| | 1 | = Storage of genotypes and phenotypes in Chado = |
| | 2 | |
| | 3 | == Current (v46) storage == |
| | 4 | |
| | 5 | Phenotype cvterms are connected to allele features via the feature_cvterm table. |
| | 6 | |
| | 7 | == Future (v48?) storage == |
| | 8 | |
| | 9 | We will add a new feature for each genotype with the type "genotype" from SO. |
| | 10 | |
| | 11 | Phenotype terms will be connected to the genotypes via the feature_cvterm table. |
| | 12 | |
| | 13 | Each genotype will have one or more alleles via the feature_relationship table with the "part_of" relation. |
| | 14 | |
| | 15 | All annotation will be attached to genotypes rather than alleles. Existing alleles will have a genotype created for them and the annotation will move to that genotype. |
