Changes between Version 449 and Version 450 of CuratorMeeting


Ignore:
Timestamp:
Jan 20, 2014, 2:03:27 PM (8 years ago)
Author:
val_wood
Comment:

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  • CuratorMeeting

    v449 v450  
    66= Next Items, in rough order of priority =
    77
     8 == Physical Interaction Data ==
    89
     10 * Discuss BIoGRID issue reported by Kathy yesterday, and by Henry previously
     11   * see my response waiting e-mail folder
     12
     13 * Antonia Should we add GO/protein binding terms for enzyme/substrate combinations?
     14   * Antonia should we use the BioGRID evidence code "biochemical activity" which we don't use at the moment.
     15
     16 *  Biogrid has recorded notes and phenotypes of their interaction. Looks pretty useful....can we display/convert?
     17 
     18 == Outreach ==
     19
     20 * plan roadshow dates/places
     21 * requires...
    922
    1023 * Discuss the item about capturing phenotypic observations vs. Phenotypes thread PMID:19033384
    1124
    12  * Canto text for whether a paper contains curatable gene or not
     25 == Canto ==
     26 * text, for whether a paper contains curatable gene or not
     27 * text, do you want to transfer evidence or condition
     28 * text, Add allele and evidence misleading "add more alleles using this term"
     29 * evaluating curtain tool, where do people expected to go (gene page or summary page) after annotation completion? - if I have annotated a single gene I expect to stay on that page. I f I have transferred annotations I feel as though I should go back to the summary page. Or is that odd?
    1330
    14  * canto text, do you want to transfer evidence or condition
    15  * canto text, Add allele and evidence misleading "add more alleles using this term"
     31 == PomBase gene page overhaul ==
     32 
     33 * Describe how we would like to display annotations to streamline/ hide redundancy
     34 * changes to data layout and sorting on gene page, user configuration
    1635
    17  * Gene page overhaul, discuss how we would like to display annotations to streamline/ hide redundency
    18 
    19  * Discuss things we might need to tell our users (Pombelist) includes but not limited to
     36 == Future Pombelist posts ==
    2037    * physical interaction Biogrid vs GO
    2138    * phenotypes vs. processes
    22     * did you knows
     39    * Did you know's
    2340    * Adding gene names
    2441    * preparing HTP datasets
     
    2643    etc
    2744
    28  * evaluating curtain tool, ask people where they expected to go (gene page or summary page)
    29    - if I have annotated a single gene I expect to stay on that page. I f I have transferred annotations I feel as though I should go back to the summary page. Or is that odd?
    30 
    31  * changes to ontology data layout and sorting on gene page, user configuration
     45 
    3246
    3347 * [https://sourceforge.net/p/pombase/fission-yeast-phenotype/1056/ SF 1056] abnormal contractile ring organization / uncoupled cytokinetic rings
     
    3650https://sourceforge.net/p/pombase/curation-tasks/258/
    3751
    38  * plan roadshow dates/places
     52 
    3953
    4054 * I have a note to discuss
     
    6377 * Discuss when annotations should inherit over FYPO (or alternative solutions)  https://sourceforge.net/p/pombase/curation-tasks/188/
    6478
     79  == Curation related ontology issues ==
     80
    6581 * no entry into meiosis and cell cycle phenotype https://sourceforge.net/p/pombase/fission-yeast-phenotype/709/
    6682
    67  *  Should we add GO/protein binding terms for enzyme/substrate combinations?
    68    * should we use the BioGRID evidence code "biochemical activity" which we don't use at the moment.
    69 
    70 *  Biogrid has recorded notes and phenotypes of their interaction. Looks pretty useful....can we display/convert?
     83 
    7184
    7285  == Lower priority ==