List any potential phenotype consistency checks
e.g.
- Only mutants with phenotype A and B should have GO term C
- All mutants with phenotype A and B should have phenotype term C
- mutants with only phenotype A should not have GO term x unless also have phenotype B etc.
- queries for inviability
- same allele/conditions combination can't be annotated to both viable cell and inviable cell
- same allele/conditions combination can only be annotated to viable cell population and inviable cell if the inviable cell annotation has a penetrance extension (and the extension doesn't say "full/100%")
- see if any cut are annotated as "viable" and then check if the correct penetrance qualifier is added
- see which elongated vegetative aspetate are viable /inviable and check corretc penetrance qualifiers
Last modified 3 weeks ago
Last modified on Feb 15, 2021, 8:12:02 PM