Changes between Version 338 and Version 339 of CuratorMeeting


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Timestamp:
Jan 7, 2013, 4:04:06 PM (9 years ago)
Author:
val_wood
Comment:

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  • CuratorMeeting

    v338 v339  
    104104   * several different mcm2-x alleles assayed on plasmids, with mcm2+, mcm2delta, or mcm2 allele cdc19-P1 on chromosome
    105105
    106  * Pre- vs post-composing terms
    107   * background (older comments):
    108    * We've decided to make some phenotype terms obsolete and use conditions to capture temperature, carbon source, nitrogen source, etc. Last call to review the affected terms -- are there any that we should keep after all?
    109     * normal growth at high temperature FYPO:0000674
    110     * viable at high temperature FYPO:0000282
    111     * sensitive to cold FYPO:0000080
    112     * sensitive to high osmolarity FYPO:0000081
    113     * sensitive to high temperature FYPO:0000082
    114     * slow growth at high temperature FYPO:0000247
    115     * normal cell growth on ammonia nitrogen source FYPO:0000242
    116     * normal cell growth on proline nitrogen source FYPO:0000243
    117     * slow cell growth on ammonia nitrogen source FYPO:0000249
    118     * slow cell growth on proline nitrogen source FYPO:0000250
    119     * slow cell growth on galactose carbon source FYPO:0000251
    120     * slow cell growth on glycerol/ethanol carbon source FYPO:0000442
    121     * increased cell growth rate on glucose carbon source FYPO:0000637
    122     * slow cell growth on glycerol carbon source FYPO:0000684
    123   * update 2012-03-09: I'm now thinking of keeping just heat sensitive (FYPO:82) and cold sensitive (FYPO:80) as a practical matter -- lots of community curators/users will search for them! The rest could probably still go, converted to parent + condition(s).
    124   * update 2012-06-12 (based on discussion in May): actually still thinking about this. It's a "when to pre- or post-compose terms" question, analogous to GO terms + extensions. [wiki:PrePostComposePhenotype Thoughts in progress noted here.]
     106 
    125107 
    126108 * Curation tool related, progress towards launch
     
    129111
    130112 * Making IC annotations (in Artemis)
    131 
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    134113
    135114