Version 28 (modified by 6 years ago) (diff) | ,
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Pombelist Future Postings
PomBase?
- Help FAQ mailing list archive and other documentation
- enrichment and slimming (pombe Slim)
- getting data into PomBase?, how to curation and phenotypes and HTP sequence
- diff between FYPO and GO
- turning on tracks (track labelling) (after response from Nick, and everyne happy) (did we do this? still need to check Pacos transcriptome)
- announce protein level similarity, compara(fix)
- features
- mating type region, centromeres etc
- telomeric contig and pending sequence assembly update
- promoters (later)
- Products
- Orthologs (human/ cerevisiae ) tables and searching
- Advanced search egs /documentation for advanced query and ability to use AND operator in query history
- List upload
- searching / ability to search on SGD IDs/ site wide page search when avaiable
- enabling ESTs from all Ensembl views
- Browser issues and feedback
- Motif search
- FYPO submit data, search, browse, download
- Summary sentances (Antonia)
- disease genes, lists, searvching, cancer census, orthologs link to cosmic -> somatic mutations
- protein complex data
- protein comparison views of other schizos (and possible trouble shooting of aligment viewer), waiting until alignments are not gapped
Community curation
- launch and main tool /demo tool/ documentation
- video
Gene Names
- Gene names- naming Committee, naming procedures, naming drive
- PLEASE USE 3 alpha numberic
- refereeing, check names are in database
Annotation amnesty
- list of checks to make for your favourite gene
Misc
- How to link to and from PomBase/? external refs section/ what is there
- Data formats for HTP datasets PomBase? and public resources (+ help page), proteomics, transcriptome, phenotype, GO etc
- mailing list archive
- Which paper to use to cite fission yeast data from genedb once geneDB has disappeared
- annotation amnesty
- apologise about increasing gene page length, will fix redundancy and rearrange later
Periodic
- characterization progress (update)
- unstudied genes (update after v 33)