Changes between Version 22 and Version 23 of PhenotypeImportExportFormats


Ignore:
Timestamp:
Jan 15, 2012, 9:09:05 PM (10 years ago)
Author:
val_wood
Comment:

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  • PhenotypeImportExportFormats

    v22 v23  
    1111||Penetrance|| %, range%, or small CV (did we say high/low)?||0 or 1||optional ||optional||
    1212||Expressivity|| integer/units AND|OR small CV (high/low)||0 or 1||optional ||optional||
    13 ||Background strain ID||972h- See ^6||
    14 
     13||Background strain ID||972h- See ^6||1||mandatory ||mandatory||
     14||Date ID||20120101||1||mandatory ||mandatory||
     15||Export only fields||
     16||Database||PomBase||1||optional ||mandatory||
    1517
    16181. Cardinality is one for single genes, >1 for multigenes. Q How should these be separated ? comma/pipe? need to be able to combine with allele description to make genotype, so should be colinear?
     
    24265. Currently a list, will be a vocabulary http://sourceforge.net/apps/trac/pombase/wiki/PhenotypeConditions\
    2527 
    26 6. Background strain, plus information about  changes (but not info in allele description?) including selectable markers to be used in genotype description...this will get complicated....will be used in construction of genotype? what happens with legacy data where we do't have this info without checking?
     286. Background strain, plus information about  changes (but not info in allele description?) including selectable markers to be used in genotype description...this will get complicated....will be used in construction of genotype? what happens with legacy data where we do't have this info without checking? syntax?
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