Changes between Version 736 and Version 737 of AntoniasCuratedPapers


Ignore:
Timestamp:
Dec 13, 2012, 3:28:05 PM (9 years ago)
Author:
antonialock
Comment:

--

Legend:

Unmodified
Added
Removed
Modified
  • AntoniasCuratedPapers

    v736 v737  
    199199||7898433||http://curation.pombase.org/pombe/curs/5964257cca6cfa69||
    200200||uvi15||gene expression, change in response to L-canavanine to during the above once the term is in||artemis||
    201 
    202 [[BR]]
    203 ||22017871||http://curation.pombase.org/pombe/curs/4d5512a5dc8ea4bc||
    204 Phenotypes:
    205 ||ubr1||increased protein level during cellular response to hypoxia||allele=deletion,assayed_using(sre1 precursor)||
    206 ||ubr1||increased protein level during cellular response to hypoxia||allele=deletion,assayed_using(PR:000028992)||
    207 ||ubr1||increased protein level during cellular response to oxygen||allele=deletion,assayed_using(PR:000028992)||
    208 ||rhp6||increased protein level during cellular response to hypoxia||allele=deletion,assayed_using(PR:000028992)||
    209 ||rhp6||normal protein level during cellular response to hypoxia||allele=deletion,assayed_using(sre1 precursor)||
    210 ||rhp6||increased protein level during cellular response to oxygen||allele=deletion,assayed_using(PR:000028992)||
    211 ||sre1 | ubr11|| normal protein level during cellular response to hypoxia||allele=sre1-N(recheck, cellpress down atm), allele=ubr11-delta,assayed_using(PR:000028992)||
    212 ||sre1 | ubr11|| normal protein level during cellular response to oxygen||allele=sre1-N(recheck, cellpress down atm), allele=ubr11-delta,assayed_using(PR:000028992)||
    213 ||sre1|| normal protein level during cellular response to hypoxia||allele=sre1-N(recheck, cellpress down atm),assayed_using(PR:000028992)||
    214 ||sre1 | ofd1||increased protein level during cellular response to oxygen||allele=ofd1delta, allele=sre1-N, assayed_using(PR:000028992)||
    215 ||sre1 | ofd1||increased protein level during cellular response to hypoxia||allele=ofd1delta, allele=sre1-N, assayed_using(PR:000028992)||
    216 ||ubr1 | ofd1||increased protein level during cellular response to oxygen||allele=ofd1delta, allele=ubr1delta, assayed_using(PR:000028992)||
    217 ||ubr1 | ofd1||increased protein level during cellular response to hypoxia||allele=ofd1delta, allele=ubr1delta, assayed_using(PR:000028992)||
    218 ||ubr1 | nro1||increased protein level during cellular response to oxygen||allele=nro1delta, allele=ubr1delta, assayed_using(PR:000028992)||
    219 ||ubr1 | nro1||increased protein level during cellular response to hypoxia||allele=nro1delta, allele=ubr1delta, assayed_using(PR:000028992)||
    220 ||ofd1||increased protein level during cellular response to oxygen||allele=ofd1delta, assayed_using(PomBase:SPAC222.11), NORTHERN||
    221 ||nro1||decreased RNA level during cellular response to hypoxia||allele=deleteion, assayed using(PomBase:SPAC222.11), northern||
    222 ||nro1||normal RNA level during cellular response to hypoxia||allele=deleteion, assayed using(PomBase:SPBC19C2.09), northern||
    223 ||ofd1||decreased protein binding during cellular response to hypoxia||allele=H142A, assayed_using(PomBase:SPCC4B3.07)
    224 ||ofd1||overexpressed ofd1 C terminal domain -> decreased binding of sre1 to hem13 (chip assay)||||
    225 
    226 Processes:
    227 ||||general:have requested cellular response to oxygen use TG after I get this||||
    228 
    229 ||ofd1||negative regulation of sterol regulatory element DNA binding||annotation_extension=requires_sequence_feature(Pfam:13640) | annotation_extension=happens_during(cellular response to oxygen||
    230 ||nro1||+ve reg of cellular response to hypoxia||IDA||
    231 
    232 
    233201
    234202[[BR]]
     
    260228||krp1||normal protein processing||can I add a assayed_using?||
    261229
    262 [[BR]]
    263 ||15075270||http://curation.pombase.org/pombe/curs/9a4ed1603d089abe||
    264 ||liz1||pantothenate import into cell||IGI to cerevisiae like the MF terms||
    265 ||liz1||decreased pantothenate import into cell||allele=deletion||
    266 ||liz1||increased pantothenate import into cell||wt overexpressed||
    267 ||liz1||pantothenate import into cell||IMP||
    268230
    269231[[BR]]
     
    286248
    287249[[BR]]
    288 ||20306||http://curation.pombase.org/pombe/curs/641e9af49e65dc1e/||
    289 ||apt1||requested from chebi tetrasodium pyrophosphate||replace ID in extension||
    290 
    291 [[BR]]
    292250||8346915||http://curation.pombase.org/pombe/curs/8699a16a5d40e84b||
    293251||ade2||search inbox for no need to add substrates if they are implicit in the reaction||
    294252
    295 [[BR]]
    296 ||1293882||http://curation.pombase.org/pombe/curs/514dd7a2a9dcca89||
    297 ||mae1||succinate:hydrogen symporter activity ||requested from GO||
    298 
    299 [[BR]]
    300 ||1317550||http://curation.pombase.org/pombe/curs/722b74f950617459||
    301 ||swi4|| gene conversion at mating-type locus, termination of copy-synthesis||IMP||
    302253
    303254[[BR]]