| | 41 | |
| | 42 | * Do Ensembl have any plans how to handle chromosome interaction data http://nar.oxfordjournals.org/content/42/20/12585.full |
| | 43 | * We had a little discussion about this and Mark suggested |
| | 44 | * In the supplementary file there is an image of the all against all for the likelihood of interaction. It would be possible to have a track that would be a frequency of interaction (irrespective of target), which could be displayed as a gradient track. Then have 3 tracks for each phase of the cell cycle that they analysed |
| | 45 | * Your other option would be a custom display on the PomBase site using a chord style diagram for regions using colour and thickness to represent the frequency of interaction between 2 positions (eg |
| | 46 | Chr1:X0-X1==Chr1:Y0-Y1 or Chr1:A0-A1==Chr2:B0-B1). Then have a representation for each phase measured. This would have the advantage of representing a flattened 3D structure and act to give context to the user. |
