wiki:CuratorTrainingPapers

Version 464 (modified by val_wood, 10 years ago) (diff)

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Papers

Papers with no PMID
Papers costing ££ to access
Antonia's annotations that are not in yet
Midori's annotations not in yet
Some Reviews


Misc Papers


PMIDFirst/final AuthorStatusCuratorcommentssession
17875641Tsutsumi/Kuno?curated Midori-fec781c2e8599d7a externalinternal
20929775Yamagishi/Watanabe?curatedMidoripending FYPO term additions d4e73d1a93ec5860 externalinternal
21813639Ding/Forsburg?curatedMidoriall except multiple mutationsdb0ab2817f38ad5f6 externalinternal
12791993Pardo/Nurse?uncurated---
17658285Colmenares/Moazed?uncurated---
16787941Krapp/Simanis?uncurated---
16864655Wu/Pollard?uncurated---
15857958Bimbo/Balasubramanian?uncurated---
15755919Mishra/Balasubramanian?uncurated---
21091378Andersen/Hartmann?-Petersento doAntonia--
17137508Andersen/Hartmann?-Petersento doAntonia
19682301Paul/Kawamukai?to doAntonia--
19584544Oowatari/Kawamukai?to doAntonia--
12557273Onishi/Fukui?to doAntonia-45b4bbb5f0235d01 externalinternal
2900761Kelly/Beach?to doAntonia-e8c3b5736c2d1f56 externalinternal
7900424Egel/Nielsen?to doAntonialots of diploidsb00a5065fbeb471 externalinternal
20622008Khorosjutina/Gustafsson?curatedAntoniadone77bdec1cc4f8a9e5 externalinternal
20970342Asakawa/Haraguchi?curatedAntoniadone011e491e externalinternal
21725325Li/Cande?curatedAntoniadonea3663cd38f1f2a12 externalinternal
21869531Gupta/Kawamukai?curatedAntoniadonea6a51043db00c124 externalinternal
7672243Stuart/Michell?curatedAntoniadone72c2e89987736e3 externalinternal
8654750Ladds/Davey?curatedAntoniadoneaeb3d0063f6b810 externalinternal
8736868Ladds/Davey?curatedAntoniadone224599b759ca656 externalinternal
8736869Powner/Davey?curatedAntoniadone14f96251db4cbe9b externalinternal
8879046Hughes/Davey?curatedAntoniadone4c6458be418faa18 externalinternal
8879047Powner/Davey?curatedAntoniadone9ff9e4a1410473cd externalinternal
8879048Ladds/Davey?curatedAntoniadoneaf1b2fb92c778beb externalinternal
9191270Watson/Davey?curatedAntoniadoneb9471202da214e59 externalinternal
9191272Ladds/Davey?curatedAntoniadoned7ecd688fa54e0f externalinternal
9191273Hughes/Davey?curatedAntoniadone3cd4cea969e25e08 externalinternal
9191274Powner/Davey?curatedAntoniadone64f7cb8bd028f4bf externalinternal
9388670Ladds/Davey?curatedAntoniadone7a0647a630a18f51 externalinternal
9388668Watson/Davey?curatedAntoniadone176dcc6242e7abfe externalinternal
9450029Watson/Davey?curatedAntoniadone1ff5b9ffa8f643b externalinternal
9450053Hughes/Davey?curatedAntoniadone3a1ad75ead7f6d5f externalinternal
9037770Christensen/Davey?curatedAntoniadoneb00a5065fbeb471 externalinternal
8861202Ladds/Davey?curatedAntoniadonece4cb6da2a1e760 externalinternal
9032282Imai/Yamamoto?curatedAntoniadone8622e3e232348e8d externalinternal
9236781Christensen/Nielsen?curatedAntoniadonebb1e1e8de651f26 externalinternal
9559556Watson/Davey?curatedAntoniadonee43ab58908bb095 externalinternal
10487925Ladds/Davey?curatedAntoniadone787c309b6034127 externalinternal
11115118Ladds/Davey?curatedAntoniadonefa909d739f78709c externalinternal
10417652Watson/Davey?curatedAntoniadone2ad41d1fab1e751c externalinternal
9599405Ladds/Davey?curatedAntoniadone4f75e98b55c64601 externalinternal
12172965Didmon/Davey?curatedAntoniadone3d8e1af5e6b75514 externalinternal
2558974Hoffman/Winston?curatedAntoniadoned9a59af610cff3eb externalinternal
1657593Kitamura/Shimoda?curatedAntoniadone1065390df3fc736f externalinternal
20604974Takayama/Toda?curatedAntoniadone95c8e050e4eb2cd externalinternal
10867006van Beest/Clevers?curatedAntoniadone465139f68bfd6a53 externalinternal
10923028Xiang/Aves?curatedAntoniadone - Some info on mat1 region for future ref70f0e3fc2a2cb939 externalinternal
2157626Hoffman/Winston?curatedAntoniadone but git paper so might be able to refer backbeb013202ef91cd2 externalinternal
8001792Nocero/Hoffman?curatedAntoniadone862994ccfc39b58 externalinternal
1849659Ottilie/Erikson?curatedAntoniadone7cf72508fd0e1dcb externalinternal
21757403Hosomi/Takegawa?curatedAntoniadonef6417d0fe2233b57 externalinternal
12882583Chung/Hoe?curatedAntoniadone1049db9c4e8922e8 externalinternal
8380233Tanaka/Yamamoto?curatedAntoniadone5586aa35c0a6802f externalinternal
18411404Song/He?curatedAntoniadone, but put into Ensembl HTP pipelina6e63b8188666eeb externalinternal
15657058Sio/Kuno?curatedAntoniadone3fbb994e3bfea4 externalinternal
9057003Ongusaha/Michell?curatedAntoniadone3546a54b6fca3ca1 externalinternal
8878976Godfrey/Davey?curatedAntoniadoneb08065e773e2b3b externalinternal
8654751Slaaby/Davey?curatedAntoniadone401082b41eab153 externalinternal
8654749Powner/Davey?curatedAntoniadoned527fd9cb5fb42a externalinternal
9693066Niwa/Morikawa?curatedAntoniadone3e8456a6d6a5d6a0 externalinternal
20579106Harkins/Dolan?curatedAntoniadone - all exp's done using whole cell lysate so cannot annotate to pld1 (they only show pld activity in the cells, it cannot be attributed to a single gene)270530574181e6be externalinternal


PMIDFirst/final AuthorStatusCuratorcommentssession
21253571--Valadded name, updated species distribution, and status of clr5, in Artemis, and mailed Pfam re N-rerm domain-
20298435Fujita/Yamomoto?-Val--
22156749Sazer-Val-external
22156748Ekwall-Val--
2175631Nakamura-Kubo/Nakamura?in progressVal-4794f2ac68f1b5ba external [http://oliver0/pombe/curs/4794f2ac68f1b5ba internal
21844224Kiely/Winston?in progressval--
21862693Buchheit/Burei?curatedvalcontacted by author.n/a updated in Artemis
21386897 Ren /Gould in progress val contacted by author
21880100 Hiraoko/Haraguchi? in progress val contacted by author
21273250 Labbe? ctr4/5 in progress val -
?Saberianfar/Karagiannis?in progress val new gene characterisation
21949882Korvald/ in progress val new gene characterisation
21828039Beaudoin/Labbe?in progress val new gene characterisation
21976488Takeda/complete val cut8 created a session but not added annotations as need extensions, add i) an annotation to capture dimerization, ii) phenotype for abnomal protein localization (of proteasome) in ts allele cut8-566(S201P),iii) cholesterol binding (MF) (residue 1-217, iv trace previous paper which shows ubiquitnated residues are LYS10/11/13/22
16096059Takeda/Yanagida?in progress (proteasome binding res 1-72) cut8val--
20418666Takeda in progress includes cut 8 at stationary phase val--
21712547Hauf in progress val--
21151105Martienssen need to resolve species distribtion of CEN-P orthologs val--
21873461Maraia val--
21900849-pil1, Biogrid queryval--
21984208-hnt3, DONEvalneed to add decreased DNA binding activity for F34A-
21113731Martin-Garcia/Valdivieso?-val-
22105743--Val--
22098069--Val--
22194353Nakase/Takegawa?-Valaat1-
22144909|mentions lsk1-Valhttps://sourceforge.net/tracker/?func=detail&atid=440764&aid=2955993&group_id=36855- 21931816mentions lsk1/lsc1/lsg1-Val--
20605454mentions lsk1-Val--
19328067mentions lsk1-Val--
21445296mentions lsk1-Val--
17502918mentions lsk1/lsc1-Val--
15537703mentions lsk1-Val--
pmidmentions lsk1-Val--
PMID--Val--


21727087Kuhl/Bonnefoy?curatedAntoniaincompleteda671cd7 externalinternal
21745468Tang/Carr?curatedAntoniaincomplete64d2c81c externalinternal
9191268Davey/Christensen?curatedAntoniaincomplete2b3b7ef23078576 externalinternal
2792737Fujioka/Shimoda?curatedAntonia-1cfea3361eac50c externalinternal
17369611Xhemacle/Arcangioli?curatedAntoniaincomplete9b5edbe6f0efcb45 externalinternal
14722091Hamasaki-KatagiricuratedAntoniaincomplete3b98520c5f6ca92f externalinternal
21879336Gupta/Kawamukai?curatedAntoniaincomplete60d1480f79c0c05b externalinternal
19606215Guerin/Rokeach?curatedAntoniaincompletef3083f2895ecf659 externalinternal
18621924Matsuo/Marcus?curatedAntoniaincomplete3771247b8002271 externalinternal
9191269Slaaby/Davey?curatedAntoniaincomplete52d277da6d0f8b4 externalinternal
9191271Davis/Davey?curatedAntoniaincompletebb15399f563a39a8 externalinternal
9388669Powner/Davey?curatedAntoniaincomplete843228633c4b7012 externalinternal
10792724Ladds/Davey?curatedAntoniaincompletea525406360ac556a externalinternal
1563351Nielsen/Egel?curatedAntoniaincomplete17ddda6fd2aaf627 externalinternal
8196631Kjaerulff/Nielsen?curatedAntoniaincomplete4cf5f407a9f3d7f externalinternal
154790DaveycuratedAntoniaincomplete631cdfca46998f0 externalinternal
7975894Aono/Shimoda?curatedAntoniaincompletef3a65af2138844d6 externalinternal
7813430Davey/Matthews?curatedAntoniaincomplete8ccb3c8f2d46fe8 externalinternal
8314086Imai/Yamamoto?curatedAntoniaincomplete1cfaa3add2d5fd87 externalinternal
7651414Willer/Nielsen?curatedAntoniaincomplete24e9f1d9ea02f952 externalinternal
9418887Powner/Davey?curatedAntoniaincompleteb6bfec3d1b81e412 externalinternal
10931354Davis/Davey?curatedAntoniaincompleteeb07f91aa716d2b2 externalinternal
15580593Goddard/Davey?curatedAntoniaincomplete285a46669a679913 externalinternal
15659165Ladds/Davey?curatedAntoniaincomplete1bdef2cd0551c52 externalinternal
19285552Smith/Ladds?curatedAntoniaincompletec472825384eadfb0 externalinternal
21118960Rodríguez-Sánchez/HernándezcuratedAntoniaincompletef372ba194a5d127c externalinternal
18059475Shimada/Murakami?curatedAntoniaincomplete5fd244fcaaf1c2fa externalinternal
10438147Won/Yoo? curatedAntoniaincompleteae55f5308b1fdb21 externalinternal
17248713Meade/Gutz?curatedAntoniaincompletef033fde52b328f44 externalinternal
2328719Nielsen/Egel?curatedAntoniaincompleted47046a87d5d426 externalinternal
17452352Takayama/Takahashi?curatedAntoniaincomplete7d59277f413fd328 externalinternal
18077559Takayama/Takahashi?curatedAntoniaincomplete440ff0786082ec49 externalinternal
20230746Takayama/Saitoh?curatedAntoniaincomplete1f8813e260d783d1 externalinternal
18158900Dunleavy/Allshire?curatedAntoniaincompletee98e46c39b053293 externalinternal
16928959Deng/Kuno?curatedAntoniaincomplete9e9fe89a25f614dc externalinternal
20018864Hamasaki-Katagiri/Ames?curatedAntoniaincompleteeeccd430b89acffb externalinternal
18362178Nakazawa/Yanagida?curatedAntoniaremove annotations?42cf6801addc7e5 externalinternal
21680738Burg/Espenshade?curatedAntoniaincompleteaf743f1eacf15fc externalinternal
9427748Sugiura/Kuno?curatedAntoniaincomplete3083b0a685ce4150 externalinternal
8227198Byrne/Hoffman?curatedAntoniaincomplete219e86a87274fe5f externalinternal
18279662Xin/Qi?curatedAntoniaincomplete9276d468f83256bf externalinternal
21949882Korvald/Alseth?curatedAntoniaincompletecb309c1fc155632b externalinternal
11937031Noguchi/Russell?curatedAntoniaincomplete8e48c14b6338b11 externalinternal
21858190Prevorovsky/Bahler?curatedAntoniaincomplete72dd3fcf9aae482b externalinternal
11461899Chung/Yoo?curatedAntoniaincomplete4c58cb4b9203cd31 externalinternal
7923372Chang/Wigler?curatedAntoniaincomplete7537db502e936856 externalinternal
21960007Adhikary/Eichman?curatedAntoniaincompletebcb8d4f171dffc70 externalinternal
1448087Ottilie/Erikson?curatedAntoniaincomplete293cbd0b3d79a817 externalinternal
16884933Goddard/Davey?curatedAntoniaincompletea0646080ac73a636 externalinternal
1349418Nishi/Beppu?curatedAntoniaincomplete1654d009749b8a7b externalinternal
11470243Yokoyama/Setaka?curatedAntoniaincompleted6acad95cdc1056 externalinternal
21449051Cabrera/Chang?curatedAntoniaincomplete85853385252614cd externalinternal
15075260Cho/Hofmann?curatedAntoniaincomplete67ea8121a7c3e6f0 externalinternal
9017391Chaudhuri/Bachhawat?curatedAntoniaincomplete40aa30b33b608f68 externalinternal
10430904Kudo/Horinouchi?-Antonia-e57eb8f19a92186 externalinternal
8769419Saitoh/Yanagida?-Antonia-http://www.ncbi.nlm.nih.gov/pubmed/8769419
8719881Takegawa/Emr?curatedAntoniaincompletehttp://oliver0.sysbiol.cam.ac.uk/pombe/curs/6b8790f5b76d8e69
1448066Speiser/Ow?curatedAntoniaincompletehttp://oliver0.sysbiol.cam.ac.uk/pombe/curs/23b994e637b6f0cc
1958212Mutoh/Hayashi?curatedAntoniaincompletehttp://oliver0.sysbiol.cam.ac.uk/pombe/curs/c0ae8d0a9450e350
8346915Juang/Ow?curatedAntoniaincompletehttp://oliver0.sysbiol.cam.ac.uk/pombe/curs/8699a16a5d40e84b
10368185Ha/Cobbett?curatedAntoniaincompletehttp://oliver0.sysbiol.cam.ac.uk/pombe/curs/f8be2979bdfda749
12905027Maier/Clemens?curatedAntoniaincompletehttp://oliver0.sysbiol.cam.ac.uk/pombe/curs/d9eaa59234dc496a
1396551Ortiz/Ow?-Antonia-http://oliver0.sysbiol.cam.ac.uk/pombe/curs/e4bf4f71cadcf254
21620704Basu/Chang?curatedMidoriincompleted9c2950e923ec818 externalinternal
21376595Padmanabhan/Balasubramanian?in progressMidori-a206afb9651e2886 externalinternal


List of reference genome papers left


ste11
21409593
21307597
20634885
20605454
19417542
19056896community curation
18422613
17927811
17289922
17137508
17046992
map1
9003326
12172965
8668157
fep1
17211681
18223116
19252122
19502236
19915076
20435771
21421748
21531205
gaf1
9714813
ams2
done
mbx1
18057023
20032302
21098635
21098641
matmc
done
prz1
done
fhl1
15777722Midoriin progress (done pending FYPO update & getting GO in sync between canto & artemis)4e98dd2ff85e7e86 externalinternal
mei4
21449049
21429938
21148298
20531409
19737749
18923505
18815595
17927811
17804800
16823445
16286472
16272747
16024772
sep1
21098641
21098635
20852022
19636559
18931041
18057023
17922236
17596184
17332498
16972065
16317047
15829570
15611619
kfh2
21098641
21098635
19758441
18923505
18815595
18057023
17332498
spp27
12490702


Annotations yet to be implemented


21775631
gene term extension
mug79expression is meiosis specific
mug79requested GO term for meiosis specific spindle pole body GO:0035974