Changes between Version 85 and Version 86 of GOAnnotationGuidelines

Timestamp:

Feb 25, 2015, 6:42:52 PM (6 years ago)

Author:

vw253

Comment:

--

GOAnnotationGuidelines

@@ -62 +62 @@
    *  When to make a GO process  annotation  
       *   GO or phenotype  ?
-         * We use GO annotations to describe direct involvement in a process, or its regulation (see below for more detail on regulation). We don't  annotate indirect upstream effects. Caution must therefore be used when using IMP to make process annotation, as it often isn't clear whether the effect is directly involved, regulation, or only affecting a process indirectly.
- 
-Often a number of phenotypes are used to make a GO annotation. [[BR]]
- 
-        * Example 1 dil1 in /curs/c7fac5251ee4f493/ro/ where annotation to dynein-driven meiotic oscillatory nuclear movement with IMP is based on a combination of phenotypes :
-            * decreased meiotic recombination 
+         * We use GO annotations to describe direct involvement in a process, or its regulation (see below for more detail on regulation). We don't  annotate indirect upstream effects. Caution must therefore be used when using IMP to make process annotation, as it often isn't clear whether the effect is directly involved, regulation, or only affecting a process indirectly. Often a number of phenotypes are used to make a GO annotation. 
+         * Example 1 dil1 in /curs/c7fac5251ee4f493/ro/ where annotation to dynein-driven meiotic oscillatory nuclear movement with IMP is based on a combination of phenotypes :
+              * decreased meiotic recombination 
             * horsetail movement abolished 
             * unequal meiotic chromosome segregation 
             * decreased protein localization to microtubule cytoskeleton 
-
          * Example 2 nda3 and mug164 annotations to intracellular distribution of mitochondria with IMP is based on
             * abolished mitochondrion inheritance