Changes between Initial Version and Version 1 of PombasePlanningMeetingAgenda20131009


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Timestamp:
Oct 8, 2013, 5:40:23 AM (8 years ago)
Author:
val_wood
Comment:

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  • PombasePlanningMeetingAgenda20131009

    v1 v1  
     1= !PomBase Planning Meeting 09 Oct 2013 =
     2
     3  Cambridge - Meeting Room ???, EBI
     4
     5= Action item review =
     6
     7
     8
     9 == Postponed Action Items ==
     10 == Outstanding action items carried forward from previous meeting  ==
     11== Action items from **** ==
     12 
     13
     14= New (and continuing) Agenda items =
     15
     16     
     17
     18 == Hosting high throughput datasets ==
     19
     20 == Priority Jira tickets ==
     21
     22   
     23 == Chado ==
     24 
     25
     26 == Usage stats ==
     27
     28 http://tinyurl.com/7qs2zap
     29
     30 == Versioning ==
     31 
     32
     33 == Website ==
     34
     35
     36 == Phenotype ontology ==
     37
     38 == Canto ==
     39
     40 == Other general issues ==
     41
     42 == Helpdesk ==
     43
     44 == Curation ==
     45
     46 === Update on community curation ===
     47
     48 ===  Literature (triage) status ===
     49 
     50||Item||March meeting||April meeting|| May meeting || July 3||
     51||All publications||9755||9761||9773|| 9935 ||
     52||Un-triaged publications||0||4||2|| 1 ||
     53||Curatable publications||4735||4740|| 4780|| 4877 ||
     54||Publications with Approved sessions||580||600|| 647|| 674||
     55||Publications with active sessions||245||247|| 265|| 249||
     56||Publications with session needing approval||14||4|| 4||16||
     57|| community curatable publications ||- ||-||-|| 262 ||
     58|| community curated publications with approved sessions||- ||-||-|| 31 ||
     59
     60 === Canto annotations (from 2013-??-??) ===
     61
     62||name||March count||April count||May count||July count
     63||PSI-MOD||77||77||77||78
     64||molecular_function||167||173||182||204
     65||cellular_component||211||245||272||353
     66||biological_process||838||893||927||944
     67||!PomBase annotation extension terms||1448||1605||1651||1938
     68||fission_yeast_phenotype||3519||3820||3879||4464
     69||Total||6260||6813||6988||7981
     70
     71 === All annotation types ===
     72
     73||name||count
     74||DNA_binding_specificity||
     75||cat_act||
     76||ex_tools||
     77||subunit_composition||
     78||pathway||
     79||gene_ex||
     80||m_f_g||
     81||complementation||
     82||genome_org||
     83||misc||
     84||disease_associated||
     85||name_description||
     86||EC numbers||
     87||sequence||
     88||warning||
     89||!PomBase family or domain||
     90||PSI-MOD||
     91||!PomBase gene characterisation status||
     92||!PomBase gene products||
     93||molecular_function||
     94||biological_process||
     95||cellular_component||
     96||fission_yeast_phenotype||
     97||species_dist||
     98||!PomBase annotation extension terms||
     99||Total||
     100
     101(last month's total was )
     102
     103== Next priorities ==
     104
     105== Publications ==
     106
     107== Meetings ==
     108
     109== News and Outreach ==
     110
     111== Next planning meeting ==
     112
     113= AOB =
     114