type":"related"},{"name":"Verloes syndrome","type":"related"},{"name":"Verloes-Gillerot-Fryns syndrome","type":"exact"},{"name":"disorder of sex development intellectual disability","type":"related"},{"name":"male pseudohermaphroditism/intellectual disability syndrome, Verloes type","type":"related"},{"name":"male pseudohermaphroditism/mental retardation syndrome, Verloes type","type":"related"},{"name":"pseudohermaphroditism-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0010824","xrefs":{"Monarch":{"xref_id":"0010824"}}}


id: GO:1903740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["PMID:25359770","GOC:rn","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidate phosphatase activity (obsolete GO:1903740)","synonyms":[{"name":"activation of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidate phosphatase activity","type":"narrow"},{"name":"activation of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"positive regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"upregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903740"}


id: PBO:0071988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 17","termid":"PBO:0071988"}


id: PBO:0076167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 3","termid":"PBO:0076167"}


id: FYPO:0005759
data:
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id: PBO:0053648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 700","termid":"PBO:0053648"}


id: MONDO:0017914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pure or complex autosomal dominant spastic paraplegia (obsolete MONDO:0017914)","secondary_identifiers":["Orphanet:320342"],"synonyms":[{"name":"Pure or complicated autosomal dominant spastic paraplegia","type":"exact"}],"termid":"MONDO:0017914","xrefs":{"Monarch":{"xref_id":"0017914"}}}


id: PBO:0075035
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-46","termid":"PBO:0075035"}


id: PBO:0088658
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-(protein) hydrolase","termid":"PBO:0088658"}


id: FYPO:0004861
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal galactomannan level","termid":"FYPO:0001079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell wall galactomannan level","synonyms":[{"name":"normal cell wall galactomannan accumulation","type":"related"},{"name":"normal cell wall galactomannan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall galactomannan level during vegetative growth","type":"exact"}],"termid":"FYPO:0004861"}


id: PBO:0044979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 32 (putative)","termid":"PBO:0044979"}


id: GO:0071205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the juxtaparanode region of an axon.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to axon","termid":"GO:0099612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to juxtaparanode region of axon","synonyms":[{"name":"protein localisation to juxtaparanode region of axon","type":"exact"}],"termid":"GO:0071205"}


id: PBO:0060817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 2","termid":"PBO:0060817"}


id: PBO:0088725
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Swf1","termid":"PBO:0088725"}


id: PBO:0078742
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRMT2B antisense RNA 1","termid":"PBO:0078742"}


id: GO:1990329
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex involved in the sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm5s2U) at tRNA wobble positions. In E. coli it consists of a central IscS dimer with the two TusA protomers bound to one of the IscS units each via persulfide (-SSH) groups.","definition_xrefs":["GOC:bhm","PMID:20404999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine desulfurase complex","termid":"GO:1990221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"IscS-TusA complex","termid":"GO:1990329"}


id: GO:0000819
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id: PBO:0068383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 185","termid":"PBO:0068383"}


id: PBO:0049291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 10, pseudogene","termid":"PBO:0049291"}


id: PBO:0089501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ace2","termid":"PBO:0089501"}


id: GO:0044658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of host plasma membrane integrity by formation of a pore, resulting in deregulated ion homeostasis, and cellular dysfunction that can result in cell death.","definition_xrefs":["PMID:7510043","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated pore formation in host plasma membrane","synonyms":[{"name":"pore formation in host plasma membrane","type":"exact"},{"name":"pore formation in membrane of host by symbiont","type":"broad"}],"termid":"GO:0044658"}


id: PBO:0040821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 1","termid":"PBO:0040821"}


id: PR:G2TRN7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.06c gene.","definition_xrefs":["UniProtKB:G2TRN7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ DNA helicase-like protein C212.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.06c","synonyms":[{"name":"Spom972h-SPAC212.06c","type":"exact"}],"termid":"PR:G2TRN7"}


id: MOD:00295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-octanoyl-L-serine.","definition_xrefs":["PubMed:10604470","Unimod:426#S","PubMed:12716131","RESID:AA0290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-octanoylated residue","termid":"MOD:00669"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-octanoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(octanoyloxy)propanoic acid","type":"exact"},{"name":"L-serine octanoate ester","type":"exact"},{"name":"LIPID O-octanoyl serine","type":"exact"},{"name":"O-octanoyl-L-serine","type":"exact"},{"name":"O-octanoylated L-serine","type":"exact"},{"name":"O3-octanoyl-L-serine","type":"exact"},{"name":"OOctSer","type":"exact"},{"name":"Octanoyl","type":"related"},{"name":"octanoyl","type":"related"}],"termid":"MOD:00295"}


id: GO:0046696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that consists of at least three proteins, CD14, TLR4, and MD-2, each of which is glycosylated and which functions as a lipopolysaccharide (LPS) receptor that primes the innate immune response against bacterial pathogens.","definition_xrefs":["PMID:9665271","PMID:11706042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"lipopolysaccharide receptor complex","synonyms":[{"name":"LPS receptor complex","type":"exact"}],"termid":"GO:0046696"}


id: MONDO:0035357
data:
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id: GO:0030656
data:
  {"annotated_genes":["SJAG_02406","SJAG_03538"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115680,90984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"regulation of vitamin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of vitamin metabolism","type":"exact"}],"termid":"GO:0030656","terms_by_termid":{"GO:0090180":null}}


id: GO:0035039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion at fertilization of the inactive sperm nucleus into a male pronucleus with its chromosomes processed for the first zygotic division.","definition_xrefs":["GOC:bf","PMID:11735001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"male pronucleus assembly","synonyms":[{"name":"male pronucleus formation","type":"related"}],"termid":"GO:0035039"}


id: PBO:0005339
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.10","termid":"PBO:0005339"}


id: PBO:0078363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 8-1","termid":"PBO:0078363"}


id: GO:1900351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanofuran biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"is_a","term_name":"regulation of methanofuran metabolic process","termid":"GO:1900354"},{"relation_name":"regulates","term_name":"methanofuran biosynthetic process","termid":"GO:2001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanofuran biosynthetic process","synonyms":[{"name":"regulation of methanofuran biosynthesis","type":"exact"}],"termid":"GO:1900351"}


id: MONDO:0023910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"RAB18 deficiency","termid":"MONDO:0700247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Martsolf syndrome","secondary_identifiers":["UMLS:C0796037","OMIMPS:212720","MEDGEN:208658"],"termid":"MONDO:0023910","xrefs":{"Monarch":{"xref_id":"0023910"}}}


id: GO:0010310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["PMID:14765119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010310"}


id: MONDO:0013264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the OPTN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 12","secondary_identifiers":["OMIM:613435","DOID:0060203","GARD:15663","MEDGEN:462042","UMLS:C3150692"],"synonyms":[{"name":"ALS12","type":"exact"},{"name":"OPTN amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 12","type":"exact"},{"name":"amyotrophic lateral sclerosis 12 with or without frontotemporal dementia","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in OPTN","type":"exact"},{"name":"amyotrophic lateral sclerosis type 12","type":"exact"}],"termid":"MONDO:0013264","xrefs":{"Monarch":{"xref_id":"0013264"}}}


id: PBO:0013829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo-family BRCT domain protein Ppp1 (predicted)","termid":"PBO:0013829"}


id: PBO:0066802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 101","termid":"PBO:0066802"}


id: PBO:0062235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 19 pseudogene","termid":"PBO:0062235"}


id: PBO:0048587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 1","termid":"PBO:0048587"}


id: PBO:0091357
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catabolism of ARginine, after S. cerevisiae","termid":"PBO:0091357"}


id: PR:000050547
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the pxl1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC4F6.12","termid":"PR:000050547"}


id: MOD:00459
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(13)C labeled succinyl group.","definition_xrefs":["Unimod:66#N-term","PubMed:11857757","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(13)C labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4C13), N-term & K","type":"related"},{"name":"Succinyl:13C(4)","type":"related"}],"termid":"MOD:00459"}


id: GO:2001032
data:
  {"annotated_genes":["SJAG_03048","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[109380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of NHEJ","type":"exact"}],"termid":"GO:2001032","terms_by_termid":{"GO:2001033":null,"GO:2001034":null}}


id: GO:0035669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor 4 where the TRAM adaptor mediates transduction of the signal. Toll-like 4 receptors are pattern recognition receptors that bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:14556004","PMID:18297073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"},{"relation_name":"is_a","term_name":"TRAM-dependent toll-like receptor signaling pathway","termid":"GO:0035668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAM-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"TRAM-dependent TLR4 signaling pathway","type":"exact"},{"name":"TRAM-dependent toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0035669"}


id: GO:0008283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:mah","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell population proliferation","synonyms":[{"name":"cell proliferation","type":"related"}],"termid":"GO:0008283"}


id: PBO:0090021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase complex subunit Naa35","termid":"PBO:0090021"}


id: MOD:00866
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to one of several dihydroxylated proline residues, such as (2S,3R,4R)-3,4-dihydroxyproline or (2S,3R,4S)-3,4-dihydroxyproline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated proline","termid":"MOD:00678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated proline","synonyms":[{"name":"Hy2Pro","type":"exact"}],"termid":"MOD:00866"}


id: PR:Q9USN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16A11.03c gene.","definition_xrefs":["UniProtKB:Q9USN2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0652 protein C16A11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.03c","synonyms":[{"name":"Spom972h-SPCC16A11.03c","type":"exact"}],"termid":"PR:Q9USN2"}


id: GO:0086081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of an atrial cardiomyocyte with an AV node cell and contributes to the communication between the two cells.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098631","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"cell adhesive protein binding involved in atrial cardiac muscle cell-AV node cell communication","synonyms":[{"name":"cell adhesive protein binding involved in atrial cardiomyocyte-AV node cell communication","type":"exact"},{"name":"cell adhesive protein binding involved in atrial cardiomyocyte-atrioventricular node cell communication","type":"exact"}],"termid":"GO:0086081"}


id: PBO:0016104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex small subunit Toa2 (predicted)","termid":"PBO:0016104"}


id: PBO:0072911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAND3 pseudogene 1","termid":"PBO:0072911"}


id: PATO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000721 absolute yield value (obsolete PATO:0000721)","termid":"PATO:0000721"}


id: PBO:0045395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 2 pseudogene 2","termid":"PBO:0045395"}


id: PBO:0030299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle","termid":"PBO:0030299"}


id: GO:0110091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["GOC:sl","PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"},{"relation_name":"negatively_regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hippocampal neuron apoptotic process","termid":"GO:0110091"}


id: PATO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001104 strain value (obsolete PATO:0001104)","termid":"PATO:0001104"}


id: GO:0099186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of synapse","termid":"GO:0098918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of postsynapse","termid":"GO:0099186"}


id: PBO:0080091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 53","termid":"PBO:0080091"}


id: SO:0000798
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"TE that has been modified by manipulations in vitro.","definition_xrefs":["FB:mc"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_transposable_element","synonyms":[{"name":"engineered transposable element","type":"exact"}],"termid":"SO:0000798"}


id: PBO:0005896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal small subunit (predicted)","termid":"PBO:0005896"}


id: PBO:0054747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2156","termid":"PBO:0054747"}


id: PBO:0081327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 121","termid":"PBO:0081327"}


id: PBO:0027274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription_elongation_from_RNA_polymerase_II_promoter","termid":"PBO:0027274"}


id: PBO:0111856
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 subfamily","termid":"PBO:0111856"}


id: GO:1903709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an uterine gland over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","GOC:TermGenie","PMID:23619340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine gland development","synonyms":[{"name":"endometrial gland development","type":"exact"},{"name":"endometrium gland development","type":"exact"},{"name":"glandulae uterinae development","type":"related"},{"name":"glandular part of endometrium development","type":"related"},{"name":"set of uterine glands development","type":"related"},{"name":"uterine glands development","type":"exact"},{"name":"uterine glands set development","type":"exact"}],"termid":"GO:1903709"}


id: PBO:0067777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 77","termid":"PBO:0067777"}


id: PBO:0090966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp10","termid":"PBO:0090966"}


id: MONDO:1012067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia with dyskeratosis and progressive alopecia, non-human animal","termid":"MONDO:1011688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyserythropoietic anemia with dyskeratosis and progressive alopecia, cattle","secondary_identifiers":["OMIA:000313-9913"],"termid":"MONDO:1012067","xrefs":{"Monarch":{"xref_id":"1012067"}}}


id: GO:1900847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of naphtho-gamma-pyrone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900846"},{"relation_name":"negatively_regulates","term_name":"naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of naphtho-gamma-pyrone biosynthetic process","synonyms":[{"name":"down regulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"down-regulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"downregulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"inhibition of naphtho-gamma-pyrone biosynthetic process","type":"narrow"}],"termid":"GO:1900847"}


id: GO:0180013
data:
  {"annotated_genes":["SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101427],"is_not":false,"summary":null,"term":"GO:0180013"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of a lysophosphatidylserine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:34645814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lysophosphatidylserine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180013","terms_by_termid":{"GO:0180013":null}}


id: PBO:0042597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 12","termid":"PBO:0042597"}


id: FYPO:0000623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which any process of positive regulation of transcription is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal positive regulation of transcription","synonyms":[{"name":"abnormal activation of gene-specific transcription","type":"related"},{"name":"abnormal activation of transcription, DNA-dependent","type":"narrow"},{"name":"abnormal positive regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"abnormal positive regulation of gene-specific transcription","type":"related"},{"name":"abnormal positive regulation of transcription, DNA-dependent","type":"exact"},{"name":"abnormal stimulation of gene-specific transcription","type":"narrow"},{"name":"abnormal stimulation of transcription, DNA-dependent","type":"narrow"},{"name":"abnormal up regulation of gene-specific transcription","type":"related"},{"name":"abnormal up regulation of transcription, DNA-dependent","type":"exact"},{"name":"abnormal up-regulation of gene-specific transcription","type":"related"},{"name":"abnormal up-regulation of transcription, DNA-dependent","type":"exact"},{"name":"abnormal upregulation of gene-specific transcription","type":"related"},{"name":"abnormal upregulation of transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0000623"}


id: GO:0090661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A box H/ACA ribonucleoprotein complex that contains the RNA component of vertebrate telomerase, the enzyme essential for the replication of chromosome termini in most eukaryotes. This ribonucleoprotein complex is a structural box H/ACA RNP, which does not have the catalytic pseudouridylation function shared by the majority of H/ACA RNPs present in the cell.","definition_xrefs":["GOC:BHF","PMID:22527283","GOC:BHF_telomere","GOC:jbu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"telomerase holoenzyme complex","termid":"GO:0005697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"box H/ACA telomerase RNP complex","termid":"GO:0090661"}


id: FYPO:0003519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular hercynylcysteine sulfoxide level","termid":"FYPO:0003522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"increased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"increased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"increased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0003519"}


id: PATO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An anterior-posterior diameter quality which is relatively small.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased diameter","termid":"PATO:0001715"},{"relation_name":"is_a","term_name":"anterior-posterior diameter","termid":"PATO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased anterior-posterior diameter","synonyms":[{"name":"low anterior-posterior diameter","type":"exact"}],"termid":"PATO:0002042"}


id: PBO:0061497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuritin 1 like","termid":"PBO:0061497"}


id: SO:0000901
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a pseudogene that was created by tandem duplication and unequal crossing over during recombination.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000901 unequally_crossed_over (obsolete SO:0000901)","synonyms":[{"name":"unequally crossed over","type":"exact"}],"termid":"SO:0000901"}


id: GO:0035382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a sterol is transported across a membrane. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"sterol transmembrane transport","synonyms":[{"name":"sterol membrane transport","type":"exact"}],"termid":"GO:0035382"}


id: GO:0035960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ergosterol biosynthetic process by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11533229","PMID:16055745","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035960)","synonyms":[{"name":"regulation of ergosterol anabolism by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol anabolism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthetic process by regulation of transcription from Pol II promoter","type":"related"},{"name":"regulation of ergosterol formation by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol formation by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol synthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol synthesis by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:0035960"}


id: MONDO:0011568
data:
  {"annotated_genes":["SJAG_05182","SJAG_04295","SJAG_05175","SJAG_02139","SJAG_04706"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87419,87420,87421,87422,87423],"is_not":false,"summary":null,"term":"MONDO:0011568"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the SLC17A8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 25","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18112","OMIM:605583","UMLS:C1854158","DOID:0110555","MEDGEN:344221","MESH:C565319"],"synonyms":[{"name":"DFNA25","type":"narrow"},{"name":"SLC17A8 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 25","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 25","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in SLC17A8","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 25","type":"narrow"},{"name":"deafness, autosomal dominant 25","type":"narrow"},{"name":"deafness, autosomal dominant type 25","type":"narrow"}],"termid":"MONDO:0011568","terms_by_termid":{"MONDO:0011568":null},"xrefs":{"Monarch":{"xref_id":"0011568"}}}


id: GO:0150045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic signaling by nitric oxide.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:26311509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"regulates","term_name":"synaptic signaling by nitric oxide","termid":"GO:0099163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic signaling by nitric oxide","termid":"GO:0150045"}


id: PBO:0005695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, rrm type","termid":"PBO:0005695"}


id: MONDO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A factitious disorder that involves a care giver's deliberate exaggeration, fabrication, and/or induce physical, psychological, behavioral, and/or mental health problems in others.","definition_xrefs":["DOID:0060045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factitious disorder","termid":"MONDO:0002103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Munchausen by proxy","secondary_identifiers":["MEDGEN:88372","UMLS:C0085277","MESH:D016735","SCTID:95637005"],"synonyms":[{"name":"Munchausen by proxy syndrome","type":"exact"},{"name":"Munchausen syndrome by proxy","type":"exact"}],"termid":"MONDO:0000597","xrefs":{"Monarch":{"xref_id":"0000597"}}}


id: PBO:0058420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4789","termid":"PBO:0058420"}


id: PBO:0030111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ethionine","termid":"PBO:0030111"}


id: MONDO:0010396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the CDKL5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"atypical Rett syndrome","termid":"MONDO:0017746"},{"relation_name":"is_a","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"CDKL5 disorder","termid":"MONDO:0100039"},{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 2","secondary_identifiers":["MEDGEN:1663579","DOID:0080467","MESH:C564064","GARD:18617","OMIM:300672","Orphanet:505652","UMLS:C4750718"],"synonyms":[{"name":"CDKL5 early infantile epileptic encephalopathy","type":"exact"},{"name":"DEE2","type":"exact"},{"name":"EIEE2","type":"exact"},{"name":"developmental and epileptic encephalopathy 2, X-linked dominant","type":"exact"},{"name":"developmental and epileptic encephalopathy, 2","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in CDKL5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 2","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 2","type":"exact"},{"name":"infantile spasm syndrome, X-linked 2","type":"related"}],"termid":"MONDO:0010396","xrefs":{"Monarch":{"xref_id":"0010396"}}}


id: FYPO:0002476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, cell shape is altered, and cell size remains normal, and in which vacuoles are more visible (usually by microscopy) than normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001312","FYPO:0000005","FYPO:0001985","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"viable vacuolated vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"viable vegetative misshapen vacuolated cell","type":"related"},{"name":"viable, vacuolated, abnormal cell shape, normal cell size during vegetative growth","type":"exact"}],"termid":"FYPO:0002476"}


id: PBO:0072916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class B member 1","termid":"PBO:0072916"}


id: PR:O59835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase delta subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR14303:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.02c","secondary_identifiers":["UniProtKB:O59835"],"synonyms":[{"name":"SPBC12D12.02c","type":"related"},{"name":"Spom972h-POLD4","type":"exact"}],"termid":"PR:O59835"}


id: PBO:0030596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cytosol","termid":"PBO:0030596"}


id: MONDO:0006584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Jaundice that appears during the neonatal period. In the majority of cases, it appears in the first week of life and is classified as physiologic due to accelerated destruction of erythrocytes and liver immaturity. In a minority of cases it is classified as non-physiologic, appearing in the first twenty four hours after birth, and is associated with underlying diseases including hemolytic disorders, polycythemia, and cephalohematoma.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete neonatal jaundice (obsolete MONDO:0006584)","secondary_identifiers":["ICD9:774.5","MESH:D007567","SCTID:387712008","DOID:2383","ICD9:774.6"],"synonyms":[{"name":"neonatal hyperbilirubinemia","type":"exact"},{"name":"neonatal icterus","type":"exact"}],"termid":"MONDO:0006584","xrefs":{"Monarch":{"xref_id":"0006584"}}}


id: MONDO:0013077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Santos syndrome","secondary_identifiers":["MEDGEN:414444","MESH:C567819","OMIM:613005","UMLS:C2751698"],"synonyms":[{"name":"Santos syndrome","type":"exact"},{"name":"fibular agenesis/hypoplasia, oligodactylous clubfeet, and anonychia/nail hypoplasia syndrome","type":"related"}],"termid":"MONDO:0013077","xrefs":{"Monarch":{"xref_id":"0013077"}}}


id: GO:0051415
data:
  {"annotated_genes":["SJAG_00856","SJAG_07018","SJAG_01756","SJAG_02886","SJAG_02761","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102045,102340,102948,108417,118949,119196],"is_not":false,"summary":null,"term":"GO:0051415"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule by the interphase microtubule organizing center during interphase, the stage of cell cycle between successive rounds of chromosome segregation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0044085","GO:0007010","GO:0065003"],"is_obsolete":false,"name":"microtubule nucleation by interphase microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IMTOC-mediated microtubule nucleation during interphase","type":"exact"},{"name":"interphase microtubule nucleation by interphase microtubule organising centre","type":"exact"},{"name":"interphase microtubule nucleation by interphase microtubule organizing center","type":"exact"},{"name":"interphase microtubule organizing center-mediated microtubule nucleation during interphase","type":"exact"},{"name":"microtubule nucleation during interphase by IMTOC","type":"exact"},{"name":"microtubule nucleation during interphase by interphase microtubule organizing center","type":"exact"}],"termid":"GO:0051415","terms_by_termid":{"GO:0051415":null}}


id: SO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Regions of the chromosome that are important for regulating binding of chromosomes to the nuclear matrix.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_regulatory_element","synonyms":[{"name":"chromosomal regulatory element","type":"exact"}],"termid":"SO:0000626"}


id: MONDO:0017486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"radial hemimelia","termid":"MONDO:0019671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"radial hemimelia, unilateral","secondary_identifiers":["Orphanet:295069","icd11.foundation:1956537587"],"synonyms":[{"name":"radial longitidinal meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017486","xrefs":{"Monarch":{"xref_id":"0017486"}}}


id: PBO:0046798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor III, tissue factor","termid":"PBO:0046798"}


id: GO:0031141
data:
  {"annotated_genes":["SJAG_03735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100366],"is_not":false,"summary":null,"term":"GO:0031141"}]},"cv_name":"biological_process","definition":"The process in which a cell initiates conjugation with cellular fusion upon carbon starvation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of conjugation upon nutrient starvation","termid":"GO:0031140"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03735":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"induction of conjugation upon carbon starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031141","terms_by_termid":{"GO:0031141":null}}


id: PBO:0058626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6758","termid":"PBO:0058626"}


id: PBO:0111295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goa_version","termid":"PBO:0111295"}


id: PBO:0079200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 4","termid":"PBO:0079200"}


id: PBO:0000635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G-protein signaling (RGS) domain (predicted)","termid":"PBO:0000635"}


id: GO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine by covalent addition of glutathione to form peptidyl-L-cysteine glutathione disulfide.","definition_xrefs":["RESID:AA0229"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-cysteine glutathione disulfide biosynthetic process from peptidyl-cysteine (obsolete GO:0018118)","synonyms":[{"name":"peptidyl-L-cysteine glutathione disulfide anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulfide formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulfide synthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulphide biosynthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulphide biosynthetic process from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018118"}


id: PBO:0006192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_presence_of","termid":"PBO:0006192"}


id: FYECO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were chilled by placing them on ice.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chilled cells","synonyms":[{"name":"cold","type":"related"},{"name":"ice","type":"related"}],"termid":"FYECO:0000202"}


id: GO:0106251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction N4-acetylcytidine +H2O = cytidine + acetate.","definition_xrefs":["RHEA:62932","GOC:imk","PMID:31964920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N4-acetylcytidine amidohydrolase activity","termid":"GO:0106251"}


id: MONDO:0009761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign lymphatic neoplasm usually arising from the neck and characterized by cystic dilation of the lymphatic vessels.","definition_xrefs":["NCIT:C3724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cystic hygroma","secondary_identifiers":["MedDRA:10058949","MEDGEN:60195","UMLS:C0206620","ICDO:9173/0","SCTID:399882002","EFO:1000888","MESH:D018191","OMIM:257350","DOID:3081","GARD:6234","Orphanet:79486"],"synonyms":[{"name":"cystic hygroma","type":"exact"},{"name":"cystic hygroma, fetal","type":"related"},{"name":"cystic hygroma, foetal","type":"related"},{"name":"cystic lymphangioma","type":"exact"},{"name":"hygroma","type":"exact"},{"name":"macrocystic lymphatic malformation","type":"related"},{"name":"nuchal bleb, familial","type":"related"}],"termid":"MONDO:0009761","xrefs":{"Monarch":{"xref_id":"0009761"}}}


id: PBO:0057933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3659 host gene","termid":"PBO:0057933"}


id: PBO:0069426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 690, pseudogene","termid":"PBO:0069426"}


id: PBO:0048117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucose mutarotase","termid":"PBO:0048117"}


id: MONDO:0012423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MORM syndrome is characterized by the association of intellectual deficit, truncal obesity, retinal dystrophy and micropenis. It has been described in 14 individuals from a consanguineous family. It is transmitted in an autosomal recessive manner. The causative locus has been mapped to chromosome region 9q34.","definition_xrefs":["Orphanet:75858"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORM syndrome","secondary_identifiers":["UMLS:C1857802","GARD:10121","icd11.foundation:1027545274","MEDGEN:341851","OMIM:610156","SCTID:715628009","MESH:C536984"],"synonyms":[{"name":"MORM syndrome","type":"exact"},{"name":"MORMS","type":"related"},{"name":"intellectual disability, truncal obesity, retinal dystrophy and micropenis","type":"related"},{"name":"intellectual disability, truncal obesity, retinal dystrophy, and micropenis syndrome","type":"related"},{"name":"intellectual disability-truncal obesity-retinal dystrophy-micropenis syndrome","type":"exact"},{"name":"mental retardation, truncal obesity, retinal dystrophy and micropenis","type":"related"},{"name":"mental retardation, truncal obesity, retinal dystrophy, and micropenis","type":"exact"},{"name":"mental retardation, truncal obesity, retinal dystrophy, and micropenis syndrome","type":"related"},{"name":"mental retardation-truncal obesity-retinal dystrophy-micropenis syndrome","type":"exact"}],"termid":"MONDO:0012423","xrefs":{"Monarch":{"xref_id":"0012423"}}}


id: PBO:0041815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 1","termid":"PBO:0041815"}


id: PATO:0000641
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000641 deposition defective (obsolete PATO:0000641)","termid":"PATO:0000641"}


id: MONDO:0004748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the lip.","direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip disorder","secondary_identifiers":["MEDGEN:44166","MESH:D008047","DOID:9297","NCIT:C26818","SCTID:90678009","UMLS:C0023760","ICD9:528.5"],"synonyms":[{"name":"disease of lip","type":"exact"},{"name":"disease of lips","type":"exact"},{"name":"disease or disorder of lip","type":"exact"},{"name":"disorder of lip","type":"exact"},{"name":"lip disease","type":"exact"},{"name":"lip disease or disorder","type":"exact"},{"name":"lip disorder","type":"exact"}],"termid":"MONDO:0004748","xrefs":{"Monarch":{"xref_id":"0004748"}}}


id: MONDO:0042965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A subtype of Machado-Joseph disease characterized by resemblance to Hereditary Spastic Paraplegia; however, more research is needed to conclude the relationship between Type V MJD and hereditary spastic paraplegia.","definition_xrefs":["Wikipedia:Machado–Joseph_disease"],"gene_count":0,"genotype_count":0,"name":"obsolete Machado-Joseph disease type 5 (obsolete MONDO:0042965)","secondary_identifiers":["ICD9:334.3"],"synonyms":[{"name":"azorean disease, type V","type":"exact"}],"termid":"MONDO:0042965","xrefs":{"Monarch":{"xref_id":"0042965"}}}


id: GO:0018174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of protein to heme P460.","definition_xrefs":["RESID:AA0266","RESID:AA0271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0065003","GO:0010467","GO:0051604","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"protein-heme P460 linkage","synonyms":[{"name":"protein-haem P460 linkage","type":"exact"}],"termid":"GO:0018174"}


id: PBO:0071637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 1","termid":"PBO:0071637"}


id: PR:O74540
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fmd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.04c","synonyms":[{"name":"FALDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FLD 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSH-FDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fmd3","type":"exact"},{"name":"glutathione-dependent formaldehyde dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74540"}


id: PBO:0017406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, uncharacterized","termid":"PBO:0017406"}


id: PBO:0054263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1648","termid":"PBO:0054263"}


id: PBO:0068025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 330","termid":"PBO:0068025"}


id: PBO:0029845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_acetylation","termid":"PBO:0029845"}


id: PBO:0076846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testin LIM domain protein","termid":"PBO:0076846"}


id: PBO:0038788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase 2","termid":"PBO:0038788"}


id: GO:0006281
data:
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process of restoring DNA after damage. 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id: PBO:0066853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 153","termid":"PBO:0066853"}


id: MONDO:0003660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"adult lymphoma","secondary_identifiers":["DOID:5825","UMLS:C1332206","MEDGEN:233965","NCIT:C7587","NANDO:2100004"],"synonyms":[{"name":"adult lymphoma","type":"exact"},{"name":"lymphoma","type":"broad"},{"name":"lymphoma of adults","type":"exact"}],"termid":"MONDO:0003660","xrefs":{"Monarch":{"xref_id":"0003660"}}}


id: MONDO:0013615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis and dental anomalies","secondary_identifiers":["Orphanet:284149","UMLS:C3280073","GARD:17309","OMIM:614188","MEDGEN:481703"],"synonyms":[{"name":"CRSDA","type":"related"},{"name":"Kreiborg-Pakistani syndrome","type":"exact"},{"name":"craniosynostosis and dental anomalies","type":"exact"},{"name":"craniosynostosis-dental anomalies","type":"related"}],"termid":"MONDO:0013615","xrefs":{"Monarch":{"xref_id":"0013615"}}}


id: MONDO:0008051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tubular aggregate myopathy is a disorder that affects the skeletal muscles. Signs and symptoms typically begin in childhood and worsen over time. The leg muscles are most often affected, but the arm muscles may also be involved. Symptoms include muscle pain, cramping, weakness or stiffness; and exercise-induced muscle fatigue. Affected individuals may have an unusual walking style (gait) or difficulty running, climbing stairs, or getting up from a squatting position. Some individuals develop contractures. This condition may be caused by mutations in the STIM1 or ORAI1 genes. It is usually inherited in an autosomal dominant manner, but autosomal recessive inheritance has also been reported.","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tubular aggregate myopathy","secondary_identifiers":["GARD:3884","MEDGEN:98050","DOID:0080089","OMIMPS:160565","Orphanet:2593","UMLS:C0410207"],"synonyms":[{"name":"TAM1","type":"related"},{"name":"myopathy, tubular aggregate, 1","type":"related"},{"name":"myopathy, tubular aggregate, type 1","type":"exact"},{"name":"tubular aggregate myopathy","type":"exact"}],"termid":"MONDO:0008051","xrefs":{"Monarch":{"xref_id":"0008051"}}}


id: PBO:0050548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPS6 biogenesis of lysosomal organelles complex 2 subunit 3","termid":"PBO:0050548"}


id: MONDO:0700207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient state of hypogonadotropic hypogonadism associated with prolongation of childhood phase of growth, delayed skeletal maturation, delayed and attenuated pubertal growth spurt, and relatively low insulin-like growth factor-1 secretion.","definition_xrefs":["PMID:23087852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutional delay of growth and puberty","secondary_identifiers":["icd11.foundation:1683573263","SCTID:237813007","UMLS:C0342538","MEDGEN:575091"],"termid":"MONDO:0700207","xrefs":{"Monarch":{"xref_id":"0700207"}}}


id: PBO:0075645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty RTK signaling antagonist 4","termid":"PBO:0075645"}


id: PBO:0034585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_vegetative_cell_population_growth_followed_by_return_to_normal_growth_rate","termid":"PBO:0034585"}


id: MONDO:0012211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The CDG (Congenital Disorders of Glycosylation) syndromes are a group of autosomal recessive disorders affecting glycoprotein synthesis. CDG syndrome type If is characterized by psychomotor delay, seizures, failure to thrive, and cutaneous and ocular anomalies.","definition_xrefs":["Orphanet:79323"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"MPDU1-congenital disorder of glycosylation","secondary_identifiers":["OMIM:609180","DOID:0080558","MESH:C535744","SCTID:724096007","NCIT:C126872","GARD:9832","UMLS:C1836669","MEDGEN:322968"],"synonyms":[{"name":"CDG 1F","type":"related"},{"name":"CDG If","type":"related"},{"name":"CDG syndrome type If","type":"exact"},{"name":"CDG-If","type":"exact"},{"name":"CDG1F","type":"exact"},{"name":"CDGIf","type":"exact"},{"name":"MPDU1-CDG","type":"exact"},{"name":"MPDU1-CDG (CDG-If)","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type If","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1F","type":"related"},{"name":"congenital disorder of glycosylation type 1f","type":"exact"},{"name":"congenital disorder of glycosylation type If","type":"exact"},{"name":"congenital disorder of glycosylation, type If","type":"related"}],"termid":"MONDO:0012211","xrefs":{"Monarch":{"xref_id":"0012211"}}}


id: GO:1902072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hypoxia-inducible factor-1alpha signaling pathway.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to hypoxia","termid":"GO:1900038"},{"relation_name":"is_a","term_name":"regulation of hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:1902071"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:0097411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hypoxia-inducible factor-1alpha signaling pathway","synonyms":[{"name":"down regulation of HIF1alpha pathway","type":"exact"},{"name":"down regulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"down regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"down-regulation of HIF1alpha pathway","type":"exact"},{"name":"down-regulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"down-regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"downregulation of HIF1alpha pathway","type":"exact"},{"name":"downregulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"downregulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"inhibition of HIF1alpha pathway","type":"exact"},{"name":"inhibition of hypoxia-inducible factor-1alpha signaling pathway","type":"narrow"},{"name":"inhibition of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"negative regulation of HIF1alpha pathway","type":"exact"},{"name":"negative regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"}],"termid":"GO:1902072"}


id: MONDO:0015362
data:
  {"annotated_genes":["SJAG_03815","SJAG_01522","SJAG_01352","SJAG_02695","SJAG_04567","SJAG_02919","SJAG_05289","SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[87937,87936,87938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[88552,88553,88551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[88233,88232,88234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[87237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[88088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[87613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[88113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[87138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"}]},"cv_name":"mondo","definition":"Autosomal dominant form of distal hereditary motor neuropathy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy","termid":"MONDO:0018894"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01352":null,"SJAG_01522":null,"SJAG_01537":null,"SJAG_02695":null,"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:140465","DOID:0111198","UMLS:C5548212","GARD:19926","OMIMPS:182960","MEDGEN:1787720"],"synonyms":[{"name":"autosomal dominant dHMN","type":"exact"},{"name":"autosomal dominant distal hereditary motor neuropathy","type":"exact"},{"name":"autosomal dominant distal spinal muscular atrophy","type":"exact"},{"name":"distal hereditary motor neuropathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0015362","terms_by_termid":{"MONDO:0008025":null,"MONDO:0010043":null,"MONDO:0011879":null,"MONDO:0012080":null,"MONDO:0013243":null,"MONDO:0013884":null,"MONDO:0015353":null,"MONDO:0030860":null,"MONDO:0060585":null},"xrefs":{"Monarch":{"xref_id":"0015362"}}}


id: PR:Q10337
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- brc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.05c","synonyms":[{"name":"Spom972h-brc1","type":"exact"}],"termid":"PR:Q10337"}


id: GO:0009635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a herbicide stimulus. Herbicides are chemicals used to kill or control the growth of plants.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbicide","synonyms":[{"name":"herbicide susceptibility/resistance","type":"related"}],"termid":"GO:0009635"}


id: PBO:0090298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk33","termid":"PBO:0090298"}


id: PBO:0059687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 53","termid":"PBO:0059687"}


id: PBO:0061256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch receptor 1","termid":"PBO:0061256"}


id: PBO:0036191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0036191"}


id: PATO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being made wider or larger in all dimensions.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated","termid":"PATO:0001571"}


id: PBO:0005454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb2 (predicted)","termid":"PBO:0005454"}


id: GO:0060420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organ growth","termid":"GO:0046620"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart growth","termid":"GO:0060420"}


id: PBO:0028386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028386"}


id: PR:C6Y4B7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC227.19c gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4B7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C227.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.19c","synonyms":[{"name":"Spom972h-SPAC227.19c","type":"exact"}],"termid":"PR:C6Y4B7"}


id: FYPO:0003622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which posttranscriptional addition of a methyl group to the 2'-oxygen atom of the adenine residue at position 41 in an U6 snRNA molecule is abolished.","definition_xrefs":["GO:1990438","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished U6 2'-O-snRNA methylation","termid":"FYPO:0003621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"abolished U6 2'-O-snRNA methylation at residue A41","synonyms":[{"name":"U6 2'-O-snRNA methylation abolished at residue A41 during vegetative growth","type":"exact"},{"name":"U6 2'-O-snRNA methylation at residue A41 abolished","type":"exact"},{"name":"abolished U6 2'-O-snRNA methylation at residue A41 during mitotic cell cycle","type":"related"},{"name":"abolished U6 A41 2'-O-snRNA methylation","type":"exact"}],"termid":"FYPO:0003622"}


id: PBO:0002638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafunctional aromatic polypeptide Aro1 (predicted)","termid":"PBO:0002638"}


id: GO:0110052
data:
  {"annotated_genes":["SJAG_00419","SJAG_04953","SJAG_00365"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97516,101962,108576],"is_not":false,"summary":null,"term":"GO:0110052"}]},"cv_name":"biological_process","definition":"A cellular process that, through single- or multi-step enzymatic reactions, repairs toxic endogenous compounds, formed as by-products of primary metabolism, by converting them into useful metabolites.","definition_xrefs":["GOC:ka","GOC:vw","PMID:23334546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolite repair","termid":"GO:0110051"},{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"toxic metabolite repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110052","terms_by_termid":{"GO:0110052":null}}


id: PBO:0051328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-19 (pseudogene)","termid":"PBO:0051328"}


id: PBO:0051978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 1","termid":"PBO:0051978"}


id: MONDO:0008856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency 27A","secondary_identifiers":["DOID:0111955","OMIM:209950","UMLS:C4011949","MEDGEN:860386","NCIT:C176806"],"synonyms":[{"name":"IFNGR1 deficiency, autosomal recessive","type":"related"},{"name":"IMD27A","type":"related"},{"name":"atypical mycobacterial infection, disseminated","type":"related"},{"name":"atypical mycobacterial infection, familial disseminated","type":"related"},{"name":"atypical mycobacteriosis, familial","type":"related"},{"name":"immunodeficiency 27A","type":"exact"},{"name":"immunodeficiency 27A, Mycobacteriosis, autosomal recessive","type":"related"},{"name":"immunodeficiency 27A, mycobacteriosis, AR","type":"exact"},{"name":"immunodeficiency type 27A","type":"exact"},{"name":"mycobacterial disease, Mendelian susceptibility to","type":"related"}],"termid":"MONDO:0008856","xrefs":{"Monarch":{"xref_id":"0008856"}}}


id: GO:0160273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a 3'-end 2'-phospho-ribonucleotide-RNA = a 3'-end ribonucleotide-RNA + phosphate.","definition_xrefs":["PMID:36180430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0140098","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"RNA 2'-phosphatase activity","synonyms":[{"name":"RNA 2'-Pase activity","type":"exact"},{"name":"Ribonucleic acid 2'-phosphatase activity","type":"exact"}],"termid":"GO:0160273"}


id: GO:1990876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the nuclear pore complex (NPC) that faces the cytoplasm.","definition_xrefs":["PMID:8422679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005643","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic side of nuclear pore","synonyms":[{"name":"cytoplasmic side of NPC","type":"exact"},{"name":"cytoplasmic side of nuclear pore complex","type":"exact"},{"name":"cytoplasmic side of nucleopore","type":"exact"}],"termid":"GO:1990876"}


id: GO:0008983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein L-glutamate = S-adenosyl-L-homocysteine + protein L-glutamate 5-methyl ester; this reaction is the methylation of peptidyl-L-glutamate to form peptidyl-L-glutamate 5-methyl ester.","definition_xrefs":["EC:2.1.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016741","GO:0003824","GO:0016740","GO:0008276"],"is_obsolete":false,"name":"protein-glutamate O-methyltransferase activity","secondary_identifiers":["MetaCyc:CHER-RXN","RESID:AA0072","RHEA:24452"],"synonyms":[{"name":"MCP methyltransferase I","type":"related"},{"name":"MCP methyltransferase II","type":"related"},{"name":"S-adenosyl-L-methionine:protein-L-glutamate O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-glutamyl methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:protein-carboxyl O-methyltransferase activity","type":"related"},{"name":"methyl-accepting chemotaxis protein O-methyltransferase activity","type":"narrow"},{"name":"methyl-accepting chemotaxis protein methyltransferase II","type":"related"},{"name":"protein O-methyltransferase activity","type":"related"},{"name":"protein carboxyl-O-methyltransferase activity","type":"related"},{"name":"protein carboxyl-methylase activity","type":"related"},{"name":"protein carboxylmethyltransferase II","type":"related"},{"name":"protein carboxymethylase activity","type":"related"},{"name":"protein carboxymethyltransferase activity","type":"related"},{"name":"protein glutamate O-methylase activity","type":"exact"},{"name":"protein glutamate O-methyltransferase activity","type":"exact"},{"name":"protein methylase II","type":"related"},{"name":"protein(aspartate)methyltransferase activity","type":"related"},{"name":"protein(carboxyl)methyltransferase activity","type":"related"}],"termid":"GO:0008983"}


id: PBO:0028532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kinked_septum","termid":"PBO:0028532"}


id: PR:Q9HDU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.06c gene.","definition_xrefs":["UniProtKB:Q9HDU9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB2B2.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.06c","synonyms":[{"name":"Spom972h-SPBPB2B2.06c","type":"exact"}],"termid":"PR:Q9HDU9"}


id: PBO:0056636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 13 pseudogene 1","termid":"PBO:0056636"}


id: MONDO:0009550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis without severe ocular involvement (FHHN) is a form of familial primary hypomagnesemia (FPH), characterized by recurrent urinary tract infections, nephrolithiasis, bilateral nephrocalcinosis, renal magnesium (Mg) wasting, hypercalciuria and kidney failure.","definition_xrefs":["Orphanet:31043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocalcinosis","termid":"MONDO:0001567"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis","termid":"MONDO:0017624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"renal hypomagnesemia 3","secondary_identifiers":["GARD:2906","MESH:C537153","SCTID:725033008","MEDGEN:120640","UMLS:C0268448","OMIM:248250","DOID:0060880"],"synonyms":[{"name":"CLDN16 familial primary hypomagnesemia","type":"exact"},{"name":"CLDN16 primary hypomagnesemia","type":"exact"},{"name":"FHHNC without severe ocular involvement","type":"exact"},{"name":"HOMG3","type":"exact"},{"name":"familial primary hypomagnesemia caused by mutation in CLDN16","type":"exact"},{"name":"familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis without severe ocular involvement","type":"exact"},{"name":"hypercalciuria, childhood, self-limiting","type":"related"},{"name":"hypomagnesemia 3, renal","type":"related"},{"name":"hypomagnesemia, familial, with hypercalciuria and nephrocalcinosis","type":"related"},{"name":"hypomagnesemia, familial, with hypercalciuria and nephrocalcinosis hypercalciuria, childhood, self-limiting, included","type":"related"},{"name":"hypomagnesemia, isolated renal","type":"related"},{"name":"hypomagnesemia, primary, due to defect in renal tubular Transport Of magnesium","type":"related"},{"name":"hypomagnesemia, primary, due to defect in renal tubular Transport of magnesium","type":"related"},{"name":"isolated renal hypomagnesemia","type":"exact"},{"name":"magnesium, defect in renal tubular transport of","type":"related"},{"name":"primary hypomagnesemia caused by mutation in CLDN16","type":"exact"},{"name":"primary hypomagnesemia due to defect in renal tubular transport of magnesium","type":"exact"},{"name":"renal hypomagnesemia type 3","type":"exact"}],"termid":"MONDO:0009550","xrefs":{"Monarch":{"xref_id":"0009550"}}}


id: MONDO:0012799
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88130],"is_not":false,"summary":null,"term":"MONDO:0012799"}]},"cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the ACTC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:436962","OMIM:612098","MESH:C567419","DOID:0110317","UMLS:C2677506"],"synonyms":[{"name":"ACTC1 hypertrophic cardiomyopathy","type":"exact"},{"name":"CMH11","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 11","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 11","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 11","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 11","type":"exact"},{"name":"hypertrophic cardiomyopathy 11","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in ACTC1","type":"exact"},{"name":"hypertrophic cardiomyopathy type 11","type":"exact"}],"termid":"MONDO:0012799","terms_by_termid":{"MONDO:0012799":null},"xrefs":{"Monarch":{"xref_id":"0012799"}}}


id: PBO:0062482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily A member 1","termid":"PBO:0062482"}


id: _global:member_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"member_of","termid":"_global:member_of"}


id: PBO:0072147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 24","termid":"PBO:0072147"}


id: GO:1901321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heart induction.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart induction","termid":"GO:0090381"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"positively_regulates","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart induction","synonyms":[{"name":"activation of heart induction","type":"narrow"},{"name":"up regulation of heart induction","type":"exact"},{"name":"up-regulation of heart induction","type":"exact"},{"name":"upregulation of heart induction","type":"exact"}],"termid":"GO:1901321"}


id: PBO:0074553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 6","termid":"PBO:0074553"}


id: PBO:0034785
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear PassenGer","termid":"PBO:0034785"}


id: PBO:0084042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase of the endoplasmic reticulum (ER); negatively regulates COPII vesicle formation; prevents production of vesicles with defective subunits; required for proper discrimination between resident ER proteins and Golgi-bound cargo molecules; functional ortholog of human PGAP1, mutation of which is associated with intellectual disability and encephalopathy","termid":"PBO:0084042"}


id: PATO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality which holds by virtue of extent of the receptiveness of a male to female advances.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptivity","termid":"PATO:0001719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male receptivity","termid":"PATO:0001721"}


id: GO:0040040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of temperature.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermosensory behavior","synonyms":[{"name":"behavioral response to temperature stimulus","type":"exact"},{"name":"behavioural response to temperature stimulus","type":"exact"},{"name":"thermosensory behaviour","type":"exact"}],"termid":"GO:0040040"}


id: GO:0050778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"positively_regulates","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune response","synonyms":[{"name":"stimulation of immune response","type":"narrow"},{"name":"up regulation of immune response","type":"exact"},{"name":"up-regulation of immune response","type":"exact"},{"name":"upregulation of immune response","type":"exact"}],"termid":"GO:0050778"}


id: MONDO:1010667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary thrombopathia associated with a defect in the ADP receptor P2Y12 in dogs due to a variation in the P2Y12 gene.","definition_xrefs":["PMID:36815741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"thrombopathia, non-human animal","termid":"MONDO:1011695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder P2RY12-related, dog","secondary_identifiers":["OMIA:001564-9615"],"termid":"MONDO:1010667","xrefs":{"Monarch":{"xref_id":"1010667"}}}


id: GO:0021708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature Lugaro cell. Differentiation includes the processes involved in commitment of a neuroblast to a Lugaro cell fate. A Lugaro cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph","GOC:cls","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Lugaro cell differentiation","termid":"GO:0021708"}


id: MONDO:0008318
data:
  {"annotated_genes":["SJAG_04394","SJAG_02426","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88387,88388,88389],"is_not":false,"summary":null,"term":"MONDO:0008318"}]},"cv_name":"mondo","definition":"Proteus syndrome (PS) is a very rare and complex hamartomatous overgrowth disorder characterized by progressive overgrowth of the skeleton, skin, adipose, and central nervous systems.","definition_xrefs":["Orphanet:744"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"PTEN hamartoma tumor syndrome","termid":"MONDO:0017623"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"is_obsolete":false,"name":"Proteus syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:23150001","UMLS:C0085261","MEDGEN:39008","OMIM:176920","icd11.foundation:760267333","MESH:D016715","GARD:7475","DOID:13482","NCIT:C85032","ICD9:759.89","NORD:1622"],"synonyms":[{"name":"Elattoproteus syndrome","type":"related"},{"name":"Proteus syndrome","type":"exact"},{"name":"Wiedemann's syndrome","type":"exact"},{"name":"gigantism, partial, of hands and feet, nevi, hemihypertrophy, and macrocephaly","type":"related"},{"name":"hemihypertrophy and macrocephaly","type":"related"},{"name":"partial gigantism of hands and feet, nevi, hemihypertrophy, macrocephaly","type":"related"},{"name":"partial gigantism-nevi-hemihypertrophy-macrocephaly syndrome","type":"exact"},{"name":"proteus syndrome, somatic","type":"exact"}],"termid":"MONDO:0008318","terms_by_termid":{"MONDO:0008318":null},"xrefs":{"Monarch":{"xref_id":"0008318"}}}


id: PBO:0068054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 359","termid":"PBO:0068054"}


id: PBO:0081022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 3","termid":"PBO:0081022"}


id: GO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response","synonyms":[{"name":"activation of defense response","type":"narrow"},{"name":"stimulation of defense response","type":"narrow"},{"name":"up regulation of defense response","type":"exact"},{"name":"up-regulation of defense response","type":"exact"},{"name":"upregulation of defense response","type":"exact"}],"termid":"GO:0031349"}


id: PBO:0036334
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human DLP1","termid":"PBO:0036334"}


id: MONDO:0043237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Painful sensations in the tongue, including a sensation of burning.","definition_xrefs":["MESH:D005926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glossodynia","secondary_identifiers":["UMLS:C0017672","icd11.foundation:1755751917","ICD10CM:K14.6","MEDGEN:6617","SCTID:30731004"],"synonyms":[{"name":"Glossalgias","type":"related"},{"name":"Glossodynias","type":"related"},{"name":"Glossopyroses","type":"related"},{"name":"glossalgia","type":"related"},{"name":"glossodynia","type":"exact"},{"name":"glossopyrosis","type":"related"},{"name":"painful tongue","type":"related"},{"name":"soreness of tongue","type":"related"}],"termid":"MONDO:0043237","xrefs":{"Monarch":{"xref_id":"0043237"}}}


id: FYPO:0003978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and has a nuclear envelope that is broken into multiple small fragments and one or more clusters of nuclear pores present in the cytoplasm during mitotic telophase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"nuclear pore aggregation in cytoplasm","termid":"FYPO:0003974"},{"relation_name":"is_a","term_name":"abnormal nuclear pore localization","termid":"FYPO:0003973"},{"relation_name":"is_a","term_name":"inviable vegetative cell with fragmented nuclear envelope during mitotic telophase","termid":"FYPO:0003976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002403","FYPO:0001985","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable vegetative cell with fragmented nuclear envelope and nuclear pore aggregation in cytoplasm during mitotic telophase","synonyms":[{"name":"inviable cell with fragmented nuclear envelope and nuclear pore aggregation in cytoplasm during mitotic telophase during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with fragmented nuclear envelope and NPC aggregation in cytoplasm during mitotic telophase","type":"exact"},{"name":"inviable vegetative cell with fragmented nuclear envelope and nuclear pore aggregation in cytoplasm during telophase of mitotic cell cycle","type":"related"},{"name":"inviable vegetative cell with fragmented nuclear envelope and nuclear pore complex aggregation in cytoplasm during mitotic telophase","type":"exact"},{"name":"lethal; vegetative cell with fragmented nuclear envelope and nuclear pore aggregation in cytoplasm during mitotic telophase","type":"exact"}],"termid":"FYPO:0003978"}


id: PBO:0052570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2E (inactive)","termid":"PBO:0052570"}


id: GO:1905491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sensory neuron axon guidance.","definition_xrefs":["PMID:16516839","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"is_a","term_name":"regulation of sensory neuron axon guidance","termid":"GO:1905489"},{"relation_name":"positively_regulates","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sensory neuron axon guidance","synonyms":[{"name":"activation of sensory neuron axon guidance","type":"narrow"},{"name":"up regulation of sensory neuron axon guidance","type":"exact"},{"name":"up-regulation of sensory neuron axon guidance","type":"exact"},{"name":"upregulation of sensory neuron axon guidance","type":"exact"}],"termid":"GO:1905491"}


id: PBO:0117055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARS2 antisense RNA 1","termid":"PBO:0117055"}


id: PBO:0041170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 4","termid":"PBO:0041170"}


id: PBO:0056057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia-associated non-coding IGF1R activator RNA 1","termid":"PBO:0056057"}


id: PBO:0042785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 131","termid":"PBO:0042785"}


id: PBO:0005188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switch-activating protein Sap1","termid":"PBO:0005188"}


id: PBO:0038555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 17B, depalmitoylase","termid":"PBO:0038555"}


id: PBO:0052596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 4","termid":"PBO:0052596"}


id: MONDO:0019492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete desmoid tumor (obsolete MONDO:0019492)","termid":"MONDO:0019492","xrefs":{"Monarch":{"xref_id":"0019492"}}}


id: PBO:0047688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 1","termid":"PBO:0047688"}


id: GO:0010462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of light-activated voltage-gated calcium channel activity.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of light-activated voltage-gated calcium channel activity (obsolete GO:0010462)","termid":"GO:0010462"}


id: PBO:0055008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2423","termid":"PBO:0055008"}


id: PBO:0057026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR124-2 host gene","termid":"PBO:0057026"}


id: PBO:0030422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sterol_binding","termid":"PBO:0030422"}


id: GO:1904109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cholesterol import.","definition_xrefs":["PMID:16772292","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"is_a","term_name":"regulation of cholesterol import","termid":"GO:0060620"},{"relation_name":"positively_regulates","term_name":"cholesterol import","termid":"GO:0070508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cholesterol import","synonyms":[{"name":"activation of cholesterol import","type":"narrow"},{"name":"activation of cholesterol uptake","type":"narrow"},{"name":"positive regulation of cholesterol uptake","type":"exact"},{"name":"up regulation of cholesterol import","type":"exact"},{"name":"up regulation of cholesterol uptake","type":"exact"},{"name":"up-regulation of cholesterol import","type":"exact"},{"name":"up-regulation of cholesterol uptake","type":"exact"},{"name":"upregulation of cholesterol import","type":"exact"},{"name":"upregulation of cholesterol uptake","type":"exact"}],"termid":"GO:1904109"}


id: GO:0097247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to epigallocatechin 3-gallate, a compound that is a gallic acid ester of a catechin.","definition_xrefs":["GOC:sl","PMID:21307292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"epigallocatechin 3-gallate binding","synonyms":[{"name":"EGCG binding","type":"exact"},{"name":"catechin gallate binding","type":"broad"}],"termid":"GO:0097247"}


id: MONDO:0009841
data:
  {"annotated_genes":["SJAG_05223"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88053],"is_not":false,"summary":null,"term":"MONDO:0009841"}]},"cv_name":"mondo","definition":"PEHO (Progressive encephalopathy with Edema, Hypsarrhythmia and Optic atrophy) syndrome is a rare neurodegenerative disorder belonging to the group of infantile progressive encephalopathies.","definition_xrefs":["Orphanet:2836"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"PEHO syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:260565","GARD:4264","DOID:0080539","MEDGEN:342404","icd11.foundation:976613527","MESH:C536317","UMLS:C1850055"],"synonyms":[{"name":"infantile Cerebellooptic atrophy","type":"related"},{"name":"peho","type":"related"},{"name":"peho syndrome","type":"exact"},{"name":"peho-like syndrome","type":"related"},{"name":"progressive encephalopathy with edema, hypsarrhythmia and optic atrophy","type":"exact"},{"name":"progressive encephalopathy with edema, hypsarrhythmia, and optic atrophy","type":"related"},{"name":"progressive encephalopathy-optic atrophy syndrome","type":"exact"}],"termid":"MONDO:0009841","terms_by_termid":{"MONDO:0009841":null},"xrefs":{"Monarch":{"xref_id":"0009841"}}}


id: PR:G2TRM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC959.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C959.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.11","synonyms":[{"name":"Spom972h-SPAC959.11","type":"exact"}],"termid":"PR:G2TRM5"}


id: GO:1902865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of embryonic camera-type eye development.","definition_xrefs":["GOC:mr","PMID:16872597","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of embryonic camera-type eye development","termid":"GO:1902863"},{"relation_name":"positively_regulates","term_name":"embryonic camera-type eye development","termid":"GO:0031076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of embryonic camera-type eye development","synonyms":[{"name":"activation of embryonic camera-type eye development","type":"narrow"},{"name":"activation of embryonic eye development","type":"narrow"},{"name":"positive regulation of embryonic eye development","type":"exact"},{"name":"up regulation of embryonic camera-type eye development","type":"exact"},{"name":"up regulation of embryonic eye development","type":"exact"},{"name":"up-regulation of embryonic camera-type eye development","type":"exact"},{"name":"up-regulation of embryonic eye development","type":"exact"},{"name":"upregulation of embryonic camera-type eye development","type":"exact"},{"name":"upregulation of embryonic eye development","type":"exact"}],"termid":"GO:1902865"}


id: FYPO:0001426
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is abnormal, resulting in rereplication of part of the genome.","definition_xrefs":["PomBase:mah","PMID:10388806"],"direct_ancestors":[{"relation_name":"has_output","term_name":"DNA content increased during vegetative growth","termid":"FYPO:0000158"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in partial rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during vegetative growth, resulting in partial rereplication","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in partial rereplication during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in partial re-replication","type":"exact"},{"name":"partial mitotic DNA re-replication","type":"related"},{"name":"partial mitotic DNA rereplication","type":"related"},{"name":"replication origin refiring resulting in local amplification","type":"related"}],"termid":"FYPO:0001426"}


id: PBO:0052747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 39","termid":"PBO:0052747"}


id: PBO:0043020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHM like Rab escort protein","termid":"PBO:0043020"}


id: PR:O94321
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multistep phosphorelay regulator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.02","synonyms":[{"name":"Spom972h-mpr1","type":"exact"}],"termid":"PR:O94321"}


id: GO:0097466
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95490,97657],"is_not":false,"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"An ERAD pathway whereby endoplasmic reticulum (ER)-resident glycoproteins are targeted for degradation. Includes differential processing of the glycoprotein sugar chains, retrotranslocation to the cytosol and degradation by the ubiquitin-proteasome pathway. A glycoprotein is a compound in which a carbohydrate component is covalently bound to a protein component.","definition_xrefs":["GOC:al","PMID:16079177","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"ERAD pathway","termid":"GO:0036503"},{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"ubiquitin-dependent glycoprotein ERAD pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-associated glycoprotein degradation","type":"exact"},{"name":"glycoprotein ERAD","type":"exact"},{"name":"gpERAD","type":"exact"},{"name":"misfolded or incompletely synthesized glycoprotein catabolic process","type":"broad"}],"termid":"GO:0097466","terms_by_termid":{"GO:0097466":null}}


id: PBO:0048925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member V, pseudogene","termid":"PBO:0048925"}


id: FYPO:0003695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer free small ribosomal subunits in the cytosol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytosolic small ribosomal subunit level","synonyms":[{"name":"cytosolic small ribosomal subunit present at decreased level","type":"exact"},{"name":"decreased 40S ribosomal subunit level","type":"exact"},{"name":"decreased cytosolic small ribosomal subunit level during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic small ribosomal subunit level during vegetative growth","type":"exact"},{"name":"decreased level of cytosolic small ribosomal subunits","type":"related"},{"name":"decreased small ribosomal subunit level","type":"broad"},{"name":"reduced cytosolic small ribosomal subunit level","type":"exact"}],"termid":"FYPO:0003695"}


id: MONDO:0018054
data:
  {"annotated_genes":["SJAG_02757","SJAG_00228"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014340"},{"annotations":[88957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015001"}]},"cv_name":"mondo","definition":"An autosomal dominant heart condition that causes disruptions in the heart's normal rhythm. This condition is characterized by uncoordinated electrical activity in the heart's upper chambers (the atria), which causes the heartbeat to become fast and irregular.","direct_ancestors":[{"relation_name":"is_a","term_name":"atrial fibrillation","termid":"MONDO:0004981"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_02757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial atrial fibrillation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:608583","icd11.foundation:45855978","GARD:9740","MEDGEN:894635","UMLS:C3468561","Orphanet:334","SCTID:715395008","DOID:0050650"],"synonyms":[{"name":"ATFB","type":"exact"},{"name":"atrial fibrillation autosomal dominant","type":"related"},{"name":"atrial fibrillation, familial","type":"related"},{"name":"autosomal dominant atrial fibrillation","type":"related"},{"name":"hereditary atrial fibrillation (disease)","type":"exact"}],"termid":"MONDO:0018054","terms_by_termid":{"MONDO:0014340":null,"MONDO:0015001":null},"xrefs":{"Monarch":{"xref_id":"0018054"}}}


id: PBO:0027573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027573"}


id: PBO:0070373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ro60, Y RNA binding protein","termid":"PBO:0070373"}


id: MONDO:1012737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intestinal cobalamin (vitamin B12) malabsorption that occurs in dogs due to a mutation in the CUBN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"intestinal cobalamin (vitamin B12) malabsorption, dog","termid":"MONDO:1012451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intestinal cobalamin (vitamin B12) malabsorption, CUBN-related, dog","secondary_identifiers":["OMIA:001786-9615"],"termid":"MONDO:1012737","xrefs":{"Monarch":{"xref_id":"1012737"}}}


id: PBO:0038584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acyltransferase 1","termid":"PBO:0038584"}


id: GO:0050783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cocaine, an alkaloid obtained from the dried leaves of the shrub Erythroxylon coca. It is a cerebral stimulant and narcotic.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid metabolic process","termid":"GO:0046448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cocaine metabolic process","synonyms":[{"name":"cocaine metabolism","type":"exact"}],"termid":"GO:0050783"}


id: MONDO:0007734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder caused by mutations in the TGIF gene mapped to chromosome 18p11.3. It is characterized by semilobar holoprosencephaly, hypotelorism, and ptosis.","definition_xrefs":["NCIT:C75475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 4","secondary_identifiers":["OMIM:142946","MESH:C564180","UMLS:C1840528","MEDGEN:374488","DOID:0110880"],"synonyms":[{"name":"HPE4","type":"exact"},{"name":"TGIF1 holoprosencephaly","type":"exact"},{"name":"holoprosencephaly 4","type":"exact"},{"name":"holoprosencephaly caused by mutation in TGIF1","type":"exact"},{"name":"holoprosencephaly type 4","type":"exact"}],"termid":"MONDO:0007734","xrefs":{"Monarch":{"xref_id":"0007734"}}}


id: PBO:0069599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 876, pseudogene","termid":"PBO:0069599"}


id: PBO:0091148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidylserine translocation complex subunit Mdm35","termid":"PBO:0091148"}


id: PBO:0058690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6818","termid":"PBO:0058690"}


id: MONDO:0017240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrodysostosis with multiple hormone resistance (obsolete MONDO:0017240)","secondary_identifiers":["Orphanet:280651"],"termid":"MONDO:0017240","xrefs":{"Monarch":{"xref_id":"0017240"}}}


id: PBO:0085396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane permease; mediates uptake of glycerophosphoinositol and glycerophosphocholine as sources of the nutrients inositol and phosphate; expression and transport rate are regulated by phosphate and inositol availability","termid":"PBO:0085396"}


id: GO:0103050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isobutanol + NADP = isobutyraldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isobutyraldehyde reductase activity (obsolete GO:0103050)","termid":"GO:0103050"}


id: MONDO:0008636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Double uterus, hemivagina and renal agenesis is a rare congenital urogenital anomaly characterized by the presence of double uterus (didelphys, bicornuate or septum-complete or partial), unilateral cervico-vaginal obstruction (obstructed hemivagina-communicant, not communicant or septate and unilateral cervical atresia) and ipsilateral renal anomalies (renal agenesis and/or other urinary tract anomalies). Patients are usually diagnosed at puberty after menarche due to recurrent severe dysmenorrhea, chronic pelvic pain, excessive foul smelling mucopurulent discharge, spotting and intermenstrual bleeding (depending on the existence of uterine or vaginal communications). fever, dyspareunia, and a palpable abdominal, pelvic or vaginal mass (mucocolpos or pyocolpos) may also be present.","definition_xrefs":["Orphanet:3411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double uterus-hemivagina-renal agenesis syndrome","secondary_identifiers":["MEDGEN:348132","UMLS:C1860549","SCTID:722431007","MESH:C566010","OMIM:192050","GARD:1910"],"synonyms":[{"name":"Double uterus and obstructed hemivagina syndrome","type":"exact"},{"name":"Herlyn-Werner syndrome","type":"exact"},{"name":"OHVIRA syndrome","type":"exact"},{"name":"Wunderlich syndrome","type":"exact"},{"name":"obstructed hemivagina and ipsilateral renal anomaly","type":"exact"},{"name":"uterus BICORNIS BICOLLIS with partial vaginal septum and unilateral HEMATOCOLPOS with ipsilateral renal agenesis","type":"related"}],"termid":"MONDO:0008636","xrefs":{"Monarch":{"xref_id":"0008636"}}}


id: PBO:0067955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 257","termid":"PBO:0067955"}


id: GO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of D-glucose into the blood by absorption from the small intestine.","definition_xrefs":["PMID:5601832","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal hexose absorption","termid":"GO:0106001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal D-glucose absorption","termid":"GO:0001951"}


id: PBO:0030255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_during_vegetative_growth","termid":"PBO:0030255"}


id: GO:0033820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-glucosyl residue from UDP-glucose to a hydroxymethylcytosine residue in DNA.","definition_xrefs":["EC:2.4.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA alpha-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.26-RXN"],"synonyms":[{"name":"T2-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"T4-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"T6-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"UDP-glucose:DNA alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-DNA alpha-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-deoxyribonucleate alpha-glucosyltransferase activity","type":"related"}],"termid":"GO:0033820"}


id: MONDO:0006311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of clonal hematopoietic disorders that have both myelodysplastic and myeloproliferative features at the time of initial presentation.","definition_xrefs":["NCIT:C27262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"myelodysplastic/myeloproliferative neoplasm","secondary_identifiers":["UMLS:C1301355","MEDGEN:226981","SCTID:445738007","MESH:D054437","ICDO:9975/3","EFO:1000388","DOID:4972","ONCOTREE:MDS%2FMPN"],"synonyms":[{"name":"MDS-MPD","type":"broad"},{"name":"MDS/MPD","type":"broad"},{"name":"MDS/MPN","type":"exact"},{"name":"MPD-MDS","type":"exact"},{"name":"MPD/MDS","type":"exact"},{"name":"myelodysplastic myeloproliferative cancer","type":"exact"},{"name":"myelodysplastic myeloproliferative disease","type":"broad"},{"name":"myelodysplastic/myeloproliferative disease","type":"broad"},{"name":"myelodysplastic/myeloproliferative diseases","type":"broad"},{"name":"myelodysplastic/myeloproliferative disorder","type":"broad"},{"name":"myelodysplastic/myeloproliferative disorders","type":"broad"},{"name":"myelodysplastic/myeloproliferative neoplasm","type":"exact"},{"name":"myelodysplastic/myeloproliferative neoplasms","type":"exact"},{"name":"myeloproliferative/myelodysplastic disorders","type":"broad"},{"name":"myeloproliferative/myelodysplastic syndromes","type":"broad"}],"termid":"MONDO:0006311","xrefs":{"Monarch":{"xref_id":"0006311"}}}


id: MONDO:0009385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperleucine-Isoleucinemia","secondary_identifiers":["SCTID:7046009","MEDGEN:82821","OMIM:238340","UMLS:C0268574","MESH:C562674"],"synonyms":[{"name":"hyperleucine-Isoleucinemia","type":"exact"}],"termid":"MONDO:0009385","xrefs":{"Monarch":{"xref_id":"0009385"}}}


id: PR:P50523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12119:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.07","secondary_identifiers":["UniProtKB:P50523"],"synonyms":[{"name":"SPAC1782.07","type":"related"},{"name":"Spom972h-UQCRQ","type":"exact"},{"name":"complex III subunit 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase complex 11 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50523"}


id: PBO:0058991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motilin receptor","termid":"PBO:0058991"}


id: MONDO:0015724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-distal trisomy 13q is a rare chromosomal anomaly disorder, resulting from the partial duplication of the proximal long arm of chromosome 13, with a highly variable phenotype principally characterized by increased polymorphonuclear leucocyte projections and persistence of fetal hemoglobin, as well as growth and developmental delay and craniofacial dysmorphism (incl. microcephaly, depressed nasal bridge, stubby nose, low-set, malformed ears, cleft lip/palate, micrognathia). Strabismus, clinodactyly and undescended testes in males may also be associated.","definition_xrefs":["Orphanet:1702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 13q trisomy","termid":"MONDO:0022177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-distal trisomy 13q","secondary_identifiers":["GARD:18738","MEDGEN:1637117","SCTID:764996009","UMLS:C4707260"],"synonyms":[{"name":"non-distal duplication 13q","type":"exact"},{"name":"non-distal trisomy type 13q","type":"exact"},{"name":"non-telomeric trisomy 13q","type":"exact"}],"termid":"MONDO:0015724","xrefs":{"Monarch":{"xref_id":"0015724"}}}


id: PBO:0058219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4509-3","termid":"PBO:0058219"}


id: PBO:0047561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 14","termid":"PBO:0047561"}


id: PBO:0026748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_mitotic_S_phase","termid":"PBO:0026748"}


id: PBO:0110031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 3","termid":"PBO:0110031"}


id: MONDO:0015186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare intestinal neoplasm.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of intestine (obsolete MONDO:0015186)","secondary_identifiers":["Orphanet:104011"],"synonyms":[{"name":"rare intestinal neoplasm","type":"exact"},{"name":"rare intestinal tumor","type":"exact"},{"name":"rare tumor of bowel","type":"exact"}],"termid":"MONDO:0015186","xrefs":{"Monarch":{"xref_id":"0015186"}}}


id: PBO:0048149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYN binding protein 1","termid":"PBO:0048149"}


id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04818","PANTHER:PTHR11599:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: PBO:0079415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 9","termid":"PBO:0079415"}


id: GO:0010129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyclohexane-1-carboxylate, a alicyclic acid, in the absence of oxygen.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic cyclohexane-1-carboxylate catabolic process","secondary_identifiers":["MetaCyc:PWY-301"],"synonyms":[{"name":"anaerobic cyclohexane-1-carboxylate breakdown","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate catabolism","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate degradation","type":"exact"}],"termid":"GO:0010129"}


id: GO:0015671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxygen (O2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gas transport","termid":"GO:0015669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"oxygen transport","secondary_identifiers":["Reactome:R-HSA-8981607"],"termid":"GO:0015671"}


id: MONDO:0700167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sebaceous epithelioma occurring in a dog.","definition_xrefs":["NCIT:C176701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine sebaceous gland epithelioma","termid":"MONDO:0700167","xrefs":{"Monarch":{"xref_id":"0700167"}}}


id: SO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a repeating dinucleotide sequence (two bases).","direct_ancestors":[{"relation_name":"is_a","term_name":"microsatellite","termid":"SO:0000289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dinucleotide_repeat_microsatellite_feature","synonyms":[{"name":"dinucleotide repeat microsatellite","type":"exact"},{"name":"dinucleotide repeat microsatellite feature","type":"exact"},{"name":"dinucleotide repeat microsatellite locus","type":"exact"},{"name":"dinucleotide repeat microsatellite marker","type":"exact"}],"termid":"SO:0000290"}


id: GO:0060299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of sarcomere organization","termid":"GO:0060297"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"negative regulation of sarcomere organization","synonyms":[{"name":"negative regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060299"}


id: GO:0048510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process controlling the point in time during development when a vegetative meristem will change its identity to become an inflorescence or floral meristem, and/or the rate at which the change occurs.","definition_xrefs":["GOC:jid","PMID:8974397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of timing of meristematic phase transition","termid":"GO:0048506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of transition from vegetative to reproductive phase","termid":"GO:0048510"}


id: PBO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 12","termid":"PBO:0044040"}


id: PBO:0027288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_transferase_activity_during_stationary_phase","termid":"PBO:0027288"}


id: MONDO:0033373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 64","secondary_identifiers":["UMLS:C4693899","DOID:0070375","MEDGEN:1633501","OMIM:618004"],"synonyms":[{"name":"DEE64","type":"exact"},{"name":"EIEE64","type":"exact"},{"name":"RHOBTB2 syndrome","type":"exact"},{"name":"RHOBTB2-associated neurodevelopmental disorders","type":"exact"},{"name":"RHOBTB2-related disorders","type":"broad"},{"name":"developmental and epileptic encephalopathy 64","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 64","type":"exact"}],"termid":"MONDO:0033373","xrefs":{"Monarch":{"xref_id":"0033373"}}}


id: PBO:0089774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase","termid":"PBO:0089774"}


id: PBO:0033782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_site-specific_DNA_replication_termination_at_RTS1_barrier","termid":"PBO:0033782"}


id: GO:1900876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nonadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonadec-1-ene metabolic process","synonyms":[{"name":"nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900876"}


id: MONDO:0000207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotonia, infantile, with psychomotor retardation and characteristic facies (obsolete MONDO:0000207)","termid":"MONDO:0000207","xrefs":{"Monarch":{"xref_id":"0000207"}}}


id: PBO:0089212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE binding protein Sec1","termid":"PBO:0089212"}


id: PBO:0082861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm B; part of heteroheptameric complex (with Smd1p, Smd2p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm B and Sm B'","termid":"PBO:0082861"}


id: GO:0030157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine. Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pancreatic juice secretion","termid":"GO:0030157"}


id: PBO:0034812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Ekc1","termid":"PBO:0034812"}


id: GO:0034929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxypyrene + O2 + 2 H+ + 2 e- = 1-hydroxypyrene-7,8-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxypyrene 7,8-monooxygenase activity (obsolete GO:0034929)","termid":"GO:0034929"}


id: PBO:0038471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCA9 antisense RNA 1","termid":"PBO:0038471"}


id: PBO:0078716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 1-1","termid":"PBO:0078716"}


id: GO:1900624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"negatively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte aggregation","synonyms":[{"name":"down regulation of monocyte aggregation","type":"exact"},{"name":"down regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"down-regulation of monocyte aggregation","type":"exact"},{"name":"down-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"downregulation of monocyte aggregation","type":"exact"},{"name":"downregulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"inhibition of monocyte aggregation","type":"narrow"},{"name":"inhibition of mononuclear phagocyte aggregation","type":"exact"},{"name":"negative regulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900624"}


id: PATO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating in a round end, the centre of which is depressed.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blunt","termid":"PATO:0001950"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retuse","termid":"PATO:0001974"}


id: GO:1901839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of RNA polymerase I regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of RNA polymerase I regulatory region sequence-specific DNA binding (obsolete GO:1901839)","termid":"GO:1901839"}


id: GO:1903169
data:
  {"annotated_genes":["SJAG_03631","SJAG_04551","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93165,115357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[104100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion transmembrane transport.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:24125847","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium ion membrane transport","type":"exact"},{"name":"regulation of transmembrane calcium transport","type":"exact"}],"termid":"GO:1903169","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0046668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"retinal cell programmed cell death","termid":"GO:0046666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cell programmed cell death","synonyms":[{"name":"regulation of retinal programmed cell death","type":"exact"}],"termid":"GO:0046668"}


id: PBO:0077465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185A pseudogene 1","termid":"PBO:0077465"}


id: GO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that occurs during sexual reproduction in order to facilitate direct contact between the compatible mating types in organisms that undergo conjugation without cellular fusion.","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete cell morphogenesis involved in conjugation with mutual genetic exchange (obsolete GO:0000759)","synonyms":[{"name":"cellular morphogenesis involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000759"}


id: PBO:0073228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 1","termid":"PBO:0073228"}


id: PBO:0083480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL134W/LCB3","termid":"PBO:0083480"}


id: PBO:0090108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase interacting protein involved in vesicle tethering at the Golgi","termid":"PBO:0090108"}


id: PBO:0054129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1495","termid":"PBO:0054129"}


id: MONDO:0002764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, moderately differentiated, or poorly differentiated squamous cell carcinoma that arises from the male or female urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"carcinoma of urethra","termid":"MONDO:0021327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urethra squamous cell carcinoma","secondary_identifiers":["DOID:3750","NCIT:C6165","UMLS:C1336890","MEDGEN:234975","ONCOTREE:USCC"],"synonyms":[{"name":"USCC","type":"related"},{"name":"epidermoid carcinoma of the urethra","type":"exact"},{"name":"epidermoid carcinoma of urethra","type":"exact"},{"name":"squamous cell carcinoma of the urethra","type":"exact"},{"name":"squamous cell carcinoma of urethra","type":"exact"},{"name":"urethra epidermoid carcinoma","type":"exact"},{"name":"urethra squamous cell carcinoma","type":"exact"},{"name":"urethral epidermoid carcinoma","type":"exact"},{"name":"urethral squamous cell cancer","type":"exact"},{"name":"urethral squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002764","xrefs":{"Monarch":{"xref_id":"0002764"}}}


id: PBO:0044749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 28","termid":"PBO:0044749"}


id: PBO:0113337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable but shows increased loss of mitochondrial genome and synthetic interaction with prohibitin (phb1); contains an intron; SWAT-GFP and mCherry fusion proteins localize to the mitochondria; localizes to the peroxisome in glucose; YER093C-A has a paralog, YBL059W, that arose from the whole genome duplication","termid":"PBO:0113337"}


id: PBO:0041225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf21 divergent transcript","termid":"PBO:0041225"}


id: PBO:0117041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASB6 antisense RNA 1","termid":"PBO:0117041"}


id: PBO:0064111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKD1L1 antisense RNA 1","termid":"PBO:0064111"}


id: PBO:0034468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gene_conversion_during_vegetative_growth","termid":"PBO:0034468"}


id: PBO:0041840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 20","termid":"PBO:0041840"}


id: _global:axis_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axis_of","secondary_identifiers":["GOREL:0001000"],"termid":"_global:axis_of"}


id: PBO:0036111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_during_vegetative_growth","termid":"PBO:0036111"}


id: SO:0000667
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of one or more nucleotides added between two adjacent nucleotides in the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion","secondary_identifiers":["loinc:LA6687-3","SO:1000034"],"synonyms":[{"name":"insertion","type":"exact"},{"name":"nucleotide insertion","type":"exact"},{"name":"nucleotide_insertion","type":"exact"}],"termid":"SO:0000667"}


id: PBO:0029157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_level_in_spore","termid":"PBO:0029157"}


id: GO:0000714
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA is rejected. The Watson-Crick base pairing in the original duplex is restored. The rejected 3' single-strand DNA molecule reanneals with its original complement to reform two intact duplex molecules. This occurs during meiosis.","definition_xrefs":["GOC:elh","PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand displacement","termid":"GO:0000732"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic strand displacement","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic D-loop dissociation","type":"related"},{"name":"meiotic D-loop processing","type":"related"},{"name":"meiotic displacement loop dissociation","type":"related"},{"name":"meiotic displacement loop processing","type":"related"}],"termid":"GO:0000714","terms_by_termid":{"GO:1902346":null}}


id: PBO:0047555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 12","termid":"PBO:0047555"}


id: GO:0000709
data:
  {"annotated_genes":["SJAG_03751","SJAG_01044","SJAG_03221","SJAG_00623","SJAG_02708","SJAG_04950","SJAG_02267","SJAG_01708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64377,80704,90431,98865,103482,109636,112291,119107],"is_not":false,"summary":null,"term":"GO:0000709"}]},"cv_name":"biological_process","definition":"The conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination. These joint molecules contain Holliday junctions on either side of heteroduplex DNA.","definition_xrefs":["GOC:elh","PMID:8521495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0007049","GO:0140013","GO:0006259"],"is_obsolete":false,"name":"meiotic joint molecule formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000709","terms_by_termid":{"GO:0000709":null}}


id: GO:0007340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The discharge, by sperm, of a single, anterior secretory granule following the sperm's attachment to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents into the zona pellucida.","definition_xrefs":["PMID:3886029","PMID:21042299","PMID:11175768","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acrosome reaction","secondary_identifiers":["Wikipedia:Acrosome_reaction","Reactome:R-HSA-1300645"],"termid":"GO:0007340"}


id: GO:0102073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: OPC8-3-hydroxyacyl-CoA = OPC8-trans-2-enoyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.17","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete OPC8-trans-2-enoyl-CoA hydratase activity (obsolete GO:0102073)","termid":"GO:0102073"}


id: GO:0015856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cytosine, 4-amino-2-hydroxypyrimidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cytosine transport","synonyms":[{"name":"cytosine transmembrane transport","type":"exact"}],"termid":"GO:0015856"}


id: GO:0106346
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120048"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an snRNA molecule.","definition_xrefs":["PMID:27573892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"snRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106346","terms_by_termid":{"GO:0120048":null}}


id: GO:0060374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a mast cell. A mast cell is a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell differentiation","termid":"GO:0060374"}


id: MONDO:0016434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of dermis elastic tissue disorder that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"gene_count":0,"genotype_count":0,"name":"obsolete acquired dermis elastic tissue disorder (obsolete MONDO:0016434)","secondary_identifiers":["Orphanet:228218"],"synonyms":[{"name":"acquired dermis elastic tissue disorder","type":"exact"}],"termid":"MONDO:0016434","xrefs":{"Monarch":{"xref_id":"0016434"}}}


id: GO:0005863
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament","termid":"GO:0032982"},{"relation_name":"is_a","term_name":"myofilament","termid":"GO:0036379"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"striated muscle myosin thick filament","termid":"GO:0005863"}


id: GO:0019250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12) in the presence of oxygen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobalamin biosynthetic process","termid":"GO:0009236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0033013","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"aerobic cobalamin biosynthetic process","secondary_identifiers":["MetaCyc:P381-PWY"],"synonyms":[{"name":"aerobic cobalamin anabolism","type":"exact"},{"name":"aerobic cobalamin biosynthesis","type":"exact"},{"name":"aerobic cobalamin formation","type":"exact"},{"name":"aerobic cobalamin synthesis","type":"exact"},{"name":"aerobic vitamin B12 biosynthesis","type":"exact"},{"name":"aerobic vitamin B12 biosynthetic process","type":"exact"},{"name":"cobalamin biosynthesis, aerobic","type":"exact"},{"name":"cobalamin biosynthetic process, aerobic","type":"exact"},{"name":"vitamin B12 biosynthesis, aerobic","type":"exact"},{"name":"vitamin B12 biosynthetic process, aerobic","type":"exact"}],"termid":"GO:0019250"}


id: PBO:0088673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, nutritional copper sensing Cuf1","termid":"PBO:0088673"}


id: PBO:0031017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1_phase_entry","termid":"PBO:0031017"}


id: PBO:0030672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0030672"}


id: PBO:0014294
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Choline Sensitivity homolog","termid":"PBO:0014294"}


id: PBO:0119739
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mamRNA is produced from a longer precursor transcript encompassing the downstream snoU14 gene and contains a previously unannotated intron, which itself encodes a C/D box snoRNA (snR107)","termid":"PBO:0119739"}


id: PBO:0045255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1 like 1","termid":"PBO:0045255"}


id: GO:0086095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A G protein-coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction through activation of the IKACh potassium channel. Binding of acetylcholine to a G protein-coupled acetylcholine receptor (muscarinic receptor) on the surface of the signal-receiving cell results in liberation of the G-beta/gamma complex from the alpha subunit. The G-beta/gamma complex binds directly to the inward-rectifying potassium channel IKACh. Once the ion channel is activated, potassium ions (K+) flow out of the cell and cause it to hyperpolarize. In its hyperpolarized state, action potentials cannot be fired as quickly as possible, which slows the heart rate.","definition_xrefs":["Wikipedia:G_protein-gated_ion_channel","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of IKACh channel activity by G protein-coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate (obsolete GO:0086095)","synonyms":[{"name":"Gbeta/gamma-coupled muscarinic receptor signaling pathway involved in negative regulation of heart rate","type":"related"},{"name":"cardiac muscarinic receptor signaling via Gbeta/gamma","type":"related"},{"name":"muscarinic receptor signaling pathway involved in activation of IKACH","type":"exact"},{"name":"muscarinic receptor signaling pathway involved in ion channel activation","type":"broad"},{"name":"positive regulation of IKACh channel activity by G-protein coupled acetylcholine receptor signaling","type":"exact"}],"termid":"GO:0086095"}


id: MONDO:0008512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndactyly type 1 (SD1), also named zygodactyly in the past, is a distal limb malformation characterized by complete or partial webbing between the 3th and 4th fingers and/or the 2nd and 3rd toes.","definition_xrefs":["Orphanet:93402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 2","termid":"MONDO:0016953"},{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly type 1","secondary_identifiers":["UMLS:C1861380","DOID:0111816","OMIM:185900","MEDGEN:348343","icd11.foundation:1841508645","GARD:5081","SCTID:715723008"],"synonyms":[{"name":"SDTY1","type":"related"},{"name":"Sd1","type":"related"},{"name":"Zygodactyly","type":"related"},{"name":"chromosome 2q35 DUPLICATION syndrome","type":"related"},{"name":"craniosynostosis, Philadelphia type","type":"related"},{"name":"syndactyly, type 1","type":"related"},{"name":"syndactyly, type 1, with or without craniosynostosis","type":"exact"}],"termid":"MONDO:0008512","xrefs":{"Monarch":{"xref_id":"0008512"}}}


id: MONDO:0021118
data:
  {"annotated_genes":["SJAG_01082","SJAG_04699","SJAG_03453","SJAG_02426","SJAG_02748","SJAG_03920","SJAG_00980","SJAG_04206","SJAG_02231","SJAG_01837","SJAG_04394","SJAG_02187","SJAG_01620","SJAG_02226","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88399,88404,88397,88398,88403,88400,88402,88401,89279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[88733,88734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"},{"annotations":[88289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[87106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87569,87568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm involving the small or large intestine.","definition_xrefs":["NCIT:C3141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_03920":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:4610","SCTID:126769007","UMLS:C0021841","MEDGEN:43932","ONCOTREE:BOWEL"],"synonyms":[{"name":"bowel neoplasm","type":"related"},{"name":"intestinal benign neoplasm","type":"related"},{"name":"intestinal neoplasm","type":"exact"},{"name":"intestinal neoplasms","type":"exact"},{"name":"intestinal tumor","type":"exact"},{"name":"intestinal tumors","type":"exact"},{"name":"intestinal tumour","type":"exact"},{"name":"intestinal tumours","type":"exact"},{"name":"intestine growth","type":"exact"},{"name":"intestine neoplasm","type":"exact"},{"name":"intestine neoplasm (disease)","type":"exact"},{"name":"intestine tumor","type":"exact"},{"name":"intestine tumour","type":"exact"},{"name":"neoplasm of intestinal tract","type":"exact"},{"name":"neoplasm of intestine","type":"exact"},{"name":"neoplasm of intestines","type":"exact"},{"name":"neoplasm of the intestines","type":"exact"},{"name":"tumor of intestine","type":"exact"},{"name":"tumor of intestines","type":"exact"},{"name":"tumor of the intestines","type":"exact"},{"name":"tumour of intestine","type":"exact"},{"name":"tumour of intestines","type":"exact"},{"name":"tumour of the intestines","type":"exact"}],"termid":"MONDO:0021118","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0011719":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0021118"}}}


id: PBO:0076405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 3","termid":"PBO:0076405"}


id: PBO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CDRE 5'-AGCCTC-3'","termid":"PBO:0000592"}


id: FYPO:0002593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation occurs to a lower extent than normal. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced histone phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002593"}


id: PBO:0047183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 201 member A","termid":"PBO:0047183"}


id: FYPO:0001455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to water deprivation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"},{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000298","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular response to water deprivation","synonyms":[{"name":"normal cellular response to dehydration","type":"exact"},{"name":"normal cellular response to water deprivation during mitotic cell cycle","type":"related"},{"name":"normal cellular response to water deprivation during vegetative growth","type":"exact"}],"termid":"FYPO:0001455"}


id: MONDO:0005101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease involving the mucosal surface of the large intestine and rectum. It may present with an acute or slow onset and follows an intermittent or continuous course. Signs and symptoms include abdominal pain, diarrhea, fever, weight loss, and intestinal hemorrhage.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"ulcerative colitis","secondary_identifiers":["ICD9:556.8","NANDO:1200449","ICD10CM:K51","UMLS:C0009324","icd11.foundation:784669405","NANDO:2200920","MEDGEN:3532","Orphanet:771","HP:0100279","ICD9:556.5","MESH:D003093","SCTID:64766004","ICD10WHO:K51","EFO:0000729","NCIT:C2952","ICD9:556","ICD9:556.9","DOID:8577"],"synonyms":[{"name":"colitis ulcerative","type":"exact"},{"name":"left-sided ulcerative colitis","type":"narrow"},{"name":"ulcerative colitis","type":"exact"},{"name":"ulcerative colitis (disease)","type":"exact"},{"name":"ulcerative proctosigmoiditis","type":"related"}],"termid":"MONDO:0005101","xrefs":{"Monarch":{"xref_id":"0005101"}}}


id: PBO:0085948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0085948"}


id: PBO:0084903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial tryptophanyl-tRNA synthetase","termid":"PBO:0084903"}


id: GO:0008397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a steroid + reduced [NADPH--hemoprotein reductase] + O2 = a 12-alpha-hydroxysteroid + oxidized [NADPH--hemoprotein reductase]- H2O +H+.","definition_xrefs":["EC:1.14.14.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sterol 12-alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-193845","RHEA:46752","Reactome:R-HSA-192157","Reactome:R-HSA-193709"],"synonyms":[{"name":"cytochrome P450 CYP8B1","type":"narrow"}],"termid":"GO:0008397"}


id: MONDO:0035437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic autoinflammatory syndrome with immune deficiency characterized by a combination of autoinflammation, immunodeficiency, and neutrophil dysfunction, as well as mild bleeding diathesis. Patients present recurrent attacks of abdominal pain, high fever, and systemic inflammation lasting four to five days and occurring every few weeks. Attacks may be accompanied by nailbed, tongue, submandibular, and gluteal abscesses, intra-abdominal granulomas, pyoderma gangrenosum, and buccal ulcerations. Frequent episodes of purulent paronychia, superficial skin and mucosal infections, and purulent upper respiratory tract infections have also been reported.","definition_xrefs":["Orphanet:566067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEBPE-associated autoinflammation-immunodeficiency-neutrophil dysfunction syndrome","secondary_identifiers":["UMLS:C5568564","GARD:22273","ICD10CM:D89.8","MEDGEN:1799987"],"synonyms":[{"name":"CAIN","type":"exact"}],"termid":"MONDO:0035437","xrefs":{"Monarch":{"xref_id":"0035437"}}}


id: PBO:0045406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 8","termid":"PBO:0045406"}


id: PBO:0108556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) H3-K9 specific complex subunit Clr6","termid":"PBO:0108556"}


id: GO:0008345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a larval (immature) organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"larval behavior","termid":"GO:0030537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval locomotory behavior","synonyms":[{"name":"larval locomotory behaviour","type":"exact"}],"termid":"GO:0008345"}


id: MONDO:1012420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachygnathia, cardiomegaly and renal hypoplasia syndrome, non-human animal","termid":"MONDO:1011961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachygnathia, cardiomegaly and renal hypoplasia syndrome, sheep","secondary_identifiers":["OMIA:001595-9940"],"termid":"MONDO:1012420","xrefs":{"Monarch":{"xref_id":"1012420"}}}


id: PR:000050549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Ser-3, Ser-24, Ser-31, Thr-55, Thr-64, Ser-67, Ser-97, Ser-136, and Thr-214 of the amino acid sequence represented by UniProtKB:O74398. Example: UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Thr-55/Thr-64/Ser-67/Ser-97/Ser-136/Thr-214, PR:000026291.","definition_xrefs":["PMID:34133210","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","termid":"PR:000050547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pxl1/UnPhos:(S3,S24,S31,T55,T64,S67,S97,S136,T214)","pombase_gene_id":"SPBC4F6.12","synonyms":[{"name":"PomBase_original_PRO_term_name: LIM domain-containing protein C4F6.12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-pxl1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Thr-55/Thr-64/Ser-67/Ser-97/Ser-136/Thr-214, PR:000026291","type":"narrow"},{"name":"pxl1/UnPhos:(S3,S24,S31,T55,T64,S67,S97,S136,T214)","type":"exact"}],"termid":"PR:000050549"}


id: PBO:0046932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM47E-STBD1 readthrough","termid":"PBO:0046932"}


id: PBO:0049627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 30","termid":"PBO:0049627"}


id: PBO:0046007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 2","termid":"PBO:0046007"}


id: GO:0043620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from a DNA template as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:jl","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-templated transcription in response to stress (obsolete GO:0043620)","synonyms":[{"name":"regulation of DNA-dependent transcription in response to stress","type":"exact"}],"termid":"GO:0043620"}


id: PBO:0036304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg11","termid":"PBO:0036304"}


id: FYPO:0002841
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abolished protein localization to chromosome during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abolished protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome during mitotic cell cycle","type":"related"},{"name":"protein localization to chromosome abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002841","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: MONDO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammation of the mucous membrane lining the nose, usually associated with nasal discharge.","definition_xrefs":["NCIT:C34986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity disorder","termid":"MONDO:0002232"},{"relation_name":"is_a","term_name":"mucositis","termid":"MONDO:0020579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhinitis","secondary_identifiers":["SCTID:70076002","UMLS:C0035455","MESH:D012220","DOID:4483","ICD10CM:J30","MEDGEN:19782","EFO:0008521"],"synonyms":[{"name":"inflammation of nasal cavity mucosa","type":"exact"},{"name":"nasal cavity mucosa inflammation","type":"exact"},{"name":"runny nose","type":"related"}],"termid":"MONDO:0003014","xrefs":{"Monarch":{"xref_id":"0003014"}}}


id: GO:0036007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A body present in the cytoplasm of some dinoflagellates, which is the source of bioluminescence; emits light on acidification in the presence of oxygen.","definition_xrefs":["PMID:4501583","PMID:5642469","GOC:pr","GOC:mag"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"scintillon","termid":"GO:0036007"}


id: PBO:0089359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity implicated in DNA repair","termid":"PBO:0089359"}


id: GO:0035857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of an eosinophil cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:BHF","GOC:vk","CL:0000771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"eosinophil fate commitment","termid":"GO:0035854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil fate specification","synonyms":[{"name":"eosinophil cell fate specification","type":"exact"}],"termid":"GO:0035857"}


id: MONDO:0002569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal distention of the stomach due to accumulation of gastric contents that may reach 10 to 15 liters. Gastric dilatation may be the result of gastric outlet obstruction; ileus; gastroparesis; or denervation.","definition_xrefs":["MESH:D013271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric dilatation","secondary_identifiers":["MEDGEN:11602","DOID:3229","UMLS:C0038353"],"synonyms":[{"name":"stomach dilatation","type":"exact"}],"termid":"MONDO:0002569","xrefs":{"Monarch":{"xref_id":"0002569"}}}


id: FYPO:0002995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of DNA replication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of DNA replication","synonyms":[{"name":"normal regulation of DNA replication during mitotic cell cycle","type":"exact"},{"name":"normal regulation of DNA replication during vegetative growth","type":"exact"},{"name":"normal regulation of nuclear cell cycle DNA replication","type":"exact"}],"termid":"FYPO:0002995"}


id: PBO:0068991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 235, pseudogene","termid":"PBO:0068991"}


id: PBO:0089632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm2","termid":"PBO:0089632"}


id: MONDO:0011700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 19p13.","definition_xrefs":["PMID:10777714","DOID:0110907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 6","secondary_identifiers":["OMIM:606674","MEDGEN:376191","UMLS:C1847692","MESH:C564681"],"synonyms":[{"name":"IBD6","type":"exact"},{"name":"inflammatory bowel disease 6","type":"exact"},{"name":"inflammatory bowel disease type 6","type":"exact"}],"termid":"MONDO:0011700","xrefs":{"Monarch":{"xref_id":"0011700"}}}


id: PBO:0054433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1829","termid":"PBO:0054433"}


id: SO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide_region that codes for a protease cleavage site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"protease_site","synonyms":[{"name":"protease site","type":"exact"}],"termid":"SO:0001956"}


id: PR:P25457
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11524:SF5","OMA:SCHPO01432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.07","secondary_identifiers":["UniProtKB:P25457"],"synonyms":[{"name":"Spom972h-RPL7","type":"exact"}],"termid":"PR:P25457"}


id: FYPO:0001140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of leucine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal leucine import","termid":"FYPO:0001139"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased leucine import","synonyms":[{"name":"decreased L-leucine import","type":"exact"},{"name":"decreased L-leucine import across plasma membrane","type":"exact"},{"name":"decreased leucine import during mitotic cell cycle","type":"related"},{"name":"decreased leucine import during vegetative growth","type":"exact"},{"name":"decreased leucine import into cell","type":"exact"},{"name":"decreased leucine uptake","type":"exact"},{"name":"reduced leucine import","type":"exact"}],"termid":"FYPO:0001140"}


id: PBO:0005575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf15","termid":"PBO:0005575"}


id: FYPO:0005301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell cycle-regulated mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Cell cycle-regulated mRNAs are transcribed from genes whose level of transcription varies depending on cell cycle phase.","definition_xrefs":["PomBase:mah","PMID:26697368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased level of cell cycle regulated gene mRNA during vegetative growth","synonyms":[{"name":"increased cell cycle regulated gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of cell cycle regulated gene RNA during vegetative growth","type":"exact"},{"name":"increased level of cell cycle regulated gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of cell cycle regulated gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of cell cycle-regulated gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005301"}


id: MONDO:0019333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia, familial, 1","termid":"MONDO:0009734"},{"relation_name":"is_a","term_name":"diazoxide-resistant diffuse hyperinsulinism","termid":"MONDO:0015625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive hyperinsulinism due to SUR1 deficiency","secondary_identifiers":["GARD:16726","Orphanet:79643","UMLS:C5191077","MEDGEN:1683144"],"synonyms":[{"name":"autosomal recessive hyperinsulinemic hypoglycemia due to SUR1 deficiency","type":"exact"}],"termid":"MONDO:0019333","xrefs":{"Monarch":{"xref_id":"0019333"}}}


id: PBO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan","termid":"PBO:0000076"}


id: GO:0009716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"flavonoid phytoalexin metabolic process","termid":"GO:0046285"},{"relation_name":"is_a","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"flavonoid phytoalexin biosynthetic process","synonyms":[{"name":"flavonoid phytoalexin anabolism","type":"exact"},{"name":"flavonoid phytoalexin biosynthesis","type":"exact"},{"name":"flavonoid phytoalexin formation","type":"exact"},{"name":"flavonoid phytoalexin synthesis","type":"exact"}],"termid":"GO:0009716"}


id: GO:1902362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a melanocyte, the main structural component of the epidermis.","definition_xrefs":["PMID:20530876","GOC:ic","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanocyte apoptotic process","synonyms":[{"name":"melanocyte apoptosis","type":"narrow"},{"name":"melanophore apoptosis","type":"narrow"},{"name":"melanophore apoptotic process","type":"narrow"}],"termid":"GO:1902362"}


id: GO:0008118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP-N-acetyl-beta-neuraminate = an N-acetyl-alpha-neuraminyl-(2->3)-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP + H+.","definition_xrefs":["RHEA:52316","PMID:10206952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase activity","secondary_identifiers":["MetaCyc:2.4.99.6-RXN","EC:2.4.3.6"],"synonyms":[{"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase","type":"exact"},{"name":"alpha2->3 sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-beta-galactosyl(1->4)acetylglucosaminide alpha2->3-sialyltransferase activity","type":"related"},{"name":"neolactotetraosylceramide alpha-2,3-sialyltransferase activity","type":"narrow"}],"termid":"GO:0008118"}


id: PBO:0059707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 15","termid":"PBO:0059707"}


id: PBO:0040671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 29","termid":"PBO:0040671"}


id: GO:0048307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + NH4+ + 6 oxidized [2Fe-2S]-[ferredoxin] = 8 H+ + nitrite + 6 reduced [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:18041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor","termid":"GO:0016664"},{"relation_name":"is_a","term_name":"nitrite reductase activity","termid":"GO:0098809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ferredoxin-nitrite reductase activity","secondary_identifiers":["MetaCyc:FERREDOXIN--NITRITE-REDUCTASE-RXN","EC:1.7.7.1"],"synonyms":[{"name":"ammonia:ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0048307"}


id: GO:0098652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An antiparallel dimer of two collagen VII trimers, one end of which is embedded in the lamina densa while the other end attaches to banded collagen fibrils in the dermis.","definition_xrefs":["PMID:19693541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen anchoring fibril","termid":"GO:0098648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen type VII anchoring fibril","termid":"GO:0098652"}


id: PBO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited protein folding defects","termid":"PBO:0001332"}


id: GO:0070598
data:
  {"annotated_genes":["SJAG_01028","SJAG_00610","SJAG_04236","SJAG_03057","SJAG_04184","SJAG_02278","SJAG_04666","SJAG_00424","SJAG_02916"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73309,80651,75416,72524,75244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[91386,94374,96891,104802],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan biosynthetic process","termid":"GO:0070596"},{"relation_name":"is_a","term_name":"cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070597"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell wall (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall 1,3-alpha-glucan anabolism","type":"exact"},{"name":"cell wall 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"cell wall 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"cell wall 1,3-alpha-glucan formation","type":"exact"},{"name":"cell wall 1,3-alpha-glucan synthesis","type":"exact"},{"name":"cell wall alpha-1,3-glucan anabolism","type":"exact"},{"name":"cell wall alpha-1,3-glucan biosynthesis","type":"exact"},{"name":"cell wall alpha-1,3-glucan biosynthetic process","type":"exact"},{"name":"cell wall alpha-1,3-glucan formation","type":"exact"},{"name":"cell wall alpha-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0070598","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: MONDO:1010097
data:
  {"annotated_genes":["SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044326"},{"annotations":[88683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013468"}]},"cv_name":"mondo","definition":"Any neurological disorder in which the cause of the disease is a mutation in the DHDDS gene.","definition_xrefs":["PMID:34034154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02163":null},"genotype_count":0,"is_obsolete":false,"name":"DHDDS-related syndrome","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"progressive myoclonus ataxia","type":"broad"}],"termid":"MONDO:1010097","terms_by_termid":{"MONDO:0013468":null,"MONDO:0044326":null},"xrefs":{"Monarch":{"xref_id":"1010097"}}}


id: MONDO:1011198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypophosphatemic rickets in rabbits due to ablation of the DMP1 gene created using CRISPR/Cas9.","definition_xrefs":["OMIA:001542-9986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemic rickets, DMP1-related, rabbit","synonyms":[{"name":"hypophosphatemic rickets, autosomal recessive, 1, rabbit","type":"related"}],"termid":"MONDO:1011198","xrefs":{"Monarch":{"xref_id":"1011198"}}}


id: MONDO:0015536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Papular xanthoma is a form of non-Langerhans cell histiocytosis characterized by cutaneous presentation of solitary or disseminated yellow to orange-brown papular or papulonodular, noncoalescent, asymptomatic skin lesions located predominantly on the head, neck, trunk and extremities (rarely on oral mucosa), in the presence of normolipidemia. Microscopically, the lesions consist of monomorphous infiltrate of xanthomatized macrophages and numerous Touton giant cells, with scant or absent inflammatory infiltrate. It is usually not associated with systemic disease.","definition_xrefs":["Orphanet:158008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"papular xanthoma","secondary_identifiers":["UMLS:C4707373","SCTID:765221009","GARD:20021","MEDGEN:1636485","icd11.foundation:1137782407"],"termid":"MONDO:0015536","xrefs":{"Monarch":{"xref_id":"0015536"}}}


id: PBO:0089090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1","termid":"PBO:0089090"}


id: PBO:0116951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion lysine methyltransferase/HTPAP deaminase","termid":"PBO:0116951"}


id: GO:2000293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of defecation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of defecation","termid":"GO:2000292"},{"relation_name":"negatively_regulates","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of defecation","termid":"GO:2000293"}


id: MONDO:0018421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 69","secondary_identifiers":["GARD:21699","MEDGEN:1679277","Orphanet:401830","UMLS:C5190577"],"synonyms":[{"name":"SPG69","type":"exact"}],"termid":"MONDO:0018421","xrefs":{"Monarch":{"xref_id":"0018421"}}}


id: MONDO:0975754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"borderline vascular tumor","termid":"MONDO:0971116"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudomyogenic hemangioendothelioma","secondary_identifiers":["Orphanet:673556","UMLS:C3840252","MEDGEN:826097"],"termid":"MONDO:0975754","xrefs":{"Monarch":{"xref_id":"0975754"}}}


id: GO:0006209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"cytosine metabolic process","termid":"GO:0019858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cytosine catabolic process","synonyms":[{"name":"cytosine breakdown","type":"exact"},{"name":"cytosine catabolism","type":"exact"},{"name":"cytosine degradation","type":"exact"}],"termid":"GO:0006209"}


id: PBO:0071811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 6","termid":"PBO:0071811"}


id: PBO:0083452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CTI6/YPL181W","termid":"PBO:0083452"}


id: MONDO:1012028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bleeding disorder, non-human animal","termid":"MONDO:1011685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, domestic cat","secondary_identifiers":["OMIA:000113-9685"],"termid":"MONDO:1012028","xrefs":{"Monarch":{"xref_id":"1012028"}}}


id: PATO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000968 albino value (obsolete PATO:0000968)","termid":"PATO:0000968"}


id: GO:0060305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the diameter of a cell, the length of a line segment that crosses through the center of a circular section through a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell size","termid":"GO:0008361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell diameter","synonyms":[{"name":"regulation of cell width","type":"broad"}],"termid":"GO:0060305"}


id: FYPO:0006627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphatidylinositol level","termid":"FYPO:0001507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane","synonyms":[{"name":"normal 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate level in plasma membrane","type":"exact"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in cell membrane","type":"exact"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"normal plasma membrane PI(4,5)P2 level","type":"exact"},{"name":"normal plasma membrane phosphatidylinositol-4,5-bisphosphate level","type":"exact"}],"termid":"FYPO:0006627"}


id: MONDO:0007271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial cutaneous collagenoma is a connective tissue nevus characterized by multiple, flesh-colored asymptomatic nodules distributed symmetrically on the trunk and upper arms (mainly on the upper two-thirds of the back), manifesting around adolescence. The skin biopsy reveals an accumulation of collagen fibers with reduction in the number of elastic fibers. Cardiac anomalies may be observed. Familial cutaneous collagenoma follows an autosomal dominant mode of transmission.","definition_xrefs":["Orphanet:53296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial cutaneous collagenoma","secondary_identifiers":["SCTID:239139000","icd11.foundation:982220551","UMLS:C0406817","GARD:9799","MEDGEN:96073","OMIM:115250","MESH:C562925"],"synonyms":[{"name":"collagenoma, familial cutaneous","type":"related"}],"termid":"MONDO:0007271","xrefs":{"Monarch":{"xref_id":"0007271"}}}


id: PATO:0000607
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000607 relative angle value (obsolete PATO:0000607)","termid":"PATO:0000607"}


id: PR:O94504
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trx2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin-2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.07c","synonyms":[{"name":"Spom972h-trx2","type":"exact"},{"name":"Trx-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94504"}


id: GO:0098661
data:
  {"annotated_genes":["SJAG_03401","SJAG_01941","SJAG_01033","SJAG_03442","SJAG_00048","SJAG_00671","SJAG_01168","SJAG_02463","SJAG_01080","SJAG_04990","SJAG_01973","SJAG_01319","SJAG_01059","SJAG_04241","SJAG_00547","SJAG_00233","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91445],"is_not":false,"summary":null,"term":"GO:0098661"},{"annotations":[112954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"},{"annotations":[79111,72311,75302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"},{"annotations":[115741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"},{"annotations":[69578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[90362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[117789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[118505,111686,114724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035435"},{"annotations":[91051,108647,116511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180042"},{"annotations":[101344],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"},{"annotations":[67262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[62666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"}]},"cv_name":"biological_process","definition":"The process in which an inorganic anion is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"inorganic ion transmembrane transport","termid":"GO:0098660"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00233":null,"SJAG_00547":null,"SJAG_00671":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01080":null,"SJAG_01168":null,"SJAG_01183":null,"SJAG_01319":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null,"SJAG_03442":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"inorganic anion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"inorganic anion membrane transport","type":"exact"},{"name":"transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:0098661","terms_by_termid":{"GO:0035435":null,"GO:0098661":null,"GO:0140116":null,"GO:0140159":null,"GO:0180029":null,"GO:0180042":null,"GO:1902358":null,"GO:1902434":null,"GO:1902476":null,"GO:1990547":null,"GO:1990557":null,"GO:2000185":null}}


id: MONDO:0009518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leprosy in which the cause of the disease is a mutation in the TLR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy, susceptibility to, 3","secondary_identifiers":["UMLS:C1968668","MEDGEN:368500","OMIM:246300"],"synonyms":[{"name":"LPRS3","type":"related"},{"name":"TLR2 leprosy","type":"exact"},{"name":"leprosy caused by mutation in TLR2","type":"exact"},{"name":"leprosy, susceptibility to","type":"exact"},{"name":"leprosy, susceptibility to, 3","type":"exact"},{"name":"leprosy, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to leprosy 3","type":"related"}],"termid":"MONDO:0009518","xrefs":{"Monarch":{"xref_id":"0009518"}}}


id: PBO:0087986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; catalyzes the conversion of uridine to pseudouridine at position 31 in cytoplasmic and mitochondrial tRNAs; mutation of Asp168 to Ala abolishes enzyme activity; not essential for viability","termid":"PBO:0087986"}


id: PBO:0083340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORF YDL010W","termid":"PBO:0083340"}


id: FYPO:0002178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which cells in the population are viable, and some cells are longer than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable mixed population including long cells (obsolete FYPO:0002178)","synonyms":[{"name":"long low penetrance","type":"related"}],"termid":"FYPO:0002178"}


id: PBO:0064873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 27","termid":"PBO:0064873"}


id: PBO:0031203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cisplatin","termid":"PBO:0031203"}


id: PBO:0029215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_wall","termid":"PBO:0029215"}


id: PBO:0086323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to hydroxymethylpyrimidine phosphate kinases; member of a gene family with THI20 and THI21; not required for thiamine biosynthesis; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086323"}


id: PBO:0083367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified ORF KAP95/YLR347C","termid":"PBO:0083367"}


id: FYPO:0005682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers, occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah","GO:0007019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"},{"relation_name":"is_a","term_name":"decreased microtubule polymerization or depolymerization","termid":"FYPO:0000904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule catastrophe during vegetative growth","type":"related"},{"name":"decreased microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"decreased microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule shrinkage during vegetative growth","type":"related"},{"name":"reduced microtubule depolymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005682"}


id: MONDO:0700338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammation, panniculitis, and dermatosis syndrome","termid":"MONDO:0975955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoinflammation, panniculitis, and dermatosis syndrome, autosomal dominant","secondary_identifiers":["OMIM:621030"],"termid":"MONDO:0700338","xrefs":{"Monarch":{"xref_id":"0700338"}}}


id: MONDO:0018359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of musculoskeletal system","termid":"MONDO:0000589"},{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"},{"relation_name":"is_a","term_name":"secondary neonatal autoimmune disease","termid":"MONDO:0018356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0005336"],"is_obsolete":false,"name":"neonatal dermatomyositis","secondary_identifiers":["Orphanet:398117","GARD:21646","UMLS:C4751516","MEDGEN:1649267"],"synonyms":[{"name":"neonatal DM","type":"exact"}],"termid":"MONDO:0018359","xrefs":{"Monarch":{"xref_id":"0018359"}}}


id: GO:0150061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 3 (AMY3), a G protein-coupled receptor complex, on the surface of the target cell. The AMY3 signaling pathway can also be initiated by the amyloid-beta complex. AMY3 signaling results in increased import of calcium ions into the cytosol across plasma membrane, increased phosphorylation of ERK1/2, Act, and a PKA regulatory subunit II, as well as increased expression of cFos.","definition_xrefs":["GOC:bc","PMID:22500019","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"amylin receptor 3 signaling pathway","synonyms":[{"name":"AMY3 signaling pathway","type":"exact"}],"termid":"GO:0150061"}


id: GO:0160010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2-hydroxyisobutanoyl)-L-lysyl-[protein] = 2-hydroxy-2-methylpropanoate + L-lysyl-[protein].","definition_xrefs":["PMID:29192674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"protein de-2-hydroxyisobutyrylase activity","secondary_identifiers":["RHEA:69176"],"termid":"GO:0160010"}


id: FYPO:0005030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the leading strand during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:25664722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on leading strand","synonyms":[{"name":"increased rNMP incorporation on leading strand","type":"related"},{"name":"increased rNTP incorporation on leading strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on leading strand","type":"exact"}],"termid":"FYPO:0005030"}


id: PBO:0028865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mRNA_level_during_vegetative_growth","termid":"PBO:0028865"}


id: PBO:0064321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 3","termid":"PBO:0064321"}


id: PBO:0027843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_double-strand_break_site","termid":"PBO:0027843"}


id: PR:O59787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle subunit SRP72 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit srp72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.10","secondary_identifiers":["UniProtKB:O59787"],"synonyms":[{"name":"Spom972h-SRP72","type":"exact"},{"name":"signal recognition particle 72 kDa protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59787"}


id: PBO:0075198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 10","termid":"PBO:0075198"}


id: PBO:0110162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine-34 deaminase subunit Tad2","termid":"PBO:0110162"}


id: MONDO:0010995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease type 1 in which the cause of the disease is a mutation in the LITAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1C","secondary_identifiers":["icd11.foundation:1224517226","MESH:C537984","UMLS:C0270913","DOID:0110151","MEDGEN:75728","OMIM:601098","GARD:1247","Orphanet:101083"],"synonyms":[{"name":"CMT 1C","type":"related"},{"name":"CMT slow nerve conduction type C","type":"exact"},{"name":"CMT, slow nerve conduction type C","type":"related"},{"name":"CMT1C","type":"exact"},{"name":"Charcot Marie Tooth disease type 1C","type":"related"},{"name":"Charcot-Marie-Tooth disease type 1 caused by mutation in LITAF","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1C","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1C","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1C","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1C","type":"related"},{"name":"HMSN 1C","type":"related"},{"name":"HMSN IC","type":"exact"},{"name":"HMSN1C","type":"exact"},{"name":"LITAF Charcot-Marie-Tooth disease type 1","type":"exact"},{"name":"neuropathy hereditary motor and sensory type 1C","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type 1C","type":"related"}],"termid":"MONDO:0010995","xrefs":{"Monarch":{"xref_id":"0010995"}}}


id: GO:0000028
data:
  {"annotated_genes":["SJAG_02479","SJAG_02340","SJAG_01548","SJAG_02749","SJAG_03798","SJAG_02184","SJAG_04524","SJAG_01296","SJAG_04998","SJAG_01169","SJAG_00572","SJAG_03424","SJAG_02803","SJAG_03617","SJAG_04746","SJAG_02335"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71876,73609,75134,75281,76414,76484,76608,76636,77128,78539,78552,79129,96712,120629],"is_not":false,"summary":null,"term":"GO:0000028"},{"annotations":[74802,115064],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the small ribosomal subunit.","definition_xrefs":["PMID:30467428","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"ribosome assembly","termid":"GO:0042255"},{"relation_name":"part_of","term_name":"ribosomal small subunit biogenesis","termid":"GO:0042274"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00572":null,"SJAG_01169":null,"SJAG_01296":null,"SJAG_01548":null,"SJAG_02184":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02479":null,"SJAG_02749":null,"SJAG_02803":null,"SJAG_03424":null,"SJAG_03617":null,"SJAG_03798":null,"SJAG_04524":null,"SJAG_04746":null,"SJAG_04998":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"ribosomal small subunit assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"30S ribosomal subunit assembly","type":"narrow"},{"name":"40S ribosomal subunit assembly","type":"narrow"}],"termid":"GO:0000028","terms_by_termid":{"GO:0000028":null,"GO:0034462":null}}


id: PBO:0029601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transporter_activity","termid":"PBO:0029601"}


id: PBO:0090770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF34 family protein","termid":"PBO:0090770"}


id: MONDO:1011574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, horse","secondary_identifiers":["OMIA:000181-9796"],"termid":"MONDO:1011574","xrefs":{"Monarch":{"xref_id":"1011574"}}}


id: PR:O42917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eso1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase eso1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.11","synonyms":[{"name":"ECO1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eso1","type":"exact"},{"name":"sister chromatid cohesion protein eso1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42917"}


id: PBO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent S. cerevisiae ortholog","termid":"PBO:0000055"}


id: GO:0048259
data:
  {"annotated_genes":["SJAG_04465","SJAG_04052","SJAG_00649"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120878,113014,113661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00649":null,"SJAG_04052":null,"SJAG_04465":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of receptor-mediated endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of receptor mediated endocytosis","type":"exact"}],"termid":"GO:0048259","terms_by_termid":{"GO:2000369":null}}


id: GO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"immunoglobulin production","secondary_identifiers":["GO:0048305","GO:0002378"],"synonyms":[{"name":"antibody production","type":"exact"},{"name":"immunoglobulin biosynthetic process","type":"narrow"},{"name":"immunoglobulin secretion","type":"narrow"}],"termid":"GO:0002377"}


id: PBO:0034679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_triglyceride_level","termid":"PBO:0034679"}


id: FYPO:0005135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"},{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to linear element","synonyms":[{"name":"normal protein localisation to linear element","type":"exact"}],"termid":"FYPO:0005135"}


id: MONDO:0001531
data:
  {"annotated_genes":["SJAG_00108","SJAG_03712","SJAG_01732","SJAG_03115","SJAG_02093","SJAG_02453","SJAG_03204","SJAG_01466","SJAG_02839","SJAG_02091"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88036,88035,88037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018794"},{"annotations":[88242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009206"},{"annotations":[88040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014885"},{"annotations":[87894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[87125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012465"},{"annotations":[89226,89225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008559"},{"annotations":[87833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010518"}]},"cv_name":"mondo","definition":"A condition in which there is a deviation from or interruption of the normal coagulation properties of the blood.","definition_xrefs":["NCIT:C2902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_01466":null,"SJAG_01732":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02453":null,"SJAG_02839":null,"SJAG_03115":null,"SJAG_03204":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"blood coagulation disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:604","MESH:D001778","SCTID:64779008","UMLS:C0005779","DOID:1247","ICD9:286.9","ICD9:287.8","ICD9:286","EFO:0009314"],"synonyms":[{"name":"blood coagulation disorder","type":"exact"},{"name":"coagulation defect","type":"exact"},{"name":"coagulation disorder","type":"exact"},{"name":"coagulation disorder, blood","type":"exact"},{"name":"coagulation disorders, blood","type":"exact"},{"name":"coagulopathy","type":"exact"},{"name":"disorder, blood coagulation","type":"exact"},{"name":"disorders, blood coagulation","type":"exact"},{"name":"postpartum coagulation defect","type":"exact"},{"name":"postpartum coagulation defect with delivery","type":"exact"}],"termid":"MONDO:0001531","terms_by_termid":{"MONDO:0008559":null,"MONDO:0009206":null,"MONDO:0010518":null,"MONDO:0011997":null,"MONDO:0012465":null,"MONDO:0014885":null,"MONDO:0018794":null},"xrefs":{"Monarch":{"xref_id":"0001531"}}}


id: PBO:0077412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM147 antisense RNA 1","termid":"PBO:0077412"}


id: MONDO:0005787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the liver with species of mycobacterium, most often mycobacterium tuberculosis. It is characterized by localized small tuberculous miliary lesions or tumor-like mass (tuberculoma), and abnormalities in liver function tests.","definition_xrefs":["MESH:D014386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal tuberculosis","termid":"MONDO:0000369"},{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"},{"relation_name":"is_a","term_name":"gastrointestinal tuberculosis","termid":"MONDO:0005768"},{"relation_name":"is_a","term_name":"endocrine tuberculosis","termid":"MONDO:0006743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatic tuberculosis","secondary_identifiers":["ICD9:017.90","EFO:0007302","UMLS:C0041313","DOID:407","MEDGEN:11944","SCTID:186273003"],"synonyms":[{"name":"tuberculosis of liver","type":"exact"}],"termid":"MONDO:0005787","xrefs":{"Monarch":{"xref_id":"0005787"}}}


id: MONDO:0010947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Budd-Chiari syndrome (BCS) is caused by obstruction of hepatic venous outflow involving either the hepatic veins or the terminal segment of the inferior vena cava.","definition_xrefs":["Orphanet:131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"Budd-Chiari syndrome","secondary_identifiers":["MEDGEN:163632","ICD10CM:I82.0","SCTID:82385007","UMLS:C0856761","MESH:D006502","OMIM:600880","GARD:5968","ICD9:453.0","icd11.foundation:1300118676","MedDRA:10006537","NANDO:1200437"],"synonyms":[{"name":"BDCHS","type":"related"},{"name":"Budd-Chiari syndrome","type":"exact"},{"name":"Budd-Chiari syndrome, somatic","type":"exact"},{"name":"membranous obstruction of Inferior vena cava","type":"related"},{"name":"membranous obstruction of the inferior vena cava","type":"related"}],"termid":"MONDO:0010947","xrefs":{"Monarch":{"xref_id":"0010947"}}}


id: PBO:0091952
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SRP54","termid":"PBO:0091952"}


id: MONDO:0004885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic choroid disorder","termid":"MONDO:0001898"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"choroidal sclerosis","secondary_identifiers":["SCTID:406446000","MEDGEN:137998","DOID:980","MESH:C535358","ICD9:363.40","ICD9:363.4","UMLS:C0344297"],"synonyms":[{"name":"choroidal degenerations","type":"exact"},{"name":"neurodegenerative disease of optic choroid","type":"exact"},{"name":"optic choroid neurodegenerative disease","type":"exact"}],"termid":"MONDO:0004885","xrefs":{"Monarch":{"xref_id":"0004885"}}}


id: FYPO:0008266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphate (Pi) in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular phosphate (Pi) level","termid":"FYPO:0008266"}


id: MONDO:0001231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute orbital inflammation","termid":"MONDO:0001230"},{"relation_name":"is_a","term_name":"periostitis","termid":"MONDO:0004934"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orbital periostitis","secondary_identifiers":["DOID:11231","UMLS:C0155257","MEDGEN:509877","ICD9:376.02","SCTID:65974003"],"termid":"MONDO:0001231","xrefs":{"Monarch":{"xref_id":"0001231"}}}


id: GO:0072378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of the cascade of enzymatic reactions initiated by physical damage to the wall of a blood vessel, leading to the formation of a formation of a fibrin clot at the site of the injury. The process also includes numerous positive and negative regulatory events.","definition_xrefs":["GOC:add","GOC:pde","PMID:26018600","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}


id: MONDO:0013062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the SNTA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 12","secondary_identifiers":["UMLS:C2751830","DOID:0110653","MEDGEN:442824","OMIM:612955","GARD:15595","MESH:C567842"],"synonyms":[{"name":"LQT12","type":"exact"},{"name":"SNTA1 long QT syndrome","type":"exact"},{"name":"long QT syndrome 12","type":"exact"},{"name":"long QT syndrome caused by mutation in SNTA1","type":"exact"},{"name":"long QT syndrome type 12","type":"exact"}],"termid":"MONDO:0013062","xrefs":{"Monarch":{"xref_id":"0013062"}}}


id: FYPO:0000825
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121156,121158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[121159,121157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[121144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"increased RNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["FYPO:0000910","FYPO:0001247","FYPO:0002936"],"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation during vegetative growth","type":"related"},{"name":"RNA accumulation: increased during vegetative growth","type":"related"},{"name":"increased RNA accumulation during vegetative growth","type":"related"},{"name":"increased RNA level during mitotic cell cycle","type":"related"},{"name":"increased cellular RNA level during vegetative growth","type":"exact"},{"name":"increased cellular mRNA level during vegetative growth","type":"narrow"},{"name":"increased mRNA accumulation during vegetative growth","type":"related"},{"name":"increased mRNA level during mitotic cell cycle","type":"related"},{"name":"increased mRNA level during vegetative growth","type":"narrow"},{"name":"increased mRNA transcript level during vegetative growth","type":"narrow"},{"name":"increased messenger RNA level during vegetative growth","type":"narrow"},{"name":"increased transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0000825","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004982":null}}


id: PBO:0074181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 3","termid":"PBO:0074181"}


id: PATO:0000491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000491 sensitivity value (obsolete PATO:0000491)","termid":"PATO:0000491"}


id: GO:0031734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR9 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CCR9 chemokine receptor binding","synonyms":[{"name":"CCR9 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031734"}


id: PATO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000774 bizarre gate (obsolete PATO:0000774)","termid":"PATO:0000774"}


id: FYPO:0002049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated, has no septum, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"elongated aseptate vegetative cell","termid":"FYPO:0000950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000032","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate cells during vegetative growth","type":"exact"},{"name":"elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002049"}


id: GO:0050273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-succinylglutathione + H2O = glutathione + H+ + succinate.","definition_xrefs":["EC:3.1.2.13","RHEA:16713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"S-succinylglutathione hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00499","MetaCyc:S-SUCCINYLGLUTATHIONE-HYDROLASE-RXN"],"termid":"GO:0050273"}


id: PBO:0087075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L37A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37A has a paralog, RPL37B, that arose from the whole genome duplication","termid":"PBO:0087075"}


id: PR:O60130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.16 gene.","definition_xrefs":["UniProtKB:O60130","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein C16G5.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.16","synonyms":[{"name":"Spom972h-SPBC16G5.16","type":"exact"}],"termid":"PR:O60130"}


id: PR:000044575
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rad9 gene Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"SPAC664.07c","type":"related"},{"name":"Spom-rad9","type":"exact"}],"termid":"PR:000044575"}


id: PBO:0091923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus3","termid":"PBO:0091923"}


id: GO:0009937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gibberellic acid mediated signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of gibberellic acid mediated signaling pathway","synonyms":[{"name":"regulation of gibberellic acid mediated signalling","type":"exact"}],"termid":"GO:0009937"}


id: GO:0003347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epicardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. The epicardium is a part of the pericardium.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardial cell to mesenchymal cell transition","termid":"GO:0003347"}


id: PBO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase Idp1 (predicted)","termid":"PBO:0001945"}


id: PBO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octomeric","termid":"PBO:0002497"}


id: MONDO:1012773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cystinuria that occurs in cats due to a mutation in the SLC7A9 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystinuria, non-human animal","termid":"MONDO:1012968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinuria, SLC7A9-related, domestic cat","secondary_identifiers":["OMIA:002023-9685"],"synonyms":[{"name":"cystinuria, type B, domestic cat","type":"related"}],"termid":"MONDO:1012773","xrefs":{"Monarch":{"xref_id":"1012773"}}}


id: PBO:0029941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cone-shaped_colony_morphology","termid":"PBO:0029941"}


id: PBO:0058469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5571","termid":"PBO:0058469"}


id: PBO:0004551
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates stress related genes","termid":"PBO:0004551"}


id: PBO:0031158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tyrosine_import","termid":"PBO:0031158"}


id: PBO:0087467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a replication-pausing checkpoint complex; Tof1p-Mrc1p-Csm3p acts at the stalled replication fork to promote sister chromatid cohesion after DNA damage, facilitating gap repair of damaged DNA; interacts with the MCM helicase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087467"}


id: MONDO:0004565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the normal flow of the intestinal contents within the bowel.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal obstruction","secondary_identifiers":["ICD9:560.89","MEDGEN:43933","NCIT:C9175","SCTID:81060008","UMLS:C0021843","DOID:8437","ICD9:560.9","MESH:D007415"],"synonyms":[{"name":"bowel obstruction","type":"exact"}],"termid":"MONDO:0004565","xrefs":{"Monarch":{"xref_id":"0004565"}}}


id: PBO:0088604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1 repeat protein","termid":"PBO:0088604"}


id: PBO:0120261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSTL5 antisense RNA 1","termid":"PBO:0120261"}


id: GO:0007227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals that are initiated by the transmembrane protein Smoothened. In the presence of a Hedgehog signaling molecule, the Patched protein no longer inhibits the activity of Smoothened, and Smoothened signals via the Hedgehog signaling complex to activate downstream components of the Hedgehog signaling pathway.","definition_xrefs":["PMID:15057936"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction downstream of smoothened (obsolete GO:0007227)","termid":"GO:0007227"}


id: MONDO:0009557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal recessive inherited disorder caused by mutations in the LMNA gene. It is characterized by growth retardation, craniofacial abnormalities with mandibular hypoplasia, skeletal abnormalities with progressive osteolysis of the distal phalanges and clavicles, and mottled or patchy skin pigmentation. The affected individuals have a marked acral loss of adipose tissue with normal or increased adipose tissue in the neck and trunk.","definition_xrefs":["NCIT:C123417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mandibuloacral dysplasia","termid":"MONDO:0016584"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"mandibuloacral dysplasia with type A lipodystrophy","secondary_identifiers":["icd11.foundation:1756335062","Orphanet:90153","UMLS:C5399785","SCTID:109419009","DOID:0081128","MEDGEN:1757618","MESH:C535705","GARD:3374","OMIM:248370"],"synonyms":[{"name":"MADA","type":"related"},{"name":"MANDIBULOACRAL dysplasia with type A lipodystrophy","type":"related"},{"name":"Mandibuloacral dysplasia with type a lipodystrophy, atypical","type":"related"},{"name":"craniomandibular Dermatodysostosis","type":"related"},{"name":"lipodystrophy, type A, associated with Mandibuloacral dysplasia","type":"related"},{"name":"mandibuloacral dysplasia","type":"broad"},{"name":"mandibuloacral dysplasia with type A lipodystrophy","type":"exact"}],"termid":"MONDO:0009557","xrefs":{"Monarch":{"xref_id":"0009557"}}}


id: PBO:0075294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 33","termid":"PBO:0075294"}


id: GO:0015578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mannose from one side of a membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"mannose transmembrane transporter activity","secondary_identifiers":["GO:0015589"],"synonyms":[{"name":"mannose permease activity","type":"exact"}],"termid":"GO:0015578"}


id: FYPO:0000656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is abnormal, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding phenotype","termid":"FYPO:0000653"},{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000653","FYPO:0000707"],"is_obsolete":false,"name":"abnormal DNA binding","termid":"FYPO:0000656"}


