Changes between Version 85 and Version 86 of GOAnnotationGuidelines


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Timestamp:
Feb 25, 2015, 6:42:52 PM (6 years ago)
Author:
vw253
Comment:

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  • GOAnnotationGuidelines

    v85 v86  
    6262   *  When to make a GO process  annotation 
    6363      *   GO or phenotype  ?
    64          * We use GO annotations to describe direct involvement in a process, or its regulation (see below for more detail on regulation). We don't  annotate indirect upstream effects. Caution must therefore be used when using IMP to make process annotation, as it often isn't clear whether the effect is directly involved, regulation, or only affecting a process indirectly.
    65  
    66 Often a number of phenotypes are used to make a GO annotation. [[BR]]
    67  
    68         * Example 1 dil1 in /curs/c7fac5251ee4f493/ro/ where annotation to dynein-driven meiotic oscillatory nuclear movement with IMP is based on a combination of phenotypes :
    69             * decreased meiotic recombination
     64         * We use GO annotations to describe direct involvement in a process, or its regulation (see below for more detail on regulation). We don't  annotate indirect upstream effects. Caution must therefore be used when using IMP to make process annotation, as it often isn't clear whether the effect is directly involved, regulation, or only affecting a process indirectly. Often a number of phenotypes are used to make a GO annotation.
     65         * Example 1 dil1 in /curs/c7fac5251ee4f493/ro/ where annotation to dynein-driven meiotic oscillatory nuclear movement with IMP is based on a combination of phenotypes :
     66              * decreased meiotic recombination
    7067            * horsetail movement abolished
    7168            * unequal meiotic chromosome segregation
    7269            * decreased protein localization to microtubule cytoskeleton
    73 
    7470         * Example 2 nda3 and mug164 annotations to intracellular distribution of mitochondria with IMP is based on
    7571            * abolished mitochondrion inheritance