Changes between Version 358 and Version 359 of CuratorTrainingPapers


Ignore:
Timestamp:
Nov 9, 2011, 12:04:54 PM (10 years ago)
Author:
antonialock
Comment:

--

Legend:

Unmodified
Added
Removed
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  • CuratorTrainingPapers

    v358 v359  
    77[[BR]]
    88||'''PMID'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    9 ||17369611||Xhemacle/Arcangioli||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/9b5edbe6f0efcb45||
     9||21253571||-||Val||-||I have added the name, updated the species distribution, and status of clr5 (in Artemis) and mailed Pfam to create a protein family entry for the conserved N-terminal domain||
    1010||17875641||Tsutsumi/Kuno||curated ||Midori||-||http://sloth.sysbiol.cam.ac.uk/test/curs/fec781c2e8599d7a||
    1111||20622008||Khorosjutina/Gustafsson||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/77bdec1cc4f8a9e5||
    1212||20929775||Yamagishi/Watanabe||curated||Midori||pending FYPO term additions ||http://sloth.sysbiol.cam.ac.uk/test/curs/d4e73d1a93ec5860||
    13 ||20970342||Asakawa/Haraguchi||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/011e491e||
    14 ||21725325||Li/Cande||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/a3663cd38f1f2a12||
    15 ||21727087||Kuhl/Bonnefoy||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/da671cd7||
    16 ||21745468||Tang/Carr||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/64d2c81c||
    1713||2175631||Nakamura-Kubo/Nakamura||in progress || Val||-||http://sloth.sysbiol.cam.ac.uk/test/curs/4794f2ac68f1b5ba||
    1814||21813639||Ding/Forsburg||curated||Midori||all except multiple mutations||http://sloth.sysbiol.cam.ac.uk/test/curs/db0ab2817f38d5f6||
    19 ||12557273||Onishi/Fukui||uncurated||Antonia||-||http://sloth.sysbiol.cam.ac.uk/test/curs/45b4bbb5f0235d01||
    2015||12791993||Pardo/Nurse||uncurated||-||-||-||
    2116||17658285||Colmenares/Moazed||uncurated||-||-||-||
     
    2419||15857958||Bimbo/Balasubramanian||uncurated||-||-||-||
    2520||15755919||Mishra/Balasubramanian||uncurated||-||-||-||
    26 ||21091378||Andersen/Hartmann-Petersen||uncurated||Antonia||-||-||
    27 ||9191268||Davey/Christensen||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/2b3b7ef23078576||
    2821||21844224||Kiely/Winston||in progress||val||-||-||
    29 ||2792737||Fujioka/Shimoda||curated||Antonia||-||http://sloth.sysbiol.cam.ac.uk/test/curs/1cfea3361eac50c||
    30 ||2900761||Kelly/Beach||in progress||Antonia||-||http://sloth.sysbiol.cam.ac.uk/test/curs/e8c3b5736c2d1f56||
    3122||21862693||Buchheit/Burei||curated||val||contacted by author.||n/a updated in Artemis||
    3223||21386897|| Ren /Gould || in progress || val || contacted by author || ||
     
    4435||21900849||-||pil1, Biogrid query||val||-||-||
    4536||21984208||-||hnt3, DONE||val||need to add decreased DNA binding activity for F34A||-||
    46 
     37||21113731||Martin-Garcia/Valdivieso||-||val||-||
     38
     39||17137508||Andersen/Hartmann-Petersen||in progress||Antonia||||||
     40||19682301||Paul/Kawamukai||uncurated||Antonia||-||-||
     41||19584544||Oowatari/Kawamukai||uncurated||Antonia||-||-||
     42||12557273||Onishi/Fukui||uncurated||Antonia||-||http://sloth.sysbiol.cam.ac.uk/test/curs/45b4bbb5f0235d01||
     43||21091378||Andersen/Hartmann-Petersen||uncurated||Antonia||-||-||
     44||20970342||Asakawa/Haraguchi||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/011e491e||
     45||21725325||Li/Cande||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/a3663cd38f1f2a12||
     46||21727087||Kuhl/Bonnefoy||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/da671cd7||
     47||21745468||Tang/Carr||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/64d2c81c||
     48||9191268||Davey/Christensen||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/2b3b7ef23078576||
     49||2792737||Fujioka/Shimoda||curated||Antonia||-||http://sloth.sysbiol.cam.ac.uk/test/curs/1cfea3361eac50c||
     50||2900761||Kelly/Beach||in progress||Antonia||-||http://sloth.sysbiol.cam.ac.uk/test/curs/e8c3b5736c2d1f56||
     51||17369611||Xhemacle/Arcangioli||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/9b5edbe6f0efcb45||
    4752||14722091||Hamasaki-Katagiri||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/3b98520c5f6ca92f||
    4853||21869531||Gupta/Kawamukai||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/a6a51043db00c124/||
     
    5055||19606215||Guerin/Rokeach||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/f3083f2895ecf659||
    5156||18621924||Matsuo/Marcus||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/3771247b8002271||   
    52 ||19584544||Oowatari/Kawamukai||uncurated||Antonia||-||-||
    5357||7672243||Stuart/Michell||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/72c2e89987736e3||
    5458||8654750||Ladds/Davey||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/aeb3d0063f6b810||
     
    7478||8196631||Kjaerulff/Nielsen||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/4cf5f407a9f3d7f||
    7579||154790||Davey||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/631cdfca46998f0||
    76 ||21113731||Martin-Garcia/Valdivieso||-||val||-||
    7780||7975894||Aono/Shimoda||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/f3a65af2138844d6||
    7881||7813430||Davey/Matthews||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/8ccb3c8f2d46fe8||
     
    97100||21118960||Rodríguez-Sánchez/Hernández||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/f372ba194a5d127c||
    98101||2558974||Hoffman/Winston||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/d9a59af610cff3eb||
    99 
    100 
    101 
    102 [[BR]]
    103 == List of reference genome papers to be completed ==
    104 
    105 [[BR]]
    106 ||'''ste11'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    107 ||17137508||Andersen/Hartmann-Petersen||in progress||Antonia||||||
    108 ||21409593||||||||||
    109 ||21307597||||||||||
    110 ||21253571||-||Val||-||I have added the name, updated the species distribution, and status of clr5 (in Artemis) and mailed Pfam to create a protein family entry for the conserved N-terminal domain||
    111 ||20634885||||||||||
    112 ||20605454||||||||||
    113 ||19682301||Paul/Kawamukai||uncurated||Antonia||-||-||
    114 ||19417542||||||||||
    115 ||19056896||-||-||-||-||Will be curated as part of community curation||
    116 ||18422613||||||||||
    117102||18059475||Shimada/Murakami||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/5fd244fcaaf1c2fa||
    118 ||17927811||||||||||
    119 ||17289922||||||||||
    120 ||17137508||||||||||
    121 ||17046992||||||||||
    122 [[BR]]
    123 ||'''map1'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
     103||10438147||Won/Yoo ||curated||Antonia||some changes in secondary structure info not curated. Not sure if it's of interest||http://sloth.sysbiol.cam.ac.uk/test/curs/ae55f5308b1fdb21||
    124104||17248713||Meade/Gutz||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/f033fde52b328f44||
    125105||2328719||Nielsen/Egel||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/d47046a87d5d426||
    126 ||1657593||Kitamura/Shimoda||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/1065390df3fc736f||
    127 ||9003326||||||||-||-||
    128 ||12172965||||||||-||-||
    129 ||8668157||||||||TAS||-||
    130 
    131 [[BR]]
    132 ||'''fep1'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    133 ||17211681||||||||review||||
    134 ||18223116||||||||||||
    135 ||19252122||||||||||||
    136 ||19502236||||||||||||
    137 ||19915076||||||||||||
    138 ||20435771||||||||||||
    139 ||21421748||||||||||||
    140 ||21531205||||||||||||
    141 [[BR]]
    142 ||'''gaf1'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    143 ||10438147||Won/Yoo ||curated||Antonia||some changes in secondary structure info not curated. Not sure if it's of interest||http://sloth.sysbiol.cam.ac.uk/test/curs/ae55f5308b1fdb21||
    144 ||9714813||||||||||||
    145 
    146 [[BR]]
    147 ||'''ams2'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
     106||1657593||Kitamura/Shimoda||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/1065390df3fc736f||
    148107||17452352||Takayama/Takahashi||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/7d59277f413fd328||
    149108||18077559||Takayama/Takahashi||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/440ff0786082ec49||
     
    152111||20604974||Takayama/Toda||curated||Antonia||done||http://sloth.sysbiol.cam.ac.uk/test/curs/95c8e050e4eb2cd||
    153112||18158900||Dunleavy/Allshire||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/e98e46c39b053293||
    154 [[BR]]
    155 ||'''mbx1'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    156 ||18057023||||||||||||
    157 ||20032302||||||||||||
    158 ||21098635||||||||||||
    159 ||21098641||||||||||||
    160 [[BR]]
    161 ||'''matmc'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    162 ||10867006||van Beest/Clevers||done||Antonia||Incomplete - Not sure if more can be captured?||http://sloth.sysbiol.cam.ac.uk/test/curs/465139f68bfd6a53||
    163 ||10923028||Xiang/Aves||done||Antonia||Some info on mat1 region for future ref||http://sloth.sysbiol.cam.ac.uk/test/curs/70f0e3fc2a2cb939||
    164 [[BR]]
    165 ||'''prz1'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    166113||15657058||Sio/Kuno||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/3fbb994e3bfea4||
    167114||16928959||Deng/Kuno||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/9e9fe89a25f614dc||
    168115||20018864||Hamasaki-Katagiri/Ames||curated||Antonia||incomplete||http://sloth.sysbiol.cam.ac.uk/test/curs/eeccd430b89acffb||
    169 [[BR]]
    170 ||'''fhl1'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
     116||10867006||van Beest/Clevers||done||Antonia||Incomplete - Not sure if more can be captured?||http://sloth.sysbiol.cam.ac.uk/test/curs/465139f68bfd6a53||
     117||10923028||Xiang/Aves||done||Antonia||Some info on mat1 region for future ref||http://sloth.sysbiol.cam.ac.uk/test/curs/70f0e3fc2a2cb939||
     118||18362178||Nakazawa/Yanagida||curated||Antonia||remove annotations?||http://sloth.sysbiol.cam.ac.uk/test/curs/42cf6801addc7e5||
     119||21680738||Burg/Espenshade||-||Antonia||-||http://sloth.sysbiol.cam.ac.uk/test/curs/af743f1eacf15fc||
     120
     121
     122
     123[[BR]]
     124== List of reference genome papers left ==
     125
     126[[BR]]
     127||'''ste11'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
     128||21409593|||
     129||21307597|||
     130||20634885||
     131||20605454||
     132||19417542||
     133||19056896||community curation||
     134||18422613||
     135||17927811||
     136||17289922||
     137||17137508||
     138||17046992||
     139||'''map1'''||
     140||9003326||
     141||12172965||
     142||8668157||
     143||'''fep1'''||
     144||17211681||
     145||18223116||
     146||19252122||
     147||19502236||
     148||19915076||
     149||20435771||
     150||21421748||
     151||21531205||
     152||'''gaf1'''||
     153||9714813||
     154||'''ams2'''||
     155||done||
     156||'''mbx1'''||
     157||18057023||
     158||20032302||
     159||21098635||
     160||21098641||
     161||'''matmc'''||
     162||done||
     163||'''prz1'''||
     164||done||
     165||'''fhl1'''||
    171166||15777722|| ||in progress||Midori||TAS||||
    172 [[BR]]
    173 ||'''mei4'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    174 ||21449049||||||||||||
    175 ||21429938||||||||||||
    176 ||21148298||||||||||||
    177 ||20531409||||||||||||
    178 ||19737749||||||||||||
    179 ||18923505||||||||||||
    180 ||18815595||||||||||||
    181 ||17927811||||||||||||
    182 ||17804800||||||||||||
    183 ||16823445||||||||||||
    184 ||16286472||||||||||||
    185 ||16272747||||||||||||
    186 ||16024772||||||||||||
    187 [[BR]]
    188 ||'''sep1'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    189 ||21098641||||||||||||
    190 ||21098635||||||||||||
    191 ||20852022||||||||||||
    192 ||19636559||||||||||||
    193 ||18931041||||||||||||
    194 ||18057023||||||||||||
    195 ||17922236||||||||||||
    196 ||17596184||||||||||||
    197 ||17332498||||||||||||
    198 ||16972065||||||||||||
    199 ||16317047||||||||||||
    200 ||15829570||||||||||||
    201 ||15611619||||||||||||
    202 [[BR]]
    203 ||'''kfh2'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    204 ||21098641||||||||||||
    205 ||21098635||||||||||||
    206 ||19758441||||||||||||
    207 ||18923505||||||||||||
    208 ||18815595||||||||||||
    209 ||18057023||||||||||||
    210 ||17332498||||||||||||
    211 [[BR]]
    212 ||'''spp27'''||'''First/final Author'''||'''Status'''||'''Curator'''||'''comments'''||'''session'''||
    213 ||18362178||Nakazawa/Yanagida||curated||Antonia||remove annotations?||http://sloth.sysbiol.cam.ac.uk/test/curs/42cf6801addc7e5||       
    214 ||12490702||||||||TAS||||
     167||'''mei4'''||
     168||21449049||
     169||21429938||
     170||21148298||
     171||20531409||
     172||19737749||
     173||18923505||
     174||18815595||
     175||17927811||
     176||17804800||
     177||16823445||
     178||16286472||
     179||16272747||
     180||16024772||
     181||'''sep1'''||
     182||21098641||
     183||21098635||
     184||20852022||
     185||19636559||
     186||18931041||
     187||18057023||
     188||17922236||
     189||17596184||
     190||17332498||
     191||16972065||
     192||16317047||
     193||15829570||
     194||15611619||
     195||'''kfh2'''||
     196||21098641||
     197||21098635||
     198||19758441||
     199||18923505||
     200||18815595||
     201||18057023||
     202||17332498||
     203||'''spp27'''||
     204||12490702||
    215205
    216206