Changes between Version 54 and Version 55 of OrthologInventoriesNoPom


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Timestamp:
Oct 2, 2014, 4:53:38 PM (6 years ago)
Author:
vw253
Comment:

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  • OrthologInventoriesNoPom

    v54 v55  
    7474 === Carbohydrate metabolic process ===
    7575
    76   * YDL174C (from Compara)
     76  * YDL174C (from Compara) 
    7777  * YDR109C (from Compara)
    7878  * YHL032C (from Compara)
     
    9393  * GDB1 YPR184W glycogen debranching enzyme (conserved in human AGL)
    9494 
    95   * FPS1 YLL043W (not sure about this)
    96 
    97 === Transmembrane Transporters ===
     95
     96 === Transmembrane Transporters ===
    9897
    9998  * FUN26 YAL022C (conserved in human SLC29A1,2,3,4)
     
    117116 
    118117
    119 ===  trancription and chromatin remodelleing complexes CHRAC and isw1-2 complexes ===
     118 ===  trancription and chromatin remodelleing complexes CHRAC and isw1-2 complexes ===
    120119
    121120  * ITC1  YGL133W CHRAC complex isw1-a  complex (conserved in human BAZ1A,B) (no compara)
     
    140139  * YPL177C (from Compara)
    141140 
     141 === signalling ===
     142  * YBR164C
     143  * YBR264C
     144  * YDL159W
     145  * YDR006C
     146  * YDR294C
     147  * YDR466W
     148  * YLR332W
     149  * YMR068W
     150  * YPL051W
     151
     152
     153 === Compara false positive ===
     154 
     155  * YLR087C (Compara false positive - yeast specific protein)
     156  * flocculin (deleted from slim, find)
    142157
    143158 === misc ===
    144 
    145   * YAT1 YAR035W carnitine O-acetyltransferase (conserved in human, CPT2)
    146  
     159 
    147160  * YPC1 YBR183W paralog YDC1 (conserved in human ACER3)
    148161  * YDC1 YPL087W paralog YPC1  (conserved in human ACER3)
     
    153166to check:
    154167  * SRN2 YLR119W Component of the ESCRT-I complex
     168
     169* FPS1 YLL043W (not sure about this)
    155170
    156171  === Mitochondrial ===
     
    185200  * BIO7 YHR214W-G (NOT IN 288C) pseudogenic, highly degraded
    186201  * BIO8 YHR214W-F  (NOT IN 288C) pseudogenic, highly degraded
    187 
    188 
    189  
    190202
    191203 ==  To check==
     
    222234  * there are also 64 essential genes in budding yeast which do not appear to have a fission yeast ortholog
    223235
    224 
    225