PomBase Planning Meeting 09 Oct 2013

Cambridge - Meeting Room ???, EBI

Action item review

Postponed Action Items

Outstanding action items carried forward from previous meeting

Action items from

New (and continuing) Agenda items

Hosting high throughput datasets

Priority Jira tickets

Chado

Usage stats

​http://tinyurl.com/7qs2zap

Versioning

Website

Phenotype ontology

Canto

Other general issues

Helpdesk

Curation

Update on community curation

Literature (triage) status

Item	March meeting	April meeting	May meeting	July 3
All publications	9755	9761	9773	9935
Un-triaged publications	0	4	2	1
Curatable publications	4735	4740	4780	4877
Publications with Approved sessions	580	600	647	674
Publications with active sessions	245	247	265	249
Publications with session needing approval	14	4	4	16
community curatable publications	-	-	-	262
community curated publications with approved sessions	-	-	-	31

Canto annotations (from 2013-??-??)

name	March count	April count	May count	July count
PSI-MOD	77	77	77	78
molecular_function	167	173	182	204
cellular_component	211	245	272	353
biological_process	838	893	927	944
PomBase annotation extension terms	1448	1605	1651	1938
fission_yeast_phenotype	3519	3820	3879	4464
Total	6260	6813	6988	7981

All annotation types

name	count
DNA_binding_specificity
cat_act
ex_tools
subunit_composition
pathway
gene_ex
m_f_g
complementation
genome_org
misc
disease_associated
name_description
EC numbers
sequence
warning
PomBase family or domain
PSI-MOD
PomBase gene characterisation status
PomBase gene products
molecular_function
biological_process
cellular_component
fission_yeast_phenotype
species_dist
PomBase annotation extension terms
Total

(last month's total was )

Next priorities

Publications

Meetings

News and Outreach

Next planning meeting

AOB