Changes between Version 34 and Version 35 of GOAnnotationGuidelines


Ignore:
Timestamp:
Feb 25, 2015, 10:40:06 AM (7 years ago)
Author:
vw253
Comment:

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  • GOAnnotationGuidelines

    v34 v35  
    100100
    101101 * Response to stress
    102   * The most generic response to stress terms ('response to stress' [http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0006950 GO:0006950] and 'cellular response to stress' [http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0033554 GO:0033554]) are not available for direct manual annotation. Usually you would minimally
    103    * specify "cellular" and a specific stress, e.g. [http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0034599 cellular response to oxidative stress (GO:0034599)]  OR
    104    * regulation of a specific process in response to stress, e.g. [http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0043555 regulation of translation in response to stress (GO:0043555)]
    105 
     102   We do not usually annotate to "response to stress" terms unless we can say specifically which process is altered
     103   *   i.e. regulation of cytoplasmic translation in response to stress
     104 
    106105 * Cell polarity related
    107106  * When using terms related to cell polarity, make sure that if you are annotating a process that affects cell shape, you select one of the terms that specifies "regulating cell shape", e.g. [http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0071963 establishment or maintenance of cell polarity regulating cell shape (GO:0071963)] or one of its descendants.