wiki:AntoniasCuratedPapers

Version 930 (modified by antonialock, 8 years ago) (diff)

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https://sourceforge.net/apps/trac/pombase/wiki/CuratorTrainingPapers

Papers needing ODA conversions
Papers with WT info or no annotations
AntoniasDoubleMutants
AntoniasRNAmodsandmutants
https://sourceforge.net/apps/trac/pombase/wiki/CuratorTrainingPapers


2900761Antonia
mat2-P...or mat2-Pc/Pi?Silenced (waiting for GeneDB to update cassette info so this can be annotated)IMP mat1-
mat3-M...or mat3-Mc/Mi?Silenced (waiting for GeneDB to update cassette info so this can be annotated)IMP mat1-
mat1-MiPhenotype: can conjugate but not undergo meiosis/sporulateallele=Mifs15(del_nt43-129)
mat1-PiPhenotype: can conjugate but not undergo meiosis/sporulateallele=Piop7(del_nt19-357)
mat1-PcPhenotype: can't conjugateallele=Pcop5(del_nt17-480)
mat1-McPhenotype: can't conjugateallele=Mcop7(del_nt19-546)
mat1-Pcsevere reduction in spore formationallele=deletion
mat1-Pcprocess: required for efficient meiosisIMP, allele=deletion
mat1-Mcprocess: required for efficient meiosisIMP, allele=deletion
mat1-Pcexpression: constitutively expressed (low levels) (rich media)IMP, allele=SP272(h+/h- meiotically competent diploid)
mat1-Pcexpression: constitutively expressed (low levels) (rich media)IMP, allele=SP720(fus1 deletion...capture as WT?)
mat1-Mcexpression: constitutively expressed (low levels) (rich media)IMP, allele=SP272(h+/h- meiotically competent diploid)
mat1-Mcexpression: constitutively expressed (low levels) (rich media)IMP, allele=SP720(fus1 deletion...capture as WT?)
mat1-Piexpression: not expressed (rich media)IMP, allele=SP272(h+/h- meiotically competent diploid)
mat1-Piexpression: not expressed (rich media)IMP, allele=SP720(fus1 deletion...capture as WT?)
mat1-Miexpression: not expressed (rich media)IMP, allele=SP272(h+/h- meiotically competent diploid)
mat1-Miexpression: not expressed (rich media)IMP, allele=SP720(fus1 deletion...capture as WT?)
All 4 are upregulated in response to nitrogen starvation. In diploid; downregulation at 6h compared to 4h, in haploid; no downregulation


2328719Antonia
map1transcription phenotype, target is not upregulated in response to nitrogen starvationallele=deletion,annotation_extension=has_regulation_target(GeneDB_Spombe:mat1-PC,(strain is H90))
mat1-Pcpositive autoregulation of transcription in response to nitrogen starvationallele=mat1-Pc-161()
map1transcription phenotype, target is not expressed in response to nitrogen starvationallele=deletion,annotation_extension=has_regulation_target(GeneDB_Spombe:mat1-Pm,(strain is H90))
mat1-Pctranscription phenotype, target is not expressed in response to nitrogen starvationallele=mat1-Pc-161(),annotation_extension=has_regulation_target(GeneDB_Spombe:mat1-Pm,(strain is H90))
mat1-Pclow constitutive expression in rich mediaallele=H90(fus1 deletion)
mat1-Pmno constitutive expression in rich mediaallele=H90(fus1 deletion)
mat1-Pmexpression in response to nitrogen starvation is dependent on the presence of CL:0002674annotation_extension=occurs_in(CL:0002675)
mat1-Pcupregulation in response to nitrogen starvation is not dependent on the presence of CL:0002674annotation_extension=occurs_in(CL:0002675)
ran1process: negative regulation of transcription from RNA polymerase II promoter during mitosis (IMP evidence code)allele=pat1-114,annotation_extension=has_regulation_target(GeneDB_Spombe:mat1-Pm, mat1-Mc and Mat1-Pc


17452352
sequence feature annotate AACCCT as a GATA transcription factor binding site, seq 5'-ATCA(C/A)AACCCTAACCCT-3'do we annotate this on the genome sequence?


18077559|Antonia
ams2 hip1slow cell growthallele=dbl mutant


20230746Antonia
ams2 remove NAS and TAS from artemis
ams2protein is unstable during G2 and M phase, partially stable during G1 and stable during S
ams2protein stability: is stable during S phase, level increased
ams2protein stability: is unstable during G2 phase, level decreased OR possibly only synthesised during S phase?
ams2protein stability: is unstable during G1/M phase, level increased OR possibly only synthesised during S phase?
ams2protein stability: is degraded by the SCF ubiquitin ligase pathway


20018864Antonia
ncs1promoter region lies in -1-130 region caact esp important
ncs1promoter for upregulation in response to calcium lies in -101-130 region
ncs1promoter for basal expression lies in -1-130 region
prz1binds caact in promoter region of ncs1


19606215Antonia
cnx1some confusing data regarding apoptosis. Notes in hardcopy paperallele=lumenal_cnx1p(aa_del488-560)
cnx1allele specifications may not be 100% correct


1563351Antonia
MatPi?expressed in response to nitrogen starvation and M factor in PcellsIDA
ste6MatPi? not expressed during N starvation and in presence of M factor in P cellsallele=deletion
ras1MatPi? not expressed during N starvation and in presence of M factor in P cellsallele=deletion
ras1MatPi? expressed during N starvation and in presence of M factor in P cells, not constitutively expressedallele=ras1val17


7975894Antonia
promoter elementfig6&7


8314086Antonia
sxa2expressed in presence of p-factor
map2expressed in H- cells


18059475Antonia
ste11annotate promoter proximal element FLEX1 and FLEXL1 to ste11, artemis


21960007
mag1structure PDB ID 3S61according to authors, does not appear to match however


1448087
pyp2552 bp 5' UTR


11470243
fas2increased accumulation of see belowallele=H201(I1276T),annotation_extension=condition(at_high_temperature)
fas2increased accumulation of see belowallele=H265(Q4Y),annotation_extension=condition(at_high_temperature)
fas2increased accumulation of see belowallele=H518(I600N),annotation_extension=condition(at_high_temperature)
fas2decreased accumulation of see belowallele=H201(I1276T),annotation_extension=condition(at_high_temperature)
fas2decreased accumulation of see belowallele=H265(Q4Y),annotation_extension=condition(at_high_temperature)
fas2decreased accumulation of see belowallele=H518(I600N),annotation_extension=condition(at_high_temperature)

For the 3 mutants above:
increased accumulation of at high temp: N-monomethyldioleoyl-PE (N-monomethyl-C18:1-C18:1-PE) N,N-dimethyl-C18:1-C18:1-PE N,N-monomethyl-C18:1-C18:1-PE N,N-dimethyl-C16:1-C18:1-PE 1-melissoyl-oleolyl-sn-glycero-3-phosphoethanolamine (C30:0-C18:1-PE) 1-melissoyl-2-oleolyl-sn-glycero-3-phosphocholine (C30:0-C18:1-PC) CHEBI:16337 CHEBI:36711


decreased accumulation of at high temp: (NOT in mutant 518) 1-oleolyl-2-caproyl-sn-glycero-3-phosphocholine (C18:1-C10:0-PC) C18:0-C10:0-PC C18:0-C8:0-PC CHEBI:18303 CHEBI:17517


1448066
-asked for a term to describe HMW complex. Link to it - GO:0090424


12905027
SPAC3H1.10MOD requested: cadmium containing modified residueresidue=C173|


19285552
gpa1can probably migrate some terms to abnormal decrease in transcription/increase, see what midori says


9191271
mfm1dbl check annotations, allele descr for phenotype annotationhas_regulation_target(PomBase:SPMTR.02))


8321236http://oliver0.sysbiol.cam.ac.uk/pombe/curs/169dc6a662075c56/gene/1
frp1abolished ferric iron reductase activity, not req yetallele=G-100(W314->opal)
waiting reply from val on paper


7565608http://oliver0.sysbiol.cam.ac.uk/pombe/curs/07cc7abfbaa6d1b0
rds1 /controlled_curation="term=gene expression, mRNA level; annotation_extension=during(cellular response to adenine starvation); qualifier=increased; evidence=ECO:0000106; db_xref=7565608; date=20120504"


1644306http://oliver0.sysbiol.cam.ac.uk/pombe/curs/1b8ed217ce984ab5
tnr3/thi1change FYPO terms so that extension is in term
tnr1increased RNA level, northern evidence, need to find what this gene is...allele=tnr1-18(unknown), annotation_extension=assayed_using(SPBC26H8.01), condition=PCO:0000014, annotation_extension=happens_during(GO:0071301)
tnr1cellular response to vitamin b1 - which gene is this?? IMP
thi2gene expression: expressed in response to thiamine starvation. repressed in response to thiamine....
/controlled_curation="term=gene expression, mRNA level; annotation_extension=during(GO:0036225); qualifier=increased; evidence=ECO:0000106; db_xref=1644306; date=20120509"
/controlled_curation="term=gene expression, mRNA level; annotation_extension=during(GO:0071301); qualifier=absent; evidence=ECO:0000106; db_xref=1644306; date=20120509"
/controlled_curation="term=gene expression, mRNA level; annotation_extension=in_response_to(CHEBI:16892); qualifier=increased; evidence=ECO:0000106; db_xref=1644306; date=20120509"
/controlled_curation="term=gene expression, mRNA level; annotation_extension=in_response_to(CHEBI:17957); qualifier=decreased; evidence=ECO:0000106; db_xref=1644306; date=20120509"


8675019http://oliver0.sysbiol.cam.ac.uk/pombe/curs/4b0970d0e5484486/
tnr1which gene is this? FYPO:0000825 northern evallele=tnr1-18(unknown), condition=PCO:0000014, annotation_extension=assayed_using(SPAC17A2.01)


2249257http://oliver0.sysbiol.cam.ac.uk/pombe/curs/40213c281e540075

/controlled_curation="term=gene expression, mRNA level; annotation_extension=during(cellular response to thiamine starvation); qualifier=increased; evidence=ECO:0000106; db_xref=2249257; date=20120510"


2878925http://curation.pombase.org/pombe/curs/462720c354cd7b67/
pma mutantnormal ATPase activity unknown, in vitro
pma mutantNormal enzyme in vitro response to Dio-9 unknown, in vitro
pma mutantNormal enzyme in vitro response to DCCD N,N'-dicyclohexylcarbodiimideunknown, in vitro
pma mutantNormal enzyme in vitro response to Miconazoleunknown, in vitro
pma mutantNormal enzyme in vitro response to DES diethylstilbestrolunknown, in vitro
pma mutantNormal enzyme in vitro response to Suloctidil unknown, in vitro
pma mutantNormal enzyme in vitro response to p-hydroxymercuribenzoate unknown, in vitro
pma mutantNormal enzyme in vitro response to protamine sulfate unknown, in vitro
pma mutantNormal enzyme in vitro response to decamethylene diguanidineunknown, in vitro
pma mutant decreased cellular pH CGA - should this be decreased medium pH?YE liquid


7898433http://curation.pombase.org/pombe/curs/5964257cca6cfa69
uvi15gene expression, change in response to L-canavanine to during the above once the term is inartemis


10867006ste11 promoter


8227198
cyr1decreased cellular cAMP level following glucose stimulussubstrate quantification, glucose/glycerol + glucose added allele=git2-7
cyr1decreased cellular cAMP level following glucose stimulussubstrate quantification, glucose/glycerol + glucose added, allele=git2-61
cgs2increased cellular cAMP level following glucose stimulussubstrate quantification, glucose/glycerol + glucose added, allele=cgs2-2
cyr1normal cellular cAMP level during glucose starvationsubstrate quantification, allele=git2-7
cyr1normal cellular cAMP level during glucose starvationsubstrate quantification, allele=git2-61
gpa2decreased cellular cAMP level during glucose starvationsubstrate quantification, allele=git8-60
gpa2decreased cellular cAMP level following glucose stimulussubstrate quantification, glucose/glycerol + glucose added, allele=git8-60
hsp90decreased cellular cAMP level following glucose stimulussubstrate quantification, glucose/glycerol + glucose added, allele=git10-201
git1decreased cellular cAMP level following glucose stimulussubstrate quantification, glucose/glycerol + glucose added, allele=git1-1
git3decreased cellular cAMP level following glucose stimulussubstrate quantification, glucose/glycerol + glucose added, allele=git3-200
git5decreased cellular cAMP level following glucose stimulussubstrate quantification, glucose/glycerol + glucose added, allele=git5-75
git7decreased cellular cAMP level following glucose stimulussubstrate quantification, glucose/glycerol + glucose added, allele=git7-235
git5increased cellular cAMP level during glucose starvationsubstrate quantification, glucose/glycerol, allele=git5-75
pka1increased cellular cAMP level during glucose starvationsubstrate quantification, glucose/glycerol, allele=git6-261


8736869http://curation.pombase.org/pombe/curs/14f96251db4cbe9b
krp1decreased or abolished for R102A, same substrate for both annotations? otherwise add in a xenobiotic condition


9418887http://oliver0.sysbiol.cam.ac.uk/pombe/curs/b6bfec3d1b81e412
krp1normal protein processingcan I add a assayed_using?


12557275http://curation.pombase.org/pombe/curs/9569cc1253e3417a
vht1change IGI annotations to transmembrane transport and transport into cell
vht1dethiobiotin bindingIGI to cerevisiae
vht1dethiobiotin import into cellIMP
vht1biotin import into cellIMP
spac1b3.15cbiotin transmembrane transportNOT, IGI to cerevisiae
spac1b3.15cdethiobiotin transmembrane transportNOT, IGI to cerevisiae
REQUEST CELLULAR RESPONSE TO BIOTIN STARVATION

/controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to biotin starvation); qualifier=increased; evidence=ECO:0000106; db_xref=PMID:12557275; date=20121107" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0072690); qualifier=present; evidence=ECO:0000106; db_xref=PMID:12557275; date=20121107"

mpr1e6d7e22d7df32487

from M - nothing wrong in this one, but I think if GO makes the name/synonym changes in SF 3584253, the MF annotations could change to GO:0000155 (now 'two-component sensor activity'; I suggested 'phosphorelay sensor kinase activity') https://sourceforge.net/tracker/?func=detail&aid=3584253&group_id=36855&atid=440764


8346915http://curation.pombase.org/pombe/curs/8699a16a5d40e84b
ade2search inbox for no need to add substrates if they are implicit in the reaction


10735857http://curation.pombase.org/pombe/curs/495144e748000da3
ght3gluconate import (change existing term)IMP

GHT6 /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071333); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0009267); qualifier=decreased; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071328); qualifier=decreased; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to D-gluconate); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to glycerol); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127"

GHT5 /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071333); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0009267); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071328); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to D-gluconate); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to glycerol); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127"

GHT2 /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071333); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0009267); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071328); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to D-gluconate); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to glycerol); qualifier=decreased; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127"

GHT1 /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071333); qualifier=absent; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0009267); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071328); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to D-gluconate); qualifier=increased; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to glycerol); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127"

GHT3 /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071333); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0009267); qualifier=increased; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071328); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to D-gluconate); qualifier=increased; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to glycerol); qualifier=increased; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127"

GHT4 /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071333); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0009267); qualifier=increased; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(GO:0071328); qualifier=present; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to D-gluconate); qualifier=increased; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127" /controlled_curation="term=gene expression, RNA level; annotation_extension=during(cellular response to glycerol); qualifier=increased; evidence=ECO:0000106; db_xref=PMID:10735857; date=20121127"=


9135083http://curation.pombase.org/pombe/curs/6ff4c9edff12167b


http://curation.pombase.org/pombe/curs/42b53662d27d7951
cuf1change nuclear protein accumulation to nuclear protein accumulation in response to copper


11729194http://curation.pombase.org/pombe/curs/0e75134c69a78468
pnk1nucleotide dephosphorylation involved in DNA repairIMP


12056900http://curation.pombase.org/pombe/curs/d23920dd53aeb0c5
pnk1nucleotide dephosphorylation involved in DNA repairIDA


11349150http://curation.pombase.org/pombe/curs/0afc32dc747285ae
pot1viable vegetative cells with circular(ized) chromosomesdeletion, gel
pot1G-rich strand telomeric DNA binding IDA


22978652http://curation.pombase.org/pombe/curs/0afc32dc747285ae
pot1G-rich strand telomeric DNA bindingIDA, inhibited_by(CHEBI:34653)


8649397http://curation.pombase.org/pombe/curs/7482369b55e6cbf6
wis1abolished protein tyrosine phosphorylation during cellular response to heatwis1-delta, western, annotation_extension=assayed_using(PomBase:SPAC24B11.06c)
wis1abolished protein tyrosine phosphorylation during cellular response to hydrogen peroxidewis1-delta, western, annotation_extension=assayed_using(PomBase:SPAC24B11.06c)
sty1elongated during cellular response to hydrogen peroxidespc1-M13, microscopy
sty1decreased RNA level during osmotic stressspc1-M13, transcript, assayed_using(gpd1)
pyp2decreased RNA level during osmotic stresspyp2-delta, transcript, assayed_using(gpd1)
sty1decreased RNA level during cellular response to heatspc1-M13, transcript, assayed_using(tps1)
sty1decreased RNA level during cellular response to heatspc1-M13, transcript, assayed_using(pyp2)
pyp2decreased protein tyrosine phosphorylation during cellular response to osmotic stresspyp2-OP, western, annotation_extension=assayed_using(PomBase:SPAC24B11.06c)
pyp2decreased protein tyrosine phosphorylation during vegetative growthpyp2-OP, western, annotation_extension=assayed_using(PomBase:SPAC24B11.06c)
pyp2normal protein tyrosine phosphorylation during cellular response to heatpyp2-delta, western, annotation_extension=assayed_using(PomBase:SPAC24B11.06c)
pyp2normal protein tyrosine phosphorylation during cellular response to osmotic stresspyp2-delta, western, annotation_extension=assayed_using(PomBase:SPAC24B11.06c)


8065367http://curation.pombase.org/pombe/curs/0b84151023ead28b
cut8inviable septated mononucleate vegetative cellcut8-563, high temp
cut8viable vegetative cell population should go to "small" colonieswt op


23145048http://curation.pombase.org/pombe/curs/9abb48d4dd839d0a
This was community curated so need to contact them once session is done)
erg5normal growth on terbinafinedeletion, cga, ypd, stand temp


23051734http://curation.pombase.org/pombe/curs/1a58c3ee1e7be06d
myo51normal actin cable morphology (straight and run from tips throughout the entire length of cell)deletion, microsopy
mal3normal actin cable morphology (straight and run from tips throughout the entire length of cell)deletion, microsopy
myo51normal actin cable localization (straight and run from tips throughout the entire length of cell)deletion, microsopy
myo52short, misoriented, actin cables (actin cables shorter than normal (ie do not span the entire length of the cell) and not parallel to the long axis of the cell)deletion, microsopy
for3normal protein localization to cell division sitedeletion, microsopy, annotation_extension=assayed_using(PomBase:SPCC1919.10c)
myo52loss of cytoplasmic foci (when a mutation in a gene product result in a loss of assayed cytoplasmic focidelta-tail, microsopy, annotation_extension=assayed_using(PomBase:SPCC1919.10c)
myo52decreased retrograde movement of formin-nucleated actin cable (cable grows from tip and inwards)deletion, microsopy
myo51decreased retrograde movement of formin-nucleated actin cable (cable grows from tip and inwards)deletion, microsopy
for3protein mislocalized to actin cortical patchdeletion, microsopy, annotation_extension=assayed_using(PomBase:myo51)

thick actin cables? curly actin cables same as misoriented?

+ve reg of retrograde transport involved in formin-nucleated actin cable assembly for3 makes actin at the cell tip, and are internalized together with the cable

http://curation.pombase.org/pombe/curs/031cfd5b4b226346
approved by community
rbp2normal chromatin silencing at silent mating-type cassetterbp2 mutant
dcr1normal chromatin silencing at silent mating-type cassettedcr1 deletion
rbp2abnormal chromatin silencing at peri-centromeric regionrbp2 mutant
dcr1abnormal chromatin silencing at peri-centromeric regiondeletion
clr4abnormal chromatin silencing at peri-centromeric regiondeletion
http://curation.pombase.org/pombe/curs/d445419299dddade
mis4decreased protein localization to pericentromeric heterochromatin during vegetative growthmis4-367, unknown, CHIP, assayed_using(rad21)
mis4decreased protein localization to telomeric heterochromatin during vegetative growthmis4-367, unknown, CHIP, assayed_using(rad21)
mis4decreased protein localization to rDNA during vegetative growthmis4-367, unknown, CHIP, assayed_using(rad21)
mis4normal mitotic sister chromatid cohesiondeletion, microscopy
swi6 | mis4decreased protein localization to chromatin during vegetative growthdeletion, unknown, microscopy, assayed_using(rad21)
eso1 | wpl1viable cell pop following spore germinationdeletion, deletion, cga
eso1 | wpl1normal minichromosome lossdeletion, deletion, loss exp


HTP gene expression data
15004206for future ref
19366728table 3 + gene expression omnibus GEOhashGSE14319for future ref


missing annotations
http://oliver0.sysbiol.cam.ac.uk/pombe/curs/219e86a87274fe5f/ro/