Changes between Version 207 and Version 208 of CuratorMeeting


Ignore:
Timestamp:
Feb 6, 2012, 3:03:25 PM (10 years ago)
Author:
val_wood
Comment:

--

Legend:

Unmodified
Added
Removed
Modified
  • CuratorMeeting

    v207 v208  
    99== Priorities for next few weeks ==
    1010
    11  * GO through Antonia extensions
    12 
    13    * kim will generate file with links to sessions
    14    * Go through list
    15       * make  for separate annotions for pipe ones which are too confusing
    16       * shouldn't this be on the modification? "annotation_extension=has_substrate(GeneDBSpombe:SPCC290.04),residue=(S599|S601)",
    17 
    18       * make "residue=(S599|S601),annotation_extension=required_for(GO:0042787)", 
    19         -> residue=S599,annotation_extension=required_for(GO:0042787)| residue=S601,annotation_extension=required_for(GO:0042787)",
    20 
    21       * some places don't have annotation_extension= these will reject
    22    "allele=deletion,annotation_extension=localizes(GeneDBSpombe:SPBC106.10),happens_during(GO:0009651)",
    23 
    24       * should these be conditions?
    25  1   "allele=deletion,annotation_extension=occurs_in(CL:0002674),annotation_extension=in_absence_of(CHEBI:38579)",
    26       1       "allele=deletion,annotation_extension=occurs_in(CL:0002674),annotation_extension=in_presence_of(CHEBI:38579)",
    27 
    28        * NOT -> qualifier=NOT
    29 
    30        * allele=noname(description)
    31        * etc.
     11 * GO through Antonia extensions (kim generated file with links to sessions)
     12 
    3213 
    3314
     
    4223 * Making IC annotations (in Artemis)
    4324 * capturing or inferring recessivity/dominence (and capturing heterozygosity or homozygosity in a diploid)
     25   * Will discuss when we have real life examples
    4426 * has Antonia got any outstanding questions about relations (e-mail thread on Thursday)
    4527   * if we have the list of relations we have used we can go through this. required_for came up....