Custom Query (31 matches)


Show under each result:

Results (19 - 21 of 31)

1 2 3 4 5 6 7 8 9 10 11
Ticket Resolution Summary Owner Reporter
#5 duplicate check GO protein binding reciprocal IPI kim_rutherford gomidori

Check that all GO protein binding IPI have reciprocal annotations

This should be added as part of the "Chado" loading or as part of the sanity checks

#4 duplicate check ISS outliers/stale ISS somebody gomidori

There are a LARGE number of ISS annotations which are "unsupported" i.e the with column target does not have the annotation

A few may need removing but I think most probably need more granular at SGD. In some cases it is possible that the original annotation was removed from SGD (It would be great if there was some alerting for this!)

There is a Goose MySQL query to get the numbers.

Maybe this should link to a wiki page with a link to the query where we periodically check the total?

I don't really intend to do this as a task, but in general the numbers should obviously decrease.

It also might be a nice training exercise for Antonia (or us) to check a few of these and either

i) ask SGD if the annotation should be moved down


ii) find other supporting evidence


iii) remove if incorrect

#8 duplicate geens with antisense transcripts somebody val_wood

Add gene expression, antisense transcript detected to all genes with antisense transcripts

(can probably so this in Artemis)

1 2 3 4 5 6 7 8 9 10 11
Note: See TracQuery for help on using queries.