Changes between Version 17 and Version 18 of PombasePlanningMeetingAgenda201402


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Timestamp:
Mar 10, 2015, 3:28:18 PM (6 years ago)
Author:
vw253
Comment:

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  • PombasePlanningMeetingAgenda201402

    v17 v18  
    2424    * Problem: For example FungiDB use a descriptions  gff file from PomBase, as the main input but this only records the Schizosaccharomyces_pombe.ASM294v2.25.gff3.gz
    2525    which does not change even thought the annotation changes between PomBase versions as time goes on the gene build becomes more static but the annotation changes more. Need a way to capture the annotation version in the gff versioning.
     26   * From Midori: the build number in the table has never corresponded to the number embedded in the GFF file names. According to the Jira ticket, "2.1" was the build number for at least chado versions 38-40, and the GFF files nearest those dates include 2.20 and 2.21.
    2627
    2728  *  Has the new Ensembl Web-person person been appointed? Is the browser overhaul in progress? (Re Paul will ensure that that the Ensembl browser developers get the PomBase? suggestions before the browser overhaul)