Changes between Version 169 and Version 170 of MatrixProject


Ignore:
Timestamp:
Jan 3, 2013, 11:52:10 PM (9 years ago)
Author:
val_wood
Comment:

--

Legend:

Unmodified
Added
Removed
Modified
  • MatrixProject

    v169 v170  
    319319|| term ID 1 || term ID 2|| term name 2|| exceptions (everything in this column which is NOT a GO ID or "OR/AND" needs to be in brackets|| comments/checked in species ||
    320320
    321 || GO:0006766|| GO:0006310 || DNA recombination || NO OVERLAP ||S.p.; S.c||
    322 || GO:0006766|| GO:0006281 || DNA repair || NO OVERLAP ||S.p.; S.c||
    323 || GO:0006766|| GO:0006260 || DNA replication || NO OVERLAP ||S.p.; S.c||
    324 || GO:0006766|| GO:0030437 || ascospore formation || NO OVERLAP ||S.p.; S.c||
    325 || GO:0006766|| GO:0005975 || carbohydrate metabolic process || NO OVERLAP ||S.p.||
    326 || GO:0006766|| GO:0007155 || cell adhesion || NO OVERLAP ||S.p.; S.c||
    327 || GO:0006766|| GO:0006520 || cellular amino acid metabolic process || - ||-||
    328 || GO:0006766|| GO:0070882 || cellular cell wall organization or biogenesis || NO OVERLAP ||S.p.; S.c||
    329 || GO:0006766|| GO:0016568 || chromatin modification || NO OVERLAP ||S.p.||
    330 || GO:0006766|| GO:0051276 || chromosome organization  || NO OVERLAP ||S.p.; S.c||
    331 || GO:0006766|| GO:0007059 || chromosome segregation || NO OVERLAP ||S.p.; S.c||
    332 || GO:0006766|| GO:0051186 || cofactor metabolic process  || - ||-||
    333 || GO:0006766|| GO:0000747 || conjugation with cellular fusion  ||NO OVERLAP ||S.p.; S.c||
    334 || GO:0006766|| GO:0000910 || cytokinesis || NO OVERLAP ||S.p.||
    335 || GO:0006766|| GO:0002181 || cytoplasmic translation  || NO OVERLAP ||S.p.; S.c.||
    336 || GO:0006766|| GO:0007010 || cytoskeleton organization  || NO OVERLAP ||S.p.; S.c||
    337 || GO:0006766|| GO:0007163 || establishment or maintenance of cell polarity  || NO OVERLAP ||S.p.||
    338 || GO:0006766|| GO:0006091 || generation of precursor metabolites and energy  || NO OVERLAP ||S.p.||
    339 || GO:0006766|| GO:0006629 || lipid metabolic process  || NO OVERLAP ||S.p.||
    340 || GO:0006766|| GO:0016071 || mRNA metabolic process  || NO OVERLAP ||S.p.; S.c||
    341 || GO:0006766|| GO:0007126 || meiosis  || NO OVERLAP ||S.p.; S.c||
    342 || GO:0006766|| GO:0007005 || mitochondrion organization  || NO OVERLAP ||S.p.||
    343 || GO:0006766|| GO:0071941 || nitrogen cycle metabolic process  || - ||||
    344 || GO:0006766|| GO:0055086 || nucleobase-containing small molecule metabolic process  || - ||-||
    345 || GO:0006766|| GO:0006913 || nucleocytoplasmic transport  || NO OVERLAP ||S.p.; S.c||
    346 || GO:0006766|| GO:0007031 || peroxisome organization  || NO OVERLAP ||S.p.; S.c||
    347 || GO:0006766|| GO:0030163 || protein catabolic process  || NO OVERLAP ||S.p.; S.c||
    348 || GO:0006766|| GO:0006461 || protein complex assembly  || NO OVERLAP ||S.p.; S.c||
    349 || GO:0006766|| GO:0006457 || protein folding  || NO OVERLAP ||S.p.; S.c||
    350 || GO:0006766|| GO:0006486 || protein glycosylation  || NO OVERLAP ||S.p.; S.c||
    351 || GO:0006766|| GO:0051604 || protein maturation  || NO OVERLAP ||S.p.; S.c||
    352 || GO:0006766|| GO:0070647 || protein modification by small protein conjugation or removal  || NO OVERLAP ||S.p.; S.c||
    353 || GO:0006766|| GO:0006605 || protein targeting  || NO OVERLAP ||S.p.; S.c||
    354 || GO:0006766|| GO:0007346 || regulation of mitotic cell cycle  || NO OVERLAP ||S.p.; S.c||
    355 || GO:0006766|| GO:0042254 || ribosome biogenesis  || NO OVERLAP ||S.p.; S.c||
    356 || GO:0006766|| GO:0023052 || signaling  || NO OVERLAP ||S.p.; S.c||
    357 || GO:0006766|| GO:0006399 || tRNA metabolic process  || NO OVERLAP ||S.p.||
    358 || GO:0006766|| GO:0006351 || transcription, DNA-dependent  || NO OVERLAP ||S.p.||
    359 || GO:0006766|| GO:0055085 || transmembrane transport  || NO OVERLAP ||S.p.||
    360 || GO:0006766|| GO:0007033 || vacuole organization  || NO OVERLAP ||S.p.; S.c||
    361 || GO:0006766|| GO:0016192 || vesicle-mediated transport  || NO OVERLAP ||S.p.; S.c||
     321|| GO:0006766|| GO:0006310 || DNA recombination || NO OVERLAP ||S.p.; S.c; M.m (1, looks dodgy ifn2 same paper as snai2 below)||
     322|| GO:0006766|| GO:0006281 || DNA repair || NO OVERLAP ||S.p.; S.c; M.m||
     323|| GO:0006766|| GO:0006260 || DNA replication || NO OVERLAP ||S.p.; S.c; M.m||
     324|| GO:0006766|| GO:0030437 || ascospore formation || NO OVERLAP ||S.p.; S.c; M.m (n/a)||
     325|| GO:0006766|| GO:0005975 || carbohydrate metabolic process || MOUSE LOTS ||S.p.||
     326|| GO:0006766|| GO:0007155 || cell adhesion || LATER ||S.p.; S.c||
     327|| GO:0006766|| GO:0006520 || cellular amino acid metabolic process || LATER||-||
     328|| GO:0006766|| GO:0070882 || cellular cell wall organization or biogenesis || NO OVERLAP ||S.p.; S.c; M.m||
     329|| GO:0006766|| GO:0016568 || chromatin modification || NO OVERLAP ||S.p.; M.m (1, looks dodgy, Snai2)||
     330|| GO:0006766|| GO:0051276 || chromosome organization  || NO OVERLAP ||S.p.; S.c; M.m (1, looks dodgy, Snai2)||
     331|| GO:0006766|| GO:0007059 || chromosome segregation || NO OVERLAP ||S.p.; S.c; M.m||
     332|| GO:0006766|| GO:0051186 || cofactor metabolic process  || LOTS ||-||
     333|| GO:0006766|| GO:0000747 || conjugation with cellular fusion  ||NO OVERLAP ||S.p.; S.c; M.m (n/a)||
     334|| GO:0006766|| GO:0000910 || cytokinesis || NO OVERLAP ||S.p.; M.m; S.c||
     335|| GO:0006766|| GO:0002181 || cytoplasmic translation  || NO OVERLAP ||S.p.; S.c.; M.m||
     336|| GO:0006766|| GO:0007010 || cytoskeleton organization  || NO OVERLAP ||S.p.; S.c; M.m||
     337|| GO:0006766|| GO:0007163 || establishment or maintenance of cell polarity  || NO OVERLAP ||S.p.; M.m; S.c||
     338|| GO:0006766|| GO:0006091 || generation of precursor metabolites and energy  || NO OVERLAP ||S.p.; M.m; S.c||
     339|| GO:0006766|| GO:0006629 || lipid metabolic process  || MOUSE LOTS ||S.p.||
     340|| GO:0006766|| GO:0016071 || mRNA metabolic process  || NO OVERLAP ||S.p.; S.c; M.m||
     341|| GO:0006766|| GO:0007126 || meiosis  || LATER ||S.p.; S.c||
     342|| GO:0006766|| GO:0007005 || mitochondrion organization  || NO OVERLAP ||S.p.; M.m||
     343|| GO:0006766|| GO:0071941 || nitrogen cycle metabolic process  || - || M.m. ************||
     344|| GO:0006766|| GO:0055086 || nucleobase-containing small molecule metabolic process  || LATER ||-||
     345|| GO:0006766|| GO:0006913 || nucleocytoplasmic transport  || NO OVERLAP ||S.p.; S.c; M.m (4 but snai2 and Ifng look dodgy)||
     346|| GO:0006766|| GO:0007031 || peroxisome organization  || NO OVERLAP ||S.p.; S.c; M.m||
     347|| GO:0006766|| GO:0030163 || protein catabolic process  || NO OVERLAP ||S.p.; S.c; M.m (3 but look dodgy)||
     348|| GO:0006766|| GO:0006461 || protein complex assembly  || NO OVERLAP ||S.p.; S.c; M.m (2 look dodgy)||
     349|| GO:0006766|| GO:0006457 || protein folding  || NO OVERLAP ||S.p.; S.c; M.m||
     350|| GO:0006766|| GO:0006486 || protein glycosylation  || NO OVERLAP ||S.p.; S.c; M.m||
     351|| GO:0006766|| GO:0051604 || protein maturation  || NO OVERLAP ||S.p.; S.c; M.m||
     352|| GO:0006766|| GO:0070647 || protein modification by small protein conjugation or removal  || NO OVERLAP ||S.p.; S.c; M.m (1 but looks wrong for UB med conjugation)||
     353|| GO:0006766|| GO:0006605 || protein targeting  || NO OVERLAP ||S.p.; S.c; M.m (5 but look dodgy)||
     354|| GO:0006766|| GO:0007346 || regulation of mitotic cell cycle  || NO OVERLAP ||S.p.; S.c; M.m (except tnf, check)||
     355|| GO:0006766|| GO:0042254 || ribosome biogenesis  || NO OVERLAP ||S.p.; S.c; M.m||
     356|| GO:0006766|| GO:0023052 || signaling  || MOUSE LOTS ||S.p.; S.c||
     357|| GO:0006766|| GO:0006399 || tRNA metabolic process  || NO OVERLAP ||S.p.; M.m *********||
     358|| GO:0006766|| GO:0006351 || transcription, DNA-dependent  ||MOUSE LOTS ||S.p.||
     359|| GO:0006766|| GO:0055085 || transmembrane transport  || MOUSE LOTS ||S.p.||
     360|| GO:0006766|| GO:0007033 || vacuole organization  || NO OVERLAP ||S.p.; S.c; M.m||
     361|| GO:0006766|| GO:0016192 || vesicle-mediated transport  || NO OVERLAP ||S.p.; S.c; M.m||
    362362
    363363