Changes between Version 49 and Version 50 of Modification


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Timestamp:
Jan 27, 2015, 4:11:16 PM (6 years ago)
Author:
vw253
Comment:

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  • Modification

    v49 v50  
    2222Syntax for capturing the modified residue(s)
    2323     * residue=S204
    24      * residue=S204|S205|T206  *Question IS THIS CORRECT???
     24     * residue=S204,S205,T206 
    2525
    2626  * the residues numbers apply to the precursor translation, except for histones which are numbered assuming removal of the initiator methionine
    2727
    28   * By default residues reported will refer to the full length trasnlation. if the residues numbers you report refer to a modified (shortened) form (as in the case of histones) of the translation make sure that you request a pro ID for the shorter form, and put this in an annotation_extension has_direct_input(PR:xxxxx) so that the residues you specify matches the molecule in this extension.
     28  * By default residues reported will refer to the full length translation. if the residues numbers you report refer to a modified (shortened) form (as in the case of histones) of the translation make sure that you request a pro ID for the shorter form, and put this in an annotation_extension has_direct_input(PR:xxxxx) so that the residues you specify matches the molecule in this extension.
    2929 
    3030  * See [wiki:DescribingResidues describing residues modified or mutated] for "residue=" syntax  for more details of the residue describing syntax