Changes between Version 52 and Version 53 of OrthologInventoriesNoPom


Ignore:
Timestamp:
Oct 2, 2014, 4:34:33 PM (6 years ago)
Author:
vw253
Comment:

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  • OrthologInventoriesNoPom

    v52 v53  
    8585  * FPS1 YLL043W (not sure about this)
    8686
     87=== Transmembrane Transporters ===
     88
     89  * FUN26 YAL022C (conserved in human SLC29A1,2,3,4)
     90  * YBR241C (from Compara)
     91  * YBR296C (from Compara)
     92  * YCR011C (from Compara)
     93  * YCR075C (from Compara)
     94  * YGL104C (from Compara)
     95  * YGR055W (from Compara)
     96  * YHL036W (from Compara)
     97  * YKL221W (from Compara)
     98  * YLR348C (from Compara)
     99  * YMR221C (from Compara)
     100  * YNL125C (from Compara)
     101  * YNL298W (from Compara)
     102  * YOL119C (from Compara)
     103  * YOR079C (from Compara)
     104  * YOR306C (from Compara)
     105  * YPL147W (from Compara)
     106  * YPR021C (from Compara)
     107 
     108
     109===  trancription and chromatin remodelleing complexes CHRAC and isw1-2 complexes ===
     110
     111  * ITC1  YGL133W CHRAC complex isw1-a  complex (conserved in human BAZ1A,B) (no compara)
     112  * YPL216W ITC1 paralog (uncharacterised) (conserved in human BAZ1A,B) (no compara)
     113  * ISW2  YOR304W CHRAC complex family so far only detected in yeast  http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10799:SF555
     114  *ISW1 YBR245C isw1-a/b  complex amily so far only detected in yeast  http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10799:SF555
     115  * IOC3 YFR013W isw1-a (PWWP domain) (no compara REMOVE?)
     116  * IOC4 YMR044W isw1-b (PWWP domain) (no compara REMOVE?)
     117  * HHO1 YPL127C histone H1  (conserved in human  H1F0)
     118  * YCL055W (from Compara)
     119  * YDR440W (from Compara)
     120  * YER040W (from Compara)
     121  * YGL096W (from Compara)
     122  * YGL254W (from Compara)
     123  * YGR040W (from Compara)
     124  * YJL056C (from Compara)
     125  * YKL068W (from Compara)
     126  * YKR034W (from Compara)
     127  * YKR099W (from Compara)
     128  * YMR164C (from Compara)
     129  * YNL239W (from Compara)
     130  * YPL177C (from Compara)
     131 
     132
    87133 === misc ===
    88134
     
    91137  * YPC1 YBR183W paralog YDC1 (conserved in human ACER3)
    92138  * YDC1 YPL087W paralog YPC1  (conserved in human ACER3)
    93   * HHO1 YPL127C histone H1  (conserved in human  H1F0)
    94139  * AML1   adenine methyltransferase, has human, (conserved in human  N6AMT2) http://pfam.xfam.org/family/PF10237?type=Family#tabview=tab7
    95140  * PDE2 YOR360C high affinity 3',5'-cAMP phosphodiesterase (family has human members, but no pombe member http://pfam.xfam.org/family/PF00233?type=Family#tabview=tab7)
     
    132177
    133178
    134  ===  CHRAC and isw1-2 complexes ===
    135 
    136   * ITC1  YGL133W CHRAC complex isw1-a  complex (conserved in human BAZ1A,B)
    137   * YPL216w ITC1 paralog (uncharacterised) (conserved in human BAZ1A,B)
    138   * ISW2  YOR304W CHRAC complex family so far only detected in yeast  http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10799:SF555
    139   * ISW1 YBR245C isw1-a/b  complex amily so far only detected in yeast  http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10799:SF555
    140  * IOC3 YFR013W isw1-a (PWWP domain)
    141  * IOC4 YMR044W isw1-b (PWWP domain)
    142 
    143  
    144  === Transporters ===
    145 
    146 * FUN26 YAL022C (conserved in human SLC29A1,2,3,4)
     179 
    147180
    148181 ==  To check==