Changes between Version 58 and Version 59 of GOAnnotationGuidelines
- Timestamp:
- Feb 25, 2015, 4:31:57 PM (6 years ago)
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GOAnnotationGuidelines
v58 v59 35 35 * Basic Format: relation(Database prefix:database_ID). Additional format/syntax documentation [AnnotationExtensionSyntax PomBase Annotation Extension Syntax documentation] [http://wiki.geneontology.org/index.php/Annotation_Extension#The_basic_format GOC Annotation Extension Syntax documentation] 36 36 37 * When to use an extension versus requesting a new term? See [wiki:PrePostComposeGO PomBase "Precompose or postcompose?" wiki] 38 39 * Relations in use: 40 * [http://viewvc.geneontology.org/viewvc/GO-SVN/trunk/ontology/extensions/go_annotation_extension_relations.obo OBO-format file of relations (GO site)] 37 * Which relations can be used in GO extensions? 41 38 * Graphical View http://www.ebi.ac.uk/QuickGO/AnnotationExtensionRelations.html 42 39 * [wiki:ListOfRelationsForGO List of relations used by PomBase for GO] 43 40 * [OntologiesInUse Ontologies used in col 16 and examples of uses] 44 41 42 43 * When to use an extension versus requesting a new term? See [wiki:PrePostComposeGO PomBase "Precompose or postcompose?" wiki] 44 45 46 45 47 46 48