Changes between Version 214 and Version 215 of MatrixProject


Ignore:
Timestamp:
Apr 23, 2013, 9:36:26 AM (8 years ago)
Author:
val_wood
Comment:

--

Legend:

Unmodified
Added
Removed
Modified
  • MatrixProject

    v214 v215  
    506506
    507507||term ID 1|| term ID 2||term name 2||Exceptions GO:xxxxxxx (comments free text)|| checked in species S.p; etc {comments in curly brackets}||
    508 || GO:0006486||GO:0006310|| DNA recombination || NO OVERLAP || S.p;|| ||GO:0006486||GO:0006281|| DNA repair || NO OVERLAP || S.p;||
    509 || GO:0006486||GO:0006260|| DNA replication || NO OVERLAP || S.p;||
    510 || GO:0006486||GO:0030437|| ascospore formation || NO OVERLAP || S.p;||
    511 || GO:0006486||GO:0005975|| carbohydrate metabolic process || LOTS (makes sense - Is_a relationship between them) ||-||
    512 || GO:0006486||GO:0007155|| cell adhesion || - ||-||
    513 || GO:0006486||GO:0006520|| cellular amino acid metabolic process || NO OVERLAP || S.p;||
    514 || GO:0006486||GO:0070882|| cellular cell wall organization or biogenesis || NO OVERLAP || S.p;||
    515 || GO:0006486||GO:0016568|| chromatin modification || NO OVERLAP || S.p;||
    516 || GO:0006486||GO:0051276|| chromosome organization  || NO OVERLAP || S.p;||
    517 || GO:0006486||GO:0007059|| chromosome segregation || NO OVERLAP || S.p;||
    518 || GO:0006486||GO:0051186|| cofactor metabolic process  || NO OVERLAP || S.p;||
    519 || GO:0006486||GO:0000747|| conjugation with cellular fusion  || NO OVERLAP (actually 3 but see notes) || S.p;||
    520 || GO:0006486||GO:0000910|| cytokinesis || NO OVERLAP (see notes) ||-||
    521 || GO:0006486||GO:0002181|| cytoplasmic translation  || NO OVERLAP || S.p;||
    522 || GO:0006486||GO:0007010|| cytoskeleton organization  || NO OVERLAP || S.p;||
    523 || GO:0006486||GO:0007163|| establishment or maintenance of cell polarity  || NO OVERLAP || S.p;||
    524 || GO:0006486||GO:0006091|| generation of precursor metabolites and energy  || NO OVERLAP || S.p;||
    525 || GO:0006486||GO:0006629|| lipid metabolic process  || - || -||
    526 || GO:0006486||GO:0016071|| mRNA metabolic process  || NO OVERLAP || S.p;||
    527 || GO:0006486||GO:0007126|| meiosis  || NO OVERLAP || S.p;||
    528 || GO:0006486||GO:0007005|| mitochondrion organization  || NO OVERLAP || S.p;||
    529 || GO:0006486||GO:0071941|| nitrogen cycle metabolic process  || NO OVERLAP || S.p;||
    530 || GO:0006486||GO:0055086|| nucleobase-containing small molecule metabolic process  || - ||-||
    531 || GO:0006486||GO:0006913|| nucleocytoplasmic transport  || NO OVERLAP || S.p;||
    532 || GO:0006486||GO:0007031|| peroxisome organization  || NO OVERLAP || S.p;||
    533 || GO:0006486||GO:0030163|| protein catabolic process  || - ||-||
    534 || GO:0006486||GO:0006461|| protein complex assembly  || NO OVERLAP ||S.p;||
    535 || GO:0006486||GO:0006457|| protein folding  || NO OVERLAP || S.p;||
    536 || GO:0006486||GO:0051604|| protein maturation  || NO OVERLAP (none in pombe but probably should….)|| S.p;||
    537 || GO:0006486||GO:0070647|| protein modification by small protein conjugation or removal  || NO OVERLAP || S.p;||
    538 || GO:0006486||GO:0006605|| protein targeting  || NO OVERLAP || S.p;||
    539 || GO:0006486||GO:0007346|| regulation of mitotic cell cycle  || - ||-||
    540 || GO:0006486||GO:0042254|| ribosome biogenesis  || NO OVERLAP || S.p;||
    541 || GO:0006486||GO:0023052|| signaling  || - ||-||
    542 || GO:0006486||GO:0006399|| tRNA metabolic process  || NO OVERLAP || S.p;||
    543 || GO:0006486||GO:0006351|| transcription, DNA-dependent  || NO OVERLAP || S.p;||
    544 || GO:0006486||GO:0055085|| transmembrane transport  || - ||-||
    545 || GO:0006486||GO:0007033|| vacuole organization  || NO OVERLAP || S.p;||
    546 || GO:0006486||GO:0016192|| vesicle-mediated transport  || NO OVERLAP || S.p;||
    547 || GO:0006486||GO:0006766|| vitamin metabolic process  || NO OVERLAP || S.p;||
     508||GO:0006486||GO:0006310|| DNA recombination || NO_OVERLAP || S.p;||
     509||GO:0006486||GO:0006281|| DNA repair || NO_OVERLAP || S.p;||
     510||GO:0006486||GO:0006260|| DNA replication || NO_OVERLAP || S.p;||
     511||GO:0006486||GO:0030437|| ascospore formation || NO_OVERLAP || S.p;||
     512||GO:0006486||GO:0005975|| carbohydrate metabolic process || LOTS (makes sense - Is_a relationship between them) ||-||
     513||GO:0006486||GO:0007155|| cell adhesion || - ||-||
     514||GO:0006486||GO:0006520|| cellular amino acid metabolic process || NO_OVERLAP || S.p;||
     515||GO:0006486||GO:0070882|| cellular cell wall organization or biogenesis || NO_OVERLAP || S.p;||
     516||GO:0006486||GO:0016568|| chromatin modification || NO_OVERLAP || S.p;||
     517||GO:0006486||GO:0051276|| chromosome organization  || NO_OVERLAP || S.p;||
     518||GO:0006486||GO:0007059|| chromosome segregation || NO_OVERLAP || S.p;||
     519||GO:0006486||GO:0051186|| cofactor metabolic process  || NO_OVERLAP || S.p;||
     520||GO:0006486||GO:0000747|| conjugation with cellular fusion  || NO_OVERLAP (actually 3 but see notes) || S.p;||
     521||GO:0006486||GO:0000910|| cytokinesis || NO_OVERLAP (see notes) ||-||
     522||GO:0006486||GO:0002181|| cytoplasmic translation  || NO_OVERLAP || S.p;||
     523||GO:0006486||GO:0007010|| cytoskeleton organization  || NO_OVERLAP || S.p;||
     524||GO:0006486||GO:0007163|| establishment or maintenance of cell polarity  || NO_OVERLAP || S.p;||
     525||GO:0006486||GO:0006091|| generation of precursor metabolites and energy  || NO_OVERLAP || S.p;||
     526||GO:0006486||GO:0006629|| lipid metabolic process  || - || -||
     527||GO:0006486||GO:0016071|| mRNA metabolic process  || NO_OVERLAP || S.p;||
     528||GO:0006486||GO:0007126|| meiosis  || NO OVERLAP || S.p;||
     529||GO:0006486||GO:0007005|| mitochondrion organization  || NO_OVERLAP || S.p;||
     530||GO:0006486||GO:0071941|| nitrogen cycle metabolic process  || NO_OVERLAP || S.p;||
     531||GO:0006486||GO:0055086|| nucleobase-containing small molecule metabolic process  || - ||-||
     532||GO:0006486||GO:0006913|| nucleocytoplasmic transport  || NO_OVERLAP || S.p;||
     533||GO:0006486||GO:0007031|| peroxisome organization  || NO_OVERLAP || S.p;||
     534||GO:0006486||GO:0030163|| protein catabolic process  || - ||-||
     535||GO:0006486||GO:0006461|| protein complex assembly  || NO_OVERLAP ||S.p;||
     536||GO:0006486||GO:0006457|| protein folding  || NO_OVERLAP || S.p;||
     537||GO:0006486||GO:0051604|| protein maturation  || NO_OVERLAP (none in pombe but probably should….)|| S.p;||
     538||GO:0006486||GO:0070647|| protein modification by small protein conjugation or removal  || NO_OVERLAP || S.p;||
     539||GO:0006486||GO:0006605|| protein targeting  || NO_OVERLAP || S.p;||
     540||GO:0006486||GO:0007346|| regulation of mitotic cell cycle  || - ||-||
     541||GO:0006486||GO:0042254|| ribosome biogenesis  || NO_OVERLAP || S.p;||
     542||GO:0006486||GO:0023052|| signaling  || - ||-||
     543||GO:0006486||GO:0006399|| tRNA metabolic process  || NO_OVERLAP || S.p;||
     544||GO:0006486||GO:0006351|| transcription, DNA-dependent  || NO_OVERLAP || S.p;||
     545||GO:0006486||GO:0055085|| transmembrane transport  || - ||-||
     546||GO:0006486||GO:0007033|| vacuole organization  || NO_OVERLAP || S.p;||
     547||GO:0006486||GO:0016192|| vesicle-mediated transport  || NO_OVERLAP || S.p;||
     548||GO:0006486||GO:0006766|| vitamin metabolic process  || NO_OVERLAP || S.p;||
    548549
    549550Protein glycosylation updates