Changes between Version 55 and Version 56 of RelationsAndTransitivity


Ignore:
Timestamp:
Mar 9, 2015, 3:40:49 PM (6 years ago)
Author:
vw253
Comment:

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  • RelationsAndTransitivity

    v55 v56  
    2828'''Examples:'''
    2929  * '''A.''' FYPO:0002797 decreased protein degradation '''has_output B''' FYPO:0000836 increased protein level
    30   * '''A.''' FYPO:0001009 'abolished actomyosin contractile ring assembly'  '''has_output B''' FYPO:actomyosin contractile ring absent
    31 Annotations should propagate over '''has_output''' ('''A has_output B''' : all of A should annotated to B)
    32   * i.e. In the PomBase Query builder all '''FYPO:0002797 decreased protein degradation''' should be annotated to '''FYPO:0000836 increased protein level'''
     30  * '''A.''' FYPO:0001009 abolished actomyosin contractile ring assembly  '''has_output B''' FYPO:0001008 actomyosin contractile ring absent
     31Annotations should propagate over '''has_output''' ('''A has_output B''' : all of A should annotated to B), i.e in the PomBase Query builder:
     32  * All '''FYPO:0002797 decreased protein degradation''' should be annotated to '''FYPO:0000836 increased protein level'''
     33  * All ''' FYPO:0001009 abolished actomyosin contractile ring assembly' should be annotated to  ''' FYPO:0001008 actomyosin contractile ring absent'''
    3334
    3435In Canto we should see the '''has_output''' related terms as ancestors
    35   * i.e.    '''FYPO:0000836 increased protein level''' should be visible as a ancestor of ''' FYPO:0002797 decreased protein degradation'''
    36 
     36  * i.e.    '''FYPO:0002797 decreased protein degradation''' should be visible as a descendent  '''FYPO:0000836 increased protein level'''
     37  * i.e.    '''FYPO:abolished actomyosin contractile ring assembly''' should be visible as a descendent  of '''FYPO:0001008 actomyosin contractile ring absent'''
    3738[[br]]
    3839[[br]]