wiki:MidoriCuratedPapers

Version 5 (modified by gomidori, 10 years ago) (diff)

--

transferred from CuratorTrainingPapers


21813639
mcb1GO:0005737extension: throughout cell cycle (see nuclear pore/PMID:20970342 above)
mcb1GO:0005654extension: throughout cell cycle
mcb1GO:0000790extension: throughout cell cycle
mcb1-chk1 genetic interactionalleles OP-mcb1+chk1-deletion, mcb1-D2+chk1-deletion; mcb1-D22+chk1-deletionOP-mcb1+chk1-del phenotype small cells (FYPO:23), abnormal nuc morph (FYPO:62)
mcb1-rad3 genetic interactionalleles OP-mcb1+rad3-deletion, mcb1-D2+rad3-deletion; mcb1-D22+rad3-deletionOP-mcb1+rad3-del phenotype small cells (FYPO:23), abnormal nuc morph (FYPO:62)


20929775
hht1,hht2,hht3all 3 T3A (triple mutant)phenotype decreased prot loc to cen (extension: Ark1); lagging chromosomes (qualifier=low expressivity)
hta1,hta2both S121A (triple mutant)phenotype decreased prot loc to cen (extension: Ark1); lagging chromosomes (qualifier=low expressivity)
hht1,hht2,hht3,sgo2delall 3 hht T3A + sgo2del (quadruple mutant)phenotypes abolished loc to cen (ext Ark1); lagging chromosomes (qualifier=high expressivity)
hht1,hht2,hht3, hta1,hta2all 3 H3 T3A, both H2 S121A (quintuple mutant)phenotypes abolished loc to cen (ext Ark1); lagging chromosomes (qualifier=high expressivity)
hht1,hht2,hht3all 3 T3A (triple mutant)genetic interaction synthetic lethal sgo2deletion
hht1,hht2,hht3, hta1,hta2all 3 H3 T3A, both H2 S121A (quintuple mutant)genetic interaction synthetic lethal
hht1,hht2,hht3, hta1,hta2all 3 H3 T3A, both H2 S121A (quintuple mutant) genetic interaction synthetic lethal
genetic interactionhrk1, swi6"asynthetic"; check for old same-pathway GO IGI
hht1,hht2,hht3all 3 T3A (triple mutant)genetic interaction "asynthetic" with hrk1deletion
Hrk1-Bir1physical interactionBIR domain of Bir1 (Pfam:PF00653)
hrk1 bub1 genetic interactionalleles hrk1 deletion; bub1-KD (kinase dead, K762R,D900N)phenotype slow growth
hrk1 sgo2 genetic interactionalleles both deletionphenotype slow growth
pds5 bub1 genetic interactionalleles pds5 deletion; bub1-KD (kinase dead, K762R,D900N)phenotype slow growth
pds5 sgo2 genetic interactionalleles both deletionphenotype slow growth
swi6 sgo2 genetic interactionalleles both deletionphenotype slow growth


15777722
fhl1add phenotype FYPO:0000725
fhl1add evidence cell growth assay to viable
fhl1GO:0006355 change evidence to ISS with SGD:S000006308
fhl1GO:0000978 change evidence to ISS with Pfam:00498
fkh2add phenotype FYPO:0000681
fkh2add phenotype FYPO:0000726
fkh2add evidence cell growth assay to viable
fkh2add GO:0000978 ISS with Pfam:00498
fkh2GO:0000117 change evidence to IC, GO_REF:0000036, from GO:0000978|GO:0000086


21620704
dip1add FYPO:0000727
dip1add FYPO:0000728
dip1add FYPO:new abnormal protein localization to actin cortical patch SF 3453660
dip1add FYPO:new delayed actin cortical patch internalization SF 3453686
dip1add GO:new protein localization to actin cortical patch IMP SF 3453657; extensions localizes myo1, arc5
dip1add GO:new actin cortical patch internalization IMP SF 3453682
wsp1add FYPO:new abolished actin cortical patch internalization SF 3453686
wsp1add GO:new actin cortical patch internalization IMP SF 3453682
dip1 wsp1 genetic intalleles both deletionphenotypes: abnormal protein localization to actin cortical patch (crn1), abolished actin cortical patch internalization
how on earth to annotate anything based on figure 6?