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Ticket Resolution Summary Owner Reporter
#28 duplicate Summary use of "PSU" qualifiers kim_rutherford val_wood
Description

There are 136 PSU qualifiers, Is it possible to extract their numbers of occurances from chado (when fully loaded) so I know how many times each qualifier is used and I can figure out which ones need mapping to annotation_extensions?

Val

#29 duplicate EMBL resubmission val_wood val_wood
Description

To pick up new features http://www.genedb.org/genedb/pombe/newgenes.jsp and gene structure changes http://www.genedb.org/genedb/pombe/coordChanges.jsp and recent Broad updates (lots)

FIRST check NCBI name problem fixed check dummy PMID fixed also fix strain of mating type contig instructions are in sequence update

AFTER report update to Uniprot pomblelist NCBI Raja pir/ ensembl/biogrid Eleanor gp2protein

#30 duplicate Sequence update, followed by EMBL update val_wood val_wood
Description
  • Hideki, gap filling ?
  • Sasaki M, Idiris A, Tada A, Kumagai H, Giga-Hama Y, Tohda H.

Yeast. 2008 Sep;25(9):673-9.PMID: 18727152 new telomeric clone

pending

http://www.sanger.ac.uk/Projects/S_pombe/sequence_updates.shtml

http://www.sanger.ac.uk/Projects/S_pombe/sequence_discrepancies.shtml

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