Changes between Version 1 and Version 2 of PombasePlanningMeetingAgenda20140122


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Timestamp:
Jan 20, 2014, 4:07:26 PM (8 years ago)
Author:
val_wood
Comment:

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  • PombasePlanningMeetingAgenda20140122

    v1 v2  
    99
    1010 == Postponed Action Items ==
     11
     12None, all are now on relevant trackers
     13
    1114 == Outstanding action items carried forward from previous meeting  ==
    12 == Action items from **** ==
     15
     16None, all are now pon relevant trackers
     17
     18== Action items from Nov ==
    1319 
     20 AI: Ensembl to look toward a better format to represent data which is presented at the single nucleotide level and cannot be indexed
     21 AI: Mark put the contig/gene view above the above the data tracks
     22 AI: Mark to zoom out detail browser view once to include context around gene
     23 AI: MArk Add NCBI blast link with protein sequence submission side by side with ensembl blast (at least until a usable blast facility is available)
     24 AI: Midori to email to ask for data resubmissions (DONE).
     25 AI: Val to email Paco for nucleosome positioning data (DONE).
     26 AI: Val ask Paul Thomas /CJM to explain details of modular/LEGO annotation
     27 AI: Val to Summarize tasks need to be done for the grant proposal. 
     28
    1429
    1530= New (and continuing) Agenda items =
    1631
     32 * Speed
     33   * (ETA around a month?) a new track loader where data is combined so that loading is quicker. (progess?)
     34   
    1735     
    1836
    1937 == Hosting high throughput datasets ==
    2038
     39  Quite a few datasets now uploaded ready to host
     40  Paco Antequera https://www.ebi.ac.uk/panda/jira/browse/PB-1680
     41  Nick Rhind, replication origins https://www.ebi.ac.uk/panda/jira/browse/PB-1513 have we got this?
     42  Jurg's polyA data https://www.ebi.ac.uk/panda/jira/browse/PB-1513
     43  Nick Rhind transcriptome https://www.ebi.ac.uk/panda/jira/browse/PB-1707
     44 
    2145 == Priority Jira tickets ==
    2246
    23    
     47  27 tickets open for V 40
     48  https://www.ebi.ac.uk/panda/jira/issues/?jql=project%20%3D%20PB%20AND%20resolution%20%3D%20Unresolved%20AND%20fixVersion%20%3D%20%22Chado%20v40%22%20ORDER%20BY%20priority%20DESC
     49 
     50  We should go through these and assess 
     51
     52 
    2453 == Chado ==
    2554