Changes between Version 15 and Version 16 of GOAnnotationGuidelines


Ignore:
Timestamp:
Jan 27, 2015, 5:07:37 PM (6 years ago)
Author:
vw253
Comment:

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  • GOAnnotationGuidelines

    v15 v16  
    9696   * Note that the GO term [http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0016246 RNA interference (RNAi; GO:0016246)] is not an ancestor of GO:0031048, because in GO RNAi is defined more strictly, according to the original "post-transcriptional" usage.
    9797
     98 * Regulation of transcription and signalling pathways
     99Regulation of transcription and signalling pathways Consists of four components: a signal transduction cascade, a transcription factor, the process of transcription and a downstream process. The signal transduction cascade regulates the downstream process ONLY. The transcription factor regulates transcription AND the downstream process. For instance, the transcription factor ste11 should be annotated to positive regulation of transcription involved in sporulation AND signal transduction involved in positive regulation of sporulation. Mam2 in contrast is only annotated to signal transduction involved in positive regulation of sporulation.
     100
    98101 * Translation
    99102  * For annotations to translation, it should always be possible to specify [http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0002181 cytoplasmic translation (GO:0002181)] or [http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0032543 mitochondrial translation (GO:0032543)]