Changes between Version 118 and Version 119 of MidoriCuratedPapers


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Timestamp:
Jun 15, 2015, 4:50:29 PM (5 years ago)
Author:
mah79
Comment:

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  • MidoriCuratedPapers

    v118 v119  
    197197
    198198||PMID:11973289||
    199 ||mcm4,6,7 alleles all also tested in presence of corresponding ts (mcm4-M68, mcm6-268, mcm7-98) at high temp||
    200 ||mcm6+ with C-terminal 3xHA + mcm6-268 ts||inviable if HAtagged not induced, viable if tagged overexp||
    201 
    202 [[BR]]
    203 
    204 ||PMID:12185500||
    205 ||cdc23-M36 mcm2 cdc19-P1||inviable st temp 29||
    206 ||cdc23-M36 mcm6 mis5-268||inviable st temp 29||
    207 ||cdc23-1E2 mcm2 cdc19-P1||inviable st temp 27||
    208 ||cdc23-1E2 mcm6 mis5-268||inviable st temp 27||
    209 ||cdc23-M36 mcm4 cdc12-K46||inviable st temp 25||
    210 ||cdc23-M36 mcm5 nda4-108||inviable st temp 25||
    211 ||cdc23+ overexp, mcm5 nda4-108||viable temp 25||
    212 ||gene exp cdc23|| mRNA level constant throughout cell cycle||
     199||mcm4,6,7 alleles all also tested in presence of corresponding ts (mcm4-M68, mcm6-268, mcm7-98) at high temp||might not be worth annotating, since it doesn't add new info (and there are lots, so it would be a pain)||
    213200
    214201
     
    216203
    217204||PMID:1849107||
    218 ||cyr1+ overexp, git1-1(unknown)||normal glucose repression (i.e. normal neg reg txn by glucose, fypo:1865)||
    219 ||cyr1+ overexp, git3-200(unknown)||normal glucose repression||
    220 ||cyr1+ overexp, git5-75(unknown)||normal glucose repression||
    221 ||cyr1+ overexp, git7-235(unknown)||normal glucose repression||
    222 ||cyr1+ overexp, git8-60(unknown)||normal glucose repression||
    223 ||cyr1+ overexp, git10-201(unknown)||normal glucose repression||
    224 ||cgs1-1, cyr1-git2-1||normal glucose repression||
    225 ||cgs1-1, pka1-git6-261||fypo:44 abnormal glucose repression||
    226205||cyr1/git2 intragenic complementation - groups||git2-7, git2-110, git2-266, git2-18, git2-68, git2-216, git2-226, git2-210||
    227206||compl. group||git2-61, git2-29, git2-83||
     
    231210
    232211||PMID:1883874||
    233 ||ras1-val17(G17V), gap1+ overexp||normal conjugation micr||
    234 ||sar1 disruption homozygous diploid||fypo:279 micr||
     212||phenotypes entered for epistasis||
    235213||epistasis||ste6delta gpa1delta (aka sar1delta) (technically both disruptions) same phenotypes as gpa1delta alone||
    236214||epistasis||ras1delta gpa11delta (technically both disruptions) same phenotypes as ras1delta alone||
     
    239217
    240218||PMID:10655214||
    241 ||orc 2 allele orp2-2, rad1-1||cut micr high temp||
    242 ||orc 2 allele orp2-2, rad3delta||cut micr high temp||
    243219||orc2delta||fypo:614 (facs; high temp) in germinating orc2delta spores from orp2-2/orc2delta::ura4 diploid (note difference from orc2delta phenotype if diploid was orc2+/orc2delta::ura4||
    244220||orc2delta||cut (micr; high temp) if from from orp2-2/orc2delta::ura4 diploid as above||
     
    247223[[BR]]
    248224
    249 ||PMID:10077566||
    250 ||orc4 gene exp||protein level constant throughout cell cycle||
    251 
    252 [[BR]]
    253 
    254225||PMID:2170029||
    255 ||ppa1::ura4+ + ppa2::ura4+||inviable||
    256 ||sds21::LEU2 + ppa1::ura4+||normal growth normal or high temp||
    257 ||sds21::LEU2 + ppa2::ura4+||normal growth normal or high temp||
    258 ||dis2::ura4+ + ppa2::ura4+||slow growth (small colonies) normal or high temp||
    259 ||dis2cs R245Q overexp + dis2+ on chr||slow growth std temp (restrictive)||
    260 ||dis2cs R245Q overexp + dis2::ura4+ on chr||inviable high (permissive) or std temp (restr)||
    261 ||dis2cs R245Q overexp + sds21::LEU2 on chr||slow growth std temp (restrictive)||
    262 ||dis2cs R245Q overexp + ppa1::ura4+ on chr||slow growth std temp (restrictive)||
    263 ||dis2cs R245Q overexp + ppa2::ura4+ on chr||slow growth std temp (restrictive)||
    264 ||dis2 gene exp||activity constant throughout cell cycle||
    265 ||ppa2 gene exp||activity constant throughout cell cycle||
    266 
    267 [[BR]]
    268 
    269 ||PMID:3185514||
    270 ||ran1/pat1-114 + byr1/ste1-(unknown)||same phenotypes as pat1-114 alone - conjugation & sporulation in haploid||
    271 ||ran1/pat1-114 + ste2-(unknown)||same phenotypes as pat1-114 alone - conjugation & sporulation in haploid||
    272 ||ran1/pat1-114 + byr1/ste3-(unknown)||same phenotypes as pat1-114 alone - conjugation & sporulation in haploid||
    273 ||ran1/pat1-114 + ste4-(unknown)||same phenotypes as pat1-114 alone - conjugation & sporulation in haploid||
    274 ||ran1/pat1-114 + ras1/ste5-(unknown)||sporulation in haploid as in pat1-114 alone, but no conjugation||
    275 ||ran1/pat1-114 + ste6-(unknown)||sporulation in haploid as in pat1-114 alone, but no conjugation||
    276 ||ran1/pat1-114 + ste7-(unknown)||same phenotypes as pat1-114 alone - conjugation & sporulation in haploid||
    277 ||ran1/pat1-114 + byr2/ste8-(unknown)||same phenotypes as pat1-114 alone - conjugation & sporulation in haploid||
    278 ||ran1/pat1-114 + srw1/ste9-(unknown)||same phenotypes as pat1-114 alone - conjugation & sporulation in haploid||
    279 ||ran1/pat1-114 + ste11/aff1-312(unknown)||sterile (and not ts as pat1-114 is); abol sporulation||
     226||dis2cs R245Q overexp + dis2+ on chr||slow growth std temp (restrictive) **still need to add this one, because wt endogenous not yet available||
     227||dis2 gene exp||activity constant throughout cell cycle (have annotated constant protein level)||
     228||ppa2 gene exp||activity constant throughout cell cycle (didn't look at protein)||
    280229
    281230[[BR]]