Changes between Version 16 and Version 17 of CurationToolMultiGenePhenotypes


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Timestamp:
Nov 10, 2014, 10:46:25 AM (6 years ago)
Author:
kmr44
Comment:

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  • CurationToolMultiGenePhenotypes

    v16 v17  
    4646  * It could probably be (a) a bit smaller and (b) not rammed up against the evidence selector (i.e. put a little bit of vertical whitespace between the evidence pulldown and the conditions box). - KMR 2014-11-10: I've made it a bit more obvious but we should chat about how it should look
    4747  * Maybe a bit more border, too, although there's a risk that would look naff. - KMR: I haven't tried a border yet
    48   * It'll also help to mention conditions in the header ("Choose evidence and conditions for annotating ...").
     48  * ~~It'll also help to mention conditions in the header ("Choose evidence and conditions for annotating ...").~~ - DONE KMR 2014-11-10
    4949 * It would be nice to have a way to edit a genotype, in case we make a mistake entering details. - MAH 2014-10-28: agreed; see ideas from today's call below
    5050  * Ooh, and maybe also a duplicate-and-edit option analogous to "duplicate annotation"? If I have two genotypes, each with six alleles of which five are the same .. (was Antonia asking for something like this on the last call?)
     
    5656 * ~~"Actions:" should be "Action" on the genotype page~~ - DONE kmr 2014-06-06
    5757 * ~~"Add a new phenotype ..." should be "Add phenotype to genotype"~~ - DONE kmr 2014-06-06
    58  * Add conditions to evidence page
     58 * ~~Add conditions to evidence page~~ - DONE KMR 2014-11-10
    5959 * ~~on publication page "Add a genotype" -> "Select a genotype"~~ - DONE kmr 2014-06-06
    6060 * ~~on the "Select a genotype" page~~ - MAH 2014-10-28: superseded by ideas from today's call; see below
     
    6767=== To-do items / bugs ===
    6868 * ~~the same annotation appears on every gene and genotype page~~ - DONE kmr 2014-10-23
    69  * In the "standard" ontology term search, when I go to select an ontology term, it only "takes" the second time I click it. Not sure how else to describe it -- click to select a term, and nothing happens; click again and it's selected. (This feels like the sort of bug that's going to be a nightmare to reproduce and track down, but I get it in both Firefox and Safari. Happy to demo if that'd help.) Term selection in popups ("Add", "Edit", etc) works as expected. (mah 2014-10-24)
    70  * Is the annotation extension box supposed to appear in the "duplicate" and "edit" popups when one is not logged in? It does at the moment ... (mah 2014-10-24)
     69 * ~~In the "standard" ontology term search, when I go to select an ontology term, it only "takes" the second time I click it.~~ - DONE, sort-of KMR 2014-11-10
     70   * ~~Not sure how else to describe it -- click to select a term, and nothing happens; click again and it's selected. (This feels like the sort of bug that's going to be a nightmare to reproduce and track down, but I get it in both Firefox and Safari. Happy to demo if that'd help.) Term selection in popups ("Add", "Edit", etc) works as expected. (mah 2014-10-24)~~
     71   * KMR: thanks, it was easy to reproduce but hard to fix.  :-)  The double click thing is fixed but now sometimes the term detail page doesn't have any detail.  Which isn't ideal.  I'm trying to fix that now.  (2014-11-10)
     72 * Is the annotation extension box supposed to appear in the "duplicate" and "edit" popups when one is not logged in? It does at the moment ... (mah 2014-10-24)  - KMR 2014-11-10: that's definitely a bug
    7173 * I gave my genotypes names, but the "Add" phenotype popup doesn't use them in the genotype pulldown; I get what I presume is the internal ID gibberish instead, and have to guess which is which. (mah 2014-10-24)
    7274 * It quite happily let me add a duplicate genotype. I think we want to disallow that -- cough up a message such as "That genotype already exists [with the name $genotype_name]", don't we? (mah 2014-10-24)
     
    9799
    98100 * On the paper summary page, replace the "Genotype list" box with a briefer summary such as "n genotypes" and link to new Genotypes page. Might need further discussion to get appearance and wording nice.
     101  * KMR 2014-11-10 - there is now a "Genotypes management" page but the formatting is very basic.
    99102
    100103 * Gene page: