Changes between Version 44 and Version 45 of OrthologInventoriesNoPom


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Timestamp:
Oct 2, 2014, 5:52:08 AM (6 years ago)
Author:
vw253
Comment:

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  • OrthologInventoriesNoPom

    v44 v45  
    144144  * there are also 64 essential genes in budding yeast which do not appear to have a fission yeast ortholog
    145145
    146  == Examples of distant orthologs not picked up by most ortholog predictors ==
    147 
    148   * Sfr1 / MEI5 http://pfam.sanger.ac.uk/family/PF10376 (conserved to human)
    149   * Rum1 / SIC1
    150   * ipk1 / IPK1 (orthoMcl only)
    151   * orc6 / ORC6 pfam.sanger.ac.uk/family/PF05460
    152   * APC13  / YDR260C http://pfam.sanger.ac.uk/protein/O74358
    153   * SPCC622.10c  -> A. gossypii AGL158C (fasta) which is is syntentic ortholog of S. cerevisiae YDR166C
    154   * rrn10/ RRN10 (small) (fungal only) http://pfam.sanger.ac.uk/family/PF05234
    155   * SPCC553.01c/ YGR042W  (to human) http://pfam.sanger.ac.uk/family/PF10382
    156   * Sds3 /YIL084C (KOGS only) http://pfam.sanger.ac.uk/family/PF08598
    157   * Swi5/SAE3 http://pfam.sanger.ac.uk/family/PF07061
    158   * Sus1/SUS1 (OrthoMcl only) http://pfam.sanger.ac.uk/family/PF10163
    159   * Mediator complex subunits (add details)
    160   * Atp15/ATP15 (KOGS only) http://pfam.sanger.ac.uk/family/PF04627
    161   * SPCC297.06c / YKL142W http://pfam.sanger.ac.uk/family/PF07957
    162   * See also ortholog table releases
    163 
     146