Changes between Version 186 and Version 187 of CuratorMeeting


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Timestamp:
Jan 25, 2012, 5:51:15 PM (10 years ago)
Author:
val_wood
Comment:

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  • CuratorMeeting

    v186 v187  
    109109== Wednesday 25th p.m. ==
    110110
    111 == Antonia's Questions ==
    112 
    113   DONE except
    114 
    115  * Student projects
    116  
     111
    117112
    118113
     
    130125== Friday  27th p.m. ==
    131126
    132  == Help/ Documentation plan ==
    133    Update
     127 
    134128
    135129   * Phenotype input output format ...discuss https://sourceforge.net/apps/trac/pombase/wiki/PhenotypeImportExportFormats
     
    155149
    156150
    157  * Using OBO-Edit, part 2: editing & saving
    158    * make a "condition" ontology
    159 
    160  * Follow up from phenotype workflow
    161  
    162 
    163  * Are all things which can be migrated from the wiki to the curation tool?
    164  
    165  * where does conjugation begin, (is signalling from pheromone part of conjugation, or regulation of conjugation? Juan says regulation)
    166 
    167  * Q Do people need more Artemis examples?
    168 
    169  * controlled curation, still need to cover genome org/pathway/protein sequence feature/warning
    170  
    171  
    172  * Discuss annotation consistency between complexes and process (should we suggest complex/process links?)
    173  * Precomposition, where to stop. Is this too much precomposition?
    174    * https://sourceforge.net/tracker/?func=detail&atid=440764&aid=3303039&group_id=36855 (refers to eng2)
    175    * when to precompose...if there is a term genie template
    176  
    177  * GO annotation redundancy (experimental vs. non experimental)
    178 
    179  * direct binding
    180  
     151== Antonia's Questions ==
     152
     153
     154== Help/ Documentation plan ==
     155   Update
     156
     157== Data types/ Data descriptions ==
     158
    181159 * revisit expression syntax https://sourceforge.net/apps/trac/pombase/wiki/CapturingGeneExpression
    182160    * final decision so far was expression_type= detail=relevent annotation extension level=increased/decreased
     
    186164    * discuss curation tool options
    187165    * discuss  all with Kim
     166
     167== Other ==
     168
     169 * Using OBO-Edit, part 2: editing & saving
     170   * make a "condition" ontology
     171
     172 * Follow up from phenotype workflow
     173 
     174
     175 * Are all things which can be migrated from the wiki to the curation tool?
     176 
     177 * where does conjugation begin, (is signalling from pheromone part of conjugation, or regulation of conjugation? Juan says regulation)
     178
     179 * Q Do people need more Artemis examples?
     180
     181 * controlled curation, still need to cover genome org/pathway/protein sequence feature/warning
     182 
     183 
     184 * Discuss annotation consistency between complexes and process (should we suggest complex/process links?)
     185 * Precomposition, where to stop. Is this too much precomposition?
     186   * https://sourceforge.net/tracker/?func=detail&atid=440764&aid=3303039&group_id=36855 (refers to eng2)
     187   * when to precompose...if there is a term genie template
     188 
     189 * GO annotation redundancy (experimental vs. non experimental)
     190
     191 * direct binding
     192 
     193
    188194
    189195