Changes between Version 3 and Version 4 of PombeGeneLosses


Ignore:
Timestamp:
Oct 3, 2014, 3:22:10 PM (6 years ago)
Author:
vw253
Comment:

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Legend:

Unmodified
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  • PombeGeneLosses

    v3 v4  
    3434  * STF2 YGR008C  TMA10 paralog ( human SERBP1) (not  in compara list)
    3535  * TMA10 YLR327C STF2 paralog ( conserved in human SERBP1)  (not in compara list)
    36 
     36  *  YER176W
    3737
    3838 === Nucleobase containing small molecule met  ===
     
    9696
    9797  === Transmembrane Transporters ===
    98 
     98  * PFA4 YOL003C
     99  * AVT1 YJR001C
     100  * AVT2 YEL064C
    99101  * FUN26 YAL022C (human SLC29A1,2,3,4)
    100102  * YBR241C (from Compara)
     
    117119  * YPR192W  AQY1 (from Compara)
    118120  * PXA2 YKL188C (possible human ABCD4)
     121 * YLL052C AQY2
     122 * YLL053C
    119123 
    120124
     
    209213
    210214  * YCR045C (from Compara) (REMOVE?)
    211  
     215  * YCL057W  (from Compara)
     216  * YFR006W  (from Compara)
     217  * YOL057W
     218 
    212219  === Proteasome assembly ===
    213220
     
    222229  * KXD1 YGL079W BLOC-1 complex (conserved in human KXD1)
    223230  * SNN1 YNL086W  BLOC-1 complex (conserved in human SNAPIN & BLOC1S6)
     231  * YKR013W (from Compara)
    224232 
    225233  === Unknown process ===
     
    243251  * YPL162C
    244252  * YJL132W
    245  
    246   === Compara false positive ===
     253  * YFR016C
     254  * YFR018C
     255 * YGR001C 
     256 * YHL021C
     257 *  YJL078C
     258 *  YJL079C
     259 * YMR114C
     260* YMR110C
     261
     262
     263=== Compara false positive ===
    247264 
    248265  * YLR087C (Compara false positive - yeast specific protein)
     
    263280  * YJL073W possible fp, dnaj 
    264281  * FPS1 YLL043W (not sure about this)
    265 
     282  * YHR121W
     283  * YJL068C
     284 * YJR151C
     285 * YBL064C