Changes between Version 103 and Version 104 of MatrixProject


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Timestamp:
Nov 7, 2012, 10:37:53 AM (9 years ago)
Author:
val_wood
Comment:

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  • MatrixProject

    v103 v104  
    11
    2 = QC of GO annotation using annotation overlaps =
     2 = QC of GO annotation using annotation overlaps =
     3
     4 == Background ==
    35
    46This project leverages the  existing annotation,  to identify annotations which conflict with current biological knowledge.
     
    79More specific rules are created by identifying specific processes, complexes or functions which *are* allowed in intersections, and  can be extended over time to take account of new biology, or existing annotations in other organisms.
    810
     11 == Used to ==
    912Querying annotation overlaps is a powerful method to:
    1013 * Identify annotation errors (curated and automated)
     
    4043
    4144 
    42 
    43 
    44  
    45 
    46 
     45 == Method ==
     46
     47Use
    4748Matrix tool:
    48 
    4949http://stove.lbl.gov:8899/cgi-bin/amigo/amigo_exp?mode=nmatrix
     50
     51with GO slim list (template list at the bottom of this page)
     52
    5053
    5154==  Amino acid metabolism (Term 1) ==