Changes between Version 62 and Version 63 of OrthologInventoriesNoPom
- Timestamp:
- Oct 3, 2014, 12:14:49 PM (7 years ago)
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OrthologInventoriesNoPom
v62 v63 4 4 === Lipid metabolic process (mainly fatty acid oxidation?) === 5 5 6 * YAT1 YAR035W carnitine O-acetyltransferase ( conserved inhuman, CPT2)7 * YBR041W (from compara)6 * YAT1 YAR035W carnitine O-acetyltransferase (human, CPT2) 7 * YBR041W (from Compara) 8 8 * EHT1 YBR177c medium-chain fatty acid metabolic process 9 9 * YDR287W (from Compara) … … 14 14 * POT1 (FOX3) YIL160C 15 15 * YJL153C (from Compara) 16 * TES1 YJR019C ( conserved in human,ACOT8)16 * TES1 YJR019C (human ACOT8) 17 17 * YLR118C (from Compara) 18 * ECI1 YLR284C ( conserved inhuman, PECI)19 * CAT2 YML042W ( conserved in human,CRAT)18 * ECI1 YLR284C (human, PECI) 19 * CAT2 YML042W (human CRAT) 20 20 * YMR210W similar to EEB1 and EHT1 medium-chain fatty acid metabolic process 21 * DCI1 YOR180C ( conserved in human,PECI)21 * DCI1 YOR180C (human PECI) 22 22 * YPL069C 23 23 * EEB1 YPL095c medium-chain fatty acid ethyl ester biosynthesis during fermentation 24 24 * YPL103C 25 * TAZ1 YPR140W TAfaZzin ( conserved inhuman , TAZ)25 * TAZ1 YPR140W TAfaZzin (human , TAZ) 26 26 27 27 28 28 === TMA (translation machinery associated) === 29 29 30 * TMA64 YDR117C ( conserved in human,LGTN)30 * TMA64 YDR117C (human LGTN) 31 31 * TMA7 YLR262C-A ribosome associated (human TMA7) http://pfam.xfam.org/family/PF09072?type=Family#tabview=tab7 (no pombe family member) could not find with tblastn 32 * STF2 YGR008C TMA10 paralog ( conserved inhuman SERBP1) (not in compara list)32 * STF2 YGR008C TMA10 paralog ( human SERBP1) (not in compara list) 33 33 * TMA10 YLR327C STF2 paralog ( conserved in human SERBP1) (not in compara list) 34 34 … … 52 52 === Tryptophan degradation/ de novo NAD biosynthesis === 53 53 54 * BNA1 YJR025c tryptophan met 3-hydroxyanthranilate 3,4-dioxygenase activity ( conserved inhuman HAAO)55 * BNA2 YJR078W tryptophan 2,3-dioxygenase activity ( conserved inhuman IDO2)56 * BNA4 YBL098W tryptophan met kynurenine 3-monooxygenase ( conserved in human,KMO)57 * BNA5 YLR231C tryptophan met kynureninase ( conserved in human,KYNU)58 * BNA6 YFR047C biosynthesis of NAD from tryptophan via kynurenine ( conserved in human,QPRT) (missing from compara)54 * BNA1 YJR025c tryptophan met 3-hydroxyanthranilate 3,4-dioxygenase activity (human HAAO) 55 * BNA2 YJR078W tryptophan 2,3-dioxygenase activity (human IDO2) 56 * BNA4 YBL098W tryptophan met kynurenine 3-monooxygenase (human KMO) 57 * BNA5 YLR231C tryptophan met kynureninase (human KYNU) 58 * BNA6 YFR047C biosynthesis of NAD from tryptophan via kynurenine (human QPRT) (missing from compara) 59 59 60 60 === Other cellular amino acid/derivative metabolic process === … … 70 70 * YMR020W (from Compara) 71 71 * YNL040W possible FP (from Compara) 72 * CYS4 YGR155W cystathionine beta-synthase ( conserved in human,CBS)72 * CYS4 YGR155W cystathionine beta-synthase (human CBS) 73 73 74 74 === Carbohydrate metabolic process === … … 85 85 === subset of carbohydrate , Glycogen metabolism === 86 86 87 * GLC3 YEL011W glycogen branching enzyme ( conserved inhuman GBE1)88 * GSY1 YFR015C ( conserved inhuman GYS1)87 * GLC3 YEL011W glycogen branching enzyme (human GBE1) 88 * GSY1 YFR015C (human GYS1) 89 89 * GLG2 YJL137C 90 90 * GLG1 YKR058W 91 * GSY2 YLR258W ( conserved inhuman GYS1)92 * GPH1 YPR160W glycogen debranching enzyme ( conserved inhuman PYGB)93 * GDB1 YPR184W glycogen debranching enzyme ( conserved inhuman AGL)91 * GSY2 YLR258W (human GYS1) 92 * GPH1 YPR160W glycogen debranching enzyme (human PYGB) 93 * GDB1 YPR184W glycogen debranching enzyme (human AGL) 94 94 95 95 96 96 === Transmembrane Transporters === 97 97 98 * FUN26 YAL022C ( conserved inhuman SLC29A1,2,3,4)98 * FUN26 YAL022C (human SLC29A1,2,3,4) 99 99 * YBR241C (from Compara) 100 100 * YBR296C (from Compara) … … 118 118 === trancription and chromatin remodelleing complexes CHRAC and isw1-2 complexes === 119 119 120 * ITC1 YGL133W CHRAC complex isw1-a complex ( conserved inhuman BAZ1A,B) (no compara)121 * YPL216W ITC1 paralog (uncharacterised) ( conserved inhuman BAZ1A,B) (no compara)120 * ITC1 YGL133W CHRAC complex isw1-a complex (human BAZ1A,B) (no compara) 121 * YPL216W ITC1 paralog (uncharacterised) (human BAZ1A,B) (no compara) 122 122 * IOC3 YFR013W isw1-a (PWWP domain) (no compara REMOVE?) 123 123 * IOC4 YMR044W isw1-b (PWWP domain) (no compara REMOVE?) 124 * HHO1 YPL127C histone H1 ( conserved inhuman H1F0)124 * HHO1 YPL127C histone H1 (human H1F0) 125 125 * YCL055W (from Compara) 126 126 * YDR440W (from Compara) … … 140 140 * ISW2 YOR304W CHRAC complex family confirmed by compara (FP?) 141 141 * YDR096W (from Compara) 142 * HOS1 YPR068C (from compara)142 * HOS1 YPR068C (from Compara) 143 143 144 144 === nucleocytoplsmic transport === … … 163 163 * YDR054C (from Compara) 164 164 * YGR109C (from Compara) 165 * OGG1 YML060W "CBF3 complex" base excision repair protein ( conserved inhuman OGG1)165 * OGG1 YML060W "CBF3 complex" base excision repair protein (human OGG1) 166 166 167 167 === replication === … … 198 198 === proteases === 199 199 200 * YCR045C (from Compara) 200 * YCR045C (from Compara) (REMOVE) 201 201 202 202 === proteasome assembly ===